BLASTX nr result
ID: Papaver32_contig00000246
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver32_contig00000246
(4983 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009235040.1 hypothetical chloroplast RF1 (chloroplast) [Papav... 2836 0.0
YP_009310020.1 hypothetical chloroplast RF1 (chloroplast) [Corea... 2056 0.0
YP_001294243.1 hypothetical chloroplast RF1 [Buxus microphylla] ... 1699 0.0
YP_009255665.1 ycf1 protein (chloroplast) [Cornus controversa] A... 1628 0.0
AEX94004.1 hypothetical chloroplast RF19 (chloroplast) [Crinum a... 1503 0.0
ADD30923.1 putative RF1 protein (chloroplast) [Staphylea colchica] 1481 0.0
YP_008577211.1 hypothetical chloroplast RF1 (chloroplast) [Eucal... 1470 0.0
AEX94009.1 hypothetical chloroplast RF19 (chloroplast) [Asparagu... 1470 0.0
YP_008576871.1 hypothetical chloroplast RF1 (chloroplast) [Eucal... 1467 0.0
YP_008576531.1 hypothetical chloroplast RF1 (chloroplast) [Eucal... 1467 0.0
YP_009257773.1 hypothetical chloroplast RF1 (chloroplast) [Acer ... 1466 0.0
YP_008576701.1 hypothetical chloroplast RF1 (chloroplast) [Eucal... 1464 0.0
YP_008576616.1 hypothetical chloroplast RF1 (chloroplast) [Eucal... 1462 0.0
AGC57600.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptu... 1462 0.0
AGC57940.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptu... 1462 0.0
YP_008576446.1 hypothetical chloroplast RF1 (chloroplast) [Eucal... 1461 0.0
YP_008576786.1 hypothetical chloroplast RF1 (chloroplast) [Eucal... 1461 0.0
YP_008577296.1 hypothetical chloroplast RF1 (chloroplast) [Eucal... 1458 0.0
YP_008575681.1 hypothetical chloroplast RF1 (chloroplast) [Eucal... 1456 0.0
YP_009231219.1 hypothetical chloroplast RF1 (chloroplast) [Dipte... 1456 0.0
>YP_009235040.1 hypothetical chloroplast RF1 (chloroplast) [Papaver somniferum]
AMD08758.1 hypothetical chloroplast RF1 (chloroplast)
[Papaver somniferum]
Length = 1784
Score = 2836 bits (7351), Expect = 0.0
Identities = 1434/1651 (86%), Positives = 1452/1651 (87%), Gaps = 11/1651 (0%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR
Sbjct: 134 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 193
Query: 4801 KNNSIRSNKYLVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXXXXXXXX 4622
KNNSIRSNKYLVSELRN MARIFSILLFITCVYYLGR+PSPIVTKKLK
Sbjct: 194 KNNSIRSNKYLVSELRNSMARIFSILLFITCVYYLGRMPSPIVTKKLKEETAETEERGES 253
Query: 4621 XXXXXXEIETISETKGTKQEEGSIEEDPSPSLCSEENSXXXXXXXXXXXXXLWFEKPLVT 4442
EIETISETKGTKQEEGSIEEDPSPSLCSEENS LWFEKPLVT
Sbjct: 254 EGETDVEIETISETKGTKQEEGSIEEDPSPSLCSEENSKLEILKLKEDKDLLWFEKPLVT 313
Query: 4441 LLFDYKRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIK 4262
LLFDYKRWNRPVRYIKND+FEDAVRDEMSH+FFFTCESDGKERISFTYPPSLSIFLEMIK
Sbjct: 314 LLFDYKRWNRPVRYIKNDQFEDAVRDEMSHYFFFTCESDGKERISFTYPPSLSIFLEMIK 373
Query: 4261 GKILLSTTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCN 4082
GKILLSTTEKPSSEELYNNWVYT NAFFNRIDALERGSLKLDVLEKRIR CN
Sbjct: 374 GKILLSTTEKPSSEELYNNWVYTNKKKKTNINNAFFNRIDALERGSLKLDVLEKRIRFCN 433
Query: 4081 DETEQDCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAFSEEGWIWINKFHNILPTNYQ 3902
DETEQDCLPE YDPFLNGTRRGSEKKKKYLNSS NMNEAFSEEGWIWINKFHNILPTNYQ
Sbjct: 434 DETEQDCLPERYDPFLNGTRRGSEKKKKYLNSSLNMNEAFSEEGWIWINKFHNILPTNYQ 493
Query: 3901 XXXXXXXXXXXKYFLPEEGKLNSENRTKYLFDAVTPDRHHQRIIKESIGIKEIRKEVPQW 3722
KYFLPEEGKLNSENRTK+LFDAVTPDRHHQRIIKESIGIKEIRKEVPQW
Sbjct: 494 EFEEKKEKFERKYFLPEEGKLNSENRTKFLFDAVTPDRHHQRIIKESIGIKEIRKEVPQW 553
Query: 3721 SYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXXXXXXXEVEEVFVLRY 3542
SYKLITSL+QQDGTILEETAEDHEIRSRKANHVVIF EVEEVFVLRY
Sbjct: 554 SYKLITSLDQQDGTILEETAEDHEIRSRKANHVVIFTDTERTNSTTNTNDEVEEVFVLRY 613
Query: 3541 SQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRIYKKVFFSADTSRIWNLLFK 3362
+QESDFRRDIIKGSMRAQRRKT IWEPFQTNIHSPLFLDRIYKK FFSADTSRIWNLLFK
Sbjct: 614 AQESDFRRDIIKGSMRAQRRKTGIWEPFQTNIHSPLFLDRIYKKFFFSADTSRIWNLLFK 673
Query: 3361 NWMIKSTEFQNSSFXXXXXXXXXXXXXXXXENDRLAVAESWDTVLFGQSIRGCLLIAHSI 3182
NWMIKSTE +NSSF ENDRLAVAESWDTVLFGQSIRGCLLIAHSI
Sbjct: 674 NWMIKSTELKNSSFEEETKEKDKKRKKKGEENDRLAVAESWDTVLFGQSIRGCLLIAHSI 733
Query: 3181 FRKYIGLPSLIIAKNISRILLFQPPEWNEDWREWGREMHVKCTYNGVQLSEMEFPKNWLT 3002
FRKYIGLPSLIIAKN+SRILLFQPPEWNEDWREWGREMHVKCTYNGVQLSEMEFPKNWLT
Sbjct: 734 FRKYIGLPSLIIAKNVSRILLFQPPEWNEDWREWGREMHVKCTYNGVQLSEMEFPKNWLT 793
Query: 3001 EGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKENSCFLTVWGMETEFPFGSPRRRPSFLK 2822
EGIQIKILYPFYPKPWNSSKKRSHH+NPRGIKENSCFLTVWGMETEFPFGSPRRRPSFLK
Sbjct: 794 EGIQIKILYPFYPKPWNSSKKRSHHKNPRGIKENSCFLTVWGMETEFPFGSPRRRPSFLK 853
Query: 2821 PXXXXXXXXXXXXKTQSFLGLRVLKEKTKGFLKDSKEKESWTHKKDFFQKKRIKELGKVN 2642
P KTQSFLGLRVLKEKTKGFLKDSKEKESWTHKKDFFQKKRIKELGKVN
Sbjct: 854 PIFKDLEKRITKKKTQSFLGLRVLKEKTKGFLKDSKEKESWTHKKDFFQKKRIKELGKVN 913
Query: 2641 PILLVGLRKVY---ENKKMSLKENQIVHESSSRIRSMSWTNYSLTEKKIEDLADRTSTIK 2471
PILLVGLRKVY ENKK+SLKENQIVHESSSRIRSMSWTNYSLTEKK EDLADRTSTIK
Sbjct: 914 PILLVGLRKVYESSENKKISLKENQIVHESSSRIRSMSWTNYSLTEKKTEDLADRTSTIK 973
Query: 2470 NQIEKIINDKKNTFLIPDRNINPNDTSCNDKKLEAPKVFWRIFQRRSARLIRKRHSFLNF 2291
NQIEKIINDKK TFLIPDRNINPNDTSCNDK+LEAPK F RIFQRRSARLIRKRHSFLNF
Sbjct: 974 NQIEKIINDKKKTFLIPDRNINPNDTSCNDKRLEAPKSFLRIFQRRSARLIRKRHSFLNF 1033
Query: 2290 LMEKIYMDTLLYLINIPRINAQFSLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTK 2111
L+EKIYMDTLLYLINIPRINAQFSLDLKKGEIDKKS N IHVISTK
Sbjct: 1034 LIEKIYMDTLLYLINIPRINAQFSLDLKKGEIDKKSYNAEIKKEEVEEKKKKKIHVISTK 1093
Query: 2110 KRALSNINNKNLHPFCAPVDLSQAYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKN 1931
KR LSNI+NKNLH FCAPVDLSQAYVFYK SQTQVINKYHMRSVLQYNGTSFFLKDRIK
Sbjct: 1094 KRELSNISNKNLHHFCAPVDLSQAYVFYKLSQTQVINKYHMRSVLQYNGTSFFLKDRIKK 1153
Query: 1930 FFGAQGILNSESRHKKLSNFETNGWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSH 1751
FFG QGIL SESRHKKLSNFETNGWKNWLNSHYNYQYN SKITSSQLALQKQRNGVNQSH
Sbjct: 1154 FFGTQGILYSESRHKKLSNFETNGWKNWLNSHYNYQYNLSKITSSQLALQKQRNGVNQSH 1213
Query: 1750 TISNKASTKLDSYEKKKLFYYKKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKD 1571
TISNKAS KLDSYE+K +F+YKKQNAYVMDSL KQYGYDLLSQKYINYRE KD
Sbjct: 1214 TISNKASRKLDSYEQKNVFHYKKQNAYVMDSLSSKTKIFKKQYGYDLLSQKYINYREGKD 1273
Query: 1570 SYISLSPLQVKESRKIPYNYNTNKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWR 1391
SYISLSPLQVK SRKIPYNYNTNKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWR
Sbjct: 1274 SYISLSPLQVKGSRKIPYNYNTNKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWR 1333
Query: 1390 IVSFCLRKKIDIEAWANMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQIKPSSG 1211
IVSFCLRKKIDIEAWANMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQIKPSSG
Sbjct: 1334 IVSFCLRKKIDIEAWANMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQIKPSSG 1393
Query: 1210 NFFFFDWMGMNEEILNRPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLLFHFNGNQTT- 1034
FFFDWMGMNEEILNRPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLLFHFNG +TT
Sbjct: 1394 KNFFFDWMGMNEEILNRPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLLFHFNGKKTTS 1453
Query: 1033 -------XXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSR 875
DIGSDLSNQEKEVNEDDSDSYMKKSR
Sbjct: 1454 ENKKLKKKDLELENQNQEEKEESDQEEKEESDQEDIGSDLSNQEKEVNEDDSDSYMKKSR 1513
Query: 874 NPNKWKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQ 695
N NKWKSTTEAELDFFLKRYF+FQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQ
Sbjct: 1514 NQNKWKSTTEAELDFFLKRYFIFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQ 1573
Query: 694 RGEMRXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTN 515
RGEMR LTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTN
Sbjct: 1574 RGEMRLDILLIQKDLNLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTN 1633
Query: 514 RKNQQKENDYKNSFDESIKRHRHERVLEKRDEKKDTFVVPENILAPRCRRELRIQICLNS 335
RKNQQKEN Y NSFDESIKRHRHERVLEKRDEK FVVPENILAPRCRRELRIQICLNS
Sbjct: 1634 RKNQQKENGYNNSFDESIKRHRHERVLEKRDEKNYAFVVPENILAPRCRRELRIQICLNS 1693
Query: 334 EKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLED 155
EKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMK KFFLWPNYRLED
Sbjct: 1694 EKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKWKFFLWPNYRLED 1753
Query: 154 LACMNRYWFDTSNGSRFSMLRIYMYPRFTIN 62
LACMNRYWFDTSNGSRFSM RIYMYPRFTIN
Sbjct: 1754 LACMNRYWFDTSNGSRFSMSRIYMYPRFTIN 1784
>YP_009310020.1 hypothetical chloroplast RF1 (chloroplast) [Coreanomecon
hylomeconoides] ALZ50163.1 hypothetical chloroplast RF1
(chloroplast) [Coreanomecon hylomeconoides]
Length = 1855
Score = 2056 bits (5328), Expect = 0.0
Identities = 1101/1732 (63%), Positives = 1247/1732 (71%), Gaps = 92/1732 (5%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR
Sbjct: 134 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 193
Query: 4801 KNNSIRSNKYLVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXXXXXXXX 4622
+N+SIRSNKYLVSELRN MARIFSILLFITCVY+LGRIPSP VTKKLK
Sbjct: 194 QNHSIRSNKYLVSELRNSMARIFSILLFITCVYHLGRIPSPTVTKKLKETAETEERGESE 253
Query: 4621 XXXXXXEIETISETKGTKQE-EGSIEEDPSPSLCSE------------------------ 4517
IETISETKGTKQE EGS EEDPSPSLCSE
Sbjct: 254 EETDVE-IETISETKGTKQEQEGSTEEDPSPSLCSEEKEDPDKIDETEEIQVNGKEKAKD 312
Query: 4516 --------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDYKRWN 4415
ENS LWFEKPLVTLLFDYKRWN
Sbjct: 313 KFHFHFKETCYKNSPVYENAYLDGNQENSKLEILKLKEDKDLLWFEKPLVTLLFDYKRWN 372
Query: 4414 RPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILLSTTE 4235
RP+RYIKND+F++AVR+EMS +FF+TC+SDGK++ISFTYPPSLS F EM+KGK+LL TTE
Sbjct: 373 RPLRYIKNDRFKNAVRNEMSQYFFYTCQSDGKQKISFTYPPSLSYFFEMLKGKMLLCTTE 432
Query: 4234 KP-SSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQDCL 4058
K SSEELYN+W+YT NA FNRIDALE+GSL LDVLEKR RLCNDETEQ+CL
Sbjct: 433 KLFSSEELYNHWIYTNEKKKKNLNNALFNRIDALEKGSLNLDVLEKRTRLCNDETEQECL 492
Query: 4057 PEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAF--SEEGWIWINKFHNILPTNYQXXXXXX 3884
PE YDPFLNG RG+ KK + +SS NM+++ E IWINKFH+ILPTNYQ
Sbjct: 493 PERYDPFLNGPYRGTIKKW-HSHSSMNMDKSLIIPIEDSIWINKFHSILPTNYQEFEQKK 551
Query: 3883 XXXXXKYFLPEEGKLNSENRTKYLFDAVTPDRHHQRIIKESIGIKEIRKEVPQWSYKLIT 3704
K L E+ K++SEN+TKYLF+AVT D + Q I KES+GI+EIRK+VP+WSYKLI
Sbjct: 552 DTFDGKSLLSEQEKMDSENQTKYLFNAVTTDVNEQTIRKESVGIEEIRKKVPRWSYKLID 611
Query: 3703 SLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXXXXXXXEVEEVFVLRYSQESDF 3524
LEQQ+G EE+AEDHEIRSRKA VVIF + EEV ++RYSQ+SDF
Sbjct: 612 DLEQQEGEGEEESAEDHEIRSRKAKRVVIFTDTEQTNTTTNTSDQAEEVALIRYSQQSDF 671
Query: 3523 RRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRIYKKVFFSADTSRIWNLLFKNWMIKS 3344
RRD+IKGSMRAQRRKTV WE Q N+HSPLFLDRI K +FFS DT R+ NL+FKNWM+KS
Sbjct: 672 RRDLIKGSMRAQRRKTVTWELSQINVHSPLFLDRIDKNLFFSFDTYRMMNLIFKNWMMKS 731
Query: 3343 TEFQ-NSSFXXXXXXXXXXXXXXXXENDRLAVAESWDTVLFGQSIRGCLLIAHSIFRKYI 3167
TEF+ + S EN+R+A+AE+WDT++F Q+IRG +LI HSI RKYI
Sbjct: 732 TEFKISDSEEKEIKERDKQKKEKKEENERIAIAETWDTIIFAQAIRGSMLITHSILRKYI 791
Query: 3166 GLPSLIIAKNISRILLFQPPEWNEDWREWGREMHVKCTYNGVQLSEMEFPKNWLTEGIQI 2987
