BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00022295
         (1466 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP63120.1 Retrovirus-related Pol polyprotein from transposon TN...   712   0.0  
BAA11674.1 unnamed protein product [Nicotiana tabacum]                731   0.0  
KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN...   718   0.0  
KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN...   718   0.0  
XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein fro...   696   0.0  
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN...   696   0.0  
AAW22873.1 putative polyprotein [Solanum lycopersicum]                662   0.0  
AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris]          688   0.0  
CAN65281.1 hypothetical protein VITISV_035564 [Vitis vinifera]        659   0.0  
KYP50580.1 Retrovirus-related Pol polyprotein from transposon TN...   639   0.0  
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t...   669   0.0  
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN...   666   0.0  
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]             666   0.0  
KYP42640.1 Retrovirus-related Pol polyprotein from transposon TN...   607   0.0  
CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]        636   0.0  
KYP42630.1 Retrovirus-related Pol polyprotein from transposon TN...   607   0.0  
KYP59970.1 Retrovirus-related Pol polyprotein from transposon TN...   579   0.0  
ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]                  609   0.0  
ACL97386.1 Gag-Pol polyprotein [Medicago truncatula]                  609   0.0  
ACL97383.1 Gag-Pol polyprotein [Medicago truncatula]                  607   0.0  

>KYP63120.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 501

 Score =  712 bits (1838), Expect = 0.0
 Identities = 341/485 (70%), Positives = 411/485 (84%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            ++LV+ P+ ++ LKNKWVYRIKTED N++PRYKARLVVKG+ Q KG+DF++IFSPVV+  
Sbjct: 14   YELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVKGFSQEKGIDFEKIFSPVVKMS 73

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIRV+L IAA+ DLEIEQLDVKT FLHG+LEE++ M QPEGF+V GK+++VC+L KSLYG
Sbjct: 74   SIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEICMEQPEGFKVPGKQNLVCRLTKSLYG 133

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFE FM EH +KRT SDHCVFI+++A GDFL LLLYVDDMLIVG+D+ KI
Sbjct: 134  LKQAPRQWYKKFEFFMAEHEFKRTESDHCVFIKRYASGDFLILLLYVDDMLIVGQDRIKI 193

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
              LK DLSKSFAMKDLG AK+ILGM ITRDR  R LWLSQE YIEKVL++FNMDK +PV+
Sbjct: 194  AALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKPVN 253

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA HF+L+  Q P ++ E  +M+KIPY+S VGSLMYAM+CTRPDIA+AVGVVSRFL+N
Sbjct: 254  TPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRFLAN 313

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW AVKWILRYLRGTS  CLC+G  KP L GYTD+DLAG  DS KSTSGYL T+ G
Sbjct: 314  PGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLEGYTDADLAGDIDSRKSTSGYLTTFVG 373

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAVSWQSKLQKCVALSTTEAEYIAATE+CKEM+WMK  + ELGV Q+R+++ CD+QSAI+
Sbjct: 374  GAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVDQERYVLKCDNQSAIY 433

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            L+KNS+FHSR+KHI+ RY WI+EVLEEK L+++K+HTD+N SDMMTK +P  K    C  
Sbjct: 434  LAKNSTFHSRTKHIDTRYHWIREVLEEKKLHLDKVHTDENWSDMMTKVIPTKKFEDCCQG 493

Query: 1441 AGLVV 1455
            AGL++
Sbjct: 494  AGLLL 498


>BAA11674.1 unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  731 bits (1888), Expect = 0.0
 Identities = 346/484 (71%), Positives = 417/484 (86%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            F+LV  P+ ++ LKNKWV+++K ++ NS PR+KARLVVKG+ QRKG+DFDEIFSPVV+  
Sbjct: 844  FELVKLPKGKRALKNKWVFKMKHDEHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKMT 903

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIR VL +AASL+LE+EQ+DVKT FLHG+LEE++YM QP+GF+ KGKE  VC+L+KSLYG
Sbjct: 904  SIRTVLGLAASLNLEVEQMDVKTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYG 963

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFES M +HGYK+T SDHCVF QKF+D DF+ LLLYVDDMLIVG++  +I
Sbjct: 964  LKQAPRQWYKKFESVMGQHGYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRI 1023

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
            + LK  LSK FAMKDLG AK+ILGM I RDR+A+KLWLSQE YIEKVLQRFNM+K + VS
Sbjct: 1024 NSLKEQLSKFFAMKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVS 1083

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
            CPLANHF+L+  Q P  D E+RKME+IPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN
Sbjct: 1084 CPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 1143

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW+AVKWILRYLRGTS +CLC+G D P LVGYTD+D+AG  DS KSTSGYL  ++G
Sbjct: 1144 PGKEHWDAVKWILRYLRGTSKLCLCFGEDNPVLVGYTDADMAGDVDSRKSTSGYLINFSG 1203

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAVSWQSKLQKCVALSTTEAE+IAATE+CKE+IWMK+F+ ELG  Q  + ++CDSQSAIH
Sbjct: 1204 GAVSWQSKLQKCVALSTTEAEFIAATEACKELIWMKKFLTELGFSQDGYQLFCDSQSAIH 1263

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            L+KN+SFHSRSKHI++RY WI++VLE+K+L +EKIHTD+NGSDM+TK+LPK K  +    
Sbjct: 1264 LAKNASFHSRSKHIDVRYNWIRDVLEKKMLRLEKIHTDENGSDMLTKTLPKGKFEFCREA 1323

Query: 1441 AGLV 1452
            AG+V
Sbjct: 1324 AGIV 1327


>KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  718 bits (1853), Expect = 0.0
 Identities = 344/485 (70%), Positives = 413/485 (85%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            ++LV+ P+ ++ LKNKWVYRIKTED N++PRYKARLVVKG+ Q KG+DF+EIFSPVV+  
Sbjct: 818  YELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVKGFGQEKGIDFEEIFSPVVKMS 877

