BLASTX nr result

ID: Papaver32_contig00027318 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00027318
         (1079 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006381742.1 hypothetical protein POPTR_0006s16970g, partial [...    57   3e-06
GAV84728.1 DUF4283 domain-containing protein, partial [Cephalotu...    56   4e-06
GAV88568.1 DUF4283 domain-containing protein, partial [Cephalotu...    55   8e-06

>XP_006381742.1 hypothetical protein POPTR_0006s16970g, partial [Populus
           trichocarpa] ERP59539.1 hypothetical protein
           POPTR_0006s16970g, partial [Populus trichocarpa]
          Length = 167

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/66 (39%), Positives = 37/66 (56%)
 Frame = -3

Query: 225 IRPWSPLVEQMVEDLKTIPVWFTLRKIPMFM*NQKGIGIIASYLGIPLMTDKKTFERSLM 46
           IR W+P ++   +DL  IPVW  L  +P+     KG+G +AS LG+PL  D  T  R  +
Sbjct: 42  IRHWTPNMQFSKDDLSRIPVWIKLYHVPLEYWTNKGLGYVASALGVPLHVDVTTLMRKRL 101

Query: 45  NYKSLC 28
            Y  +C
Sbjct: 102 TYARVC 107


>GAV84728.1 DUF4283 domain-containing protein, partial [Cephalotus
           follicularis]
          Length = 145

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/68 (41%), Positives = 39/68 (57%)
 Frame = -3

Query: 225 IRPWSPLVEQMVEDLKTIPVWFTLRKIPMFM*NQKGIGIIASYLGIPLMTDKKTFERSLM 46
           +R WS  +   +ED K+IPVW  L KIP+    + G+  IAS LG PL  D  T  R ++
Sbjct: 18  LRKWSRGMSLTLEDCKSIPVWVKLSKIPVQFWTKMGLSYIASVLGKPLHMDLSTMNRYVL 77

Query: 45  NYKSLC*D 22
           N+  +C D
Sbjct: 78  NFARVCID 85


>GAV88568.1 DUF4283 domain-containing protein, partial [Cephalotus
           follicularis]
          Length = 146

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/66 (37%), Positives = 38/66 (57%)
 Frame = -3

Query: 225 IRPWSPLVEQMVEDLKTIPVWFTLRKIPMFM*NQKGIGIIASYLGIPLMTDKKTFERSLM 46
           +RPWS  +   +ED K+IPVW  L+ +P+F  N+ G+  IAS +G PL     T  R  +
Sbjct: 50  LRPWSKSMACSLEDCKSIPVWVKLKNVPVFYWNKVGLSYIASVIGRPLHMAASTTNRYAL 109

Query: 45  NYKSLC 28
            +  +C
Sbjct: 110 TFARVC 115


Top