BLASTX nr result

ID: Papaver32_contig00021788 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00021788
         (1427 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EMT00238.1 Histone H2A [Aegilops tauschii]                             52   2e-07
EMS53369.1 Protein H2A.6 [Triticum urartu]                             48   1e-06

>EMT00238.1 Histone H2A [Aegilops tauschii]
          Length = 127

 Score = 52.4 bits (124), Expect(2) = 2e-07
 Identities = 34/76 (44%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = -1

Query: 575 FPSWKNGSLLEESRYAERVGTGAPXXXXXXXXXXXXXXXXXAG-NVASGGVLPNINVVLL 399
           FP  + G  L++ RYA+RVGTGAP                 AG  +A GGV+P IN VLL
Sbjct: 37  FPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLENDEELGKLLAGVTIAHGGVIPKINPVLL 96

Query: 398 PNK-AEKSTVTPDSSK 354
           P K AEK    P S K
Sbjct: 97  PKKTAEKEGKAPKSPK 112



 Score = 33.1 bits (74), Expect(2) = 2e-07
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -2

Query: 601 TKSVKAGLTFPVGRMARY 548
           T+SVKAGL FPVGR+ RY
Sbjct: 28  TRSVKAGLQFPVGRIGRY 45


>EMS53369.1 Protein H2A.6 [Triticum urartu]
          Length = 104

 Score = 48.1 bits (113), Expect(2) = 1e-06
 Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = -1

Query: 575 FPSWKNGSLLEESRYAERVGTGAPXXXXXXXXXXXXXXXXXAGNVASGGVLPNINVVLLP 396
           FP  + G  L++ RYA+RVG+GAP                    +A GGV+PNIN VLLP
Sbjct: 23  FPVGRIGRYLKKGRYAQRVGSGAPELGKLLAGV----------TIAHGGVIPNINSVLLP 72

Query: 395 NK----AEKSTVTP 366
            K    AEK   +P
Sbjct: 73  KKSPAAAEKEAKSP 86



 Score = 34.7 bits (78), Expect(2) = 1e-06
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -2

Query: 604 VTKSVKAGLTFPVGRMARY 548
           VT+SVKAGL FPVGR+ RY
Sbjct: 13  VTRSVKAGLQFPVGRIGRY 31


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