LPSLIIAKNI R+LLFQ PEW+ED +EW REMH+KCTYNGVQLSE EFPKNWLT+GIQI
Sbjct: 792 VLPSLIIAKNIGRMLLFQFPEWHEDLQEWRREMHIKCTYNGVQLSETEFPKNWLTDGIQI 851
Query: 2986 KILYPFYPKPWNSSKKRSHHRNPRGIKENS---CFLTVWGMETEFPFGSPRRRPSFLKPX 2816
KIL+PF KPW+S K RSHHR+P KE CFLTVWGMETE PFGSPR+RPSF +P
Sbjct: 852 KILFPFCLKPWHSFKLRSHHRDPMKKKEKGEIFCFLTVWGMETELPFGSPRKRPSFFEPI 911
Query: 2815 XXXXXXXXXXXKTQSFLGLRVLKEKTKGFLKDSKEKESWTHKKDFFQKKRIKELGKVNPI 2636
K +SFL LRVLKEKTKGFLK SKEK WT K F KK +KEL KVNPI
Sbjct: 912 SKEFENKIIKIKKKSFLVLRVLKEKTKGFLKVSKEKARWTIKIGLFIKKIMKELVKVNPI 971
Query: 2635 LLVGLR--KVYE-------NKKMSLKENQIVHESSSRIRSMSWTNYSLTEKKIEDLADRT 2483
LL GLR +VYE +++ NQI+HES S IRSM WTNYSLTEKK++DL DRT
Sbjct: 972 LLFGLREVEVYELSEKKNGKNSITIINNQIIHESPSPIRSMDWTNYSLTEKKMKDLVDRT 1031
Query: 2482 STIKNQIEKIINDKKNTFLIPDRNINPNDTSCNDKKLEAPKVFWRIFQRRSARLIRKRHS 2303
STI+NQI+KIINDKK FLIPD N +PN+TSC+DK+L+ PK FW+I +RRSARLIRKRHS
Sbjct: 1032 STIRNQIKKIINDKKKNFLIPDMNTSPNETSCDDKRLKPPKNFWQILKRRSARLIRKRHS 1091
Query: 2302 FLNFLMEKIYMDTLLYLINIPRINAQFSLDLKKGEID--KKSDNDXXXXXXXXXXXXXXI 2129
F+ F +EKIYMD LYLINI RIN Q LDLKK + D K S ND I
Sbjct: 1092 FIQFWIEKIYMDAFLYLINIHRINLQPFLDLKKKKFDKYKYSYND--------ETNENRI 1143
Query: 2128 HVISTKKRALSNINNKNLHPFCAPVDLSQAYVFYKFSQTQVINKYHMRSVLQYNGTSFFL 1949
H+IST K+ LSNI+NKN FC LSQAYVFYK SQTQVINKYH RSVLQY GT FL
Sbjct: 1144 HLISTIKKPLSNISNKNSQKFCGLFSLSQAYVFYKLSQTQVINKYHFRSVLQYPGTFLFL 1203
Query: 1948 KDRIKNFFGAQGILNSESRHKK-----LSNFETNGWKNWLNSHYNYQYNFSKITSSQLAL 1784
KDRIK+FFG QGI +SESRHKK + N E NGWKNWL+SHY+YQY+ S+ T+S+L
Sbjct: 1204 KDRIKDFFGTQGIFHSESRHKKFRNSGMKNSEMNGWKNWLSSHYHYQYDLSQTTASRLVP 1263
Query: 1783 QKQRNGVNQSHTISNKASTKLDSYEKKKLFYYKKQNAYVMDSLXXXXXXXXKQYGYDLLS 1604
QK RN VNQS T+ NKASTKLDSYEK +L +Y+KQN Y MDSL KQY Y+LLS
Sbjct: 1264 QKWRNRVNQSRTVPNKASTKLDSYEKNQLIHYEKQNYYAMDSLPSKKEKLKKQYRYNLLS 1323
Query: 1603 QKYINYREAKD--SYISLSPLQVKESRKIPYN---YNTNKPPIFYMPAGIYMSHYLGEDC 1439
KYINY E KD SYIS S LQV E R+IPYN YN KP FY+P GI +S LGED
Sbjct: 1324 HKYINYEERKDSYSYISGSSLQVNEGREIPYNYKKYNAYKPEFFYVPGGIAISDCLGEDY 1383
Query: 1438 IVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANMDTETRMDKNTKTGINYYSIINQIDTK 1259
I+D D+NPDRKYFDWRI+ FCL KI+I AW N+DT T ++KN KTG NYYSII++ID K
Sbjct: 1384 IIDMDQNPDRKYFDWRIIYFCLTNKINIGAWTNIDTGTNINKNNKTGTNYYSIIDKIDKK 1443
Query: 1258 DLSYLAIDKQIKPSSGNFFFFDWMGMNEEILNRPISNLHLWFFPELLGLYDTYRIKPWII 1079
DLSYLAI KQIKPS+ FDWMGMNEEILN PISNL LWFFPE LGLYD YRIKPWII
Sbjct: 1444 DLSYLAIHKQIKPSNQKKTLFDWMGMNEEILNHPISNLELWFFPEFLGLYDAYRIKPWII 1503
Query: 1078 PTKSLLFHFNGNQTT-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSD 938
P K LLF FNGNQ T D+GSD
Sbjct: 1504 PIKLLLFRFNGNQNTSENKNINGKEKKDLHIPFNEKKDLELENRNQEEKEQSVQEDLGSD 1563
Query: 937 LSNQEKEVNEDDSDSYMKKSRNPNKWKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSI 758
L NQ+KEV ED S KK R + KS TEAELDFFLKRY LFQLRW ++L+QRIIN+I
Sbjct: 1564 LPNQQKEVKEDYGGSDTKKRRKKKQSKSNTEAELDFFLKRYLLFQLRWDNALNQRIINNI 1623
Query: 757 QIYCLLLRLNNPKQIAISSIQRGEMRXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDG 578
++YCLLLRLNNPKQIAISSIQRGEM LTELI +G+LIIEP RLSI+ DG
Sbjct: 1624 KVYCLLLRLNNPKQIAISSIQRGEMSLDVMLIQKDLTLTELIKRGILIIEPTRLSIKWDG 1683
Query: 577 LFIMYQTIVISLVHKSNHQTNRKNQQKENDYKNSFDESIKRHRHERVLEKRDEKKDTFVV 398
FIMYQTI ISLVHKS HQTN K +++ N KN FDESI RHRHER+L RDE F++
Sbjct: 1684 QFIMYQTIAISLVHKSKHQTNLKCRERGNADKNYFDESITRHRHERMLGNRDENHYDFLI 1743
Query: 397 PENILAPRCRRELRIQICLNSEKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLD 218
PEN L+PR RRELRI ICLNSE NV++R K F N+NNI+NCG FL+ESKHLD+DPK LD
Sbjct: 1744 PENFLSPRRRRELRILICLNSENMNVMERNKVFCNENNIRNCGHFLDESKHLDRDPKKLD 1803
Query: 217 RDRNKLMKLKFFLWPNYRLEDLACMNRYWFDTSNGSRFSMLRIYMYPRFTIN 62
D NK +KLKFFLWPNYRLEDLACMNRYWFDTSNGSRFSM RIYMYPR I+
Sbjct: 1804 TDTNKFIKLKFFLWPNYRLEDLACMNRYWFDTSNGSRFSMSRIYMYPRLRIS 1855
>YP_001294243.1 hypothetical chloroplast RF1 [Buxus microphylla] A6MM95.1 RecName:
Full=Protein TIC 214; AltName: Full=Translocon at the
inner envelope membrane of chloroplasts 214;
Short=AtTIC214 ABQ45308.1 hypothetical chloroplast RF1
(chloroplast) [Buxus microphylla]
Length = 1859
Score = 1699 bits (4401), Expect = 0.0
Identities = 941/1746 (53%), Positives = 1145/1746 (65%), Gaps = 107/1746 (6%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR
Sbjct: 134 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 193
Query: 4801 KNNSI------RSNKYLVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+N+SI RSNKYLVSELRN MARIFSILLFITCVYYLGR+P+PIVTKKLK
Sbjct: 194 QNHSIKSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRMPAPIVTKKLKETSKTE 253
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPSPSLCSEE----------------- 4514
IET SETKGTKQE E S EEDPSPSLCSEE
Sbjct: 254 ERGESEEERDVE-IETTSETKGTKQEQERSTEEDPSPSLCSEEKEDPDKIDETEEIRVNG 312
Query: 4513 -----------------------------NSXXXXXXXXXXXXXLWFEKPLVTLLFDYKR 4421
NS WFEKPLVTLLFDYKR
Sbjct: 313 KEKTKDEFKETCYKSRPVYENYYLNGNQENSKLEILKDKEDKDLFWFEKPLVTLLFDYKR 372
Query: 4420 WNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILLST 4241
WNRP+RYIKND+FE+AVR+EMS + F+TC++DGK+RISFTYPPSLS FLEMI+ KI L T
Sbjct: 373 WNRPLRYIKNDRFENAVRNEMSQYLFYTCKNDGKQRISFTYPPSLSTFLEMIQRKIYLCT 432
Query: 4240 TEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQDC 4061
EK SSEE+YN+W+YT N F NRI+AL++ + L+VLEK RLCNDETEQ+C
Sbjct: 433 KEKLSSEEMYNHWIYTNEQKKNNLRNEFINRIEALDKEFVSLNVLEKITRLCNDETEQEC 492
Query: 4060 LPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAFSEEG----WIWINKFHNILPTNYQXXX 3893
P+ YDP LNG RG+ L SS MNE E+ + INK H IL T+Y+
Sbjct: 493 SPKVYDPLLNGPYRGTITN---LYSSSIMNETLIEDSIETLCLCINKIHGILLTDYREFE 549
Query: 3892 XXXXXXXXKYFLPEEGKLNS-------ENRTKYLFDAVTPDRHHQRIIKESIG------I 3752
K + G L++ E+ + F A++ RI E +
Sbjct: 550 HKINKFDRKSLSRDIGHLSTSIIEFDGESIPSFNFKALSLLTEDGRIDSEDQAKFSKFLV 609
Query: 3751 KEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXXXXXXX 3572
KEI K VP+WSYKLI +LEQ++ EE AEDHEIRSRKA VVIF
Sbjct: 610 KEISKRVPRWSYKLIDTLEQEERENEEEVAEDHEIRSRKAKRVVIFNDNGQNTDTHTNTS 669
Query: 3571 EVE---EVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRIYKKVFF 3401
+ EV ++RYSQ+SDFRRDIIKGSMRAQRRK V W+ FQ N+HSPLFLDRI K FF
Sbjct: 670 NDDQGNEVALIRYSQQSDFRRDIIKGSMRAQRRKIVTWKLFQANVHSPLFLDRIDKTFFF 729
Query: 3400 SADTSRIWNLLFKNWMIKSTEFQNSSFXXXXXXXXXXXXXXXXEND---RLAVAESWDTV 3230
S D S + ++F+NWM+K+TE + S + + + R+ +AE+WD++
Sbjct: 730 SFDISGMMKIIFRNWMVKNTELKISDYEEEEKNKKETEKKNEKKREEKTRILIAETWDSI 789
Query: 3229 LFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWREWGREMHVKCTY 3050
L Q IRG +L+ SI RKYI LPSLIIAKNISR+LLFQ PEW+ED ++W RE+HVKCTY
Sbjct: 790 LCAQVIRGSMLVIQSIIRKYIVLPSLIIAKNISRMLLFQFPEWSEDLKDWSREIHVKCTY 849
Query: 3049 NGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNP---RGIKENSCFLTVW 2879
NGVQLSE EFPKNWL +GIQIKIL+PF KPW+ SK SHHR+P + K + CFLTVW
Sbjct: 850 NGVQLSETEFPKNWLIDGIQIKILFPFCLKPWHRSKLGSHHRDPMKNKRKKNDFCFLTVW 909
Query: 2878 GMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKGFLKDSKEKESW 2699
GME E PFGSPR+R SF +P K F+ L++LKE+TK F+K SKEK+ W
Sbjct: 910 GMEAELPFGSPRKRLSFFEPICKELEKKIRKVKKNYFIVLKILKERTKLFIKVSKEKKGW 969
Query: 2698 THKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVHESSSRIRSMSW 2534
K+ F K+ IKEL K+ L GLR+VY+ N+K + NQ++HESS RIRSM W
Sbjct: 970 VIKRVLFIKRIIKELNKI----LFGLREVYDSSENKNRKDYIISNQMIHESSIRIRSMDW 1025
Query: 2533 TNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNINPNDTSCNDKKLEAPKVF 2354
TN LTEKK++DL DRT+TI+ +IE+I DKK TFL + I+PN+ SC++KKLE+PK
Sbjct: 1026 TNSLLTEKKMKDLTDRTNTIRKKIERIKRDKKKTFLTSEIKISPNERSCDNKKLESPKNI 1085
Query: 2353 WRIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRINAQFSLDLKKGEIDKKSDND 2174
W+I +RR+ RLIRK + F+ FL+E+IY+D L Y+INIPRI+ + L+ KK +DK N
Sbjct: 1086 WQILKRRNTRLIRKWNYFIKFLIERIYIDALPYIINIPRIHGRLFLESKKKIMDKSIYNH 1145
Query: 2173 XXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPVDLSQAYVFYKFSQTQVINKY 1994
H IST KR LSN NNKN FC LSQAYVFYK SQTQVINKY
Sbjct: 1146 EKNQEGIDETNKNTTHFISTIKRPLSNNNNKNSKIFCDLSSLSQAYVFYKLSQTQVINKY 1205
Query: 1993 HMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSNFETNGWKNWLNSHYNYQYNF 1814
++RSVLQY+G S F K+RI+ F G +GI NS+S+HK+L NF N WKNWL H YQY+
Sbjct: 1206 NLRSVLQYHGASLFPKERIRYFCGTRGIFNSQSKHKRLRNFGMNEWKNWLRDH--YQYDL 1263
Query: 1813 SKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLFYYKKQNAYVMDSLXXXXXXX 1634
S+I S+L LQK RN VNQ T+ NK S KL SYEK +L +Y+ ++ Y + SL
Sbjct: 1264 SQIKWSRLVLQKWRNRVNQRRTVQNKDSKKLGSYEKDQLIHYETEHDYEVYSLPSQKENL 1323
Query: 1633 XKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIPYNYNTNKPPIFYMPAGIYMSHY 1454
K Y YDLLS YI+Y K SYI +SPLQV + R+IPYNYN +KP FY+ GI +S Y
Sbjct: 1324 KKNYRYDLLSYNYIHYENKKGSYIHVSPLQVTKGREIPYNYNIHKPEFFYVLGGIPISDY 1383
Query: 1453 LGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANMDTETRMDKNTKTGINYYSIIN 1274
LGED I+DT++NPDRKYFDW I++FCLRKK+DIEAW ++DT ++KNTKTG N Y II+
Sbjct: 1384 LGEDYIIDTEENPDRKYFDWIILNFCLRKKLDIEAWTDIDTGDSINKNTKTGTNNYQIID 1443
Query: 1273 QIDTKDLSYLAIDKQIKPSSGNFFFFDWMGMNEEILNRPISNLHLWFFPELLGLYDTYRI 1094
+ID K L YL I ++I PS+ FFDWMGMNEEILNR ISNL LWFF E + LY+ Y+I
Sbjct: 1444 KIDKKYLFYLTIHQEINPSNQKKNFFDWMGMNEEILNRTISNLELWFFQEFVLLYNAYKI 1503
Query: 1093 KPWIIPTKSLLFHFNGNQTT-------------XXXXXXXXXXXXXXXXXXXXXXXXXXX 953
KPW+IP K LL +FN N+
Sbjct: 1504 KPWVIPIKLLLLNFNRNKNVSENKNINKKQKNDLWIPFTEKKSIELENRNQEEKETRGQG 1563
Query: 952 DIGSD----------LSNQEKEVNEDDSDSYMKKSRNPNKWKSTTEAELDFFLKRYFLFQ 803
D+GSD LSNQ+K+V ED + S +KK R + S TEAEL+F LKRY LFQ
Sbjct: 1564 DLGSDAQNHGNLGYVLSNQQKDVEEDYAGSNIKKRRKKKQCTSNTEAELNFLLKRYLLFQ 1623
Query: 802 LRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEMRXXXXXXXXXXXLTELINKG 623
LRW +QR+IN+I++YCLLLRL NPK+I+ISSIQ GEM +TELI KG
Sbjct: 1624 LRWDDPFNQRMINNIKVYCLLLRLINPKEISISSIQSGEM--SPDIIQKDLTITELIKKG 1681
Query: 622 VLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQQKENDYKNSFDESIKRHRHE 443
+LIIEPVRLSI+ DG FIMYQTI ISLVHK+ QTN + ++K KN FDESI RHE
Sbjct: 1682 LLIIEPVRLSIKRDGQFIMYQTISISLVHKNKQQTNGRCREKRYVDKNYFDESIA--RHE 1739
Query: 442 RVLEKRDEKKDTFVVPENILAPRCRRELRIQICLNSEKRNVLDRKKTFYNKNNIKNCGTF 263
+++ DE +VPENI +PR RRELRI+IC NS +N +DR F+N+N +K+CG F
Sbjct: 1740 KMVGTGDENHYELLVPENISSPRRRRELRIRICFNSGNKNFVDRNPVFFNENKVKHCGRF 1799
Query: 262 LEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLACMNRYWFDTSNGSRFSMLRIYM 83
L+E+KHLD D K KL+KLK FLWPNY+LEDLACMNRYWF+T+NGSRFSM RI+M
Sbjct: 1800 LDENKHLDTDKK-------KLIKLKCFLWPNYQLEDLACMNRYWFNTNNGSRFSMSRIHM 1852
Query: 82 YPRFTI 65
YPR I
Sbjct: 1853 YPRLKI 1858
>YP_009255665.1 ycf1 protein (chloroplast) [Cornus controversa] AND96884.1 ycf1
protein (chloroplast) [Cornus controversa]
Length = 1822
Score = 1628 bits (4215), Expect = 0.0
Identities = 907/1706 (53%), Positives = 1119/1706 (65%), Gaps = 67/1706 (3%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGL+L WIR
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLLLVWIR 196
Query: 4801 KNNSIRSN------KYLVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+N+SIRSN KYL SEL N MARIFSILLFITCVYYLGRIPSPI+TKKLK
