BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00015993
         (1271 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002272444.2 PREDICTED: RNA polymerase sigma factor sigD, chlo...   194   3e-88
CBI24961.3 unnamed protein product, partial [Vitis vinifera]          194   3e-88
XP_010269782.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   194   1e-85
XP_006851106.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   190   2e-82
XP_010103268.1 RNA polymerase sigma factor rpoD [Morus notabilis...   169   7e-79
XP_006438958.1 hypothetical protein CICLE_v10033747mg [Citrus cl...   169   8e-77
XP_006482924.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   169   2e-76
XP_018817139.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   159   5e-76
XP_006379084.1 hypothetical protein POPTR_0009s06210g [Populus t...   170   2e-75
XP_004308689.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   177   9e-75
XP_011025491.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   169   2e-74
XP_010922212.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   160   8e-74
XP_009354359.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   172   1e-73
XP_015063095.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   154   1e-73
XP_006379083.1 hypothetical protein POPTR_0009s06210g [Populus t...   163   2e-73
XP_010324724.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   153   3e-73
XP_007219201.1 hypothetical protein PRUPE_ppa017025mg [Prunus pe...   166   1e-72
XP_008806591.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   157   1e-72
XP_006345495.2 PREDICTED: RNA polymerase sigma factor sigD, chlo...   151   3e-72
XP_012065613.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   167   7e-72

>XP_002272444.2 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Vitis vinifera]
          Length = 442

 Score =  194 bits (494), Expect(2) = 3e-88
 Identities = 99/143 (69%), Positives = 118/143 (82%)
 Frame = +2

Query: 194 LTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQ 373
           LT +EEAEF + LKE A LEAAR ++ A+TR+ EPT ++WAEAVG+KRSSL++ +    +
Sbjct: 146 LTPREEAEFCLCLKEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLCNGRE 204

Query: 374 SRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWW 553
           SR RI  SYRRLVVSIA  YQGKGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWW
Sbjct: 205 SRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWW 264

Query: 554 IKQAIIRAIEQKSRTIRLPLVMC 622
           I+QAI+RAI  KSR IRLP  +C
Sbjct: 265 IRQAIVRAIANKSRIIRLPGSIC 287



 Score =  160 bits (406), Expect(2) = 3e-88
 Identities = 85/161 (52%), Positives = 112/161 (69%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            GS+CEMVAKIA+  T L+ +L R PTY+EIA+   ++VS +RL S+ +RTPIS+DQ   T
Sbjct: 284  GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQA-VT 342

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              GC+TL+EIIPGPDET P+ MV+RQ MKQ               ++L L+FG+NG+TP 
Sbjct: 343  SQGCMTLQEIIPGPDETTPQKMVKRQLMKQE-VERALNTLCEREAYILRLYFGINGETPL 401

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVYAL 1109
            S +EIGR++ LSRERVRQI   AL+KLR  S  D L +Y +
Sbjct: 402  SFEEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYMM 442


>CBI24961.3 unnamed protein product, partial [Vitis vinifera]
          Length = 319

 Score =  194 bits (494), Expect(2) = 3e-88
 Identities = 99/143 (69%), Positives = 118/143 (82%)
 Frame = +2

Query: 194 LTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQ 373
           LT +EEAEF + LKE A LEAAR ++ A+TR+ EPT ++WAEAVG+KRSSL++ +    +
Sbjct: 23  LTPREEAEFCLCLKEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLCNGRE 81

Query: 374 SRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWW 553
           SR RI  SYRRLVVSIA  YQGKGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWW
Sbjct: 82  SRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWW 141

Query: 554 IKQAIIRAIEQKSRTIRLPLVMC 622
           I+QAI+RAI  KSR IRLP  +C
Sbjct: 142 IRQAIVRAIANKSRIIRLPGSIC 164



 Score =  160 bits (406), Expect(2) = 3e-88
 Identities = 85/161 (52%), Positives = 112/161 (69%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            GS+CEMVAKIA+  T L+ +L R PTY+EIA+   ++VS +RL S+ +RTPIS+DQ   T
Sbjct: 161  GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQA-VT 219

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              GC+TL+EIIPGPDET P+ MV+RQ MKQ               ++L L+FG+NG+TP 
Sbjct: 220  SQGCMTLQEIIPGPDETTPQKMVKRQLMKQE-VERALNTLCEREAYILRLYFGINGETPL 278

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVYAL 1109
            S +EIGR++ LSRERVRQI   AL+KLR  S  D L +Y +
Sbjct: 279  SFEEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYMM 319


>XP_010269782.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Nelumbo
           nucifera]
          Length = 455

 Score =  194 bits (493), Expect(2) = 1e-85
 Identities = 97/140 (69%), Positives = 115/140 (82%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YLT KEEAEFS+ LKE ARLEAAR +L  +T + EPT S+WAEA GM+ ++L++ + +  
Sbjct: 158 YLTPKEEAEFSLYLKEEARLEAARTRL-RETNEHEPTSSQWAEAAGMRGATLDKMLCQAR 216