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIRV+L IAA+ DLEIEQLDVKT FLHG+LEE++YM QPEGF+V GKE++VC+L KSLYG
Sbjct: 878  SIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFKVPGKENLVCRLTKSLYG 937

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFESFM EH +K+T SDHCVFI+++A GDFL LLLYVDDMLI G+D+ KI
Sbjct: 938  LKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYASGDFLILLLYVDDMLIFGQDRIKI 997

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
              LK DLSKSFAMKDLG AK+ILGM ITRDR  R LWLSQE YIEKVL++FNMDK +PV+
Sbjct: 998  AALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKPVN 1057

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA HF+L+  Q P ++ E  +M+KIPY+S VGSLMYAM+CTRPDIA+AVGVVSRFL++
Sbjct: 1058 TPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRFLAD 1117

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW AVKWILRYLRGTS  CLC+G  KP L GYTD+DLAG  DS KSTSGYL T+AG
Sbjct: 1118 PGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDIDSRKSTSGYLTTFAG 1177

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAVSWQSKLQKCVALSTTEAEYIAATE+CKEM+WMK  + ELGV+Q+R++V CD+QSAI+
Sbjct: 1178 GAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVEQERYVVKCDNQSAIY 1237

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            L+KNS FHSR+KHI+ RY WI+EVLEEK L+++K+HTD+N SDMMTK +P  K    C  
Sbjct: 1238 LAKNSKFHSRTKHIDTRYHWIREVLEEKKLHLDKVHTDENWSDMMTKVIPTKKFEDCCQG 1297

Query: 1441 AGLVV 1455
            AGL++
Sbjct: 1298 AGLLL 1302


>KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  718 bits (1853), Expect = 0.0
 Identities = 344/485 (70%), Positives = 413/485 (85%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            ++LV+ P+ ++ LKNKWVYRIKTED N++PRYKARLVVKG+ Q KG+DF+EIFSPVV+  
Sbjct: 818  YELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVKGFGQEKGIDFEEIFSPVVKMS 877

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIRV+L IAA+ DLEIEQLDVKT FLHG+LEE++YM QPEGF+V GKE++VC+L KSLYG
Sbjct: 878  SIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFKVPGKENLVCRLTKSLYG 937

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFESFM EH +K+T SDHCVFI+++A GDFL LLLYVDDMLI G+D+ KI
Sbjct: 938  LKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYASGDFLILLLYVDDMLIFGQDRIKI 997

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
              LK DLSKSFAMKDLG AK+ILGM ITRDR  R LWLSQE YIEKVL++FNMDK +PV+
Sbjct: 998  AALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKPVN 1057

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA HF+L+  Q P ++ E  +M+KIPY+S VGSLMYAM+CTRPDIA+AVGVVSRFL++
Sbjct: 1058 TPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRFLAD 1117

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW AVKWILRYLRGTS  CLC+G  KP L GYTD+DLAG  DS KSTSGYL T+AG
Sbjct: 1118 PGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDIDSRKSTSGYLTTFAG 1177

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAVSWQSKLQKCVALSTTEAEYIAATE+CKEM+WMK  + ELGV+Q+R++V CD+QSAI+
Sbjct: 1178 GAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVEQERYVVKCDNQSAIY 1237

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            L+KNS FHSR+KHI+ RY WI+EVLEEK L+++K+HTD+N SDMMTK +P  K    C  
Sbjct: 1238 LAKNSKFHSRTKHIDTRYHWIREVLEEKKLHLDKVHTDENWSDMMTKVIPTKKFEDCCQG 1297

Query: 1441 AGLVV 1455
            AGL++
Sbjct: 1298 AGLLL 1302


>XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Gossypium arboreum]
          Length = 1184

 Score =  696 bits (1796), Expect = 0.0
 Identities = 327/483 (67%), Positives = 409/483 (84%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            F+LV  P+ ++ LKN+WVYR+K E+ +S PRYKARLVVKGY Q+KGVDF+EIFSPVV+  
Sbjct: 697  FELVKLPKGKRALKNRWVYRLKQEEKSSSPRYKARLVVKGYTQKKGVDFEEIFSPVVKMS 756

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIR +L++AA  DLE+EQ+DVK  FLHG+LE+++YM QPEGF  + KE  VC+LKKSLYG
Sbjct: 757  SIRTILSLAACYDLEVEQMDVKIAFLHGDLEDELYMEQPEGFVAQRKEDYVCRLKKSLYG 816

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFES M E  YK+T SDHCVF++KF+  DF+ LLLYVDDMLIVG++  +I
Sbjct: 817  LKQAPRQWYKKFESVMGEQSYKKTTSDHCVFVKKFSGDDFIILLLYVDDMLIVGQNASRI 876

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
            ++LK +LSKSFAMKDLG AK+ILG+ +TRDRKA+KLWLSQE YIEKVLQ+F+MDKA+ V+
Sbjct: 877  EKLKQELSKSFAMKDLGPAKQILGIRLTRDRKAKKLWLSQERYIEKVLQKFSMDKAKAVN 936

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             P A HF+L+    P  + EK +M+KIPY+SAVGSLMYAMVCTRPD+A+AVG VSRFLSN
Sbjct: 937  TPFAMHFRLSVKHSPSTEKEKEEMQKIPYSSAVGSLMYAMVCTRPDLAYAVGTVSRFLSN 996

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
               EHW AVKWI+RYLRGTSNM LC+G +KP  VGYTDSD+AG  DS +STSGYL TYAG
Sbjct: 997  LGREHWNAVKWIMRYLRGTSNMKLCFGNEKPVTVGYTDSDMAGDIDSRRSTSGYLITYAG 1056

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAV+WQS+ QKCVALSTTE+E+IAATE+CKEM+WMK+FV+ELG  Q+++++YCDSQSAIH
Sbjct: 1057 GAVAWQSRQQKCVALSTTESEFIAATEACKEMLWMKKFVQELGFTQEKYVLYCDSQSAIH 1116

