BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00024016
         (643 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010244378.1 PREDICTED: RNA polymerase sigma factor sigC [Nelu...   217   3e-64
GAV56964.1 Sigma70_r3 domain-containing protein/Sigma70_r2 domai...   202   8e-59
KDO79960.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]    202   1e-58
XP_006475980.1 PREDICTED: RNA polymerase sigma factor sigC [Citr...   202   1e-58
XP_006450763.1 hypothetical protein CICLE_v10007968mg [Citrus cl...   202   1e-58
XP_002516489.1 PREDICTED: RNA polymerase sigma factor sigC [Rici...   200   1e-57
XP_017983625.1 PREDICTED: RNA polymerase sigma factor sigC [Theo...   199   2e-57
KJB65617.1 hypothetical protein B456_010G103500 [Gossypium raimo...   197   2e-57
XP_016683030.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   197   2e-57
XP_012450467.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   197   2e-57
OMO66884.1 RNA polymerase sigma-70 [Corchorus capsularis]             198   3e-57
OMO86642.1 RNA polymerase sigma-70 [Corchorus olitorius]              197   7e-57
XP_016677908.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   197   7e-57
XP_016677905.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   197   9e-57
XP_011081725.1 PREDICTED: RNA polymerase sigma factor sigC isofo...   193   1e-56
XP_012450466.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   197   1e-56
XP_016683029.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   197   2e-56
XP_012450465.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   197   2e-56
XP_012450464.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   197   2e-56
XP_016683028.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   197   2e-56

>XP_010244378.1 PREDICTED: RNA polymerase sigma factor sigC [Nelumbo nucifera]
           XP_010244379.1 PREDICTED: RNA polymerase sigma factor
           sigC [Nelumbo nucifera]
          Length = 558

 Score =  217 bits (552), Expect = 3e-64
 Identities = 103/162 (63%), Positives = 131/162 (80%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QI   RK+  + HGRYPDD+EI+  TGLS+ K+RLA KC R+VGSIDQK+
Sbjct: 397 IPLTLSRAINQIHKTRKSFFNTHGRYPDDDEISKCTGLSVAKVRLAGKCLRVVGSIDQKM 456

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD + +KFMEF PD S++TP+ +VM+QHM+KD++KLL+ L  RE++VL+LR GL DG+C+
Sbjct: 457 GDSLTVKFMEFMPDTSIKTPEDIVMRQHMRKDIHKLLQGLHPRERKVLVLRYGLCDGRCR 516

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLDL 156
           SLEEIG+LFNVTKEWIRKIEK+A  KVR EE   NLS YL L
Sbjct: 517 SLEEIGRLFNVTKEWIRKIEKAAMTKVRTEEVQRNLSEYLHL 558


>GAV56964.1 Sigma70_r3 domain-containing protein/Sigma70_r2 domain-containing
           protein/Sigma70_r4 domain-containing protein [Cephalotus
           follicularis]
          Length = 551

 Score =  202 bits (515), Expect = 8e-59
 Identities = 96/162 (59%), Positives = 125/162 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P  L+RA+ QIQ ARK+L + HG+YPDDNEIA  TGLSL KIR A +C R+VGS+DQK+
Sbjct: 390 IPYPLSRAVNQIQRARKSLNNTHGKYPDDNEIAKLTGLSLGKIRSACRCQRVVGSVDQKI 449

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GDD N K+ME  PD S+ETP+  V++QHM+KD+  LLE LD +E++VL+LR GL D +  
Sbjct: 450 GDDFNAKYMELMPDMSIETPEEDVLRQHMKKDILALLEGLDSKERRVLVLRYGLKDYRTM 509

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLDL 156
           SLEEIG+LFNV+KEW+R+I+K A  K+R E    NL HYL+L
Sbjct: 510 SLEEIGRLFNVSKEWVRRIQKKAMTKLRDEVTQRNLRHYLNL 551


>KDO79960.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]
          Length = 534

 Score =  202 bits (513), Expect = 1e-58
 Identities = 99/162 (61%), Positives = 129/162 (79%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P  L R I +IQ ARK L + HG+YP+D EIA +TGLSL +IR AS+C RIVGSIDQK+
Sbjct: 373 IPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKI 432

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD +N K++EF PDRSV++P  +VM+QHM+KDV+++LE+LD RE+QVL+LR GL D + K
Sbjct: 433 GDCLNAKYLEFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPK 492

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLDL 156
           SLEEIGKLF+V+KEWIRK+EK A  K+R  E   +LSH+L L
Sbjct: 493 SLEEIGKLFHVSKEWIRKLEKKAMTKLRDSETCRDLSHFLVL 534