Query: 371 QSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +SR RI  SYRRL+ SIA+ YQGKGLSLQDL+QEGSIGLLRG ERFDP KG+KLSTYVYW
Sbjct: 217 ESRERIVFSYRRLIFSIASGYQGKGLSLQDLIQEGSIGLLRGXERFDPRKGYKLSTYVYW 276

Query: 551 WIKQAIIRAIEQKSRTIRLP 610
           WIKQAIIRAI  KSR +RLP
Sbjct: 277 WIKQAIIRAIASKSRMVRLP 296



 Score =  152 bits (384), Expect(2) = 1e-85
 Identities = 85/161 (52%), Positives = 112/161 (69%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            GS+ EM+AKIA+ NT L+++LGR PTY+EIAD  GI VS + L  + +R P+S+D+T   
Sbjct: 297  GSVSEMMAKIAEANTVLSTRLGRVPTYDEIADMLGICVSTVSLLCERSRPPMSVDRTYSD 356

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
             HGC+ L+EII GP+ET PETMV RQ MKQ                +L L+FGLNG+TP 
Sbjct: 357  -HGCMKLQEIISGPEETTPETMVNRQLMKQEVERLLKILGEREAN-ILRLYFGLNGETPC 414

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVYAL 1109
            S +EIGR+L+LSRERVRQI   ALAKL+ ++  D+L +Y L
Sbjct: 415  SFEEIGRLLNLSRERVRQIYYIALAKLQQSNTIDDLRLYFL 455


>XP_006851106.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
           [Amborella trichopoda] ERN12687.1 hypothetical protein
           AMTR_s00025p00248060 [Amborella trichopoda]
          Length = 449

 Score =  190 bits (482), Expect(2) = 2e-82
 Identities = 97/145 (66%), Positives = 116/145 (80%)
 Frame = +2

Query: 188 NYLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRI 367
           +YLT +EEAEFS+ L+EGARLE  R KL  + R  EP+  +WAEAVGM+ SS+ER +   
Sbjct: 149 DYLTRREEAEFSLCLREGARLEGIRRKL-REKRGREPSRGQWAEAVGMRESSMERRLGIA 207

Query: 368 SQSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVY 547
            + RNRIT SYRRLVVSIAT+Y GKG+SL DL+QEGS+GLLRGAERFD  +G+KLSTYVY
Sbjct: 208 RECRNRITNSYRRLVVSIATSYPGKGMSLSDLIQEGSLGLLRGAERFDHRRGYKLSTYVY 267

Query: 548 WWIKQAIIRAIEQKSRTIRLPLVMC 622
           WWIKQAII+AI  KSR +RLP  MC
Sbjct: 268 WWIKQAIIKAIATKSRIVRLPGSMC 292



 Score =  145 bits (367), Expect(2) = 2e-82
 Identities = 81/156 (51%), Positives = 105/156 (67%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            GSMC  VAK+++ +  L S+LGR P+ EEIA+  GI +S +RL ++  R P+S+DQ P  
Sbjct: 289  GSMCATVAKVSEASGVLMSRLGRRPSQEEIAEKTGIALSRVRLVTERCRLPLSIDQ-PLG 347

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
             HG ++LK+II GP+ETRPE MV+R+ MK                 V  L FG+NG+TPK
Sbjct: 348  RHGDISLKDIIAGPEETRPEEMVKREWMKGTMEMLLQTLSEREECIVR-LQFGMNGETPK 406

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNL 1094
            SCDEIGR+L+LSRERVRQI   ALAKLR   AT +L
Sbjct: 407  SCDEIGRLLNLSRERVRQIHYIALAKLRQQHATQHL 442


>XP_010103268.1 RNA polymerase sigma factor rpoD [Morus notabilis] EXB95293.1 RNA
           polymerase sigma factor rpoD [Morus notabilis]
          Length = 422

 Score =  169 bits (429), Expect(2) = 7e-79
 Identities = 85/144 (59%), Positives = 111/144 (77%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YL+ +EEAE  + LKEGA+LEA R ++  ++   EPT  E A+A+GM+  S+++ +    
Sbjct: 122 YLSPREEAECCLILKEGAKLEATRLRM-TNSEDHEPTSKELAKAMGMEMRSIDKMLCDKR 180

Query: 371 QSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +S+ RI+ SYRRLVVS+A  YQGKGLS  DL+QEGS+GLLRGA++FDP +G KLSTYVYW
Sbjct: 181 ESQERISRSYRRLVVSVAAGYQGKGLSFPDLIQEGSVGLLRGAQKFDPQRGNKLSTYVYW 240