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            LSKNS+FH+RSKHI++RY WI++VLE K+L +EKIHT+DNG+DM+TK LP+ K    C  
Sbjct: 1117 LSKNSTFHARSKHIDVRYHWIRDVLEAKLLELEKIHTNDNGADMLTKVLPRGKFEACCLT 1176

Query: 1441 AGL 1449
            +G+
Sbjct: 1177 SGM 1179


>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score =  696 bits (1795), Expect = 0.0
 Identities = 327/486 (67%), Positives = 405/486 (83%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            ++LV+ P+ +K LKNKWV+++KTE+ N++PRYKAR+VVKG  Q+KG+DF+EIFSPVV+  
Sbjct: 828  YELVELPQGRKALKNKWVFKLKTEENNTKPRYKARIVVKGCNQKKGIDFEEIFSPVVKMT 887

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIR +L +AA LDLEIEQLDVKT FLHG+LEE++YM QPEGF   GKEH+VC+LKKSLYG
Sbjct: 888  SIRAILGLAAKLDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFAEPGKEHLVCRLKKSLYG 947

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKF+ FM +H +K+T++D CVF++ + +G+ + LLLYVDDMLIVGKDK KI
Sbjct: 948  LKQAPRQWYKKFDLFMAQHNFKKTSADQCVFVKNYENGESIILLLYVDDMLIVGKDKTKI 1007

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
              LK  LSKSFAMKDLG+ K+ILGM+I RDR  R LW+SQE YI+KVL+RFNM  A+ V 
Sbjct: 1008 AALKKALSKSFAMKDLGSVKKILGMKIIRDRSKRMLWMSQEDYIKKVLERFNMHNAKSVH 1067

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PL  H KL++ QCPVN+ EK +M K+PY+SAVGSLMYAMVCTRPDIA+AVGVVSRFLSN
Sbjct: 1068 VPLPGHLKLSKKQCPVNE-EKEEMSKVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRFLSN 1126

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW AVKWILRYL+GT+  CLC+G     L GY+D+D+AG  DS KSTSGYL T+AG
Sbjct: 1127 PGKEHWNAVKWILRYLKGTAKSCLCFGNGNLMLTGYSDADMAGDVDSRKSTSGYLITFAG 1186

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GA+SWQS+LQKC+ALSTTEAE+IA TE CKE++WMK+F++ELG  Q+ +++YCDSQSAIH
Sbjct: 1187 GAISWQSRLQKCIALSTTEAEFIAITEGCKEILWMKKFLQELGQDQESYVLYCDSQSAIH 1246

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            LSKNS+FHSRSKHI++RY WI++VLE K+L IEKIHT DNG+DMMTKSLP+ K       
Sbjct: 1247 LSKNSTFHSRSKHIDVRYHWIRDVLESKMLKIEKIHTKDNGADMMTKSLPREKIEVCKEV 1306

Query: 1441 AGLVVT 1458
            AGL  T
Sbjct: 1307 AGLAST 1312


>AAW22873.1 putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  662 bits (1707), Expect = 0.0
 Identities = 312/480 (65%), Positives = 401/480 (83%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            +DLV  P+ +K+LKN+W+++ K +DGN   + KARLVVKG  Q+KG+DFDEIF+PVV+  
Sbjct: 204  YDLVKPPKGKKVLKNRWLFKNK-KDGNKLVKRKARLVVKGCHQKKGIDFDEIFAPVVKMT 262

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIR++L +A  L+LE+EQLDVKT FLHG+L E++YM QPEGFEVKGKE+ VCKLKKSLYG
Sbjct: 263  SIRMILGLATCLNLELEQLDVKTAFLHGDLHEEIYMEQPEGFEVKGKENFVCKLKKSLYG 322

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WY KF+SFM  + YKRT +D CV+ +KF++G+F+ L LYVDDMLIVG+D + I
Sbjct: 323  LKQAPRQWYHKFDSFMSNNEYKRTTADPCVYFRKFSEGNFIILCLYVDDMLIVGQDVEMI 382

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
             RLK DLSKSF MKDLG AK+ILGMEI RDRKA KLWLSQE+YIE+VL+RFNM  A+PV+
Sbjct: 383  CRLKEDLSKSFDMKDLGPAKQILGMEIARDRKAGKLWLSQENYIERVLERFNMKNAKPVN 442

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA HFKL++  CP  + EK  M  IPY+S VGSLMYAMVCTRPDIAHAVG+VSR+L+N
Sbjct: 443  TPLAAHFKLSKRCCPTTEKEKESMSHIPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLAN 502

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P+  HWEAVKWILRYLRGTSN+ LC+GG +P L G+TD+D+AG  D+ KSTSGYLF +A 
Sbjct: 503  PSKVHWEAVKWILRYLRGTSNLSLCFGGGEPILEGFTDADMAGDLDNRKSTSGYLFKFAR 562

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GA+SWQSKLQKCVALSTTE EYIAA E+ KEM+W+KRF++ELG+KQ  ++V+CDS+SA+ 
Sbjct: 563  GAISWQSKLQKCVALSTTEVEYIAAVEASKEMLWLKRFLQELGLKQSEYVVFCDSKSAMD 622

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            LSKN  +H+R+KHI++RY W++ V++E+++ ++KIHT+ NG+DM+TK +P  K + FCS+
Sbjct: 623  LSKNIMYHARTKHIDVRYHWLRVVIKERLMKLKKIHTNKNGADMLTKVVPGSK-LEFCSK 681


>AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score =  688 bits (1776), Expect = 0.0
 Identities = 321/482 (66%), Positives = 406/482 (84%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            FDLV  P+++K L+N+W+YR+K E  ++ PRYKARLVVKG+ QRKG+DF+EIFSPVV+  
Sbjct: 787  FDLVKLPKDKKALENRWIYRVKQESNSTSPRYKARLVVKGFRQRKGIDFNEIFSPVVKMS 846

