BLASTX nr result
ID: Papaver32_contig00028527
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver32_contig00028527
(704 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EOY27291.1 Small nuclear ribonucleoprotein family protein isofor... 79 1e-22
KVI05858.1 Like-Sm (LSM) domain-containing protein [Cynara cardu... 82 8e-22
XP_019223548.1 PREDICTED: sm-like protein LSM1B isoform X2 [Nico... 77 1e-20
XP_019097094.1 PREDICTED: sm-like protein LSM1B isoform X2 [Came... 85 1e-17
NP_001326378.1 Small nuclear ribonucleoprotein family protein [A... 85 1e-17
XP_010487194.1 PREDICTED: sm-like protein LSM1B isoform X1 [Came... 85 2e-17
NP_566476.1 Small nuclear ribonucleoprotein family protein [Arab... 85 2e-17
KJB57033.1 hypothetical protein B456_009G145700 [Gossypium raimo... 84 4e-17
XP_006298813.1 hypothetical protein CARUB_v10014920mg [Capsella ... 84 4e-17
XP_010041873.1 PREDICTED: sm-like protein LSM1B, partial [Eucaly... 83 4e-17
AFK48998.1 unknown [Lotus japonicus] 82 5e-17
GAV64766.1 LSM domain-containing protein [Cephalotus follicularis] 84 7e-17
JAU09973.1 Sm-like protein LSM1B [Noccaea caerulescens] JAU37039... 84 7e-17
XP_017442402.1 PREDICTED: sm-like protein LSM1B [Vigna angularis... 84 7e-17
XP_014516657.1 PREDICTED: sm-like protein LSM1B [Vigna radiata v... 84 7e-17
XP_012444399.1 PREDICTED: sm-like protein LSM1B [Gossypium raimo... 84 7e-17
XP_010939893.1 PREDICTED: sm-like protein LSM1B [Elaeis guineensis] 84 7e-17
XP_010937317.1 PREDICTED: sm-like protein LSM1B [Elaeis guineensis] 84 7e-17
XP_016749609.1 PREDICTED: sm-like protein LSM1B [Gossypium hirsu... 84 7e-17
XP_008802479.1 PREDICTED: sm-like protein LSM1B [Phoenix dactyli... 84 7e-17
>EOY27291.1 Small nuclear ribonucleoprotein family protein isoform 2 [Theobroma
cacao]
Length = 110
Score = 79.3 bits (194), Expect(2) = 1e-22
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = -2
Query: 463 GPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
GPE+I+LSTSLASYLD+KLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 5 GPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAV 47
Score = 55.8 bits (133), Expect(2) = 1e-22
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = -1
Query: 320 AAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
AAEI+RAQKAER+A DLKG+MRKRMEFLD+D
Sbjct: 80 AAEIRRAQKAEREARDLKGTMRKRMEFLDLD 110
>KVI05858.1 Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
scolymus]
Length = 107
Score = 82.4 bits (202), Expect(2) = 8e-22
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+I+LSTSLASYLD+KLL+LLRDGRKL+G+LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAV 47
Score = 49.7 bits (117), Expect(2) = 8e-22
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1
Query: 302 AQKAERDATDLKGSMRKRMEFLDMD 228
AQK ER+ATDLKGSMRKRMEFLDMD
Sbjct: 83 AQKVEREATDLKGSMRKRMEFLDMD 107
>XP_019223548.1 PREDICTED: sm-like protein LSM1B isoform X2 [Nicotiana attenuata]
Length = 107
Score = 77.0 bits (188), Expect(2) = 1e-20
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW PE+I+ STSLASYLD+KLL+LLRDGRKL+G LRSFDQFANAV
Sbjct: 1 MSWAS-PEDIYTSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAV 47
Score = 51.2 bits (121), Expect(2) = 1e-20
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1
Query: 302 AQKAERDATDLKGSMRKRMEFLDMD 228
AQKAER+ATDLKGSMRKRMEFLDMD
Sbjct: 83 AQKAEREATDLKGSMRKRMEFLDMD 107
>XP_019097094.1 PREDICTED: sm-like protein LSM1B isoform X2 [Camelina sativa]
Length = 98
Score = 84.7 bits (208), Expect = 1e-17
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PEEI+LSTSLASYLDRKLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 1 MSWAG-PEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAV 47
>NP_001326378.1 Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana] ANM64342.1 Small nuclear ribonucleoprotein
family protein [Arabidopsis thaliana]
Length = 98
Score = 84.7 bits (208), Expect = 1e-17
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PEEI+LSTSLASYLDRKLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 1 MSWAG-PEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAV 47