Query: 551 WIKQAIIRAIEQKSRTIRLPLVMC 622
           WI+QAIIRAIE KSR +RLP  MC
Sbjct: 241 WIRQAIIRAIENKSRVVRLPGNMC 264



 Score =  154 bits (390), Expect(2) = 7e-79
 Identities = 80/158 (50%), Positives = 105/158 (66%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            G+MC +VAK+ + N  L  +L R+PTY+EIA   G+ VS +RL S+  R PISLD+   T
Sbjct: 261  GNMCGIVAKVTEANNVLNKRLRRFPTYDEIAQVVGVHVSTVRLVSERIRPPISLDRAI-T 319

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              GC+TL+EIIPGP+E  PE MVR+Q MKQ                VL LHFGL+GD P 
Sbjct: 320  ERGCMTLQEIIPGPEEISPEKMVRKQLMKQEIEKLLKTVLSDREANVLRLHFGLSGDIPL 379

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGV 1100
            SC+EIGR+L LSRER+RQI G AL+KL+  +  ++L +
Sbjct: 380  SCEEIGRLLKLSRERIRQINGIALSKLQQTNIVNDLRI 417


>XP_006438958.1 hypothetical protein CICLE_v10033747mg [Citrus clementina]
           ESR52198.1 hypothetical protein CICLE_v10033747mg
           [Citrus clementina]
          Length = 436

 Score =  169 bits (428), Expect(2) = 8e-77
 Identities = 88/140 (62%), Positives = 106/140 (75%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YLT  EEAE    LKEGA+LE AR K  A   + E    + A+A GMK+S +++ + +  
Sbjct: 139 YLTPSEEAEICYSLKEGAKLEEAR-KTVAQAEEHESISKQLAKATGMKQSKVDKILCKER 197

Query: 371 QSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +S+ RI  SYR LVVSIAT YQGKGLSL+DL+QEGSIGLLRGA+RF+P +G+KLSTYVYW
Sbjct: 198 ESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYW 257

Query: 551 WIKQAIIRAIEQKSRTIRLP 610
           WIKQAIIR I  KSRTIRLP
Sbjct: 258 WIKQAIIRTIANKSRTIRLP 277



 Score =  148 bits (373), Expect(2) = 8e-77
 Identities = 86/159 (54%), Positives = 103/159 (64%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            GSM  MVAKIA+ N  L+ +L R PT  EIA+   I VS +RLA +  R PISLD    T
Sbjct: 278  GSMSGMVAKIAEANNVLSRRLRRMPTDNEIAEMLNIHVSTVRLAIERTRHPISLDGAI-T 336

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              GC+TL++IIPGPDET PE MV++Q MKQ                +L LHFGL+G TP 
Sbjct: 337  DTGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREAD-ILRLHFGLDGQTPV 395

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVY 1103
            SC EIGR+L LSRERVRQIRG AL KL+  +  +NL VY
Sbjct: 396  SCKEIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVY 434


>XP_006482924.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Citrus
           sinensis]
          Length = 436

 Score =  169 bits (428), Expect(2) = 2e-76
 Identities = 88/140 (62%), Positives = 106/140 (75%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YLT  EEAE    LKEGA+LE AR K  A   + E    + A+A GMK+S +++ + +  
Sbjct: 139 YLTPSEEAEICYSLKEGAKLEEAR-KTVAQAEEHESISKQLAKATGMKQSKVDKILCKER 197

Query: 371 QSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +S+ RI  SYR LVVSIAT YQGKGLSL+DL+QEGSIGLLRGA+RF+P +G+KLSTYVYW
Sbjct: 198 ESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYW 257

Query: 551 WIKQAIIRAIEQKSRTIRLP 610
           WIKQAIIR I  KSRTIRLP
Sbjct: 258 WIKQAIIRTIANKSRTIRLP 277



 Score =  147 bits (370), Expect(2) = 2e-76
 Identities = 86/159 (54%), Positives = 103/159 (64%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            GSM  MVAKIA+ N  L+ +L R PT  EIA+   I VS +RLA +  R PISLD    T
Sbjct: 278  GSMSGMVAKIAEANNVLSRRLRRMPTDSEIAEMLNIHVSNVRLAIERTRHPISLDGAI-T 336

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              GC+TL++IIPGPDET PE MV++Q MKQ                +L LHFGL+G TP 
Sbjct: 337  DTGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREAD-ILRLHFGLDGQTPV 395

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVY 1103
            SC EIGR+L LSRERVRQIRG AL KL+  +  +NL VY
Sbjct: 396  SCKEIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVY 434


>XP_018817139.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Juglans regia]
          Length = 426

 Score =  159 bits (401), Expect(2) = 5e-76
 Identities = 81/143 (56%), Positives = 109/143 (76%)
 Frame = +2

Query: 194 LTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQ 373
           L+++EEAE  + +KEGARLE A  ++    +  +PT  + A+A+GM+RS +++ +     
Sbjct: 131 LSSREEAELCLCVKEGARLEVASTRI-TKAQGRQPTSKQLAKAIGMERS-VDKILCDGRD 188