>XP_006475980.1 PREDICTED: RNA polymerase sigma factor sigC [Citrus sinensis]
          Length = 534

 Score =  202 bits (513), Expect = 1e-58
 Identities = 99/162 (61%), Positives = 129/162 (79%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P  L R I +IQ ARK L + HG+YP+D EIA +TGLSL +IR AS+C RIVGSIDQK+
Sbjct: 373 IPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKI 432

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD +N K++EF PDRSV++P  +VM+QHM+KDV+++LE+LD RE+QVL+LR GL D + K
Sbjct: 433 GDCLNAKYLEFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPK 492

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLDL 156
           SLEEIGKLF+V+KEWIRK+EK A  K+R  E   +LSH+L L
Sbjct: 493 SLEEIGKLFHVSKEWIRKLEKKAMTKLRDSETCRDLSHFLVL 534


>XP_006450763.1 hypothetical protein CICLE_v10007968mg [Citrus clementina]
           ESR64003.1 hypothetical protein CICLE_v10007968mg
           [Citrus clementina]
          Length = 534

 Score =  202 bits (513), Expect = 1e-58
 Identities = 99/162 (61%), Positives = 129/162 (79%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P  L R I +IQ ARK L + HG+YP+D EIA +TGLSL +IR AS+C RIVGSIDQK+
Sbjct: 373 IPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKI 432

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD +N K++EF PDRSV++P  +VM+QHM+KDV+++LE+LD RE+QVL+LR GL D + K
Sbjct: 433 GDCLNAKYLEFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPK 492

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLDL 156
           SLEEIGKLF+V+KEWIRK+EK A  K+R  E   +LSH+L L
Sbjct: 493 SLEEIGKLFHVSKEWIRKLEKKAMTKLRDSETCRDLSHFLVL 534


>XP_002516489.1 PREDICTED: RNA polymerase sigma factor sigC [Ricinus communis]
           EEF45830.1 RNA polymerase sigma factor rpoD, putative
           [Ricinus communis]
          Length = 560

 Score =  200 bits (508), Expect = 1e-57
 Identities = 95/161 (59%), Positives = 128/161 (79%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAIYQIQ ARK L + +G+YPDD+EIA +TGLSL KI  AS+C R+VGSIDQK+
Sbjct: 399 IPCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKI 458

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           G+ +N K++EF PD SV++P+ VVM+QHM +D++ LL +LD RE+QVLILR GL D Q K
Sbjct: 459 GESLNAKYLEFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPK 518

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+ F+V+KEW+R++EK    ++R EE   NL HY++
Sbjct: 519 SLEEIGRHFHVSKEWVRRLEKRVMTRLRNEETCRNLRHYIN 559


>XP_017983625.1 PREDICTED: RNA polymerase sigma factor sigC [Theobroma cacao]
           XP_017983626.1 PREDICTED: RNA polymerase sigma factor
           sigC [Theobroma cacao]
          Length = 536

 Score =  199 bits (505), Expect = 2e-57
 Identities = 96/161 (59%), Positives = 123/161 (76%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YPD++ IA FTGLSL KIR A+KC R+VGSIDQK+
Sbjct: 375 VPCTLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKI 434

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD +N K++EF PD SV +P+  VM+QHM++D++ LL  LD RE+QV++LR GL     K
Sbjct: 435 GDCMNAKYLEFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPK 494

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF+V+KEWIR+IE  A   +R +E   NLSHYLD
Sbjct: 495 SLEEIGRLFHVSKEWIRRIEMKAMKNLRDKETCRNLSHYLD 535


>KJB65617.1 hypothetical protein B456_010G103500 [Gossypium raimondii]
          Length = 458

 Score =  197 bits (500), Expect = 2e-57
 Identities = 95/161 (59%), Positives = 125/161 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YP+++EIA  TGLSL+KIR A+KC R+VGSIDQK+
Sbjct: 297 VPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKI 356

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD IN K++EF PD S+ +P+  VM+QHM++D++ LL  L++RE+QV++LR GL     K
Sbjct: 357 GDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPK 416

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF V+KEWIR+IE  A  K+R +E   NLSHYLD
Sbjct: 417 SLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLD 457


>XP_016683030.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X3
           [Gossypium hirsutum]
          Length = 471

 Score =  197 bits (500), Expect = 2e-57
 Identities = 95/161 (59%), Positives = 125/161 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YP+++EIA  TGLSL+KIR A+KC R+VGSIDQK+
Sbjct: 310 VPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKI 369