>XP_010487194.1 PREDICTED: sm-like protein LSM1B isoform X1 [Camelina sativa]
Length = 128
Score = 84.7 bits (208), Expect = 2e-17
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PEEI+LSTSLASYLDRKLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 1 MSWAG-PEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAV 47
Score = 53.9 bits (128), Expect = 8e-06
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = -1
Query: 326 VSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
VS AEIKRAQK ER+A++L+G+MRKRMEFLD D
Sbjct: 96 VSEAEIKRAQKVEREASELRGTMRKRMEFLDFD 128
>NP_566476.1 Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana] NP_850580.1 Small nuclear ribonucleoprotein
family protein [Arabidopsis thaliana] XP_010501611.1
PREDICTED: sm-like protein LSM1B [Camelina sativa]
XP_010465290.1 PREDICTED: sm-like protein LSM1B
[Camelina sativa] Q8LFL8.1 RecName: Full=Sm-like protein
LSM1B; Short=AtLSM1b AAM61336.1 Sm protein, putative
[Arabidopsis thaliana] AAO22620.1 putative Sm protein
[Arabidopsis thaliana] AAO42334.1 putative Sm protein
[Arabidopsis thaliana] AEE75465.1 Small nuclear
ribonucleoprotein family protein [Arabidopsis thaliana]
AEE75466.1 Small nuclear ribonucleoprotein family
protein [Arabidopsis thaliana] OAP03955.1 LSM1B
[Arabidopsis thaliana]
Length = 128
Score = 84.7 bits (208), Expect = 2e-17
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PEEI+LSTSLASYLDRKLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 1 MSWAG-PEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAV 47
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -1
Query: 329 RVSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
RVS AEIKRAQK ER+A++L+G+MRKRMEFLD D
Sbjct: 95 RVSEAEIKRAQKVEREASELRGTMRKRMEFLDFD 128
>KJB57033.1 hypothetical protein B456_009G145700 [Gossypium raimondii]
Length = 106
Score = 83.6 bits (205), Expect = 4e-17
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+I+LSTSLASYLDRKLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAV 47
>XP_006298813.1 hypothetical protein CARUB_v10014920mg [Capsella rubella]
EOA31711.1 hypothetical protein CARUB_v10014920mg
[Capsella rubella]
Length = 107
Score = 83.6 bits (205), Expect = 4e-17
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+I+LSTSLASYLDRKLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAV 47
>XP_010041873.1 PREDICTED: sm-like protein LSM1B, partial [Eucalyptus grandis]
Length = 100
Score = 83.2 bits (204), Expect = 4e-17
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+++LSTSLASYLD+KLL+LLRDGRKLMG+LRSFDQFANAV
Sbjct: 1 MSWAG-PEDVYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAV 47
>AFK48998.1 unknown [Lotus japonicus]
Length = 80
Score = 82.4 bits (202), Expect = 5e-17
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+I+LSTSLASYLD+KLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAV 47
>GAV64766.1 LSM domain-containing protein [Cephalotus follicularis]
Length = 128
Score = 83.6 bits (205), Expect = 7e-17
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G P+E+FLSTSLASYLD+KLL+LLRDGRKLMGLLRSFDQFAN V
Sbjct: 1 MSWAG-PDEVFLSTSLASYLDKKLLVLLRDGRKLMGLLRSFDQFANVV 47
Score = 58.2 bits (139), Expect = 2e-07
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -1
Query: 329 RVSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
RVS EIK AQKAER+ATDLKGSMRKRMEFLD D
Sbjct: 95 RVSVEEIKGAQKAEREATDLKGSMRKRMEFLDYD 128
>JAU09973.1 Sm-like protein LSM1B [Noccaea caerulescens] JAU37039.1 Sm-like
protein LSM1B [Noccaea caerulescens] JAU58571.1 Sm-like
protein LSM1B [Noccaea caerulescens] JAU77658.1 Sm-like
protein LSM1B [Noccaea caerulescens]
Length = 128
Score = 83.6 bits (205), Expect = 7e-17
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+I+LSTSLASYLDRKLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 1 MSWSG-PEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAV 47
Score = 54.3 bits (129), Expect = 6e-06
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 329 RVSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
RVS EIKRAQK ER+A++L+G+MRKRMEFLD D
Sbjct: 95 RVSETEIKRAQKVEREASELRGTMRKRMEFLDFD 128
>XP_017442402.1 PREDICTED: sm-like protein LSM1B [Vigna angularis] BAT98276.1