Query: 374 SRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWW 553
           SR RI+ SYRRLVVSIA  YQGKGLS +DL+QEGSIGLLRG E+F+P +G++LSTYVYWW
Sbjct: 189 SRERISRSYRRLVVSIAKGYQGKGLSFRDLIQEGSIGLLRGVEKFEPERGYRLSTYVYWW 248

Query: 554 IKQAIIRAIEQKSRTIRLPLVMC 622
           IKQAII+AI  +SR +RLP  MC
Sbjct: 249 IKQAIIKAIANESRIVRLPGHMC 271



 Score =  155 bits (393), Expect(2) = 5e-76
 Identities = 82/159 (51%), Positives = 106/159 (66%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            G MC MVA+ A+    L+ KLGR PT++EIA+   + +S++RL S+ NR PISLD+   T
Sbjct: 268  GHMCRMVARTAEARNLLSKKLGRLPTHDEIAEVLNVHISIVRLVSERNRPPISLDRAI-T 326

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              G +TL+EII GPDET PE MV++Q MKQ                +L LHFGLNG+ P+
Sbjct: 327  DQGSITLQEIISGPDETTPEKMVKKQLMKQELEKLLTSLDKREEH-ILRLHFGLNGEPPR 385

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVY 1103
            SC+EIGR+L LSRER+RQI G AL+KLR  S  D L +Y
Sbjct: 386  SCEEIGRMLKLSRERIRQINGIALSKLRQTSVVDILELY 424


>XP_006379084.1 hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           ERP56881.1 hypothetical protein POPTR_0009s06210g
           [Populus trichocarpa]
          Length = 423

 Score =  170 bits (430), Expect(2) = 2e-75
 Identities = 89/161 (55%), Positives = 118/161 (73%)
 Frame = +2

Query: 128 EVDARNEYLEKXXXXXXXXXNYLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTIS 307
           E D  +EY  K          YL+ KEEAEFSM LK  AR+EAAR ++  + ++ +PT  
Sbjct: 106 ERDGGHEY--KRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRI-GEVQELDPTSK 162

Query: 308 EWAEAVGMKRSSLERAILRISQSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGL 487
           + A+A+ M+++S++  + +  +SR +I  SYRRLVVSIAT+YQ KGLSLQDL+QEGSIGL
Sbjct: 163 QLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGL 222

Query: 488 LRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLP 610
           LRGAERFDP +G+KLSTYVYWWIK+AI+ AI   +R +RLP
Sbjct: 223 LRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMVRLP 263



 Score =  142 bits (358), Expect(2) = 2e-75
 Identities = 78/156 (50%), Positives = 102/156 (65%)
 Frame = +3

Query: 642  MVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPTLHGCV 821
            +VAKIA  N  L++KL R P+Y+EIA    + VS +RL  +  R+PISLDQ     +  +
Sbjct: 269  LVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNS-L 327

Query: 822  TLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPKSCDEI 1001
            TL+EIIPGPDET PE MV+R+ +KQ                +L LHFGLNG TP+SC+EI
Sbjct: 328  TLQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEI 387

Query: 1002 GRVLHLSRERVRQIRGSALAKLRDASATDNLGVYAL 1109
            GR++ LSRERVRQI G+AL+KLR     + L  YA+
Sbjct: 388  GRLVKLSRERVRQIIGTALSKLRHKEIVEPLKAYAV 423


>XP_004308689.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
           [Fragaria vesca subsp. vesca]
          Length = 452

 Score =  177 bits (448), Expect(2) = 9e-75
 Identities = 94/171 (54%), Positives = 122/171 (71%), Gaps = 1/171 (0%)
 Frame = +2

Query: 113 GVNFFEVDARNEYLEKXXXXXXXXX-NYLTAKEEAEFSMDLKEGARLEAARNKLWADTRK 289
           G+  F+ + RN  LE            YL+ +EEA+  M LKEGA+LE+ R + + + ++
Sbjct: 128 GLECFDDEERNRELEDGRFSFGVVSYGYLSPREEADCCMSLKEGAKLESERTR-FTEAQE 186

Query: 290 EEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQ 469
            EPT  + A A+ +K SS+++ I    +S+ RI  SYR LVVS+A++YQGKGLSLQDL+Q
Sbjct: 187 HEPTSKQLANAMRIKMSSIDKVICNRRESQERIIKSYRGLVVSVASSYQGKGLSLQDLIQ 246

Query: 470 EGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPLVMC 622
           EGSIGLLRGAE+FDP +G KLSTYVYWWI+QAIIRAIE KSR IRLP  MC
Sbjct: 247 EGSIGLLRGAEKFDPERGLKLSTYVYWWIRQAIIRAIENKSRIIRLPGHMC 297



 Score =  133 bits (335), Expect(2) = 9e-75
 Identities = 71/159 (44%), Positives = 100/159 (62%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            G MC ++AKI +       +  R P+++EIA+   +  S++RL  + +R P+SLD+   T
Sbjct: 294  GHMCGVMAKITRAKKNFNQRFQRLPSHDEIAEMINVQASIVRLVCERSRLPLSLDRVV-T 352