Sbjct: 197 QNHSIRSNVLIRSNKYLGSELINSMARIFSILLFITCVYYLGRIPSPILTKKLKETSKTE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPSPSLCSEENSXXXXXXXXXXXXXL- 4466
IET SETKGTKQE E S EEDPSPSL SEE
Sbjct: 257 ERRESAEETDVE-IETASETKGTKQEQEESTEEDPSPSLFSEEKEDPDKIDETEEIRVNG 315
Query: 4465 --------WFEKPLVTLLFDYKRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERI 4310
WFEK LV LLFDY RWNRP+RYIKN +FE AVR+EMS +FF+T +SDGK++I
Sbjct: 316 KEKTTDVFWFEKSLVILLFDYNRWNRPLRYIKNRQFEKAVRNEMSQYFFYTSQSDGKQKI 375
Query: 4309 SFTYPPSLSIFLEMIKGKILLSTTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALER 4130
SFTYPPSLS F EMI+ K+ LST EK S++ELYN+W+YT + F NRI+AL+R
Sbjct: 376 SFTYPPSLSTFGEMIQKKMPLSTIEKLSADELYNHWIYTNDEKTKNLSSEFINRIEALDR 435
Query: 4129 GSLKLDVLEKRIRLCNDETEQDCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAFSEEG 3950
GSL LD+LEK+ RLCNDET+++ LP+ YDPFLNG+ RG KK + S N +
Sbjct: 436 GSLSLDILEKKTRLCNDETKKEYLPKMYDPFLNGSSRGI-IKKGFSPSIINETSIENFIE 494
Query: 3949 WIWINKFHNIL--PTNYQXXXXXXXXXXXKYFLPEEGKLNSENRTKYLFDAVTPDRHHQR 3776
IWINK H IL T+Y+ K L + ++N K+LF+A+ D + ++
Sbjct: 495 TIWINKIHGILFTDTDYREFEQKIDTFDKKP-LSTDRRINGAKFLKFLFNAIINDPNDKK 553
Query: 3775 IIKESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHE-IRSRKANHVVIF-XXXX 3602
+ K+SI I+EI K+VP+WSYKLI LEQQ +E H+ +R+RKA VVIF
Sbjct: 554 MRKKSIEIQEISKKVPRWSYKLINDLEQQQERENQEDGAVHQRMRARKAKRVVIFTNNQQ 613
Query: 3601 XXXXXXXXXXEVEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDR 3422
+ +EV ++RYSQ+SDFRR+IIKGSMRAQRRK VIWE FQ N+HSP+FLDR
Sbjct: 614 DVDTDINNSNQKDEVALIRYSQQSDFRRNIIKGSMRAQRRKIVIWELFQANVHSPIFLDR 673
Query: 3421 IYKKVFFSADTSRIWNLLFKNWMIKSTEFQNSSFXXXXXXXXXXXXXXXXEND------R 3260
I K + FS D SR+ L+FKNWM K EF+ + + + R
Sbjct: 674 IDKSLLFSFDISRLMKLIFKNWMGKKEEFKILDYKEEQIKEGEKKEKDKKDENKRKEKTR 733
Query: 3259 LAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWREW 3080
+ +AE+WD + Q +RG LL+ +IFRKYI PSLIIAKNISRILL Q PEW+ED++EW
Sbjct: 734 IEIAEAWDNIPLAQVLRGFLLVTQAIFRKYILFPSLIIAKNISRILLLQLPEWSEDFKEW 793
Query: 3079 GREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRN------- 2921
REMHVKCTYNGVQLSE EFPKNWL +GIQIKIL+PF KPW+ SK RS H++
Sbjct: 794 TREMHVKCTYNGVQLSETEFPKNWLLDGIQIKILFPFCLKPWHKSKLRSSHKDRMKKKGK 853
Query: 2920 PRGIKENSCFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEK 2741
+ KE+ CFLTVWGMET+ PFGSPR+RPSF +P K + F+ +RVLKE+
Sbjct: 854 EQKQKEDFCFLTVWGMETDLPFGSPRKRPSFFEPIFKELEKKIGQLKKKYFIVIRVLKER 913
Query: 2740 TKGFLKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQ 2576
T FL+ E + W K F K+ IKEL K+NPILL LR+V E +K S+ N+
Sbjct: 914 TTFFLRVLNETKKWVIKSILFIKRIIKELSKINPILLFRLREVDELSETKKEKDSIINNR 973
Query: 2575 IVHESSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNINPND 2396
+ ES S+IRS +WTNYSLTEKK++DL DRTSTI+NQIE+I +KK I+PN
Sbjct: 974 TIRESFSQIRSTNWTNYSLTEKKMKDLTDRTSTIRNQIERITKEKKKA-----TPISPNK 1028
Query: 2395 TSCNDKKLEAPKVFWRIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRINAQFSL 2216
TS N K+LE+PK W++ +RR+ RLIRK H FL F +EKIY+D +Y+INIPRI Q L
Sbjct: 1029 TSYNVKRLESPKTIWQMLKRRNVRLIRKLHYFLKFFIEKIYIDIFVYIINIPRIKTQLFL 1088
Query: 2215 DLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNI--NNKNLHPFCAPVDLSQ 2042
+ IDK N+ IH IST K++L NI +NK FC +SQ
Sbjct: 1089 ESTNKIIDKYFYNNERNQERIAKRNKNTIHSISTIKKSLYNISDDNKKSQIFCDLSSVSQ 1148
Query: 2041 AYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSNFETN 1862
AYVFYK SQTQVIN Y +R VLQY+GTSFFLK IK++FG QGI +SE HKKL N N
Sbjct: 1149 AYVFYKLSQTQVINLYKLRLVLQYHGTSFFLKTAIKDYFGTQGIFHSELSHKKLRNSGIN 1208
Query: 1861 GWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLFYYKK 1682
WKNWL H YQY+ S+I S+L QK RN VNQ T K K DSYEK +L +YKK
Sbjct: 1209 QWKNWLRGH--YQYDLSQIKWSRLIPQKWRNRVNQHRTAQTKDLNKWDSYEKDQLIHYKK 1266
Query: 1681 QNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIPYNYNTN 1502
QN Y + SL K Y YDLLS K +NY ++SYI SP QV ++++I YNYNT+
Sbjct: 1267 QNDYEVYSLPNKKENFQKYYRYDLLSYKSLNYENKRNSYIYGSPFQVTKNQEISYNYNTH 1326
Query: 1501 KPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANMDTETR 1322
K +F MP +++YLGE I+ KNPDRKYFDW+I++FCLRKK+DIEAW +DT +
Sbjct: 1327 KHKLFDMPEITTINNYLGEGDIMYMGKNPDRKYFDWKILNFCLRKKVDIEAWIEIDTNS- 1385
Query: 1321 MDKNTKTGINYYSIINQIDTKDLSYLAI--DKQIKPSSGNFFFFDWMGMNEEILNRPISN 1148
+KNTKTG N Y II +ID K L YL I D++ P + N FDWMGMNEEILNRPISN
Sbjct: 1386 -NKNTKTGTNNYKIIQKIDNKGLFYLPIHQDQESNPPNQNKIVFDWMGMNEEILNRPISN 1444
Query: 1147 LHLWFFPELLGLYDTYRIKPWIIPTKSLLFHFNGNQT---------------TXXXXXXX 1013
L WFFPE L LY+ Y+I+PW+IP+K LL + N N+
Sbjct: 1445 LEFWFFPEFLLLYNIYKIQPWVIPSKLLLLNLNLNENFSKNKNINGKQQRNLFIPSNKKQ 1504
Query: 1012 XXXXXXXXXXXXXXXXXXXXDIGSDLS----------NQEKEVNEDDSDSYMKKSRNPNK 863
D+GSD+ NQ+K++ ED S MKK +N +
Sbjct: 1505 SFELKNRNQAEKEKEPAGQGDLGSDVQNQAYVGSLFLNQQKDIEEDYPGSDMKKRKNKKQ 1564
Query: 862 WKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEM 683
+KS TEAEL FFL +Y LFQLRW+ +L+QR+IN++++YCLLLRL NPK+IAISSIQR EM
Sbjct: 1565 YKSNTEAELHFFLNKYLLFQLRWNDTLNQRMINNVKVYCLLLRLRNPKEIAISSIQRREM 1624
Query: 682 RXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQ 503
LTEL+ G+LIIEPVRL ++ DG FIMYQT+ ISLVHKS H N++ +
Sbjct: 1625 GLDIMLIQKNLTLTELMKTGILIIEPVRLFVKNDGQFIMYQTLGISLVHKSKHTPNQRYR 1684
Query: 502 QKENDYKNSFDESIKRHRHERVLEKRDEKKDTFVVPENILAPRCRRELRIQICLNSEKRN 323
+KE K +FDESI +++++ RD+ +VPENIL+ R RRELRI IC ++KRN
Sbjct: 1685 EKEYLDKKTFDESIP--KNQKITGTRDKNHYDLLVPENILSSRRRRELRILICFTAKKRN 1742
Query: 322 VLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLACM 143
+DR F N NN+K+ G FL+E+ H LDR++ KL+KLKFFLWPNYRLEDLACM
Sbjct: 1743 GMDRNPVFCNGNNVKDWGQFLDENPH-------LDREKKKLIKLKFFLWPNYRLEDLACM 1795
Query: 142 NRYWFDTSNGSRFSMLRIYMYPRFTI 65
NRYWFDT+NGSRFSMLRI+MYPR I
Sbjct: 1796 NRYWFDTNNGSRFSMLRIHMYPRLKI 1821
>AEX94004.1 hypothetical chloroplast RF19 (chloroplast) [Crinum asiaticum]
Length = 1782
Score = 1503 bits (3892), Expect = 0.0
Identities = 872/1703 (51%), Positives = 1068/1703 (62%), Gaps = 64/1703 (3%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR
Sbjct: 134 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 193
Query: 4801 KNNSIRSNKYLVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXXXXXXXX 4622
+N+SIRSNKYLVSELRN MARIFSILLFITCVYYLGR+PSPIVTKKLK
Sbjct: 194 QNHSIRSNKYLVSELRNSMARIFSILLFITCVYYLGRMPSPIVTKKLK---ETSETEERG 250
Query: 4621 XXXXXXEIETISETKGTKQE-EGSIEEDPSPSLCSEEN--------SXXXXXXXXXXXXX 4469
++ET ETK TKQE EGS E+D + +
Sbjct: 251 ERKEESDVETTYETKKTKQEQEGSTEQDKDSPVYEDSYLDTHQDNWVLGKLKEEKNEKTY 310
Query: 4468 LWFEKPLVTLLFDYKRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPS 4289
WFEKP+VT LFDYKRWNRP+RYIKND+FE+AVR+EMS +FF+ C SDGK+ ISFTYPPS
Sbjct: 311 FWFEKPIVTFLFDYKRWNRPLRYIKNDRFENAVRNEMSQYFFYICSSDGKQIISFTYPPS 370
Query: 4288 LSIFLEMIKGKILLSTTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDAL----ERGSL 4121
LS F EMI+ KI L TTEK S E+LYN WVYT N +RI L E+GSL
Sbjct: 371 LSTFSEMIERKISLYTTEKLSHEDLYNYWVYTNKQKKYNLNNELISRIKILELEKEKGSL 430
Query: 4120 KLDVLEKRIRLCNDETEQDCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAFSEE-GWI 3944
LD++EKR RLC+DE EQ+ LP+ YDPFLNG RG+ KK N+ + +
Sbjct: 431 ALDMIEKRTRLCDDENEQEYLPKMYDPFLNGPHRGTIKKSDLRAIVNNLITSTKDSVEMF 490
Query: 3943 WINKFHNILPTNYQ--XXXXXXXXXXXKYFLPEEGKLNSENRT---KYLFDAVTPDRHHQ 3779
WINK H + + + + L ++SE++ K+LFD +T D +
Sbjct: 491 WINKIHGLFHKDSREFEHQKKRVSFGEELLLKRAQGIDSESQAKSLKFLFDVITTDPNDL 550
Query: 3778 RII-KESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXX 3602
I K+SIG++EI K V +WSYKL L++++ EE+AED EIRSRK VVI+
Sbjct: 551 TTIRKKSIGMEEISKRVSRWSYKLTDDLKEEEEEDEEESAEDPEIRSRKGKRVVIYTDND 610
Query: 3601 XXXXXXXXXXEV---------EEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTN 3449
EEV ++RYSQ+SDFRR IIKGSMRAQRRKTV WE FQ N
Sbjct: 611 QSTNSRASNNTTSNTSTNDEEEEVALIRYSQQSDFRRGIIKGSMRAQRRKTVTWEMFQAN 670
Query: 3448 IHSPLFLDRIYKKVFFS-ADTSRIWNLLFKNWMIKSTEFQNSSF-XXXXXXXXXXXXXXX 3275
+HSPLFLDRI K FFS D S NL+F+NW+ ++ E Q S F
Sbjct: 671 VHSPLFLDRIDKTFFFSFFDISETINLIFRNWVGENPELQISYFEEEETREKEKTNEEKE 730
Query: 3274 XENDRLAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNE 3095
EN+R+A++E+WDT +F Q+IRG +LI S RKY+ LP LIIAKNI R+LLFQ PEW E
Sbjct: 731 EENERIAISEAWDTFIFTQAIRGLMLITQSFLRKYVILPLLIIAKNIGRMLLFQFPEWYE 790
Query: 3094 DWREWGREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRN-- 2921
D +EW REMHVKCTYNGVQLSE EFP+NWLT+GIQIKIL+PF KPW S+ RSHHR+
Sbjct: 791 DLKEWNREMHVKCTYNGVQLSETEFPQNWLTDGIQIKILFPFRLKPWRRSEVRSHHRDQQ 850
Query: 2920 --PRGIKENSCFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLK 2747
+ K+N CFLTVWG ETE PFGSPR+RPSF +P K + F +RV K
Sbjct: 851 MTKKEKKDNFCFLTVWGRETELPFGSPRKRPSFFEPIFKELEKKMRKVKKKIFQVIRVFK 910
Query: 2746 EKTKGFLKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLR-----KVY---ENKKMS 2591
E+ K FLK SKEK K +K L K+NP+ L+ L KVY EN+K S
Sbjct: 911 ERRKWFLKVSKEKTRRVIKIVLVINLIMKGLEKINPLFLLNLLKLREVKVYESNENRKDS 970
Query: 2590 LKENQIVHESSSRIRSMSWT--NYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPD 2417
N+I+ ES+ RIRSM+ NYSL E K++DLA++T+TI+ QIE I DKK L
Sbjct: 971 NINNKIIRESTIRIRSMNGVNENYSLIETKMKDLANKTTTIRTQIEGITKDKKKRVL--- 1027
Query: 2416 RNINPNDTSCNDKKLEAPKVFWRIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPR 2237
+C+DK+ E+ K FW+IF+R++ RLIRK H F+ +EKIY D LL +I IPR
Sbjct: 1028 --------TCDDKRSESQKDFWQIFKRKNIRLIRKSHYFMKSFIEKIYTDILLCIIKIPR 1079
Query: 2236 INAQFSLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAP 2057
INAQ + K I K ND ++ IST K++ SN N C
Sbjct: 1080 INAQLFFESTKKIIKKSIYNDETNQEGIENTNQNTMNFISTIKKSFSNTNIN-----CDL 1134
Query: 2056 VDLSQAYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLS 1877
LSQAYVFYK SQ Q++NKYH+RSVLQY+GT FL+D IKN+ +GI +S+ RHKK+
Sbjct: 1135 SSLSQAYVFYKLSQDQLLNKYHLRSVLQYHGTYPFLRDIIKNYCTTRGIFDSKQRHKKIH 1194
Query: 1876 NFETNGWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKK- 1700
+ N WK WL H YQYN S+ S L +K RN VNQ TI K STKLD Y+K+K
Sbjct: 1195 KYGINKWKFWLRGH--YQYNLSQTKWSHLVPKKWRNRVNQCRTIQKKNSTKLDLYKKEKD 1252
Query: 1699 -LFYYKKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKI 1523
L +Y KQN Y +DSL K YGYDLLS KYINYR++KDSY+ S LQV E +KI
Sbjct: 1253 QLIHYTKQNYYAVDSLMSQKAKLKKHYGYDLLSYKYINYRDSKDSYVYGSTLQV-EDKKI 1311
Query: 1522 PYNYNTNKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWA 1343
PYN+NT KP FY I +S +L + +DT KN DRK+FDWRI+ FC+R IDIE W
Sbjct: 1312 PYNFNTPKPESFYGLISIAISDFLEKGSTIDTYKNMDRKFFDWRILHFCIRNHIDIETWT 1371
Query: 1342 NMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQIKPSSGNFFFFDWMGMNEEILN 1163
N +T++ KN KT + + + K+ FFDWMGMN+E L
Sbjct: 1372 NTHIDTKIHKNAKTKNS-----QKFEKKN------------------FFDWMGMNQERLY 1408
Query: 1162 RPI--SNLHLWFFPELLGLYDTYRIKPWIIPTKSLLFHFNGN-----------QTTXXXX 1022
R I SNL WFFPE + L+D Y+IKPWIIP K L+FHF N +
Sbjct: 1409 RTISKSNLEPWFFPEFVPLFDAYKIKPWIIPIKLLIFHFCENISQSEKINVNKKKNLPIL 1468
Query: 1021 XXXXXXXXXXXXXXXXXXXXXXXDIGSDL--SNQEKEVNEDDSDSYMKKSRNPNKWKSTT 848
D+ SDL N++K+V ED + + +KKSR + KS