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIR+VL++AA+LDLE+EQ+DVKT FLHG+LEE++YM QP+GF V+GKE  VC+L+KSLYG
Sbjct: 847  SIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYG 906

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFES M E GYK+T SDHCVF++KFA+ DF+ LLLYVDD+LIVGKD   I
Sbjct: 907  LKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFANDDFIILLLYVDDILIVGKDISMI 966

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
            +RLK  LS+SFAMKD+GAAK+ILG+ I RDR+ +KLWLSQE+Y+++VLQRF M+ A+ VS
Sbjct: 967  NRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVS 1026

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA HFKL+  Q P  + EK  M++IPYASAVGSLMYAMVCTRPDIAH VG VSRF+SN
Sbjct: 1027 TPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSN 1086

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW AVKWILRYLRGT+ + LC+GGDKP LVGYTDSD+ G  DS +STSGY+  +AG
Sbjct: 1087 PGREHWNAVKWILRYLRGTTCLRLCFGGDKPTLVGYTDSDMGGDIDSRRSTSGYVIKFAG 1146

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAV+WQS+LQKCVALSTTEAE+IA TE+CKE++W+K+ ++EL   Q +++++CDSQSAI+
Sbjct: 1147 GAVAWQSRLQKCVALSTTEAEFIAITEACKELLWVKKLLQELSFVQDKYLLFCDSQSAIY 1206

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            L KNS+FHSRSKHI++RY WI++ LE ++L + K+HTDDN +DMMTKSLP+ K    C  
Sbjct: 1207 LGKNSTFHSRSKHIDVRYHWIRDALEARLLELAKVHTDDNCADMMTKSLPRSKSETCCKI 1266

Query: 1441 AG 1446
            AG
Sbjct: 1267 AG 1268


>CAN65281.1 hypothetical protein VITISV_035564 [Vitis vinifera]
          Length = 809

 Score =  659 bits (1701), Expect = 0.0
 Identities = 315/481 (65%), Positives = 389/481 (80%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            ++ +  P  ++ LKNKWVYR+K E+  SQP YKA+LVVKG+ Q KG+DFDEIFSPVV+  
Sbjct: 322  YEFIKLPNEKRALKNKWVYRVKQEEHASQPCYKAKLVVKGFIQNKGIDFDEIFSPVVKMS 381

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
             IRVVL +AASLDLEIEQ+DVKTTFLHG+L++++YM Q EGF +KGKE   CKLKKSLYG
Sbjct: 382  FIRVVLGLAASLDLEIEQMDVKTTFLHGDLDKEIYMEQLEGFIIKGKEDYACKLKKSLYG 441

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFES M E GYK+T S+HCVF+ KF+D DF+ LLLYVDD+LIVG++  +I
Sbjct: 442  LKQAPRQWYKKFESVMGEQGYKKTTSNHCVFVHKFSDDDFVILLLYVDDILIVGRNVSRI 501

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
            D+LK  LSKSF+MKDLG  K+ILG+ I RDR ++KL++SQE YIEKVL+RFNM KA+ V+
Sbjct: 502  DKLKKQLSKSFSMKDLGPVKKILGIRIERDRASKKLYMSQEQYIEKVLERFNMSKAKVVN 561

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA+HFKL+R   P  D EK  M ++PYASAVGSLM  MVCTRPDIA+ +GVVSRFLSN
Sbjct: 562  SPLASHFKLSRRHSPSIDKEKEDMRRVPYASAVGSLMNPMVCTRPDIAYVIGVVSRFLSN 621

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P   HWEAVKWI+RYL+GTS + L +   KP LV YTDS++AG  D+ + T GYL T++G
Sbjct: 622  PGRLHWEAVKWIMRYLQGTSKLKLTFESGKPVLVSYTDSNMAGDVDNRRPTLGYLMTFSG 681

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAV WQS+LQK VALSTTEAEYIAA E+CKE++WMKRF+ ELG KQQR++VYCD+QS IH
Sbjct: 682  GAVFWQSRLQKSVALSTTEAEYIAAAEACKELLWMKRFIHELGFKQQRYVVYCDNQSVIH 741

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            LSKNS FH+RSKHI++RY W+++ L + +  +EKIH D NGSDM+TKSLPK K    CS 
Sbjct: 742  LSKNSIFHARSKHIDVRYHWMRDALNDNLFELEKIHIDHNGSDMLTKSLPKEKLEVCCSI 801

Query: 1441 A 1443
            A
Sbjct: 802  A 802


>KYP50580.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 478

 Score =  639 bits (1649), Expect = 0.0
 Identities = 298/438 (68%), Positives = 370/438 (84%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            +DLV  P+ ++ L+N+W++++K E  ++ P YKARLVVKG+ QRKGVDF+EIFSPVVR  
Sbjct: 40   YDLVKLPKGKRALENRWIFKVKQESNSTSPIYKARLVVKGFRQRKGVDFNEIFSPVVRMS 99

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIR +L++A +LDLE+E++DVKT FLHG+LEE++YM QP+GF ++GKE  VC+L+KSLYG
Sbjct: 100  SIRTMLSLATTLDLEVEKMDVKTIFLHGDLEEEIYMKQPDGFLIEGKEDYVCRLRKSLYG 159

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFES M E  YK+T SDHCVF++KF+D DF+ LLLYVDDMLIVGKD  KI
Sbjct: 160  LKQAPRQWYKKFESVMCEQDYKKTTSDHCVFVRKFSDDDFIILLLYVDDMLIVGKDVSKI 219

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
            DRLK  L +SF+MKD+GAAK+ILG+ I RDRK +KLWLSQE YI+ VLQRF+M+  + VS
Sbjct: 220  DRLKKQLGESFSMKDMGAAKKILGISIIRDRKDKKLWLSQEHYIQNVLQRFHMENVKAVS 279