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              GC+ L++II GPDE  PETM+++Q MKQ                VL LHFGLNGDTP+
Sbjct: 353  DQGCMALQDIIRGPDEMMPETMLKKQLMKQEMEKLLNRLSDREAE-VLRLHFGLNGDTPQ 411

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVY 1103
            S +EIGR+L LSRERVRQI   AL+KL+  S  ++L +Y
Sbjct: 412  SFEEIGRLLKLSRERVRQINSIALSKLKQTSTLEDLKLY 450


>XP_011025491.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Populus euphratica]
          Length = 423

 Score =  169 bits (429), Expect(2) = 2e-74
 Identities = 84/140 (60%), Positives = 112/140 (80%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YL+ KEEAEFSM LK  AR+EAAR ++  D ++ +PT  + A+A+ M++++++  + +  
Sbjct: 125 YLSPKEEAEFSMCLKHEARIEAARRRI-GDVQELDPTSKQLAKALRMEKNTVDNVLCKGR 183

Query: 371 QSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +SR +I  SYRRLVVSIAT+YQ KGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYW
Sbjct: 184 ESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYW 243

Query: 551 WIKQAIIRAIEQKSRTIRLP 610
           WIK+AI+ AI   +R +RLP
Sbjct: 244 WIKEAILTAISNNTRMVRLP 263



 Score =  139 bits (351), Expect(2) = 2e-74
 Identities = 77/156 (49%), Positives = 102/156 (65%)
 Frame = +3

Query: 642  MVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPTLHGCV 821
            +VAKIA  N  L++KL R P+Y+EIA+   + VS +RL  +  R+PISLDQ     +  +
Sbjct: 269  LVAKIAGANNDLSNKLRRSPSYDEIAEVLNMKVSTVRLGFERGRSPISLDQAVLGQNS-L 327

Query: 822  TLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPKSCDEI 1001
            TL+EIIPGPDET PE MV+R+ +KQ                +L LHFGLNG TP+SC+EI
Sbjct: 328  TLQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEI 387

Query: 1002 GRVLHLSRERVRQIRGSALAKLRDASATDNLGVYAL 1109
            GR++ LSRERVRQI  +AL+KLR     + L  YA+
Sbjct: 388  GRLVKLSRERVRQIICTALSKLRHKRIVEPLKAYAV 423


>XP_010922212.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Elaeis
           guineensis]
          Length = 455

 Score =  160 bits (405), Expect(2) = 8e-74
 Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
 Frame = +2

Query: 143 NEYLEKXXXXXXXXXNYLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAE- 319
           N YL +          YLT +EEAEFS  LK+ A LE A  ++    R+  P  S  A  
Sbjct: 144 NSYLIEGCSSRSERSRYLTTREEAEFSRYLKQEAMLETAGKQI----RECSPLDSGCAAI 199

Query: 320 AVGMKRSSLERAILRISQSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGA 499
           A  MKR   ER +L+  + R RITLSY+RLVVSIAT YQGKGLSLQDL+QEG IGLLRGA
Sbjct: 200 AARMKRRHSERTLLKARECRERITLSYKRLVVSIATPYQGKGLSLQDLIQEGCIGLLRGA 259

Query: 500 ERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPLVMC 622
            RFD  KG+KLSTY YWWI+QAI++AI  KSR +RLP  +C
Sbjct: 260 WRFDYKKGYKLSTYAYWWIRQAILKAIANKSRMVRLPGNLC 300



 Score =  147 bits (370), Expect(2) = 8e-74
 Identities = 77/149 (51%), Positives = 103/149 (69%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            G++CE   KI K+N+ L  +LGR PTY+EIAD  GI  S +R+ S+ +R PIS+DQ  P 
Sbjct: 297  GNLCEAANKIMKSNSLLRKQLGRNPTYDEIADFTGIGASSVRIISERSRHPISVDQ--PV 354

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
                +TLK+IIPGPDE RPE +V RQ+M QN              +++ LH+GLNG+T +
Sbjct: 355  NKQGLTLKDIIPGPDEIRPEVLVNRQEMLQNMEKLLKTLSGREQ-YIITLHYGLNGETAR 413

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRD 1073
            SCDEIGR+L+LSRER+RQI  SAL +LR+
Sbjct: 414  SCDEIGRLLNLSRERIRQIHCSALRRLRE 442


>XP_009354359.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Pyrus x
           bretschneideri]
          Length = 436

 Score =  172 bits (435), Expect(2) = 1e-73
 Identities = 85/144 (59%), Positives = 116/144 (80%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           +L++KEEAE  + LKEGARLE+ R ++  D  ++EPT  + A+A+GMK  S+++ + +  
Sbjct: 139 HLSSKEEAECCLSLKEGARLESRRLRVVED-EEQEPTSKQLAKAMGMKTRSIDKVLCKKR 197