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD IN K++EF PD S+ +P+  VM+QHM++D++ LL  L++RE+QV++LR GL     K
Sbjct: 370 GDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPK 429

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF V+KEWIR+IE  A  K+R +E   NLSHYLD
Sbjct: 430 SLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLD 470


>XP_012450467.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X6
           [Gossypium raimondii]
          Length = 471

 Score =  197 bits (500), Expect = 2e-57
 Identities = 95/161 (59%), Positives = 125/161 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YP+++EIA  TGLSL+KIR A+KC R+VGSIDQK+
Sbjct: 310 VPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKI 369

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD IN K++EF PD S+ +P+  VM+QHM++D++ LL  L++RE+QV++LR GL     K
Sbjct: 370 GDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPK 429

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF V+KEWIR+IE  A  K+R +E   NLSHYLD
Sbjct: 430 SLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLD 470


>OMO66884.1 RNA polymerase sigma-70 [Corchorus capsularis]
          Length = 555

 Score =  198 bits (504), Expect = 3e-57
 Identities = 96/162 (59%), Positives = 124/162 (76%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P  L++AI QIQ A+K L   HG+ PD++EIA FTGLSL KIR A+KC RIVGSIDQK+
Sbjct: 394 VPCMLSKAIVQIQKAQKALSQSHGKNPDEDEIAKFTGLSLAKIRSANKCMRIVGSIDQKI 453

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD +N K++EF PD S+ +P+  VM+QHM+KD+Y LL  LD RE+QV++LR GL     +
Sbjct: 454 GDCMNAKYLEFIPDLSIRSPEKTVMRQHMEKDIYDLLNGLDARERQVMVLRFGLKGSPPR 513

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLDL 156
           SLEEIG+LF+V+KEWIR+IE+ A  K+R  E   NLSHYLDL
Sbjct: 514 SLEEIGRLFHVSKEWIRRIERKAMTKMRDTETCRNLSHYLDL 555


>OMO86642.1 RNA polymerase sigma-70 [Corchorus olitorius]
          Length = 555

 Score =  197 bits (502), Expect = 7e-57
 Identities = 96/162 (59%), Positives = 122/162 (75%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P  L +AI QIQ ARK L   HG+ PD++EIA FTGLSL KIR A+KC RIVGSIDQK+
Sbjct: 394 VPCMLNKAIVQIQKARKALSQSHGKNPDEDEIAKFTGLSLAKIRSANKCMRIVGSIDQKI 453

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD +N K++EF PD S+ +P+  VM+QHM+KD+Y LL  LD RE+QV++LR GL     +
Sbjct: 454 GDCMNAKYLEFIPDLSIRSPEKTVMRQHMEKDIYDLLNGLDARERQVMVLRFGLKGSPPR 513

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLDL 156
           SLEEIG++F V+KEWIR++EK A  K+R  E   NLSHYLDL
Sbjct: 514 SLEEIGRVFRVSKEWIRRLEKKAMTKMRDTETCRNLSHYLDL 555


>XP_016677908.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
           [Gossypium hirsutum]
          Length = 556

 Score =  197 bits (502), Expect = 7e-57
 Identities = 96/161 (59%), Positives = 125/161 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YP+++EIA  TGLSL+KIRLA+KC R+VGSIDQK+
Sbjct: 395 VPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRLANKCFRVVGSIDQKI 454

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD IN K++EF PD S+ +P+  VM+QHM++D+  LL  L++RE+QV++LR GL     K
Sbjct: 455 GDYINAKYLEFIPDASICSPEKTVMRQHMKEDINDLLNGLEKRERQVMVLRYGLTGSPPK 514

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF V+KEWIR+IE  A  K+R +E   NLSHYLD
Sbjct: 515 SLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLD 555


>XP_016677905.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
           [Gossypium hirsutum] XP_016677906.1 PREDICTED: RNA
           polymerase sigma factor sigC-like isoform X1 [Gossypium
           hirsutum]
          Length = 569

 Score =  197 bits (502), Expect = 9e-57
 Identities = 96/161 (59%), Positives = 125/161 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YP+++EIA  TGLSL+KIRLA+KC R+VGSIDQK+
Sbjct: 408 VPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRLANKCFRVVGSIDQKI 467

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD IN K++EF PD S+ +P+  VM+QHM++D+  LL  L++RE+QV++LR GL     K
Sbjct: 468 GDYINAKYLEFIPDASICSPEKTVMRQHMKEDINDLLNGLEKRERQVMVLRYGLTGSPPK 527