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA HFKL+  QCP N+VEK  M ++PYA AVGSLMYAMVCTRPDIAHAVG VSRFLSN
Sbjct: 280  TPLAAHFKLSVKQCPSNEVEKINMSRVPYAYAVGSLMYAMVCTRPDIAHAVGTVSRFLSN 339

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW AVKWILRYLRGTS + L +GGDKP LVGY+DSD+AG  DS KSTSGYL  +AG
Sbjct: 340  PGREHWNAVKWILRYLRGTSGLKLYFGGDKPTLVGYSDSDMAGDIDSRKSTSGYLVKFAG 399

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            G V+WQS+LQKCVALSTTEAE+IA TE+CKE++W+K+F++ELG  Q ++++YCDSQSAIH
Sbjct: 400  GVVAWQSRLQKCVALSTTEAEFIALTEACKELLWVKKFLQELGFVQDKYLLYCDSQSAIH 459

Query: 1261 LSKNSSFHSRSKHINIRY 1314
            L KN +FHS+SKHI++RY
Sbjct: 460  LGKNQTFHSKSKHIDVRY 477


>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease CAA32025.1 unnamed protein product
            [Nicotiana tabacum]
          Length = 1328

 Score =  669 bits (1725), Expect = 0.0
 Identities = 316/473 (66%), Positives = 396/473 (83%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            + LV+ P+ ++ LK KWV+++K +      RYKARLVVKG+EQ+KG+DFDEIFSPVV+  
Sbjct: 843  YKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMT 902

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIR +L++AASLDLE+EQLDVKT FLHG+LEE++YM QPEGFEV GK+HMVCKL KSLYG
Sbjct: 903  SIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYG 962

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WY KF+SFMK   Y +T SD CV+ ++F++ +F+ LLLYVDDMLIVGKDK  I
Sbjct: 963  LKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLI 1022

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
             +LK DLSKSF MKDLG A++ILGM+I R+R +RKLWLSQE YIE+VL+RFNM  A+PVS
Sbjct: 1023 AKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVS 1082

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA H KL++  CP    EK  M K+PY+SAVGSLMYAMVCTRPDIAHAVGVVSRFL N
Sbjct: 1083 TPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLEN 1142

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHWEAVKWILRYLRGT+  CLC+GG  P L GYTD+D+AG  D+ KS++GYLFT++G
Sbjct: 1143 PGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSG 1202

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GA+SWQSKLQKCVALSTTEAEYIAATE+ KEMIW+KRF++ELG+ Q+ ++VYCDSQSAI 
Sbjct: 1203 GAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAID 1262

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYK 1419
            LSKNS +H+R+KHI++RY WI+E+++++ L + KI T++N +DM+TK +P+ K
Sbjct: 1263 LSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNK 1315


>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1321

 Score =  666 bits (1718), Expect = 0.0
 Identities = 313/473 (66%), Positives = 399/473 (84%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            ++LV  P+ +++LKNKWV+++K +DG+   R+KARLVVKG+ Q++G+DF+EIFSPVV+  
Sbjct: 841  YELVQLPKGRRVLKNKWVFKLK-KDGDKLVRHKARLVVKGFSQKQGIDFEEIFSPVVKMC 899

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIRV+L + AS+DLE+EQLDVKT FLHG+L+E++YM QPEGFEVKGKE MVCKLKKSLYG
Sbjct: 900  SIRVILGLVASMDLELEQLDVKTAFLHGDLDEEIYMEQPEGFEVKGKEDMVCKLKKSLYG 959

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKF+SF+K  G+KRT +D CV+I ++ +G FL LLLYVDDMLIVG+D + I
Sbjct: 960  LKQAPRQWYKKFDSFIKSQGFKRTDADPCVYINRYPNGKFLILLLYVDDMLIVGQDVQMI 1019

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
              LK +LSK+F MKD+GAAK ILGM+I RDRKA KLWLSQE YIE+VL+RFNM  A+PV 
Sbjct: 1020 KNLKVELSKAFDMKDMGAAKHILGMDIIRDRKAGKLWLSQERYIERVLERFNMKNAKPVI 1079

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PL  HFKL++  CP     + KM  IPY+SAVGSLMYAMVCTRPDIAHAVGVVSR+LSN
Sbjct: 1080 TPLVGHFKLSKKSCP---TIREKMSTIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSN 1136

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P   HWEAVKWILRYLRGTS +CL +GG KP L GYTD+D+AG  D  KSTSGY+FT++G
Sbjct: 1137 PGKTHWEAVKWILRYLRGTSKLCLRFGGAKPILEGYTDADMAGDLDDRKSTSGYIFTFSG 1196

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GA+SWQSKLQKC++LSTTEAEY+AATE+ KEM+WMK+F++ELG+KQ+ +IVYCDSQSA+ 
Sbjct: 1197 GAISWQSKLQKCISLSTTEAEYVAATEAGKEMLWMKKFLQELGLKQEEYIVYCDSQSALD 1256

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYK 1419
            LSKN+ +HSR+KHI++RY WI+  +E+++  ++KIHTD N +DM+TK++ + K
Sbjct: 1257 LSKNTMYHSRTKHIDVRYHWIRLAIEKQLFQLKKIHTDRNAADMLTKNVTREK 1309


>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  666 bits (1719), Expect = 0.0
 Identities = 318/473 (67%), Positives = 392/473 (82%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            F+LV  P+N+K LKN+WVYR+K E+G S PR+KARLVVKG+ Q+KG+DFDEIFSPVV+F 
Sbjct: 841  FELVKAPKNRKALKNRWVYRVKHEEGTSVPRFKARLVVKGFSQKKGIDFDEIFSPVVKFS 900

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIRVVL +AA LD+EIEQ+DVKT FLHG+L+E++YM QPEGF+VKGKE  VC+LKKSLYG
Sbjct: 901  SIRVVLGLAARLDIEIEQMDVKTAFLHGDLDEEIYMEQPEGFKVKGKEDYVCRLKKSLYG 960