Sbjct: 1469 ANKKAYLELENSNKKKNEQQGQGDLVSDLQKQNKKKDVKEDYTGADIKKSRKKKQSKSKK 1528
Query: 847 EAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEMRXXXX 668
EAEL+FFLK+YFLFQLRW++ L+QR+IN+I++YCLLLRL +PK+IAISSIQRGEM
Sbjct: 1529 EAELNFFLKKYFLFQLRWNAPLNQRMINNIKVYCLLLRLIDPKEIAISSIQRGEMHLDVM 1588
Query: 667 XXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQQKEND 488
LTELI +G+ IIEP+RLS++ D +I+YQT+ ISLV K+ HQTN K K N
Sbjct: 1589 LIQKDLTLTELIKRGIFIIEPIRLSMKRDRKYIIYQTVGISLVDKNKHQTNEKCIIK-NV 1647
Query: 487 Y--KNSFDESIKRHRHERVLEKRDEKKDTFVVPENILAPRCRRELRIQICLNSEKRNVLD 314
Y K +FD S+ +L R++ F+VPENIL+PR RRELRI IC NS NV+D
Sbjct: 1648 YVDKQNFDGSVA--EDSNMLMNRNKNHYDFLVPENILSPRRRRELRILICFNSGNWNVVD 1705
Query: 313 RKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLACMNRY 134
R F N+NNIKNCG FL E KH L+ D NK +K K FLWPNYRLEDLACMNRY
Sbjct: 1706 RNSIFCNQNNIKNCGQFLNEEKH-------LNTDANKFIKFKLFLWPNYRLEDLACMNRY 1758
Query: 133 WFDTSNGSRFSMLRIYMYPRFTI 65
WFDT+NG FSM RI+MYPRF I
Sbjct: 1759 WFDTNNGGHFSMSRIHMYPRFRI 1781
>ADD30923.1 putative RF1 protein (chloroplast) [Staphylea colchica]
Length = 1824
Score = 1481 bits (3834), Expect = 0.0
Identities = 880/1727 (50%), Positives = 1079/1727 (62%), Gaps = 91/1727 (5%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNI MFRCNNKMLFVTSSFVGWLIGHI FMKW+ LVL WI+
Sbjct: 137 LIFQLFNHFILPSSILARLVNISMFRCNNKMLFVTSSFVGWLIGHIFFMKWIRLVLVWIQ 196
Query: 4801 KNNSIRSN------KYLVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSN KYLVSELRN MARIFSILLFITCVYYLGRIPSPI+TKKLK
Sbjct: 197 QNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPILTKKLKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPSPSLCSEENSXXXXXXXXXXXXXLW 4463
IET SET+GTKQE EGS EEDPSP L ++ W
Sbjct: 257 ERGESEEETDIE-IETTSETRGTKQEQEGSTEEDPSPYLDKDKEDKYKDKEDKYLL---W 312
Query: 4462 FEKPLVTLLFDYKRWNRPVRYIKNDKFEDAVRDEMSHFFFFTC--ESDGKERISFTYPPS 4289
FEKP+V LL DYKRWNRP+RYIKN++FE+ VR+E+S +FF+ S GKERISFTYPPS
Sbjct: 313 FEKPVVILLLDYKRWNRPLRYIKNNRFENTVRNEVSQYFFYPYLYRSAGKERISFTYPPS 372
Query: 4288 LSIFLEMIKGKILLSTTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDV 4109
LS FLEMI+ K+ L T K S +ELYNNWVYT N F NRI+ L+ S+ LDV
Sbjct: 373 LSTFLEMIQKKMSLFT--KISFDELYNNWVYTNKQKKSNLSNEFINRIETLDNRSIVLDV 430
Query: 4108 LEKRIRLCNDETEQDCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAFSEEGWIWINKF 3929
LEK RLCND+T+++ L + YDP G RG + KK L S N + +WINK
Sbjct: 431 LEKMTRLCNDDTKKEYLAKIYDP---GPYRG-QIKKWLLPSIINETSVKNNIEVLWINKI 486
Query: 3928 HNILPTN-----------YQXXXXXXXXXXXKYFLPEEGKLNSENRT--------KYLFD 3806
H IL T + + E+ ++ SE+R K FD
Sbjct: 487 HGILLTTDYHKFESKIDTFDRKSLSIEKRLDLFPEHEQRRIGSEDRIRDDQIKILKIFFD 546
Query: 3805 AVTPDR---HHQRII---KESIG--IKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHE 3650
AV D + Q I K+SIG IKEI K+VP+WSYKLI LEQQ+ E+ AEDHE
Sbjct: 547 AVITDTTVPNDQTINNKKKQSIGSGIKEISKKVPKWSYKLIDELEQQERDNEEKVAEDHE 606
Query: 3649 IRSRKANHVVIFXXXXXXXXXXXXXXEV--------EEVFVLRYSQESDFRRDIIKGSMR 3494
IRSRKA VVIF + +EV ++RYSQ+SDFRRD IKGS+R
Sbjct: 607 IRSRKAKRVVIFTDKQQNIDTYTNTQDTNNPDQDQADEVALIRYSQQSDFRRDTIKGSVR 666
Query: 3493 AQRRKTVIWEPFQTNIHSPLFLDRIYKKVFFSADTSRIWNLLFKNWMIKSTEFQNSSFXX 3314
AQRRKTVIWE FQ N+HSPLFLDR+ K FF R +F+NW+ K+TEF+ S +
Sbjct: 667 AQRRKTVIWELFQANVHSPLFLDRLEKSFFFPF---RPMKFIFRNWIGKNTEFKTSDYTK 723
Query: 3313 XXXXXXXXXXXXXXEN------DRLAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSL 3152
E R+ +AE+WD ++F Q IRG +L+ SI RKY+ LPSL
Sbjct: 724 GKAKEIEKKEKAKREKYRREEKARIEIAEAWDIIIFAQVIRGSVLVTQSILRKYVILPSL 783
Query: 3151 IIAKNISRILLFQPPEWNEDWREWGREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYP 2972
IIAKNI+R+LLFQ PEW+ED + W REMHVKCTYNGVQLSE EFP+NWLT+GIQIKIL+P
Sbjct: 784 IIAKNIARMLLFQFPEWSEDLKYWNREMHVKCTYNGVQLSETEFPQNWLTDGIQIKILFP 843
Query: 2971 FYPKPWNSSKKRSHHRNP---RGIKENSCFLTVWGMETEFPFGSPRRRPSFLKPXXXXXX 2801
F KPW+ SK R ++P +G K + CFLTVWGMETE PFGSPR R SF +P
Sbjct: 844 FCLKPWHRSKLRFPDKDPIKKKGQKNDFCFLTVWGMETELPFGSPRNRRSFFEPIFKELK 903
Query: 2800 XXXXXXKTQSFLGLRVLKEKTKGFLKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGL 2621
KT FL +RVLKE+TK FLK SKE + W K F K IKEL K NPILL+ L
Sbjct: 904 KKIRKVKTLRFLVIRVLKERTKIFLKVSKETQKWVIKSILFIKGIIKELSKRNPILLLRL 963
Query: 2620 RKVYE-----NKKMSL--KENQIVHESSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQI 2462
+++YE +K S+ N+++HESS +IR+M+ TNYSLTEKK+ DL D+T TI N+I
Sbjct: 964 KEIYELSETKKEKDSIIRNSNRMIHESSIQIRAMNLTNYSLTEKKMIDLTDKTITINNKI 1023
Query: 2461 EKIINDKKNTFLIP--DRNINPNDTSCNDKKLEAP--KVFWRIFQRRSARLIRKRHSFLN 2294
+KI DKK FLIP ++ I+ N TS + K +E+P K W+I +RR+ARLIRK + F
Sbjct: 1024 KKISKDKKKRFLIPEKEKKISSNKTSYHAKLVESPKNKNIWQILKRRNARLIRKSYHFFK 1083
Query: 2293 FLMEKIYMDTLLYLINIPRINAQFSLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVIST 2114
FL+E+IY++ L ++N PRI+AQ + K +DK N+ IH IST
Sbjct: 1084 FLIERIYLNILFSMMNSPRIHAQHFFESTKKNVDKYIYNNETNQERINKTNKNTIHFIST 1143
Query: 2113 KKR--ALSNINNKNLHPFCAPVDLSQAYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDR 1940
K ++SN +N N FC LSQAYVFYK SQTQVIN Y +RSVL+Y GTS LK+
Sbjct: 1144 IKNPLSISNSSNNNSQTFCDLYSLSQAYVFYKLSQTQVINLYKLRSVLKYYGTSLCLKNE 1203
Query: 1939 IKNFFGAQGILNSESRHKKLSNFETNGWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVN 1760
IK+ FG QGI S+ R++ L +E N WK WL H YQY+ S+I S+L QK RN V+
Sbjct: 1204 IKDDFGEQGIFRSKLRYRNLQTYEMNQWKPWLKGH--YQYDLSQIRWSRLVPQKWRNRVS 1261
Query: 1759 QSHTISNKASTKLDSYEKKKLFYYKKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYRE 1580
NK K DSYEK +L +Y+KQN + DSL K Y Y+ LS K+INY +
Sbjct: 1262 CIAQNKNKDLKKWDSYEKNQLIHYEKQNDFETDSLLNQKSNFKKHYRYNRLSYKFINYED 1321
Query: 1579 AKDSYISL--SPLQVKESRKIPYNYNTN--KPPIFYMPAGIYMSHYLGEDCIVDTDKNPD 1412
+ SY PLQ+ +KI YNYN N K IF M GI +++YLGED I+D +K PD
Sbjct: 1322 KRGSYTYSYGLPLQLNNKQKILYNYNINIHKQKIFDMLRGIPINNYLGEDDIMDMEKIPD 1381
Query: 1411 RKYFDWRIVSFCLRKKIDIEAWANMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAI-- 1238
RKY IE+W N T+T +K KTG Y II +ID K L L I
Sbjct: 1382 RKY---------------IESWIN--TDTNSNKKIKTGTQNYQIIEKIDKKGLFSLTIHQ 1424
Query: 1237 DKQIKPSSGNFFFFDWMGMNEEILNRPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLLF 1058
D++I PS+ FFDWMGMNEEILNR ISNL LWFFPE + LY Y+I PWIIP K LF
Sbjct: 1425 DQEINPSNQKRLFFDWMGMNEEILNRSISNLELWFFPEFVRLYSAYKIIPWIIPIKFFLF 1484
Query: 1057 HFN--------GNQT-TXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSD----------L 935
+F+ G Q +IGSD L
Sbjct: 1485 NFHEKVDKNIIGKQKGDLSISSNEKKSLELENQNKEEKELEGQRNIGSDSQNQGNLRAVL 1544
Query: 934 SNQEKEVNEDDSDSYMKKSRNPNKWKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQ 755
SNQEK V++D + S MKK R ++KS TEAELDFFLKRY FQLRW+ SLDQR+IN+I+
Sbjct: 1545 SNQEKNVDDDYAGSDMKKHRKKKQYKSNTEAELDFFLKRYLCFQLRWNDSLDQRMINNIK 1604
Query: 754 IYCLLLRLNNPKQIAISSIQRGEMRXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGL 575
IYCLLL L NP++IAISSIQRGEM LTEL+ +G+LIIEP+RLS++ DG
Sbjct: 1605 IYCLLLSLINPREIAISSIQRGEMSLDILMIQKDFTLTELMKRGILIIEPLRLSVKNDGQ 1664
Query: 574 FIMYQTIVISLVHKSNHQTNRKNQQKENDYKNSFDESIKRHRHERVLEKRDEKKDTFVVP 395
FIMYQT+ ISL+HKS H+ N++ Q+K K +F+ESI +R+ RD+ +V
Sbjct: 1665 FIMYQTVGISLLHKSKHKMNQRYQEKGYVDKKNFNESIA--TRQRMTGTRDKNHYDLLVT 1722
Query: 394 ENILAPRCRRELRIQICLNSEKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDR 215
EN+L R RELR I +NS RN + R F NNIKNCG L++SKH L+
Sbjct: 1723 ENVLPLRRLRELRTLIFINSRNRNGMHRNPVFC--NNIKNCGQVLDKSKH-------LNI 1773
Query: 214 DRNKLMKLKFFLWPNYRLEDLACMNRYWFDTSNGSRFSMLRIYMYPR 74
D+NKLMK KFF WPNYRLEDLACMNRYWF+++NG RFSM+RI+MYPR
Sbjct: 1774 DKNKLMKFKFFFWPNYRLEDLACMNRYWFNSNNGGRFSMIRIHMYPR 1820
>YP_008577211.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus diversicolor]
AGC58620.1 hypothetical chloroplast RF1 (chloroplast)
[Eucalyptus diversicolor]
Length = 1869
Score = 1470 bits (3805), Expect = 0.0
Identities = 872/1759 (49%), Positives = 1069/1759 (60%), Gaps = 120/1759 (6%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVTKK K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPS--------PSLCSE---------- 4517
IET ETKGTKQE EGS EEDPS P E
Sbjct: 257 ERGEGEEETDVE-IETTFETKGTKQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS LWFEKPLVTLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRNKNKENSKFEIFKLKEDPFFLWFEKPLVTLLFDY 375
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN+ FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS FLEMI+ KI L
Sbjct: 376 KRWNRPLRYIKNNHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTFLEMIERKISL 435
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK S+ELY++W+YT F NR++ L +GS+ LDV EKR RLCNDE ++
Sbjct: 436 LTREKLPSDELYDHWIYTNDQKKNYLSKKFRNRMETLNKGSITLDVFEKRTRLCNDENKK 495
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEA----FSEEGWIWINKFHNILPTNYQX 3899
+ LP+ YDPFLNG RG + K+ SS +N+ + E GWI NK H+IL T Q
Sbjct: 496 EYLPKIYDPFLNGPCRG---RVKFFFSSQILNKMSIKNYIETGWI--NKIHSILFTTDQE 550
Query: 3898 XXXXXXXXXXKYFLP-------------EEGKLNSENRTKYL---FDAVTPDRHHQRIIK 3767
K L E+G++ SE++ K L F+AV + +RI K
Sbjct: 551 KFEEKIDTFDKNSLSTEKKLSLFPFPETEQGRILSEDQIKILKIFFNAVITEPKTKRIKK 610
Query: 3766 ESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXX 3587
+SIGIKEI K+V WSYKLI LEQQ+G E AEDH+IRSRK HV+IF
Sbjct: 611 KSIGIKEISKKVSSWSYKLINDLEQQEGENEEIVAEDHQIRSRKTKHVLIFTDNDQNTDA 670
Query: 3586 XXXXXE----VEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRI 3419
+EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 671 NSKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRI 730
Query: 3418 YKKVFFSADTSRIWNLLFKNWMIKSTEFQNSSFXXXXXXXXXXXXXXXXENDRLAVAESW 3239
K +F S D S + L+ K WM K T + + E R+ +A++W
Sbjct: 731 GKPLF-SFDISGMIKLILKKWMYKKTTEEKKNENEKKKEEEKREEYKRQEKARIEIAQTW 789
Query: 3238 DTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWREWGREMHVK 3059
D VLF Q+IRG LL+ S RKYI PS+IIAKNI+RILLFQ PEW+ED ++W REMHVK
Sbjct: 790 DRVLFAQAIRGSLLVTQSFLRKYILFPSVIIAKNIARILLFQFPEWSEDLKDWNREMHVK 849
Query: 3058 CTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKENS---CFL 2888
CTYNGVQLSE EFPKNWLT+GIQIKIL+PFY KPW+ SK ++P KE CFL
Sbjct: 850 CTYNGVQLSETEFPKNWLTDGIQIKILFPFYLKPWHRSKVPPRQKDPLRNKEQKNDFCFL 909
Query: 2887 TVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKGFLKDSKEK 2708
TVWGMETE PFGSPR++ SF +P + FL ++VLKE+ FL SKE+
Sbjct: 910 TVWGMETEVPFGSPRKQRSFFEPIFKELRKKIIKLQKNPFLVIQVLKERINIFLNLSKER 969
Query: 2707 ESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVHESSSRIRS 2543
+ K F K IKEL K NPI L GLRK+ E +K + N +++ESS +IR
Sbjct: 970 KKSVMKTILFLKGIIKELSKRNPIPLFGLRKIDELSETKKEKNGVISNGMINESSIQIRF 1029
Query: 2542 MSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNIN--PNDTSCNDKKLE 2369
M T+ SLTEKK++DL DRTSTI+NQIEKI D K FL P+ NIN N S K L
Sbjct: 1030 MDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDNKKGFLTPEININISSNKISYPTKLLA 1089
Query: 2368 APKVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRINAQFSLDLKKGE 2198
+ K W + F+R + RLIRK +SF FL+E+IY+D L+ +IN PRI Q D
Sbjct: 1090 SIKNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYIDILICIINSPRITTQLFFDNSTKM 1149
