BLASTX nr result

ID: Papaver32_contig00024989 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00024989
         (483 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010266938.1 PREDICTED: F-box protein SKIP23-like [Nelumbo nuc...    62   3e-08
XP_002313690.1 hypothetical protein POPTR_0009s14200g [Populus t...    52   9e-06
XP_002305539.2 hypothetical protein POPTR_0004s18630g [Populus t...    52   9e-06

>XP_010266938.1 PREDICTED: F-box protein SKIP23-like [Nelumbo nucifera]
          Length = 409

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
 Frame = +3

Query: 3   PMFGGCLKCLLESDGELLMFEKYLST------CNDHNDGPLVVQSDLYITESTVCLKVYK 164
           P+FGG  K L+ES+G+LL+ + YLS        N+ ++  +    D YI E TV  +V+K
Sbjct: 239 PVFGGDKKFLVESEGDLLLVDMYLSVGPDDDPNNNEDEDAIFGHIDSYIIEKTVKFEVFK 298

Query: 165 LN*DLQNWVKLEAW--MLCFILW*QLLISASAPDFQGVKQ---------INSTDKQWKRW 311
           L+   Q WV +++    L F L      SASA DF G K           +S  ++    
Sbjct: 299 LDPGRQKWVSMKSLGDRLLF-LGDNCSFSASASDFAGCKGNCIYFTDNFFHSNGEEDGAP 357

Query: 312 CICTDIDVFNF*HGSVGPLS 371
            +  DI VFN   GS+GPL+
Sbjct: 358 FMDHDIGVFNLEDGSIGPLA 377


>XP_002313690.1 hypothetical protein POPTR_0009s14200g [Populus trichocarpa]
           EEE87645.1 hypothetical protein POPTR_0009s14200g
           [Populus trichocarpa]
          Length = 410

 Score = 52.4 bits (124), Expect(2) = 9e-06
 Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
 Frame = +3

Query: 3   PMFGGCLKCLLESDGELLMFEKYLSTCNDH--NDGPLVVQSDL--YITESTVCLKVYKLN 170
           P+FGG  K L+ES G+LL+ + YLS   D   + G  VVQ DL  Y++E TV  KV+KLN
Sbjct: 239 PVFGGDKKYLVESKGDLLLVDMYLSIDTDEGLSIGNDVVQ-DLVQYMSERTVRFKVFKLN 297

Query: 171 *DLQNWVK---LEAWMLCFILW*QLLISASAPDFQGVKQ---------INSTDKQWKRWC 314
            + ++W++   LE  +L   L      SASA +  G K            S ++      
Sbjct: 298 EEGKSWIEVKNLEDRVL--FLGDDSTFSASASELSGCKGNCIFFEDNFFYSREEGDDGSM 355

Query: 315 ICTDIDVFNF*HGSVGPL 368
           I  DI VF    G +GPL
Sbjct: 356 IGRDIGVFELESGCIGPL 373



 Score = 24.3 bits (51), Expect(2) = 9e-06
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 388 SQLFWLPPAWVSDVTI 435
           S++FW PP W++  ++
Sbjct: 380 SKMFWPPPDWIASTSL 395


>XP_002305539.2 hypothetical protein POPTR_0004s18630g [Populus trichocarpa]
           XP_006384594.1 hypothetical protein POPTR_0004s18630g
           [Populus trichocarpa] EEE86050.2 hypothetical protein
           POPTR_0004s18630g [Populus trichocarpa] ERP62391.1
           hypothetical protein POPTR_0004s18630g [Populus
           trichocarpa]
          Length = 410

 Score = 52.0 bits (123), Expect(2) = 9e-06
 Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 16/138 (11%)
 Frame = +3

Query: 3   PMFGGCLKCLLESDGELLMFEKYLSTCNDH--NDGPLVVQSDL--YITESTVCLKVYKLN 170
           P+FGG  K L+ES G+LL+ + YLS  +D   + G  VVQ DL  Y++E TV  KV+KLN
Sbjct: 239 PVFGGDKKYLVESKGDLLLVDMYLSIDSDEGLSIGHDVVQ-DLVQYMSERTVWFKVFKLN 297

Query: 171 *DLQNWVK---LEAWMLCFILW*QLLISASAPDFQGVKQ---INSTDKQWKRW------C 314
            + + W++   LE  +L   L   L  SASA +  G K      + D  + R        
Sbjct: 298 EEGKCWIEVNDLEDRVL--FLGDDLTFSASASELSGCKGNCIFFNDDFFYSRGEGDDGSL 355

Query: 315 ICTDIDVFNF*HGSVGPL 368
              DI VF    G +GPL
Sbjct: 356 FGRDIGVFELESGCIGPL 373



 Score = 24.6 bits (52), Expect(2) = 9e-06
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 388 SQLFWLPPAWVSDVTI 435
           S++FW PP WV+  ++
Sbjct: 380 SKMFWPPPDWVASTSL 395


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