Query: 371 QSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +S+ RI  SYR L+VS+A++YQGKGLS QDL+QEGSIGLLRGAE+FD  +G KLSTYVYW
Sbjct: 198 ESQERIIRSYRGLIVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHERGCKLSTYVYW 257

Query: 551 WIKQAIIRAIEQKSRTIRLPLVMC 622
           WI+QAIIRA+++KSR IRLP+ MC
Sbjct: 258 WIRQAIIRALDKKSRIIRLPVNMC 281



 Score =  134 bits (338), Expect(2) = 1e-73
 Identities = 71/158 (44%), Positives = 101/158 (63%)
 Frame = +3

Query: 630  SMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPTL 809
            +MC M+AKI K   +   ++ R PTY+EIA    +  + ++L  + +R PISLD+   T+
Sbjct: 279  NMCGMMAKITKAKNSFNQRIQRLPTYDEIAQEVNVHAATVKLVCERSRPPISLDRVV-TV 337

Query: 810  HGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPKS 989
             GC++L+EI+ GP+E  PE M+ +Q MKQ               +VL L FGL+G+TPKS
Sbjct: 338  QGCMSLQEIMQGPEEMMPEKMLTKQLMKQEVEKLLKTLSDREA-YVLRLRFGLHGETPKS 396

Query: 990  CDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVY 1103
             +EIGR+L LSRERVRQI G AL+KL+  S  +NL +Y
Sbjct: 397  FEEIGRLLKLSRERVRQINGIALSKLKQTSTFNNLKLY 434


>XP_015063095.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Solanum
            pennellii]
          Length = 423

 Score =  154 bits (390), Expect(2) = 1e-73
 Identities = 81/159 (50%), Positives = 108/159 (67%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            GS+ E+V KI   NT L+ KL R P+Y+EIA+  G+DVS +RL ++ NR PIS+DQ   T
Sbjct: 264  GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVTERNRAPISIDQIVTT 323

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              G ++L+ II GP++T PE  V+RQ MKQ+               +L LHFGLNGDTP+
Sbjct: 324  -QGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILQNVLCDREAKILKLHFGLNGDTPQ 382

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVY 1103
            S +EIGRVL LSRER+RQI  +AL+KLR++S  DN  +Y
Sbjct: 383  SFEEIGRVLKLSRERIRQINCTALSKLRESSMLDNFKMY 421



 Score =  152 bits (383), Expect(2) = 1e-73
 Identities = 77/140 (55%), Positives = 103/140 (73%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YLT KEEA++S  LKE AR+E  R K+  +T + + +  + A+A GM    L++ ++   
Sbjct: 125 YLTHKEEAKYSWYLKEEARIEILR-KMVEETSEIDLSSKQLAKAAGMSTRRLDKLLINAK 183

Query: 371 QSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +S+ +I   YR LVVS+A +YQGKGLSLQDL+QEGSIGLL GA++F+P KG+KLSTY YW
Sbjct: 184 ESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGLLHGAKKFNPKKGYKLSTYAYW 243

Query: 551 WIKQAIIRAIEQKSRTIRLP 610
           WI+QAI RA+  KSR IRLP
Sbjct: 244 WIRQAISRAVANKSRVIRLP 263


>XP_006379083.1 hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           ERP56880.1 hypothetical protein POPTR_0009s06210g
           [Populus trichocarpa]
          Length = 419

 Score =  163 bits (413), Expect(2) = 2e-73
 Identities = 87/159 (54%), Positives = 115/159 (72%)
 Frame = +2

Query: 128 EVDARNEYLEKXXXXXXXXXNYLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTIS 307
           E D  +EY  K          YL+ KEEAEFSM LK  AR+EAAR ++  + ++ +PT  
Sbjct: 106 ERDGGHEY--KRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRI-GEVQELDPTSK 162

Query: 308 EWAEAVGMKRSSLERAILRISQSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGL 487
           + A+A+ M+++S++  + +  +SR +I  SYRRLVVSIAT+YQ KGLSLQDL+QEGSIGL
Sbjct: 163 QLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGL 222

Query: 488 LRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIR 604
           LRGAERFDP +G+KLSTYVYWWIK+AI+ AI   +R  R
Sbjct: 223 LRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMRR 261



 Score =  142 bits (358), Expect(2) = 2e-73
 Identities = 78/156 (50%), Positives = 102/156 (65%)
 Frame = +3

Query: 642  MVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPTLHGCV 821
            +VAKIA  N  L++KL R P+Y+EIA    + VS +RL  +  R+PISLDQ     +  +
Sbjct: 265  LVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNS-L 323

Query: 822  TLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPKSCDEI 1001
            TL+EIIPGPDET PE MV+R+ +KQ                +L LHFGLNG TP+SC+EI
Sbjct: 324  TLQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEI 383

Query: 1002 GRVLHLSRERVRQIRGSALAKLRDASATDNLGVYAL 1109
            GR++ LSRERVRQI G+AL+KLR     + L  YA+
Sbjct: 384  GRLVKLSRERVRQIIGTALSKLRHKEIVEPLKAYAV 419