Query: 2197 IDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPVDLSQAYVFYKFS 2018
IDK N+ I I TKK+ + +I+ KN + SQAYVFY+
Sbjct: 1150 IDKYIYNNETNKEKIAKTNKNTIRFIWTKKKPIYDISKKNAKILLS--SFSQAYVFYQLY 1207
Query: 2017 QTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSNFETNGWKNWLNS 1838
QT N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N E WKNWL
Sbjct: 1208 QTLFCNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILNSEMIQWKNWLRG 1267
Query: 1837 HYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLFY--YKKQNAYVM 1664
HY QY+ S I L K +N NQ+ + NK K S EK +L YKK N + +
Sbjct: 1268 HY--QYDLSPIRWYLLVPHKWQNRFNQTRIVQNKDLNKRHSDEKDRLILINYKKLNDFEL 1325
Query: 1663 DSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIPYNYNT--NKPPI 1490
+SL K YGYDL S K INY KDS+I +SPL++ ++I YNYN K +
Sbjct: 1326 NSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEISYNYNKIYKKGKL 1385
Query: 1489 FYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANMDTETRMDKN 1310
MP GI + L +D I++ DK DRKY DWRI FCLR K++IE+W ++DT +KN
Sbjct: 1386 INMPGGIIPIN-LEDDDILNLDKFTDRKYLDWRIFDFCLRNKVNIESWIDIDTNG--NKN 1442
Query: 1309 TKTGINYYSIINQIDTKDLSYLAIDKQ--IKPSSGNFFFFDWMGMNEEILNRPISNLHLW 1136
TKTG N Y II+++D K L +L I + I S+ FDWM MNEEIL+RPISNL+LW
Sbjct: 1443 TKTGFNNYQIIDKMDQKGLFFLKISQNGGIMASNKKKDLFDWMAMNEEILSRPISNLNLW 1502
Query: 1135 FFPELLGLYDTYRIKPWIIPTKSLL---------------------FHFNGNQTTXXXXX 1019
FFPE + LY+TY +KPWIIP + LL F F+ + +
Sbjct: 1503 FFPEFVILYNTYIMKPWIIPIQLLLLNFYENVSENKNITRKNKRDLFLFSNEKKSIELEN 1562
Query: 1018 XXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSRNPNKWKSTTEAE 839
++GS SNQEK++ ED + S MKK R ++KS TE E
Sbjct: 1563 RNQEEKESAIRDNLESDAQNQMNLGSLFSNQEKDIGEDYASSDMKKRRKKKEYKSNTEVE 1622
Query: 838 LDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEMRXXXXXXX 659
LDFFLKRY FQLRW SL+QR+IN+I+IYCLLLRL NP++IAISSIQRGEM
Sbjct: 1623 LDFFLKRYLRFQLRWDDSLNQRMINNIKIYCLLLRLINPREIAISSIQRGEMSLDILIIQ 1682
Query: 658 XXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQQKENDYKN 479
LTEL+ KG+LIIEP+RLSI+ DG IMYQ++ ISL HKS + N+ ++K K
Sbjct: 1683 KDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYREKSYVAKI 1742
Query: 478 SFDESIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLNSEKRNVLDRKKT 302
+ D+SI RH+++ E R + D VPE +L+ + RRELRI IC NS KRN + +
Sbjct: 1743 NLDKSIA--RHQKMAENRYKNDYDLLFVPEKVLSTKRRRELRILICFNSRKRNGIHKNPV 1800
Query: 301 FYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLACMNRYWFDT 122
F NN+KN G FL++ KH +K KL+KLKFFLWPNYRLEDL+CMNRYWFDT
Sbjct: 1801 FC--NNVKNWGEFLDKRKHFEK---------KKLIKLKFFLWPNYRLEDLSCMNRYWFDT 1849
Query: 121 SNGSRFSMLRIYMYPRFTI 65
+NG RF+M+RI+MYPR I
Sbjct: 1850 NNGGRFTMIRIHMYPRLQI 1868
>AEX94009.1 hypothetical chloroplast RF19 (chloroplast) [Asparagus asparagoides]
Length = 1808
Score = 1470 bits (3805), Expect = 0.0
Identities = 860/1724 (49%), Positives = 1048/1724 (60%), Gaps = 84/1724 (4%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR
Sbjct: 134 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 193
Query: 4801 KNNSIRSNKYLVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXXXXXXXX 4622
+N+SIRSNKYLVSELRN MARIFSILLFITCVYYLGR+PSPIVTKKLK
Sbjct: 194 QNHSIRSNKYLVSELRNSMARIFSILLFITCVYYLGRMPSPIVTKKLKETSETEERKE-- 251
Query: 4621 XXXXXXEIETISETKGTKQE-EGSIEEDPSPSL-------CSEEN-SXXXXXXXXXXXXX 4469
E+ ETK TKQE EGS EED + S+ ++N
Sbjct: 252 --------ESDVETKKTKQEQEGSTEEDKNSSVYKYSYLDTHQDNWELEKRNLNKNQKNH 303
Query: 4468 LWFEKPLVTLLFDYKRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPS 4289
WFEKP+VT LFD KRWNRP RYIKND+FE+AVR+EMS +FF+ C SDGK+ +SFTYPPS
Sbjct: 304 FWFEKPIVTFLFDSKRWNRPWRYIKNDRFENAVRNEMSQYFFYICPSDGKQIVSFTYPPS 363
Query: 4288 LSIFLEMIKGKILLSTTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDAL--ERGSLKL 4115
LS F EMI+ KI L TTEK S E+LYN WVYT N +RI L E+GSL L
Sbjct: 364 LSTFSEMIERKISLYTTEKLSQEDLYNYWVYTNEQKKYNLNNELISRIKTLEKEKGSLAL 423
Query: 4114 DVLEKRIRLCNDETEQDCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAF----SEEGW 3947
D+LEKR RLC+DE E+ LP+ YDPFLNG RG+ K +S MN+
Sbjct: 424 DMLEKRTRLCDDENEEKYLPKRYDPFLNGPYRGTIKN---FDSRAIMNDLIPSTADSVNL 480
Query: 3946 IWINKFHNILPTNYQ-----------XXXXXXXXXXXKYFLPEEGKLNSE---------- 3830
WINK H + + Q FL KL+ E
Sbjct: 481 FWINKIHGLFHNDSQELEHQKNRLDFGGEFLLNSNSIGNFLTSTDKLSFERARRVDSESQ 540
Query: 3829 -NRTKYLFDAVTPDRHHQRIIK-ESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAED 3656
K +FD +T D + IK +SIG++EI K V QWSYKL LEQ++ EE+ E
Sbjct: 541 AKSLKLIFDVITTDPNDLTTIKNKSIGMEEISKRVSQWSYKLTDDLEQEEEENEEESTEY 600
Query: 3655 HEIRSRKANHVVIFXXXXXXXXXXXXXXEV---------EEVFVLRYSQESDFRRDIIKG 3503
EIRSRK+ VVI+ EEV ++RYSQ+SDFRR IIKG
Sbjct: 601 PEIRSRKSKRVVIYTNNNQSTNSSASNNSASNTSTSDEEEEVALIRYSQQSDFRRGIIKG 660
Query: 3502 SMRAQRRKTVIWEPFQTNIHSPLFLDRIYKKVFFSADTSRIWNLLFKNWM-----IKSTE 3338
SMRAQRRKTV WE FQ N+HSPLFLDRI K F D S NL+F+NW+ +K +
Sbjct: 661 SMRAQRRKTVTWEMFQANVHSPLFLDRIDKTFFSFFDISETINLVFRNWVGGNQQLKISY 720
Query: 3337 FQNSSFXXXXXXXXXXXXXXXXENDRLAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLP 3158
F+ EN+R+A++E+WDT +F Q+IRG +LI S RKY+ LP
Sbjct: 721 FEEEETKEKEKTNEEKEEEKEEENERIAISEAWDTFMFSQAIRGLMLITQSFLRKYVILP 780
Query: 3157 SLIIAKNISRILLFQPPEWNEDWREWGREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKIL 2978
LIIAKNI R+LL Q PEW ED +EW +EMHVKCTYNGVQLSE EFP+NWLTEGIQIKIL
Sbjct: 781 LLIIAKNIGRMLLLQFPEWYEDLKEWNKEMHVKCTYNGVQLSETEFPQNWLTEGIQIKIL 840
Query: 2977 YPFYPKPWNSSKKRSHHRN-----PRGIKENSCFLTVWGMETEFPFGSPRRRPSFLKPXX 2813
+PF KPW SK SHHR+ + K+N FLT+WG E E PFGSPR+RPSF +P
Sbjct: 841 FPFCLKPWRRSKIGSHHRDQKIKKKKDKKDNFSFLTIWGKEAELPFGSPRKRPSFFEPIF 900
Query: 2812 XXXXXXXXXXKTQSFLGLRVLKEKTKGFLKDSKEKESWTHKKDFFQKKRIKELGKVNPIL 2633
K Q + ++V KE+ K F K SKEK W K +KEL K+NPI
Sbjct: 901 KELEKKMIKLKKQFYQVIKVFKERRKRFQKVSKEKTRWVIKIVLVINLIMKELEKINPIF 960
Query: 2632 LVGLR--KVY---ENKKMSLKENQIVHESSSRIRSMSWT--NYSLTEKKIEDLADRTSTI 2474
L+ LR KVY E+ K S N+I+ ES+++IRSM+ NYSL E KI+DLA++ TI
Sbjct: 961 LLKLRKMKVYEPNESGKDSNINNKIIRESTTQIRSMNCVNENYSLIETKIKDLANKIITI 1020
Query: 2473 KNQIEKIINDKKNTFLIPDRNINPNDTSCNDKKLEAPKVFWRIFQRRSARLIRKRHSFLN 2294
+ Q E I DKK I C+DK+ E+ K W+IF+R++ RLIRK H F+
Sbjct: 1021 RTQTEGITKDKKKIVRI-----------CDDKRSESQKDIWKIFKRKNIRLIRKSHYFIK 1069
Query: 2293 FLMEKIYMDTLLYLINIPRINAQFSLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVIST 2114
+EKIY+D LL +I IPRINAQ + K I+K ND ++ IST
Sbjct: 1070 SPIEKIYIDILLCIIKIPRINAQLFFESTKKIINKSIYNDETNQEGIEKTNQNTMNFIST 1129
Query: 2113 KKRALSNINNKNLHPFCAPVDLSQAYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIK 1934
K++ SN C LSQAYVFYK SQ Q++NKYH+RSVLQY GT FL D IK
Sbjct: 1130 IKKSFSN---------CDLSSLSQAYVFYKLSQNQLLNKYHLRSVLQYQGTYPFLSDIIK 1180
Query: 1933 NFFGAQGILNSESRHKKLSNFETNGWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQS 1754
N+ +GI +S+ R+KK+ N WKNWL SH YQYN S+ S L +K RN VNQ
Sbjct: 1181 NYCTTRGIFDSKPRYKKIHKSGMNKWKNWLRSH--YQYNLSQTKWSPLVPKKWRNRVNQC 1238
Query: 1753 HTISNKASTKLDSYEKKK--LFYYKKQNA--YVMDSLXXXXXXXXKQYGYDLLSQKYINY 1586
TI K S KLD Y KKK L +Y KQN Y +DS K YGYDLLS KYINY
Sbjct: 1239 RTIQKKDSMKLDLYRKKKDQLIHYMKQNCYPYAVDSSIRQKEKLKKHYGYDLLSSKYINY 1298
Query: 1585 REAKDSYISLSPLQVKESRKIPYNYNTNKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRK 1406
+ +SYI S LQV + +KIPYN++T+KP FY I +S YL + I+DT KN DRK
Sbjct: 1299 GNSGNSYIYGSTLQVGD-KKIPYNFSTSKPESFYRLISIAISDYLEKRSIIDTTKNMDRK 1357
Query: 1405 YFDWRIVSFCLRKKIDIEAWANMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQI 1226
+FD RI+ FC+R I+I+ WAN +T + KN KT + + + KDL ID +I
Sbjct: 1358 FFDCRILHFCIRNNIEIKTWANTHIDTIIHKNAKTETQNF---QKFEKKDLFSFTIDHKI 1414
Query: 1225 KPSSGNFFFFDWMGMNEEILNRPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLLFHF-- 1052
PS+ +FFDWMGMN+E L ISNL WFFPE + L+D Y+IKPWIIP K L+FHF
Sbjct: 1415 NPSNQKKYFFDWMGMNQERLYHTISNLEPWFFPEFVLLFDAYKIKPWIIPIKLLIFHFHF 1474
Query: 1051 ------------NGNQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNE 908
N + N++K+V E
Sbjct: 1475 YENISQNEKIGINHKKNLSISILVNQKEYLELEKKKNEQQGQEDFVFDLKKQNKKKDVEE 1534
Query: 907 DDSDSYMKKSRNPNKWKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLN 728
D + + +KK R ++KS EAEL+F LK+YFLFQLRW L+QR+IN+I++YCLLLRL
Sbjct: 1535 DYTGADIKKGRKKKQFKSKKEAELNFVLKKYFLFQLRWDDPLNQRMINNIKVYCLLLRLI 1594
Query: 727 NPKQIAISSIQRGEMRXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVI 548
+P++IAISSIQRGEM +TELI KG+ IIEP+RLS++ DG I+YQT+ +
Sbjct: 1595 DPREIAISSIQRGEMHMDAMVIQKDLTVTELIKKGIFIIEPIRLSMKKDGKHIIYQTLGV 1654
Query: 547 SLVHKSNHQTNRKNQQKENDY--KNSFDESIKRHRHERVLEKRDEKKDTFVVPENILAPR 374
SLV K+ QTN K K N Y K D SI RH + +L R++ +VPENIL+PR
Sbjct: 1655 SLVDKNKRQTNEKCIIK-NRYVDKKKIDGSIARHCN--MLVNRNKNNYDLLVPENILSPR 1711
Query: 373 CRRELRIQICLNSEKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMK 194
RRELRI IC NS NV+DR TF N+NNIKNC FL KH L+ D NK +K
Sbjct: 1712 RRRELRILICFNSRNWNVMDRNPTFCNQNNIKNCAQFLNGKKH-------LNTDANKFIK 1764
Query: 193 LKFFLWPNYRLEDLACMNRYWFDTSNGSRFSMLRIYMYPRFTIN 62
K FLWPNYRLEDLACMNRYWFDT+NGS FSM RI+MYPRF I+
Sbjct: 1765 FKLFLWPNYRLEDLACMNRYWFDTNNGSHFSMSRIHMYPRFRIS 1808
>YP_008576871.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus camaldulensis]
AGC58280.1 hypothetical chloroplast RF1 (chloroplast)
[Eucalyptus camaldulensis]
Length = 1877
Score = 1467 bits (3799), Expect = 0.0
Identities = 872/1767 (49%), Positives = 1075/1767 (60%), Gaps = 128/1767 (7%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVTKK K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPS--------PSLCSE---------- 4517
+ET ETKGT+QE EGS EEDPS P E
Sbjct: 257 ERGEGEEETDVE-METTFETKGTRQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS LWFEKPLVTLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRKKNKENSKLEIFKLKEDPFFLWFEKPLVTLLFDY 375
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN+ FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS FL+MI+ KI L
Sbjct: 376 KRWNRPLRYIKNNHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTFLKMIERKISL 435
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK S+ELY++W+YT F NR++ L + S+ LDV EKR RLCNDE ++
Sbjct: 436 LTKEKLPSDELYDHWIYTNDQKKNNLSKKFRNRMETLNKESITLDVFEKRTRLCNDENKK 495
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEA----FSEEGWIWINKFHNILPTNYQX 3899
+ LP+ YDPFLNG RG + K+ SS +N+ + E GWI NK H+IL T Q
Sbjct: 496 EYLPKIYDPFLNGPGRG---RVKFFFSSQILNKMSIKNYIETGWI--NKIHSILFTTDQE 550
Query: 3898 XXXXXXXXXXKYFLP-------------EEGKLNSENRTKYL---FDAVTPDRHHQRIIK 3767
K L E+G+++SE++ K L F+AV + +RI K
Sbjct: 551 KLEEKIDTFDKNSLSTEKKLSLFPFPETEQGRIHSEDQIKILKIFFNAVITEPKTKRIKK 610
Query: 3766 ESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXX 3587
+SIGIKEI K+VP WSYKLI LEQQ+G E AEDHEIRSRK HV+IF
Sbjct: 611 KSIGIKEISKKVPSWSYKLINDLEQQEGENEEMVAEDHEIRSRKTKHVLIFTDNDENTDA 670
Query: 3586 XXXXXE----VEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRI 3419
+EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 671 NSKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRI 730
Query: 3418 YKKVFFSADTSRIWNLLFKNWMIK-STEFQNSSFXXXXXXXXXXXXXXXXEND------- 3263
