BLASTX nr result

ID: Papaver32_contig00024098 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00024098
         (1039 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAN81442.1 hypothetical protein VITISV_011546 [Vitis vinifera]         40   7e-06
XP_019232589.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    49   8e-06

>CAN81442.1 hypothetical protein VITISV_011546 [Vitis vinifera]
          Length = 843

 Score = 40.4 bits (93), Expect(3) = 7e-06
 Identities = 13/58 (22%), Positives = 29/58 (50%)
 Frame = +3

Query: 537 CCFCDEDDETSSHLFYECWRTRRIWDYFIEGCRFDWTYNSNVTTNVKSWKFNWGDERL 710
           C  C E++E++ H+   C +TR +W   +      W + ++V   +  WK    ++++
Sbjct: 723 CVLCKENEESTDHILIHCGKTRELWTVVLSSFGVVWVFPNSVRNLLLEWKIKGLEKKM 780



 Score = 34.3 bits (77), Expect(3) = 7e-06
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 694 GVTKDLSQIWNNIPVAIWWCIW 759
           G+ K +S +W  +P+ ++WCIW
Sbjct: 775 GLEKKMSVVWKMVPICLFWCIW 796



 Score = 23.5 bits (49), Expect(3) = 7e-06
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 755 YGERNARVFENKKKN 799
           +GERN R+F+ K+K+
Sbjct: 796 WGERNRRMFQEKEKS 810


>XP_019232589.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH9 [Nicotiana attenuata]
          Length = 956

 Score = 48.5 bits (114), Expect(2) = 8e-06
 Identities = 25/84 (29%), Positives = 35/84 (41%)
 Frame = +3

Query: 462 SWLAHGGYFINYNRK*YPTFVVSSLCCFCDEDDETSSHLFYECWRTRRIWDYFIEGCRFD 641
           SWL      + +       F +SS C  C  D E++SHLF  C  T ++W  F+      
Sbjct: 325 SWLVAKQACLTHENLMKRGFQLSSRCYLCSTDSESNSHLFLHCRVTSQLWQLFLSMIGLR 384

Query: 642 WTYNSNVTTNVKSWKFNWGDERLK 713
           WT     T  ++ W    G  R K
Sbjct: 385 WTMPKTTTDLLRCWNKQEGSVRQK 408



 Score = 30.4 bits (67), Expect(2) = 8e-06
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 721 WNNIPVAIWWCIWR 762
           WN IP+ IWW +W+
Sbjct: 411 WNLIPMCIWWIVWK 424


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