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKF S M +HGYK+T+SDHCVF+ +++D DF+ LLLYVDDMLIVG++  +I
Sbjct: 961  LKQAPRQWYKKFTSVMSKHGYKKTSSDHCVFVNRYSDDDFVILLLYVDDMLIVGRNASRI 1020

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
              LK +LSKSF+MKD+G AK+ILGM+I RDR+ +KLWLSQE YIEKVL+RF+M++A+PVS
Sbjct: 1021 QELKQELSKSFSMKDMGPAKQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPVS 1080

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PL  HFKL + QCP ++ EK +M+++PY+SAVGSLMYAMVCTRPDIAHAVGVVSRFLSN
Sbjct: 1081 TPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 1140

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW+AVKWILRYLRGTS++ LC+G  KP L GYTDSD+AG  D+ KSTSGYL TYAG
Sbjct: 1141 PGREHWDAVKWILRYLRGTSSLSLCFGTGKPILTGYTDSDMAGDIDTRKSTSGYLITYAG 1200

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAVSWQS+LQKCV LSTTEAE+IA+ E+ KEM+WMK+F++ELG  Q              
Sbjct: 1201 GAVSWQSRLQKCVDLSTTEAEFIASVEASKEMLWMKKFLQELGFVQ-------------- 1246

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYK 1419
                     RSKHI+ RY WI+++LE K+L +EKIHTDDNGSDMMTK+LP+ K
Sbjct: 1247 --------DRSKHIDTRYHWIRDILECKMLELEKIHTDDNGSDMMTKALPRGK 1291


>KYP42640.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 448

 Score =  607 bits (1566), Expect = 0.0
 Identities = 286/438 (65%), Positives = 357/438 (81%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            +DLV  P+ ++ L+N+W++R+K E  ++ PRYKARLVVKG+ QR  VDF+EIFSPVV+  
Sbjct: 14   YDLVKLPKGKRALENRWIFRVKQESNSTSPRYKARLVVKGFRQRNDVDFNEIFSPVVKMS 73

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIR VL++ A+LDLE+EQ+DVKT FLHG LEE++YM QP+GF V+GKE  VC+L+KSLYG
Sbjct: 74   SIRTVLSLVATLDLEVEQMDVKTAFLHGNLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYG 133

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFESFM E GYK+T SDHCVF++KF+D DF+ LLLYVDDMLIV KD  +I
Sbjct: 134  LKQAPRQWYKKFESFMCEQGYKKTTSDHCVFVKKFSDDDFIILLLYVDDMLIVEKDVSRI 193

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
            DRLK  L ++FAMKDLGAAK+ILG+ I    K +KLWLSQE YI+KVLQRF M+ ++ V 
Sbjct: 194  DRLKKQLGEAFAMKDLGAAKKILGISI----KEKKLWLSQEHYIKKVLQRFQMENSKVVG 249

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA HFKL+  Q P N+ EK  M K+PY  AVGSLMY MVCTRPD+A+ VG VSRFLSN
Sbjct: 250  TPLAAHFKLSVKQSPSNEAEKTYMSKVPYVYAVGSLMYPMVCTRPDVAYVVGTVSRFLSN 309

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P+ EHW AVKWILRYL GTS + LC+GGDKP LVGY++SD+AG  DS KSTSGYL  +AG
Sbjct: 310  PSREHWNAVKWILRYLHGTSGLRLCFGGDKPTLVGYSNSDMAGDVDSRKSTSGYLINFAG 369

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            G V+WQS+LQ+CV LSTTEAE+IA TE+CKE++W+K+F++EL   Q ++ ++ DSQS IH
Sbjct: 370  GVVAWQSRLQRCVTLSTTEAEFIAITEACKELLWLKKFLQELDFVQDKYPLFVDSQSVIH 429

Query: 1261 LSKNSSFHSRSKHINIRY 1314
            L KN +FHSRSKHI++RY
Sbjct: 430  LGKNPTFHSRSKHIDVRY 447


>CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  636 bits (1641), Expect = 0.0
 Identities = 308/484 (63%), Positives = 379/484 (78%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            F+LV  P+ ++ LKN+WVYR+K E+  SQPRYKARLVVK  + ++               
Sbjct: 839  FELVKLPKGKRALKNRWVYRVKQEEHTSQPRYKARLVVKRVQSKE--------------- 883

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
                      S DLEI+Q+DVKT FLHG+L++++YM QPEGF +KGKE  VCKLKKSLYG
Sbjct: 884  ----------SFDLEIQQMDVKTAFLHGDLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYG 933

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFES M E GY++T SDHCVF+QKF+D DF+ LLLYVDD+LIV ++  +I
Sbjct: 934  LKQAPRQWYKKFESVMGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVCRNVSRI 993

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
            D LK  LSKSFAMKDLG  KRILG+ I RDR ++KL + QE YIEKV  RFNM K + VS
Sbjct: 994  DNLKKQLSKSFAMKDLGPVKRILGIRIERDRASKKLCMLQEQYIEKVFARFNMSKFKVVS 1053

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA+HFKL+    P  D EK  M ++PYASA+GSLMYAMVCTRPDIA+AVGVVSRFLSN
Sbjct: 1054 SPLASHFKLSSRHSPSTDKEKEDMRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSN 1113

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P   HWEAVKWI+RYLRGTS + L +G  KP LVGYTDSD+AG  D+ KSTSGYL T++G
Sbjct: 1114 PGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSG 1173

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAVSWQS+LQKCVALSTTEAEYIAA E+CKE++WMK F++ELG KQQR++VYCD+QSAIH
Sbjct: 1174 GAVSWQSRLQKCVALSTTEAEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIH 1233

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            LSKNS++H+RSKHI++RY W+++ L + +  IEKIHTD+NGSDM+TK+LP+ K    CS 
Sbjct: 1234 LSKNSTYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSI 1293