K +F S D S + + K WM K +TE + S + +
Sbjct: 731 GKPLF-SFDISGMRKFILKKWMYKKTTELRISDYTEEKKKENEKKKEEDKREEYKRQEKA 789
Query: 3262 RLAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWRE 3083
R+ +A++WD VLF Q+IRG LL+ S RKYI PS+IIAKNI+RILLFQ PEW+ED ++
Sbjct: 790 RIEIAQTWDRVLFAQAIRGSLLVTQSFLRKYILFPSVIIAKNIARILLFQFPEWSEDLKD 849
Query: 3082 WGREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKE 2903
W REMHVKCTYNGVQLSE EFPKNWLT+GIQIKIL+PFY KPW+ SK ++ KE
Sbjct: 850 WNREMHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYVKPWHRSKVPPRQKDRLRNKE 909
Query: 2902 NS---CFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKG 2732
CFLTVWGMETE PFGSPR++ SF +P + FL ++VLKE+
Sbjct: 910 QKNDFCFLTVWGMETEVPFGSPRKQRSFFEPIFKELRKKIIKLQKNPFLVIQVLKERINL 969
Query: 2731 FLKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVH 2567
FL SKE++ K F K IKEL K NPI L GLRK+ E +K + N +++
Sbjct: 970 FLNLSKERKKSVMKTILFLKGIIKELSKRNPIPLFGLRKIDELSETKKEKNGVISNGMIN 1029
Query: 2566 ESSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNIN--PNDT 2393
ESS +IR M T+ SLTEKK++DL DRTSTI+NQIEKI D K FL P+ NIN N
Sbjct: 1030 ESSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDNKKGFLTPEININISSNKI 1089
Query: 2392 SCNDKKLEAPKVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRINAQF 2222
S K L + K W + F+R + RLIRK +SF FL+E+IY++ L+ +IN PRI Q
Sbjct: 1090 SYPTKLLASIKNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYINILICIINSPRITTQL 1149
Query: 2221 SLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPVDLSQ 2042
D IDK N+ I I TKK+++S+I+ KN + SQ
Sbjct: 1150 FFDNSTKMIDKYIYNNETNKEKIAKTNKNTIRFIWTKKKSISDISKKNSKILLS--SFSQ 1207
Query: 2041 AYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSNFETN 1862
AYVFY+ QTQ N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N E
Sbjct: 1208 AYVFYQLYQTQFCNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILNSEMI 1267
Query: 1861 GWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLFY--Y 1688
WKNWL HY QY+ S I +L K RN NQ+ + NK K S EK +L Y
Sbjct: 1268 QWKNWLRGHY--QYDLSPIRWYRLVPHKWRNRFNQTRLVQNKDLNKRHSDEKDRLILINY 1325
Query: 1687 KKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIPYNYN 1508
KK N + ++SL K YGYDL S K INY KDS+I +SPL++ ++I YNYN
Sbjct: 1326 KKLNDFELNSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEISYNYN 1385
Query: 1507 T--NKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANMD 1334
K + MP GI + L +D I++ DK DRKY DWRI FCLR K++IE+W ++D
Sbjct: 1386 KIYKKGKLINMPGGIIPIN-LEDDDILNLDKFTDRKYLDWRIFDFCLRNKVNIESWIDID 1444
Query: 1333 TETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQ--IKPSSGNFFFFDWMGMNEEILNR 1160
T +KNTKTG N Y II++ID K + +L I + I S+ FDWM MNEEIL+R
Sbjct: 1445 TNG--NKNTKTGFNNYQIIDKIDQKGIFFLKICQNGGIMASNKKKDLFDWMAMNEEILSR 1502
Query: 1159 PISNLHLWFFPELLGLYDTYRIKPWIIPTKSLL---------------------FHFNGN 1043
PISNL+LWFFPE + LY+TY +KPWIIP + LL F F+
Sbjct: 1503 PISNLNLWFFPEFVILYNTYIMKPWIIPIQLLLLNFYENVSENKNITRKNKRDLFLFSNE 1562
Query: 1042 QTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSRNPNK 863
+ + ++GS SNQEK++ ED + S MKK R +
Sbjct: 1563 KKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKE 1622
Query: 862 WKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEM 683
+KS TE ELDFFLKRY FQLRW SL+QR+IN+I+IYCLLLRL NP++IAISSIQRGEM
Sbjct: 1623 YKSNTEVELDFFLKRYLRFQLRWDDSLNQRMINNIKIYCLLLRLINPREIAISSIQRGEM 1682
Query: 682 RXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQ 503
LTEL+ KG+LIIEP+RLSI+ DG IMYQ++ ISL HKS + N+ +
Sbjct: 1683 SLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYR 1742
Query: 502 QKENDYKNSFDESIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLNSEKR 326
+K K + D+SI RH ++ E R + D VPE +L+ + RRELRI+IC NS KR
Sbjct: 1743 EKSYVAKINLDKSIA--RHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKR 1800
Query: 325 NVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLAC 146
N + + F NN+KN G FL++ KH DK KL+KLKFFLWPNYRLEDL+C
Sbjct: 1801 NGIHKNPVFC--NNVKNWGEFLDKRKHFDK---------KKLIKLKFFLWPNYRLEDLSC 1849
Query: 145 MNRYWFDTSNGSRFSMLRIYMYPRFTI 65
MNRYWFDT+NG RF+M+RI+MYPR I
Sbjct: 1850 MNRYWFDTNNGGRFTMIRIHMYPRLQI 1876
>YP_008576531.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus cladocalyx]
AGC57855.1 hypothetical chloroplast RF1 (chloroplast)
[Eucalyptus cladocalyx]
Length = 1882
Score = 1467 bits (3799), Expect = 0.0
Identities = 871/1771 (49%), Positives = 1071/1771 (60%), Gaps = 132/1771 (7%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVTKK K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPS--------PSLCSE---------- 4517
IET ETKGTKQE EGS EEDPS P E
Sbjct: 257 ERGEGEEETDVE-IETTFETKGTKQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS LWFEKPLVTLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRNKNKENSKLEIFKLKKDPFFLWFEKPLVTLLFDY 375
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN+ FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS FLEMI+ KI L
Sbjct: 376 KRWNRPLRYIKNNHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTFLEMIERKISL 435
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK +S+ELY++W+YT F NR++ L +GS+ LDV EKR RLCNDE ++
Sbjct: 436 LTREKLASDELYDHWIYTNDQKKNNLSKKFRNRMETLNKGSITLDVFEKRTRLCNDENKK 495
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAFSEEGWI---WINKFHNILPTNYQXX 3896
+ LP+ YDPFLNG RG K S+ + S + +I WINK H+IL T Q
Sbjct: 496 EYLPKIYDPFLNGPGRGRVK----FFFSYQILNKMSIKNYIETGWINKIHSILFTTDQEK 551
Query: 3895 XXXXXXXXXKYFLP-------------EEGKLNSENRTKYL---FDAVTPDRHHQRIIKE 3764
K L E+G ++SE + K L F+AV + +RI K+
Sbjct: 552 FEEKIDTFDKNSLSTEKKLSLFPFPETEQGTIHSEYKIKILKIFFNAVINEPKTKRIKKK 611
Query: 3763 SIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXXX 3584
SIGIKEI K+VP SYKLI +LEQQ+G E AEDH+IRSRK HV+IF
Sbjct: 612 SIGIKEISKKVPSCSYKLINNLEQQEGENEEIVAEDHQIRSRKTKHVLIFTDNDQNTDAN 671
Query: 3583 XXXXE----VEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRIY 3416
+EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 672 SKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRIG 731
Query: 3415 KKVFFSADTSRIWNLLFKNWMIK-STEFQNSSFXXXXXXXXXXXXXXXXEND-------R 3260
K +F S D S + + K WM K +TE + + + + R
Sbjct: 732 KPLF-SFDISGMIKFILKKWMYKKTTELRIADYTEEKKKENEKKKEEDKREEYKRQEKAR 790
Query: 3259 LAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWREW 3080
LA+A++WD VLF Q+IRG LLI S RKYI PS+IIAKNI+RILLFQ PEW+ED ++W
Sbjct: 791 LAIAQTWDRVLFAQAIRGSLLITQSFLRKYILFPSVIIAKNIARILLFQFPEWSEDLKDW 850
Query: 3079 GREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKEN 2900
RE+HVKCTYNGVQLSE EFPKNWLT+GIQIKIL+PFY KPW+ SK ++P KE
Sbjct: 851 NREIHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYLKPWHRSKVPPRQKDPLRNKEQ 910
Query: 2899 S---CFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKGF 2729
CFLTVWGMETE PFGSPR++ SF +P + FL ++VLKE+ F
Sbjct: 911 KNDFCFLTVWGMETEVPFGSPRKQRSFFEPIFKELRKKIIKLQKNPFLVIQVLKERINFF 970
Query: 2728 LKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVHE 2564
L SKE++ K F K IKEL K NPI L GLRK+ E +K + N +++E
Sbjct: 971 LNLSKERKKSVMKTILFLKGIIKELSKRNPIQLFGLRKIDELSETKKEKNGVISNGMINE 1030
Query: 2563 SSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNINPNDTSCN 2384
SS +IR M T+ SLTEKK++DL DRTSTI+NQIEKI D K FL P+ NIN + +
Sbjct: 1031 SSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDNKKGFLTPEININISSNKMS 1090
Query: 2383 DKKLEAP-------KVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRI 2234
K+ P K W + F+R + RLIRK +SF FL+E+IY+D L+ +IN PRI
Sbjct: 1091 SDKISYPTKLLASIKNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYIDILICIINSPRI 1150
Query: 2233 NAQFSLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPV 2054
Q D IDK N+ I I TKK+++S+I+ KN +
Sbjct: 1151 TTQLFFDNSTKMIDKSIYNNETNKEKIAKTNKNTIRFIWTKKKSISDISKKNSKILLS-- 1208
Query: 2053 DLSQAYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSN 1874
SQAYVFY+ QTQ N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N
Sbjct: 1209 SFSQAYVFYQLYQTQFCNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILN 1268
Query: 1873 FETNGWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLF 1694
E WKNWL HY QY+ S I +L K RN NQ+ + NK K S EK +L
Sbjct: 1269 SEMIQWKNWLRGHY--QYDLSPIKWYRLVPHKWRNRFNQTRIVQNKDLNKRHSDEKDRLI 1326
Query: 1693 Y--YKKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIP 1520
YKK N + ++SL K YGYDL S K INY KDS+I +SPL++ ++I
Sbjct: 1327 LINYKKLNDFELNSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEIS 1386
Query: 1519 YNYNT--NKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAW 1346
YNYN K + MP GI + L D I++ DK DRKY DWRI FCLR K++IE+W
Sbjct: 1387 YNYNKIYKKGKLINMPGGIIPIN-LENDDILNLDKFTDRKYLDWRIFDFCLRNKVNIESW 1445
Query: 1345 ANMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQ--IKPSSGNFFFFDWMGMNEE 1172
++DT +KNTKTG N Y II+++D K L +L I + I PS+ FDWM MNEE
Sbjct: 1446 IDIDTNG--NKNTKTGFNNYQIIDKMDQKGLFFLKISQNGGIMPSNKKKDLFDWMAMNEE 1503
Query: 1171 ILNRPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLL---------------------FH 1055
IL+RPISN +LWFFPE + LY+TY +KPWIIP + LL F
Sbjct: 1504 ILSRPISNRNLWFFPEFVILYNTYIMKPWIIPIQLLLLNFYENVSENKNITRKNKRDLFL 1563
Query: 1054 FNGNQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSR 875
F+ + + ++GS SNQEK++ ED + S MKK R
Sbjct: 1564 FSNEKKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRR 1623
Query: 874 NPNKWKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQ 695
++KS TE ELDFFLKRY FQLRW SL+Q++IN+I+IYCLLLRL NP++IAISSIQ
Sbjct: 1624 KKKEYKSNTEVELDFFLKRYLRFQLRWDDSLNQKMINNIKIYCLLLRLINPREIAISSIQ 1683
Query: 694 RGEMRXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTN 515
RGEM LTEL+ KG+LIIEP+RL I+ DG IMYQ++ ISL HKS + N
Sbjct: 1684 RGEMSLDILIIQKDLTLTELMKKGILIIEPIRLFIKNDGQLIMYQSLNISLFHKSKPKIN 1743
Query: 514 RKNQQKENDYKNSFDESIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLN 338
+ ++K K + D+SI RH ++ E R + D VPE +L+ + RRELRI IC N
Sbjct: 1744 QIYREKSYVAKINLDKSIA--RHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRILICFN 1801
Query: 337 SEKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLE 158
S KRN + + F NN+KN G FL++ KH DK KL+KLKFFLWPNYRLE
Sbjct: 1802 SRKRNGIHKNPVFC--NNVKNWGEFLDKRKHFDK---------KKLIKLKFFLWPNYRLE 1850
Query: 157 DLACMNRYWFDTSNGSRFSMLRIYMYPRFTI 65
DL+CMNRYWFDT+NG RF+M+RI+MYPR I
Sbjct: 1851 DLSCMNRYWFDTNNGGRFTMIRIHMYPRLQI 1881
>YP_009257773.1 hypothetical chloroplast RF1 (chloroplast) [Acer miaotaiense]
ANH55492.1 hypothetical chloroplast RF1 (chloroplast)
[Acer miaotaiense]
Length = 1839
Score = 1466 bits (3796), Expect = 0.0
Identities = 861/1726 (49%), Positives = 1063/1726 (61%), Gaps = 87/1726 (5%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVL WI+
Sbjct: 134 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLVWIQ 193
Query: 4801 KNNSIRSN------KYLVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSN KYLVSELRN MARI+SILLFITC+YYLGRIPSPI TKKLK
Sbjct: 194 QNNSIRSNVLIRSNKYLVSELRNSMARIYSILLFITCIYYLGRIPSPIFTKKLKVKETSE 253