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF V+KEWIR+IE  A  K+R +E   NLSHYLD
Sbjct: 528 SLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLD 568


>XP_011081725.1 PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Sesamum
           indicum]
          Length = 388

 Score =  193 bits (490), Expect = 1e-56
 Identities = 93/160 (58%), Positives = 126/160 (78%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL++ I Q+Q ARK L + +G+YPDD++IA +TGLS+ KI  ASKC R+VGSIDQK+
Sbjct: 226 IPCTLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKI 285

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           G+ I+ K+ME  PD S+ +P+  V++QHM  DV++LL  L+ REKQVLILR GL + QCK
Sbjct: 286 GEAISAKYMEIAPDTSILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCK 345

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYL 162
           SLEEIG+LF V+KEWIRKIE++A  K+R E++L  LSHY+
Sbjct: 346 SLEEIGRLFCVSKEWIRKIERAALAKLRNEDSLKILSHYV 385


>XP_012450466.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X5
           [Gossypium raimondii]
          Length = 547

 Score =  197 bits (500), Expect = 1e-56
 Identities = 95/161 (59%), Positives = 125/161 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YP+++EIA  TGLSL+KIR A+KC R+VGSIDQK+
Sbjct: 386 VPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKI 445

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD IN K++EF PD S+ +P+  VM+QHM++D++ LL  L++RE+QV++LR GL     K
Sbjct: 446 GDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPK 505

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF V+KEWIR+IE  A  K+R +E   NLSHYLD
Sbjct: 506 SLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLD 546


>XP_016683029.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
           [Gossypium hirsutum]
          Length = 564

 Score =  197 bits (500), Expect = 2e-56
 Identities = 95/161 (59%), Positives = 125/161 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YP+++EIA  TGLSL+KIR A+KC R+VGSIDQK+
Sbjct: 403 VPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKI 462

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD IN K++EF PD S+ +P+  VM+QHM++D++ LL  L++RE+QV++LR GL     K
Sbjct: 463 GDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPK 522

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF V+KEWIR+IE  A  K+R +E   NLSHYLD
Sbjct: 523 SLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLD 563


>XP_012450465.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X4
           [Gossypium raimondii] KJB65615.1 hypothetical protein
           B456_010G103500 [Gossypium raimondii]
          Length = 565

 Score =  197 bits (500), Expect = 2e-56
 Identities = 95/161 (59%), Positives = 125/161 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YP+++EIA  TGLSL+KIR A+KC R+VGSIDQK+
Sbjct: 404 VPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKI 463

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD IN K++EF PD S+ +P+  VM+QHM++D++ LL  L++RE+QV++LR GL     K
Sbjct: 464 GDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPK 523

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF V+KEWIR+IE  A  K+R +E   NLSHYLD
Sbjct: 524 SLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLD 564


>XP_012450464.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X3
           [Gossypium raimondii]
          Length = 576

 Score =  197 bits (500), Expect = 2e-56
 Identities = 95/161 (59%), Positives = 125/161 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YP+++EIA  TGLSL+KIR A+KC R+VGSIDQK+
Sbjct: 415 VPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKI 474

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD IN K++EF PD S+ +P+  VM+QHM++D++ LL  L++RE+QV++LR GL     K
Sbjct: 475 GDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPK 534

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF V+KEWIR+IE  A  K+R +E   NLSHYLD
Sbjct: 535 SLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLD 575


>XP_016683028.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
           [Gossypium hirsutum]
          Length = 577

 Score =  197 bits (500), Expect = 2e-56
 Identities = 95/161 (59%), Positives = 125/161 (77%)
 Frame = -3

Query: 641 LPATLARAIYQIQNARKTLQSLHGRYPDDNEIATFTGLSLTKIRLASKCPRIVGSIDQKL 462
           +P TL+RAI QIQ ARK L   HG+YP+++EIA  TGLSL+KIR A+KC R+VGSIDQK+
Sbjct: 416 VPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKI 475

Query: 461 GDDINIKFMEFTPDRSVETPDVVVMKQHMQKDVYKLLENLDQREKQVLILRQGLWDGQCK 282
           GD IN K++EF PD S+ +P+  VM+QHM++D++ LL  L++RE+QV++LR GL     K
Sbjct: 476 GDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPK 535

Query: 281 SLEEIGKLFNVTKEWIRKIEKSAYNKVRKEENLSNLSHYLD 159
           SLEEIG+LF V+KEWIR+IE  A  K+R +E   NLSHYLD
Sbjct: 536 SLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLD 576