Query: 1441 AGLV 1452
            AG++
Sbjct: 1294 AGMI 1297


>KYP42630.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 701

 Score =  607 bits (1566), Expect = 0.0
 Identities = 286/438 (65%), Positives = 357/438 (81%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            +DLV  P+ ++ L+N+W++R+K E  ++ PRYKARLVVKG+ QR  VDF+EIFSPVV+  
Sbjct: 267  YDLVKLPKGKRALENRWIFRVKQESNSTSPRYKARLVVKGFRQRNDVDFNEIFSPVVKMS 326

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            SIR VL++ A+LDLE+EQ+DVKT FLHG LEE++YM QP+GF V+GKE  VC+L+KSLYG
Sbjct: 327  SIRTVLSLVATLDLEVEQMDVKTAFLHGNLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYG 386

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR+WYKKFESFM E GYK+T SDHCVF++KF+D DF+ LLLYVDDMLIV KD  +I
Sbjct: 387  LKQAPRQWYKKFESFMCEQGYKKTTSDHCVFVKKFSDDDFIILLLYVDDMLIVEKDVSRI 446

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
            DRLK  L ++FAMKDLGAAK+ILG+ I    K +KLWLSQE YI+KVLQRF M+ ++ V 
Sbjct: 447  DRLKKQLGEAFAMKDLGAAKKILGISI----KEKKLWLSQEHYIKKVLQRFQMENSKVVG 502

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PLA HFKL+  Q P N+ EK  M K+PY  AVGSLMY MVCTRPD+A+ VG VSRFLSN
Sbjct: 503  TPLAAHFKLSVKQSPSNEAEKTYMSKVPYVYAVGSLMYPMVCTRPDVAYVVGTVSRFLSN 562

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P+ EHW AVKWILRYL GTS + LC+GGDKP LVGY++SD+AG  DS KSTSGYL  +AG
Sbjct: 563  PSREHWNAVKWILRYLHGTSGLRLCFGGDKPTLVGYSNSDMAGDVDSRKSTSGYLINFAG 622

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            G V+WQS+LQ+CV LSTTEAE+IA TE+CKE++W+K+F++EL   Q ++ ++ DSQS IH
Sbjct: 623  GVVAWQSRLQRCVTLSTTEAEFIAITEACKELLWLKKFLQELDFVQDKYPLFVDSQSVIH 682

Query: 1261 LSKNSSFHSRSKHINIRY 1314
            L KN +FHSRSKHI++RY
Sbjct: 683  LGKNPTFHSRSKHIDVRY 700


>KYP59970.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 412

 Score =  579 bits (1492), Expect = 0.0
 Identities = 274/410 (66%), Positives = 337/410 (82%)
 Frame = +1

Query: 235  LDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYGLKQAPRRWYKKFESFMKE 414
            +DVKT FLHG+LEE++YM QP+GF+VKGKE  VC+L+KSLYGLKQAPR+WYKKFESFM +
Sbjct: 1    MDVKTAFLHGDLEEEIYMKQPDGFQVKGKEDCVCRLRKSLYGLKQAPRQWYKKFESFMCD 60

Query: 415  HGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKIDRLKSDLSKSFAMKDLGA 594
             GYK+T SDHCVF++KF++ DF+ LLLYVDDMLIV KD  +IDRLK  L +SFAMKD+GA
Sbjct: 61   QGYKKTTSDHCVFVKKFSNDDFIILLLYVDDMLIVRKDVSRIDRLKKKLGESFAMKDMGA 120

Query: 595  AKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVSCPLANHFKLTRDQCPVND 774
            AK+ILG+ I RDR+  KLWLSQE YI++VLQRF ++ A+ VS P A HFKL+  Q P N 
Sbjct: 121  AKQILGIRIIRDREKWKLWLSQEQYIKRVLQRFQIENAKAVSTPFATHFKLSVKQSPSNK 180

Query: 775  VEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPAMEHWEAVKWILRYLRG 954
             EK  ME++PYASAVGSLMYAMVCTRP IAHAVG VSRFLSNP  EHW +VKWILRYL G
Sbjct: 181  AEKLDMERVPYASAVGSLMYAMVCTRPYIAHAVGTVSRFLSNPGREHWNSVKWILRYLHG 240

Query: 955  TSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAGGAVSWQSKLQKCVALSTT 1134
            T +M LC+GGDKP LVGY+DSD+AG  DS KSTSGYL  +AGGAV+WQS+LQ+CV LSTT
Sbjct: 241  TVDMKLCFGGDKPTLVGYSDSDMAGDVDSRKSTSGYLIKFAGGAVAWQSRLQRCVTLSTT 300

Query: 1135 EAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIHLSKNSSFHSRSKHINIRY 1314
            EAE+IA TE+CKE++W+K+F++ELG  Q ++ ++ DSQSAIHL KN +FHSRSKHI++RY
Sbjct: 301  EAEFIAITEACKELLWLKKFLQELGFVQDKYPLFVDSQSAIHLGKNPTFHSRSKHIDVRY 360

Query: 1315 QWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSRAGLVVTGT 1464
             WI++ L+ K+L + KIHTDDNG++MMTK+LP+ K       AGL V  T
Sbjct: 361  HWIRDALDAKLLELAKIHTDDNGANMMTKALPRGKFEICFEIAGLAVIST 410


>ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  609 bits (1571), Expect = 0.0
 Identities = 286/486 (58%), Positives = 384/486 (79%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            ++LV+ P+ +K + NKWVY+IK +  +   RY+ARLVVKGY Q++G+DF+EIFSPVVR  
Sbjct: 820  WELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLT 879

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            +IRVVLA+ A+LDL +EQLDVKT FLHGELEE++YM QPEGF+ +GKE++VC+L KSLYG
Sbjct: 880  TIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYG 939

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR WYK+F+SF+    Y R +SDHC + ++F   DF+ LLLYVDDML+VG +K ++
Sbjct: 940  LKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRV 999