Query: 4639 XXXXXXXXXXXXE-IETISETKGTKQE-EGSIEEDPSPSLCSEE---------NSXXXXX 4493
IET E +GTKQE E S EEDPSPSL EE NS
Sbjct: 254 TSETEEREEETDVEIETTFERRGTKQEQEVSTEEDPSPSLFLEEKEDPDGNQENSKLEIF 313
Query: 4492 XXXXXXXXLWFEKPLVTLLFDYKRWNRPVRYIK---NDKFEDAVRDEMSHFFFFTCESDG 4322
LWFEKPL TLLFDYK+WNRP RY K N++F + VR+EMSHFFF+TC+SDG
Sbjct: 314 KEKEEKYLLWFEKPLATLLFDYKQWNRPFRYKKKKRNNRFINVVRNEMSHFFFYTCQSDG 373
Query: 4321 KERISFTYPPSLSIFLEMIKGKILLSTTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRID 4142
KERISFTYP SLS FLEMI+ K+ T EK SS+ELYNNW YT F NRI+
Sbjct: 374 KERISFTYPASLSTFLEMIQQKMSFLTKEKLSSDELYNNWSYTNEKKNNLNKE-FRNRIE 432
Query: 4141 ALERGSLKLDVLEKRIRLCNDETEQDCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAF 3962
L++GS L+ LEKR +LCND+T+Q+ LP+ YDPFL+G RG + + S +NE
Sbjct: 433 VLDKGSSTLNGLEKRTQLCNDKTKQEYLPKKYDPFLHGPYRG---RIDFFFSPLTLNETS 489
Query: 3961 SEEG--WIWINKFHNILPT-NYQXXXXXXXXXXXKYF--------LPE--EGKLNSENRT 3821
S++ WINK H +L NY K F PE + K++SE++
Sbjct: 490 SQKNIRTFWINKIHGLLLIKNYPEFEQTLDRFRIKLFSTKKVRSLFPEHTQEKIDSEDQI 549
Query: 3820 ---KYLFDAVTPDRHHQRIIKESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHE 3650
K LF+ V D + QRI K SIGIKEI K+VP+WSY IT L Q+ E A
Sbjct: 550 LILKILFNVVITDPNDQRIRKNSIGIKEISKKVPRWSYNSITGLGQKKKNRGETVAG--A 607
Query: 3649 IRSRKANHVVIFXXXXXXXXXXXXXXE--------VEEVFVLRYSQESDFRRDIIKGSMR 3494
IRSRK HVVIF ++V + YSQ+SDFRR +IKGSMR
Sbjct: 608 IRSRKFKHVVIFTDNQPKPNTSTYINTKYTKSPKQAKKVNLTHYSQQSDFRRGLIKGSMR 667
Query: 3493 AQRRKTVIWEPFQTNIHSPLFLDRIYKKVFFSADTSRIWNLLFKNWMIKSTEFQNSSFXX 3314
AQRRKT+ WE FQ N+HSPLFLDR+ K FFS D S + ++FKNWM K + + S
Sbjct: 668 AQRRKTITWELFQANVHSPLFLDRLDKPFFFSFDISELMKVIFKNWMWKQKDQKPSDSKI 727
Query: 3313 XXXXXXXXXXXXXXENDR------LAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSL 3152
E + + +AE W+T F Q +R +L+ SI RKYI LPSL
Sbjct: 728 EKQKKIDNKEEDKREKYKRKEKTEIPIAEIWNTFFFAQVLRSFVLLTQSILRKYIILPSL 787
Query: 3151 IIAKNISRILLFQPPEWNEDWREWGREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYP 2972
IIAKNI+R+LLFQ PEW+ED ++W REM+VKCT+NGVQLSE EFPKNWLTEGIQIKIL+P
Sbjct: 788 IIAKNIARMLLFQIPEWSEDLKDWNREMYVKCTHNGVQLSEREFPKNWLTEGIQIKILFP 847
Query: 2971 FYPKPWNSSKKRSHHRNPR----GIKENS-CFLTVWGMETEFPFGSPRRRPSFLKPXXXX 2807
F KPW+ SK + H++ G K N CFLTVWGME E PFG PR+RPSF KP
Sbjct: 848 FCLKPWHKSKLQFPHKDAMKKKGGQKNNDFCFLTVWGMEAELPFGPPRKRPSFFKPIFKE 907
Query: 2806 XXXXXXXXKTQSFLGLRVLKEKTKGFLKDSKEKESWTHKKDFFQKK--RIKELGKVNPIL 2633
KT+S LRVLKE+TK F + +KE + W K+ K R+KEL K N I
Sbjct: 908 LKKKIRQLKTKS---LRVLKERTKTFQQIAKETKRWVIKRILLLKGKGRVKELSKTNQIP 964
Query: 2632 LVGLRKVYE---NKKMSLKENQIVHESSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQI 2462
L LR++ E +KK + NQ++HESS +IRSM WTN +L EKKI+DL +RT+ IK +I
Sbjct: 965 LFRLREIDEFGEDKKDLIMSNQMIHESSIQIRSMDWTNLTLPEKKIKDLTNRTNIIKKKI 1024
Query: 2461 EKIINDKKNTFLIPDRNINPNDTSCNDKKLEAPKVFWRIFQRRSARLIRKRHSFLNFLME 2282
EKI +KK L + NI+ N TS K L A K W+I ++R+ RLI K + F+ F +E
Sbjct: 1025 EKITKEKKKKLLTYEINISSNKTSYRPKILGASKKIWQILKKRNTRLIGKSYFFIKFFIE 1084
Query: 2281 KIYMDTLLYLINIPRINAQFSLDLKKGE--IDKKSDNDXXXXXXXXXXXXXXIHVISTKK 2108
+IY+ L ++NIPRINA F + K I+K N+ IH IST K
Sbjct: 1085 RIYIKIFLAIVNIPRINAIFFFESPKKIQIIEKNIHNNETNKERINKTSKNGIHFISTIK 1144
Query: 2107 RALSNINNKN--LHPFCAPVDLSQAYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIK 1934
++LS ++NKN + + SQAYVFYK SQTQ+I+ Y++R V QY+GTS FLK IK
Sbjct: 1145 KSLSKVSNKNSKISYDFSFFSQSQAYVFYKLSQTQLIHFYNLRFVFQYDGTSLFLKKEIK 1204
Query: 1933 NFFGAQGILNSESRHKKLSNFETNGWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQS 1754
++F QGI + E RH+ NFE N WKNWL HY YQ + S+I L QK RN NQ
Sbjct: 1205 DYFKKQGIFHYELRHESFWNFEMNQWKNWLKGHYQYQSDLSRIRWPILVPQKWRNRANQH 1264
Query: 1753 HTISNKASTKLDSYEKKKLFYYKKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAK 1574
K K DSYEK +L + KQN + + L K Y YDLLS K +NY + K
Sbjct: 1265 SMAQKKDLNKKDSYEKNRLTHSDKQNFFEANPLQNQKDNFKKHYRYDLLSYKSLNYEDKK 1324
Query: 1573 DSYISLSPLQVKESRKIPYNYNTNKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDW 1394
DSYI S QV +I N N + +F M GI +++YL ED I+D DK DRKYFDW
Sbjct: 1325 DSYIHKSLFQVNNKEEIFSNSNIREGKLFDMLGGIPINNYLEEDNIMDMDKFSDRKYFDW 1384
Query: 1393 RIVSFCLRKKIDIEAWANMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAI--DKQIKP 1220
RI+ FCLR K+DIE W +D T + NTK + Y II++I+ K L YL I D++IKP
Sbjct: 1385 RILDFCLRNKVDIEVW--VDIGTNRNPNTKIRADKYQIIDEINKKVLFYLTIHEDEEIKP 1442
Query: 1219 SSGNFFFFDWMGMNEEILNRPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLLFHFNGNQ 1040
S+ FFFDWMGMNE IL+ PISNL LWFF EL+ ++ Y+ KPWIIP K LLF FNGN+
Sbjct: 1443 SNQKKFFFDWMGMNEAILSCPISNLELWFFRELVLFFNAYKKKPWIIPIKLLLFGFNGNE 1502
Query: 1039 ---------------------TTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQE 923
+ +GS LSNQE
Sbjct: 1503 NGNKKITRKKKEDLFISSNQKNSLELYNRSKEEKEPPDQGNPRSDAQNQVSLGSVLSNQE 1562
Query: 922 KEVNEDDSDSYMKKSRNPNKWKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCL 743
K+V + S S +KK R ++K+ TEAEL FFLK+Y FQLRW S L+QRIIN+I+IYCL
Sbjct: 1563 KDVEANSSGSDIKKRRTKKQYKNNTEAELYFFLKKYLHFQLRWDSFLNQRIINNIKIYCL 1622
Query: 742 LLRLNNPKQIAISSIQRGEMRXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMY 563
LLRL NP++IAISSIQ GEM LTEL+ G+ IIEP+RLS++ DG F +Y
Sbjct: 1623 LLRLINPREIAISSIQGGEMGLDILMIHKDFTLTELVKGGIFIIEPLRLSVKNDGRFFIY 1682
Query: 562 QTIVISLVHKSNHQTNRKNQQKENDYKNSFDESIKRHRHERVLEKRDEKKDTFVVPENIL 383
Q + ISLVHK+ Q ++ ++K +K ESI RH+R+ RD+K +VPENIL
Sbjct: 1683 QIVGISLVHKNKRQITKRYREKSYVHKKKNYESIA--RHQRMTGNRDKKNYDLLVPENIL 1740
Query: 382 APRCRRELRIQICLNSEKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNK 203
P RRELR IC N + +N + R F NN+K G L++S K+L R++ K
Sbjct: 1741 FPNRRRELRTLICFNWKNQNGIQRNSVFC--NNVKKGGHVLDKS-------KDLAREKKK 1791
Query: 202 LMKLKFFLWPNYRLEDLACMNRYWFDTSNGSRFSMLRIYMYPRFTI 65
L+KLKFFLWPNYRLEDL CMNRYWF+T+NGSRFSM+RI+MYPR I
Sbjct: 1792 LIKLKFFLWPNYRLEDLVCMNRYWFNTNNGSRFSMIRIHMYPRLQI 1837
>YP_008576701.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus aromaphloia]
AGC58110.1 hypothetical chloroplast RF1 (chloroplast)
[Eucalyptus aromaphloia]
Length = 1877
Score = 1464 bits (3789), Expect = 0.0
Identities = 870/1767 (49%), Positives = 1073/1767 (60%), Gaps = 128/1767 (7%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVTKK K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPS--------PSLCSE---------- 4517
IET ETKGT+QE EGS EEDPS P E
Sbjct: 257 ERGEGEEETDVE-IETTFETKGTRQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS LWFEKPLVTLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRNKNKENSKLEIFKLKEDPFFLWFEKPLVTLLFDY 375
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN+ FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS L+MI+ KI L
Sbjct: 376 KRWNRPLRYIKNNHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTLLKMIERKISL 435
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK S+ELY++W+YT F N+++ L + S+ LDV EKR RLCNDE ++
Sbjct: 436 LTKEKLPSDELYDHWIYTNDQKKNNLSKKFRNQMETLNKESITLDVFEKRTRLCNDENKK 495
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEA----FSEEGWIWINKFHNILPTNYQX 3899
LP+ YDPFLNG RG + K+ SS +N+ + E GWI NK H+IL T Q
Sbjct: 496 KYLPKIYDPFLNGPGRG---RVKFFFSSQILNKMSIKNYIETGWI--NKIHSILFTTDQE 550
Query: 3898 XXXXXXXXXXKYFLP-------------EEGKLNSENRTKYL---FDAVTPDRHHQRIIK 3767
K L E+G+++SE++ K L F+AV + +RI K
Sbjct: 551 KLEEKIDTFDKNSLSTEKKLSLFPFPETEQGRIHSEDQIKILKIFFNAVITEPKTKRIKK 610
Query: 3766 ESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXX 3587
+SIGIKEI K+VP WSYKLI LEQQ+G E AEDHEIRSRK HV+IF
Sbjct: 611 KSIGIKEISKKVPSWSYKLINDLEQQEGENEEMVAEDHEIRSRKTKHVLIFTDNDENTDA 670
Query: 3586 XXXXXE----VEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRI 3419
+EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 671 NSKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRI 730
Query: 3418 YKKVFFSADTSRIWNLLFKNWMIK-STEFQNSSFXXXXXXXXXXXXXXXXEND------- 3263
K +F S D S + + K WM K +TE + S + +
Sbjct: 731 GKPLF-SFDISGMIKFILKKWMYKKTTELRISDYTEEKKKENEKKKEEDKREEYKRQEKA 789
Query: 3262 RLAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWRE 3083
R+ +A++WD VLF Q+IRG LL+ S RKYI PS+IIAKNI+RILLFQ PEW+ED ++
Sbjct: 790 RIEIAQTWDRVLFAQAIRGSLLVTQSFLRKYILFPSVIIAKNIARILLFQFPEWSEDLKD 849
Query: 3082 WGREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKE 2903
W REMHVKCTYNGVQLSE EFPKNWLT+GIQIKIL+PFY KPW+ SK ++ KE
Sbjct: 850 WNREMHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYIKPWHRSKVPPRQKDRLRNKE 909
Query: 2902 NS---CFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKG 2732
CFLTVWGMETE PFGSPR++ SF +P + FL ++VLKE+
Sbjct: 910 QKNDFCFLTVWGMETEVPFGSPRKQRSFFEPIFKELRKKIIKLQKNPFLVIQVLKERINL 969
Query: 2731 FLKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVH 2567
FL SKE++ K F K IKEL K NPI L GLRK+ E +K + N +++
Sbjct: 970 FLNLSKERKKSVMKTILFLKGIIKELSKRNPIQLFGLRKIDELSETKKEKNGVISNGMIN 1029
Query: 2566 ESSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNIN--PNDT 2393
ESS +IR M T+ SLTEKK++DL DRTSTI+NQIEKI D K FL P+ NIN N
Sbjct: 1030 ESSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDNKKGFLTPEININISSNKI 1089
Query: 2392 SCNDKKLEAPKVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRINAQF 2222
S K L + K W + F+R + RLIRK +SF FL+E+IY++ L+ +IN PRI Q
Sbjct: 1090 SYPTKLLASIKNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYINILICIINSPRITTQL 1149
Query: 2221 SLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPVDLSQ 2042
D IDK N+ I I TKK+++S+I+ KN + SQ
Sbjct: 1150 FFDNSTKMIDKYISNNETNKEKIAKTNKNTIRFIWTKKKSISDISKKNSKILLS--SFSQ 1207
Query: 2041 AYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSNFETN 1862
AYVFY+ QTQ N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N E
Sbjct: 1208 AYVFYQLYQTQFCNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILNSEMI 1267
Query: 1861 GWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLFY--Y 1688
WKNWL HY QY+ S I +L K RN NQ+ + NK K S EK +L Y
Sbjct: 1268 QWKNWLRGHY--QYDLSPIRWYRLVPHKWRNRFNQTRLVQNKDLNKRHSDEKDRLILINY 1325
Query: 1687 KKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIPYNYN 1508
KK N + ++SL K YGYDL S K INY KDS+I +SPL++ ++I YNYN
Sbjct: 1326 KKLNDFELNSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEISYNYN 1385
Query: 1507 T--NKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANMD 1334
K + MP GI + L +D I++ DK DRKY DWRI FCLR K++IE+W ++D
Sbjct: 1386 KIYKKGKLINMPGGIIPIN-LEDDDILNLDKFTDRKYLDWRIFDFCLRNKVNIESWIDID 1444
Query: 1333 TETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQ--IKPSSGNFFFFDWMGMNEEILNR 1160
T +KNTKTG N Y II+++D K + +L I + I S+ FDWM MNEEIL+R
Sbjct: 1445 TNG--NKNTKTGFNNYQIIDKMDQKGIFFLKICQNGGIMASNKKKDLFDWMAMNEEILSR 1502
Query: 1159 PISNLHLWFFPELLGLYDTYRIKPWIIPTKSLL---------------------FHFNGN 1043
PISNL+LWFFPE + LY+TY +KPWIIP + LL F F+
Sbjct: 1503 PISNLNLWFFPEFVILYNTYIMKPWIIPIQLLLLNFYENVSENKNITRKNKRDLFLFSNE 1562
Query: 1042 QTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSRNPNK 863
+ + ++GS SNQEK++ ED + S MKK R +
Sbjct: 1563 KKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKE 1622
