BLASTX nr result

ID: Papaver32_contig00014990 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00014990
         (1310 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CBI30264.3 unnamed protein product, partial [Vitis vinifera]           67   2e-08
XP_010654342.1 PREDICTED: transcription initiation factor TFIID ...    67   2e-08
XP_010271709.1 PREDICTED: transcription initiation factor TFIID ...    60   4e-06

>CBI30264.3 unnamed protein product, partial [Vitis vinifera]
          Length = 372

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 45/117 (38%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
 Frame = -1

Query: 1133 TLSQKSHIYQQHPHTYPTVSHXXXXXXXXXXXXXXXXXXQ-EHCSQQFPPTWVQQPAPHP 957
            +L Q+SHI QQH H  PT S                   Q EH  QQFPP+ V Q  PHP
Sbjct: 124  SLPQRSHIPQQHHHPLPTASQQQQMSTAQQPQQPLLSHQQQEHYGQQFPPSRVPQSLPHP 183

Query: 956  ALALRGLASGN-------VTASSTSPLRVEYSTCSADSGETSDQSLSKRSIHKLITQ 807
                R   SGN       +   ST  L     T SA++ E+ ++ LSKRSIH+L+ Q
Sbjct: 184  QQIGRVQGSGNQKPSSLAIVQPSTPQLGPHSRTASAEASESGNRILSKRSIHELVNQ 240


>XP_010654342.1 PREDICTED: transcription initiation factor TFIID subunit 12, partial
            [Vitis vinifera]
          Length = 495

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 45/117 (38%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
 Frame = -1

Query: 1133 TLSQKSHIYQQHPHTYPTVSHXXXXXXXXXXXXXXXXXXQ-EHCSQQFPPTWVQQPAPHP 957
            +L Q+SHI QQH H  PT S                   Q EH  QQFPP+ V Q  PHP
Sbjct: 247  SLPQRSHIPQQHHHPLPTASQQQQMSTAQQPQQPLLSHQQQEHYGQQFPPSRVPQSLPHP 306

Query: 956  ALALRGLASGN-------VTASSTSPLRVEYSTCSADSGETSDQSLSKRSIHKLITQ 807
                R   SGN       +   ST  L     T SA++ E+ ++ LSKRSIH+L+ Q
Sbjct: 307  QQIGRVQGSGNQKPSSLAIVQPSTPQLGPHSRTASAEASESGNRILSKRSIHELVNQ 363


>XP_010271709.1 PREDICTED: transcription initiation factor TFIID subunit 12 isoform
            X1 [Nelumbo nucifera] XP_010271711.1 PREDICTED:
            transcription initiation factor TFIID subunit 12 isoform
            X1 [Nelumbo nucifera]
          Length = 558

 Score = 60.1 bits (144), Expect = 4e-06
 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
 Frame = -1

Query: 1226 TRQSMTPTGPGRPLHXXXXXXXXXXXXXXXPTLSQKSHIYQQHPHTYPTVSHXXXXXXXX 1047
            T+  M+    G+ +H                +L Q+SHI QQH H  PT SH        
Sbjct: 285  TQPWMSGGSQGKQMHPPSLPSSSYRPQMKPQSLQQRSHIPQQH-HPLPTASHQQQIPSPQ 343

Query: 1046 XXXXXXXXXXQE-HCSQQFPPTWVQQPAPHPALALRGLASGNVTASSTS--PLRVEY--- 885
                       + H  QQ+P   V Q A H     RG  SG+  + S +  P  V+    
Sbjct: 344  QQQQPSQPHQSQDHYGQQYPAPRVAQSALHQQQVTRGQGSGSQKSPSLAIMPTTVQSGSH 403

Query: 884  -STCSADSGETSDQSLSKRSIHKLITQ 807
             +T +AD+GE   + LSKR+IH+L+TQ
Sbjct: 404  NTTSNADAGEICSKILSKRTIHELVTQ 430


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