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
              LK+ L++ F MKDLG A +ILGM+I RDRK RK+WLSQ++Y+ KVL+RFNM   +P+S
Sbjct: 1000 QELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPIS 1059

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PL  +FKL+    P N+ E+ +M ++PYASAVGSLMYAM+CTRPDIA AVGVVSRF+++
Sbjct: 1060 TPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMAD 1119

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW AVK I+RY++GTS + +C+GG +  + GY DSD AG  D  KST+GY+FT AG
Sbjct: 1120 PGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLAG 1179

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAVSW SKLQ  VALSTTEAEY+AAT++CKE IWM+R + ELG KQ++  VYCDSQSA+H
Sbjct: 1180 GAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALH 1239

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            +++N +FHSR+KHI ++Y +++EV+EE  + ++KIHT+DN +D MTKS+   K ++  S 
Sbjct: 1240 IARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADAMTKSINTDKFIWCRSL 1299

Query: 1441 AGLVVT 1458
             GL+ T
Sbjct: 1300 YGLLET 1305


>ACL97386.1 Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  609 bits (1570), Expect = 0.0
 Identities = 286/486 (58%), Positives = 384/486 (79%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            ++LV+ P+ +K + NKWVY+IK +  +   RY+ARLVVKGY Q++G+DF+EIFSPVVR  
Sbjct: 820  WELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLT 879

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            +IRVVLA+ A+LDL +EQLDVKT FLHGELEE++YM QPEGF+ +GKE++VC+L KSLYG
Sbjct: 880  TIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYG 939

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR WYK+F+SF+    Y R +SDHC + ++F   DF+ LLLYVDDML+VG +K ++
Sbjct: 940  LKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRV 999

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
              LK+ L++ F MKDLG A +ILGM+I RDRK RK+WLSQ++Y+ KVL+RFNM   +P+S
Sbjct: 1000 QELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPIS 1059

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PL  +FKL+    P N+ E+ +M ++PYASAVGSLMYAM+CTRPDIA AVGVVSRF+++
Sbjct: 1060 TPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMAD 1119

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW AVK I+RY++GTS + +C+GG +  + GY DSD AG  D  KST+GY+FT AG
Sbjct: 1120 PGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVWGYVDSDFAGDHDKRKSTTGYVFTLAG 1179

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAVSW SKLQ  VALSTTEAEY+AAT++CKE IWM+R + ELG KQ++  VYCDSQSA+H
Sbjct: 1180 GAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALH 1239

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            +++N +FHSR+KHI ++Y +++EV+EE  + ++KIHT+DN +D+MTK +   K V+  S 
Sbjct: 1240 IARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINTDKFVWCRSS 1299

Query: 1441 AGLVVT 1458
             GL+ T
Sbjct: 1300 YGLLET 1305


>ACL97383.1 Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  607 bits (1564), Expect = 0.0
 Identities = 285/486 (58%), Positives = 383/486 (78%)
 Frame = +1

Query: 1    FDLVDKPENQKILKNKWVYRIKTEDGNSQPRYKARLVVKGYEQRKGVDFDEIFSPVVRFP 180
            ++LV+ P+ +K + NKWVY+IK +  +   RY+ARLVVKGY Q++G+DF+EIFSPVVR  
Sbjct: 820  WELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLT 879

Query: 181  SIRVVLAIAASLDLEIEQLDVKTTFLHGELEEDVYMAQPEGFEVKGKEHMVCKLKKSLYG 360
            +IRVVLA+ A+LDL +EQLDVKT FLHGELEE++YM QPEGF+ +GKE++VC+L KSLYG
Sbjct: 880  TIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYG 939

Query: 361  LKQAPRRWYKKFESFMKEHGYKRTASDHCVFIQKFADGDFLTLLLYVDDMLIVGKDKKKI 540
            LKQAPR WYK+F+SF+    Y R +SDHC + ++F   DF+ LLLYVDDML+VG +K ++
Sbjct: 940  LKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRV 999

Query: 541  DRLKSDLSKSFAMKDLGAAKRILGMEITRDRKARKLWLSQESYIEKVLQRFNMDKAEPVS 720
              LK+ L++ F MKDLG A +ILGM+I RDRK  K+WLSQ++Y+ KVL+RFNM   +P+S
Sbjct: 1000 QELKAQLAREFDMKDLGPANKILGMQIHRDRKDMKIWLSQKNYLRKVLRRFNMQDCKPIS 1059

Query: 721  CPLANHFKLTRDQCPVNDVEKRKMEKIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSN 900
             PL  +FKL+    P N+ E+ +M ++PYASAVGSLMYAM+CTRPDIA AVGVVSRF+++
Sbjct: 1060 TPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMAD 1119

Query: 901  PAMEHWEAVKWILRYLRGTSNMCLCYGGDKPELVGYTDSDLAGAQDSLKSTSGYLFTYAG 1080
            P  EHW AVK I+RY++GTS + +C+GG +  + GY DSD AG  D  KST+GY+FT AG
Sbjct: 1120 PGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLAG 1179

Query: 1081 GAVSWQSKLQKCVALSTTEAEYIAATESCKEMIWMKRFVRELGVKQQRFIVYCDSQSAIH 1260
            GAVSW SKLQ  VALSTTEAEY+AAT++CKE IWM+R + ELG KQ++  VYCDSQSA+H
Sbjct: 1180 GAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALH 1239

Query: 1261 LSKNSSFHSRSKHINIRYQWIQEVLEEKVLYIEKIHTDDNGSDMMTKSLPKYKHVYFCSR 1440
            +++N +FHSR+KHI ++Y +++EV+EE  + ++KIHT+DN +D+MTK +   K V+  S 
Sbjct: 1240 IARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINADKFVWCRSS 1299

Query: 1441 AGLVVT 1458
             GL+ T
Sbjct: 1300 YGLLET 1305