>XP_010324724.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform X1
            [Solanum lycopersicum]
          Length = 423

 Score =  153 bits (387), Expect(2) = 3e-73
 Identities = 81/159 (50%), Positives = 107/159 (67%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            GS+ E+V KI   NT L+ KL R P+Y+EIA+  G+DVS +RL  + NR PIS+DQ   T
Sbjct: 264  GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQIVTT 323

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              G ++L+ II GP++T PE  V+RQ MKQ+               +L LHFGLNGDTP+
Sbjct: 324  -QGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILQNVLCDREAKILKLHFGLNGDTPQ 382

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVY 1103
            S +EIGRVL LSRER+RQI  +AL+KLR++S  DN  +Y
Sbjct: 383  SFEEIGRVLKLSRERIRQINCTALSKLRESSMLDNFKMY 421



 Score =  152 bits (383), Expect(2) = 3e-73
 Identities = 77/140 (55%), Positives = 103/140 (73%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YLT KEEA++S  LKE AR+E  R K+  +T + + +  + A+A GM    L++ ++   
Sbjct: 125 YLTHKEEAKYSWYLKEEARIEILR-KMVEETSEIDLSSKQLAKAAGMSTRRLDKLLINAK 183

Query: 371 QSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +S+ +I   YR LVVS+A +YQGKGLSLQDL+QEGSIGLL GA++F+P KG+KLSTY YW
Sbjct: 184 ESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGLLHGAKKFNPKKGYKLSTYAYW 243

Query: 551 WIKQAIIRAIEQKSRTIRLP 610
           WI+QAI RA+  KSR IRLP
Sbjct: 244 WIRQAISRAVANKSRVIRLP 263


>XP_007219201.1 hypothetical protein PRUPE_ppa017025mg [Prunus persica] ONI20543.1
           hypothetical protein PRUPE_2G021900 [Prunus persica]
          Length = 440

 Score =  166 bits (421), Expect(2) = 1e-72
 Identities = 84/144 (58%), Positives = 113/144 (78%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           +L+ +EEAE  + LKEGARLE+ R ++  + +K EPT  + A+A+GMK  S+++ + +  
Sbjct: 143 HLSPREEAECCLSLKEGARLESERFRV-VEAQKHEPTSKQLAKAMGMKMRSIDKVLCKRR 201

Query: 371 QSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +S+ +I  SYR LVVS+A++YQGKGLS QDL+QEGSIGLLRGAE+FD  + +KLSTYVYW
Sbjct: 202 ESQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHEREWKLSTYVYW 261

Query: 551 WIKQAIIRAIEQKSRTIRLPLVMC 622
           WI+QAIIRAIE KSR IRLP  +C
Sbjct: 262 WIRQAIIRAIENKSRIIRLPGHVC 285



 Score =  137 bits (344), Expect(2) = 1e-72
 Identities = 75/159 (47%), Positives = 102/159 (64%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            G +C M+AKI K   +L  +  R P+++EIA+   ++ S ++L  + +R PISLD+   T
Sbjct: 282  GHVCGMMAKITKAQNSLNQRFQRLPSHDEIAEVIKVNASTVKLVCERSRPPISLDRVA-T 340

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
            + G +TL+EII GP+E  PE M+ RQ MKQ                VL LHFGLNG++P+
Sbjct: 341  VRGSMTLQEIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDREAN-VLRLHFGLNGESPQ 399

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVY 1103
            S +EIGR+L LSRERVRQI G AL+KLR  S  DNL +Y
Sbjct: 400  SFEEIGRLLKLSRERVRQINGIALSKLRQTSILDNLKLY 438


>XP_008806591.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Phoenix
           dactylifera]
          Length = 449

 Score =  157 bits (397), Expect(2) = 1e-72
 Identities = 87/161 (54%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
 Frame = +2

Query: 143 NEYLEKXXXXXXXXXNYLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAE- 319
           + YL +          YLT +EEAEFS  LK+ A LE A  ++    R   P  S  A  
Sbjct: 138 SRYLMEGCSSRSERSRYLTPREEAEFSHYLKQEAMLETAGKQI----RDCSPLDSGCAAI 193

Query: 320 AVGMKRSSLERAILRISQSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGA 499
           +  MKR + ER +L+  + R RITLSY+RLVVSIAT YQGKGL LQDL+QEG IGLLRGA
Sbjct: 194 SASMKRRNSERTLLKARECRERITLSYKRLVVSIATPYQGKGLGLQDLIQEGCIGLLRGA 253

Query: 500 ERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPLVMC 622
            RFD  KG+KLSTY YWWI+QAI++AI  KSR +R+P  +C
Sbjct: 254 RRFDSKKGYKLSTYAYWWIRQAILKAIANKSRMVRMPGNLC 294