hypothetical protein VIGAN_09191900 [Vigna angularis
var. angularis]
Length = 128
Score = 83.6 bits (205), Expect = 7e-17
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+I+LSTSLASYLD+KLL+LLRDGRKLMG+LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAV 47
Score = 58.9 bits (141), Expect = 1e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = -1
Query: 329 RVSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
RVS AEIKRAQKAER+A+DLKG+MRKRMEFLD +
Sbjct: 95 RVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFE 128
>XP_014516657.1 PREDICTED: sm-like protein LSM1B [Vigna radiata var. radiata]
Length = 128
Score = 83.6 bits (205), Expect = 7e-17
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+I+LSTSLASYLD+KLL+LLRDGRKLMG+LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAV 47
Score = 60.5 bits (145), Expect = 3e-08
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -1
Query: 329 RVSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
RVS AEIKRAQKAER+A+DLKG+MRKRMEFLD D
Sbjct: 95 RVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
>XP_012444399.1 PREDICTED: sm-like protein LSM1B [Gossypium raimondii]
XP_016688390.1 PREDICTED: sm-like protein LSM1B
[Gossypium hirsutum] KJB57031.1 hypothetical protein
B456_009G145700 [Gossypium raimondii]
Length = 128
Score = 83.6 bits (205), Expect = 7e-17
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+I+LSTSLASYLDRKLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAV 47
Score = 58.2 bits (139), Expect = 2e-07
Identities = 27/33 (81%), Positives = 32/33 (96%)
Frame = -1
Query: 326 VSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
VS AEI+RAQKAER+ATDLKG+MRKRMEFLD++
Sbjct: 96 VSVAEIRRAQKAEREATDLKGTMRKRMEFLDLE 128
>XP_010939893.1 PREDICTED: sm-like protein LSM1B [Elaeis guineensis]
Length = 128
Score = 83.6 bits (205), Expect = 7e-17
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+IFLSTSLASYLD+KLL+LLRDGRKL+G+LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAV 47
Score = 63.9 bits (154), Expect = 2e-09
Identities = 31/33 (93%), Positives = 33/33 (100%)
Frame = -1
Query: 326 VSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
VSAAEI+RAQKAERDATDLKGSMRKRMEFLD+D
Sbjct: 96 VSAAEIRRAQKAERDATDLKGSMRKRMEFLDLD 128
>XP_010937317.1 PREDICTED: sm-like protein LSM1B [Elaeis guineensis]
Length = 128
Score = 83.6 bits (205), Expect = 7e-17
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+IFLSTSLASYLD+KLL+LLRDGRKL+G+LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAV 47
Score = 63.9 bits (154), Expect = 2e-09
Identities = 31/33 (93%), Positives = 33/33 (100%)
Frame = -1
Query: 326 VSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
VSA+EIKRAQKAERDATDLKGSMRKRMEFLD+D
Sbjct: 96 VSASEIKRAQKAERDATDLKGSMRKRMEFLDLD 128
>XP_016749609.1 PREDICTED: sm-like protein LSM1B [Gossypium hirsutum]
XP_017606755.1 PREDICTED: sm-like protein LSM1B
[Gossypium arboreum] KHG18956.1 U6 snRNA-associated
Sm-like protein LSm1 [Gossypium arboreum]
Length = 128
Score = 83.6 bits (205), Expect = 7e-17
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+I+LSTSLASYLDRKLL+LLRDGRKLMG LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAV 47
Score = 59.7 bits (143), Expect = 6e-08
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = -1
Query: 326 VSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
VS AEI+RAQKAER+ATDLKG+MRKRMEFLD+D
Sbjct: 96 VSVAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128
>XP_008802479.1 PREDICTED: sm-like protein LSM1B [Phoenix dactylifera]
XP_008802480.1 PREDICTED: sm-like protein LSM1B [Phoenix
dactylifera]
Length = 128
Score = 83.6 bits (205), Expect = 7e-17
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -2
Query: 478 MSWGGGPEEIFLSTSLASYLDRKLLILLRDGRKLMGLLRSFDQFANAV 335
MSW G PE+IFLSTSLASYLD+KLL+LLRDGRKL+G+LRSFDQFANAV
Sbjct: 1 MSWAG-PEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAV 47
Score = 63.9 bits (154), Expect = 2e-09
Identities = 31/33 (93%), Positives = 33/33 (100%)
Frame = -1
Query: 326 VSAAEIKRAQKAERDATDLKGSMRKRMEFLDMD 228
VSAAEI+RAQKAERDATDLKGSMRKRMEFLD+D
Sbjct: 96 VSAAEIRRAQKAERDATDLKGSMRKRMEFLDLD 128