BLASTX nr result

ID: Papaver32_contig00023773 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00023773
         (730 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_004429259.1 putative capsid protein [Fig cryptic virus] CBW77...   152   7e-41
KVI07717.1 Pseudouridine synthase, catalytic domain-containing p...   127   1e-29
ERM99970.1 hypothetical protein AMTR_s00110p00120920, partial [A...    62   3e-08

>YP_004429259.1 putative capsid protein [Fig cryptic virus] CBW77437.1 putative
           capsid protein [Fig cryptic virus]
          Length = 337

 Score =  152 bits (383), Expect = 7e-41
 Identities = 87/229 (37%), Positives = 119/229 (51%)
 Frame = -1

Query: 688 DPLEKLVAHGKIRTQPYTHYRSATTLTVDFELLANKIQSILSEAYQYHDPLCLQYAGTNK 509
           D LE L+A G+++  PY          VDF+ L N+I +I+   Y   D L   Y GT  
Sbjct: 7   DILEDLIADGRLQITPYVTSTEPKIFDVDFDALWNRINAIIVPIYTNWDQLRFHYPGTTT 66

Query: 508 EIDQCLMSDILALIDFALCVLYNRLQAVAESYSSSTSLSRMKKRAPVDNKMVFPXXXXXX 329
            +   +  D+  L+ FAL  LYNRL++VAE +   T  SRM  RAP+ N+M FP      
Sbjct: 67  TVTNNITLDVGHLVTFALWQLYNRLRSVAECFHHPTRTSRMNTRAPISNRMEFPSFLSSM 126

Query: 328 XXSIGPLRITDAGRDALVLYAPLPNTDNNYGRSQSHELVYGHYQRLINCLHSCGIGLSPI 149
             SI  LRI D   D L L+     T NNYGRS       G Y RL   L + G+ L+PI
Sbjct: 127 LESISWLRINDGPVDYLALFTAPTGTSNNYGRSTVQVPDNGCYDRLTGKLRALGVQLTPI 186

Query: 148 DFSNREGAFWTTCSLNFKQHPHFLNVIGTVHPSHYTNEDIVRSLAILDT 2
           D +   G+FW T  +  ++     N++GT H SHY NED +R++ +  T
Sbjct: 187 DMTPSAGSFWPTTQVITEE--ELYNIVGTFHSSHYVNEDAIRAIFLAGT 233


>KVI07717.1 Pseudouridine synthase, catalytic domain-containing protein [Cynara
            cardunculus var. scolymus]
          Length = 882

 Score =  127 bits (318), Expect = 1e-29
 Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
 Frame = -1

Query: 730  ISSMAAKRRRECSPDPLEKLVAHGKIRTQPYTHYRSATTLTVDFELLANKIQSILSEAYQ 551
            + S   K +     DP   LVA G+I  QP   Y   T + +D E LA  ++  L+    
Sbjct: 521  LDSHNQKAKPSKKADPFLDLVASGRISVQPIHSYGLTTVVEIDLEHLATAMKDRLNLVLP 580

Query: 550  YHDPLCLQY-AGTNKEIDQCLMSDILALIDFALCVLYNRLQAVAESYSSSTSLSRMKKRA 374
            +   LC +Y  G+   I   +M+D+  ++D A+ V YNRL+ + E Y+ +   +RM  R+
Sbjct: 581  FIPELCNRYNCGSETSITDTIMADVNMMVDTAISVTYNRLRHILELYNPTVCNTRMNPRS 640

Query: 373  PVDNKMVFPXXXXXXXXSIGPLRITDAGRDALVLYAPLPNTDNNYGRSQSHELVYGHYQR 194
            P  N+  FP        SIGPLR+ D     +++Y+   N    YGR+     +YG ++R
Sbjct: 641  PGSNRYRFPAFIASVLGSIGPLRVMDGPEPMVIVYSTSANRSRTYGRAAPFNFIYGQFER 700

Query: 193  LINCLHSCGIGLSPIDFS--NREGAFWTTCSLNFKQHPHFLNVIGTVHPSHYTNEDIVRS 20
            LI+ L + G+ L+ ID    +R G+F++T  +    H      I   H SHY ++DIV +
Sbjct: 701  LIDNLEAIGVPLATIDVKAVDRGGSFFST--IVPTHHDGLWGFIAPFHHSHYKHKDIVNA 758


>ERM99970.1 hypothetical protein AMTR_s00110p00120920, partial [Amborella
           trichopoda]
          Length = 185

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
 Frame = -1

Query: 685 PLEK-LVAHGKIRTQPYTHYRSATTLTVDFELLANKIQSILSEAYQYHDPLCLQYAGTNK 509
           P+E  LV  G++  +P + +     L +DF  L   +   L      H+PL         
Sbjct: 30  PMEDVLVRKGRLIPKPRSIWPKVNVLGIDFVHLYTVLLFWLESFLTSHEPLRKFCDRITY 89

Query: 508 EIDQCLMSDILALIDFALCVLYNRLQAVAESYSSSTSLSRMKKRAPVDNKMVFPXXXXXX 329
           EI   ++  I +L++ +L  L+N L+++AE+    T  +   ++AP   +   P      
Sbjct: 90  EITTVIIDGIRSLLNQSLLELWNSLRSIAETNDHDTRNNIFARKAPTFKEFEMPRFYANL 149

Query: 328 XXSIGPLRITDAGRDALVLYAPLPNTDNNYGRSQ 227
              IGPL I D+  D +++YAP     +NY R++
Sbjct: 150 LFGIGPLHIEDSLMDTIIIYAPAQERGDNYRRTK 183


Top