 Score =  145 bits (367), Expect(2) = 1e-72
 Identities = 77/149 (51%), Positives = 105/149 (70%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            G++CE + KI ++ + L  +LGR PTY+EIAD AGI VS +R+ S+ +R PIS+DQ  P 
Sbjct: 291  GNLCEAMNKIMESKSLLRRQLGRNPTYDEIADFAGIGVSSVRIISERSRHPISVDQ--PV 348

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
                +TLK+IIPGPDE RPE +V RQ+M QN              +++ LH+GLNG+T +
Sbjct: 349  NKQGLTLKDIIPGPDEIRPEVIVNRQEMLQNMGKLLKILNGREQ-YIIRLHYGLNGETAR 407

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRD 1073
            SCDEIGR+L+LSRER+RQI  SAL +LR+
Sbjct: 408  SCDEIGRLLNLSRERIRQIHCSALRRLRE 436


>XP_006345495.2 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Solanum
            tuberosum]
          Length = 423

 Score =  151 bits (381), Expect(2) = 3e-72
 Identities = 80/159 (50%), Positives = 106/159 (66%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            GS+ E+V KI   NT L+ KL R P+Y+EIA+  G+DVS +RL  + NR PIS+DQ   T
Sbjct: 264  GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQIV-T 322

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              G ++L+ II GP++T PE  V+RQ MKQ+               +L LHFGLNGD P+
Sbjct: 323  SQGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILHNVLCDREAKILKLHFGLNGDNPQ 382

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVY 1103
            S +EIGRVL LSRER+RQI  +AL+KLR++S  DN  +Y
Sbjct: 383  SFEEIGRVLKLSRERIRQINCTALSKLRESSMLDNFKMY 421



 Score =  150 bits (380), Expect(2) = 3e-72
 Identities = 76/140 (54%), Positives = 103/140 (73%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YLT +EEA++S  LKE AR+E  R K+  +T + + +  + A+A GM    L++ ++   
Sbjct: 125 YLTHEEEAKYSWYLKEEARIEILR-KMVEETSEIDLSSKQLAKAAGMSTQRLDKLLINAK 183

Query: 371 QSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +S+ +I   YR LVVS+A +YQGKGLSLQDL+QEGSIGLL GA++F+P KG+KLSTY YW
Sbjct: 184 ESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGLLHGAKKFNPKKGYKLSTYAYW 243

Query: 551 WIKQAIIRAIEQKSRTIRLP 610
           WI+QAI RA+  KSR IRLP
Sbjct: 244 WIRQAISRAVANKSRVIRLP 263


>XP_012065613.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Jatropha curcas] KDP43578.1 hypothetical protein
           JCGZ_16865 [Jatropha curcas]
          Length = 429

 Score =  167 bits (424), Expect(2) = 7e-72
 Identities = 88/166 (53%), Positives = 117/166 (70%)
 Frame = +2

Query: 113 GVNFFEVDARNEYLEKXXXXXXXXXNYLTAKEEAEFSMDLKEGARLEAARNKLWADTRKE 292
           G +F  V+       +          YL+  EE EF + LK+ ARLEAAR ++ A+T++ 
Sbjct: 106 GSDFVAVEEEKNGQNETALFQSSSNGYLSPIEETEFCLCLKDQARLEAARRRI-AETQEH 164

Query: 293 EPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLVVSIATAYQGKGLSLQDLVQE 472
           EPT+ + A+A+ M+R S+ +   +  +SR RIT  Y+RLVVSIA +Y+GKGLSLQDL+QE
Sbjct: 165 EPTLKQLAKALKMRRRSVGKIPCKGRESRRRITYYYKRLVVSIAKSYRGKGLSLQDLIQE 224

Query: 473 GSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLP 610
           GSIGLLRGAERFDP +G KLSTYVYWWI++AII +I  KSR +RLP
Sbjct: 225 GSIGLLRGAERFDPSRGNKLSTYVYWWIREAIITSISNKSRIVRLP 270



 Score =  133 bits (334), Expect(2) = 7e-72
 Identities = 76/159 (47%), Positives = 98/159 (61%)
 Frame = +3

Query: 627  GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASQSNRTPISLDQTPPT 806
            G M E   KIA+   AL  +LGR P+Y+EIA    + +S +R+  +SNR P+SLD+    
Sbjct: 271  GGMREKKKKIAEARIALEKRLGRLPSYDEIAQALNLHISTVRIGFESNRFPVSLDRAMSD 330

Query: 807  LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXXFVLYLHFGLNGDTPK 986
              G +TL+EI+PGPDE  PE MV+RQ +KQ               +VL L FGLNG TP+
Sbjct: 331  -QGGMTLQEILPGPDEMMPEYMVKRQLLKQELDKLLQTLSEREA-YVLRLTFGLNGQTPQ 388

Query: 987  SCDEIGRVLHLSRERVRQIRGSALAKLRDASATDNLGVY 1103
            S +EIG  L L RERVRQI   AL+KLR+ S  +NL VY
Sbjct: 389  SFEEIGGSLKLCRERVRQINSIALSKLRERSILENLEVY 427