Query: 862 WKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEM 683
+KS TE ELDFFLKRY FQLRW SL+QR+IN+I+IYCLLLRL NP++IAISSIQRGEM
Sbjct: 1623 YKSNTEVELDFFLKRYLRFQLRWDDSLNQRMINNIKIYCLLLRLINPREIAISSIQRGEM 1682
Query: 682 RXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQ 503
LTEL+ KG+LIIEP+RLSI+ DG IMYQ++ ISL HKS + N+ +
Sbjct: 1683 SLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYR 1742
Query: 502 QKENDYKNSFDESIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLNSEKR 326
+K K + D+SI RH ++ E R + D VPE +L+ + RRELRI+IC NS KR
Sbjct: 1743 EKSYVAKINLDKSIA--RHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKR 1800
Query: 325 NVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLAC 146
N + + F NN+KN G FL++ KH DK KL+KLKFFLWPNYRLEDL+C
Sbjct: 1801 NGIHKNPVFC--NNVKNWGEFLDKRKHFDK---------KKLIKLKFFLWPNYRLEDLSC 1849
Query: 145 MNRYWFDTSNGSRFSMLRIYMYPRFTI 65
MNRYWFDT+NG RF+M+RI+MYPR I
Sbjct: 1850 MNRYWFDTNNGGRFTMIRIHMYPRLQI 1876
>YP_008576616.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus nitens]
AGC58025.1 hypothetical chloroplast RF1 (chloroplast)
[Eucalyptus nitens]
Length = 1877
Score = 1462 bits (3786), Expect = 0.0
Identities = 870/1767 (49%), Positives = 1074/1767 (60%), Gaps = 128/1767 (7%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVTKK K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPS--------PSLCSE---------- 4517
IET ETKGT+QE EGS EEDPS P E
Sbjct: 257 ERGEGEEETDVE-IETTFETKGTRQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS LWFEKPLVTLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRNKNKENSKLEIFQLKEDPFFLWFEKPLVTLLFDY 375
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN+ FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS FL+MI+ KI L
Sbjct: 376 KRWNRPLRYIKNNHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTFLKMIERKISL 435
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK S+ELY++W+YT F N+++ L + S+ LDV EKR RLCNDE ++
Sbjct: 436 LTKEKLPSDELYDHWIYTNDQKKNNLSKKFRNQMETLNKESITLDVFEKRTRLCNDENKK 495
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEA----FSEEGWIWINKFHNILPTNYQX 3899
LP+ YDPFLNG RG + K+ SS +N+ + E GWI NK H+IL T Q
Sbjct: 496 KYLPKIYDPFLNGPGRG---RVKFFFSSQILNKMSIKNYIETGWI--NKIHSILFTTDQE 550
Query: 3898 XXXXXXXXXXKYFLP-------------EEGKLNSENRTKYL---FDAVTPDRHHQRIIK 3767
K L E+G+++SE++ K L F+AV + +RI K
Sbjct: 551 KLEEKIDTFDKNSLSTEKKLSLFPFPETEQGRIHSEDQIKILKIFFNAVITEPKTKRIKK 610
Query: 3766 ESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXX 3587
+SIGIKEI K+VP WSYKLI LEQQ+G E AEDHEIRSRK HV+IF
Sbjct: 611 KSIGIKEISKKVPSWSYKLINDLEQQEGENEEMVAEDHEIRSRKTKHVLIFTDNDENTDA 670
Query: 3586 XXXXXE----VEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRI 3419
+EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 671 NSKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRI 730
Query: 3418 YKKVFFSADTSRIWNLLFKNWMIK-STEFQNSSFXXXXXXXXXXXXXXXXEND------- 3263
K +F S D S + + K WM K +TE + S + +
Sbjct: 731 GKPLF-SFDISGMIKFILKKWMYKKTTELRISDYTEEKKKENEKKKEEDKREEYKRQEKA 789
Query: 3262 RLAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWRE 3083
R+ +A++WD VLF Q+IRG LL+ S RKYI PS+IIAKNI+RILLFQ PEW+ED ++
Sbjct: 790 RIEIAQTWDRVLFAQAIRGSLLVTQSFLRKYILFPSVIIAKNIARILLFQFPEWSEDLKD 849
Query: 3082 WGREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKE 2903
W REMHVKCTYNGVQLSE EFPKNWLT+GIQIKIL+PFY KPW+ SK ++ KE
Sbjct: 850 WNREMHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYIKPWHRSKVPPRQKDRLRNKE 909
Query: 2902 NS---CFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKG 2732
CFLTVWGMETE PFGSPR++ SF +P + FL ++VLKE+
Sbjct: 910 QKNDFCFLTVWGMETEVPFGSPRKQRSFFEPIFKELRKKIIKLQKNPFLVIQVLKERINL 969
Query: 2731 FLKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVH 2567
FL SKE++ K F K IKEL K NPI L GLRK+ E +K + N +++
Sbjct: 970 FLNLSKERKKSVMKTILFLKGIIKELSKRNPIQLFGLRKIDELSETKKEKNGVISNGMIN 1029
Query: 2566 ESSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNIN--PNDT 2393
ESS +IR M T+ SLTEKK++DL DRTSTI+NQIEKI D K FL P+ NIN N
Sbjct: 1030 ESSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDNKKGFLTPEININISSNKI 1089
Query: 2392 SCNDKKLEAPKVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRINAQF 2222
S K L + K W + F+R + RLIRK +SF FL+E+IY++ L+ +IN PRI Q
Sbjct: 1090 SYPTKLLASIKNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYINILICIINSPRITTQL 1149
Query: 2221 SLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPVDLSQ 2042
D IDK N+ I I TKK+++S+I+ KN + SQ
Sbjct: 1150 FFDNSTKMIDKYIYNNETNKEKIAKTNKNTIRFIWTKKKSISDISKKNSKILLS--SFSQ 1207
Query: 2041 AYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSNFETN 1862
AYVFY+ QTQ N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N E
Sbjct: 1208 AYVFYQLYQTQFCNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILNSEMI 1267
Query: 1861 GWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLFY--Y 1688
WKNWL HY QY+ S I +L K RN NQ+ + NK K S EK +L Y
Sbjct: 1268 QWKNWLRGHY--QYDLSPIRWYRLVPHKWRNRFNQTRLVQNKDLNKRHSDEKDRLILINY 1325
Query: 1687 KKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIPYNYN 1508
KK N + ++SL K YGYDL S K INY KDS+I +SPL++ ++I YNYN
Sbjct: 1326 KKLNDFELNSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEISYNYN 1385
Query: 1507 T--NKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANMD 1334
K + MP GI + L +D I++ +K DRKY DWRI FCLR K++IE+W ++D
Sbjct: 1386 KIYKKGKLINMPGGIIPIN-LEDDDILNLEKFTDRKYLDWRIFDFCLRNKVNIESWIDID 1444
Query: 1333 TETRMDKNTKTGINYYSIINQIDTKDLSYLAI--DKQIKPSSGNFFFFDWMGMNEEILNR 1160
T +KNTKTG N Y II+++D K + L I + +I S+ FDWM MNEEIL+R
Sbjct: 1445 TNG--NKNTKTGFNNYQIIDKMDQKGIFILKICQNGRIMASNKKKDLFDWMAMNEEILSR 1502
Query: 1159 PISNLHLWFFPELLGLYDTYRIKPWIIPTKSLL---------------------FHFNGN 1043
PISNL+LWFFPE + LY+TY +KPWIIP + LL F F+
Sbjct: 1503 PISNLNLWFFPEFVILYNTYIMKPWIIPIQLLLLNFYENVSENKNITRKNKRDLFLFSNE 1562
Query: 1042 QTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSRNPNK 863
+ + ++GS SNQEK++ ED + S MKK R +
Sbjct: 1563 KKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKE 1622
Query: 862 WKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEM 683
+KS TE ELDFFLKRY FQLRW SL+QR+IN+I+IYCLLLRL NP++IAISSIQRGEM
Sbjct: 1623 YKSNTEVELDFFLKRYLRFQLRWDDSLNQRMINNIKIYCLLLRLINPREIAISSIQRGEM 1682
Query: 682 RXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQ 503
LTEL+ KG+LIIEP+RLSI+ DG IMYQ++ ISL HKS + N+ +
Sbjct: 1683 SLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYR 1742
Query: 502 QKENDYKNSFDESIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLNSEKR 326
+K K + D+SI RH ++ E R + D VPE +L+ + RRELRI+IC NS KR
Sbjct: 1743 EKSYVAKINLDKSIA--RHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKR 1800
Query: 325 NVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLAC 146
N + + F NN+KN G FL++ KH DK KL+KLKFFLWPNYRLEDL+C
Sbjct: 1801 NGIHKNPVFC--NNVKNWGEFLDKRKHFDK---------KKLIKLKFFLWPNYRLEDLSC 1849
Query: 145 MNRYWFDTSNGSRFSMLRIYMYPRFTI 65
MNRYWFDT+NG RF+M+RI+MYPR I
Sbjct: 1850 MNRYWFDTNNGGRFTMIRIHMYPRLQI 1876
>AGC57600.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus melliodora]
Length = 1882
Score = 1462 bits (3785), Expect = 0.0
Identities = 867/1771 (48%), Positives = 1069/1771 (60%), Gaps = 132/1771 (7%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVTKK K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPS--------PSLCSE---------- 4517
IET ETKGTKQE EGS EEDPS P E
Sbjct: 257 ERGEGEEETDVE-IETTFETKGTKQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS LWFEKPLVTLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRNKNKENSKLEIFKLKKDPFFLWFEKPLVTLLFDY 375
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN+ FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS FLEMI+ KI L
Sbjct: 376 KRWNRPLRYIKNNHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTFLEMIERKISL 435
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK +S+ELY++W+YT F NR++ L +GS+ LDV EKR RLCNDE ++
Sbjct: 436 LTREKLASDELYDHWIYTNDQKKNNLSKKFRNRMETLNKGSITLDVFEKRTRLCNDENKK 495
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAFSEEGWI---WINKFHNILPTNYQXX 3896
+ LP+ YDPFLNG RG K S+ + S + +I WINK H+IL T Q
Sbjct: 496 EYLPKIYDPFLNGPGRGRVK----FFFSYQILNKMSIKNYIETGWINKIHSILFTTDQEK 551
Query: 3895 XXXXXXXXXKYFLP-------------EEGKLNSENRTKYL---FDAVTPDRHHQRIIKE 3764
K L E+G ++SE++ K L F+AV + +RI K+
Sbjct: 552 FEEKIDTFDKNSLSTEKKLSLFPFPETEQGTIHSEDKIKILKIFFNAVINEPKTKRIKKK 611
Query: 3763 SIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXXX 3584
SIGIKEI K+VP SYKLI +LEQQ+G E AEDH+IRSRK HV+IF
Sbjct: 612 SIGIKEISKKVPSCSYKLINNLEQQEGENEEIVAEDHQIRSRKTKHVLIFTDNDQNTDAN 671
Query: 3583 XXXXE----VEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRIY 3416
+EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 672 SKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRIG 731
Query: 3415 KKVFFSADTSRIWNLLFKNWMIK-STEFQNSSFXXXXXXXXXXXXXXXXEND-------R 3260
K +F S D S + + K WM K +TE + + + + +
Sbjct: 732 KPLF-SFDISGMIKFILKKWMYKKTTELRIADYTEEKKKENEKKKEEDKREEYKRQEKAQ 790
Query: 3259 LAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWREW 3080
L +A++WD VLF Q+IRG LLI S RKYI PS+IIAKNI+RILLFQ PEW+ED ++W
Sbjct: 791 LEIAQTWDRVLFAQAIRGSLLITQSFLRKYILFPSVIIAKNIARILLFQFPEWSEDLKDW 850
Query: 3079 GREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKEN 2900
RE+HVKCTYNGVQLSE EFPKNWLT+GIQIKIL+PFY KPW+ SK ++P KE
Sbjct: 851 NREIHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYLKPWHRSKVPPRQKDPLRNKEQ 910
Query: 2899 S---CFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKGF 2729
CFLTVWGMETE PFGSPR++ SF +P + FL ++VLKE+ F
Sbjct: 911 KNDFCFLTVWGMETEVPFGSPRKQRSFFEPIFKELRKKIIKLQKNPFLVIQVLKERINPF 970
Query: 2728 LKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVHE 2564
L SKE++ K F K IKEL K NPI L GLRK+ E +K + N +++E
Sbjct: 971 LNLSKERKKSVMKTILFLKGIIKELSKRNPIQLFGLRKIDELSETKKEKNGVISNGMINE 1030
Query: 2563 SSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNINPNDTSCN 2384
SS +IR M T+ SLTEKK++DL DRTSTI+NQIEKI D K FL P+ NIN + +
Sbjct: 1031 SSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDNKKGFLTPEININISSNKMS 1090
Query: 2383 DKKLEAP-------KVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRI 2234
K+ P K W + F+R + RLIRK +SF FL+E+IY+D L+ +IN PRI
Sbjct: 1091 SDKISYPTKLLASIKNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYIDILICIINSPRI 1150
Query: 2233 NAQFSLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPV 2054
Q D IDK N+ I TKK+++S+I+ KN +
Sbjct: 1151 TTQLFFDNSTKMIDKYIYNNETNKEKIAKTNKNTTRFIWTKKKSISDISKKNSKILLS-- 1208
Query: 2053 DLSQAYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSN 1874
SQAYVFY+ QTQ N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N
Sbjct: 1209 SFSQAYVFYQLYQTQFFNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILN 1268
Query: 1873 FETNGWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLF 1694
E WKNWL HY QY+ S I +L K RN NQ+ + NK K S EK +L
Sbjct: 1269 SEMIQWKNWLRGHY--QYDLSPIKWYRLVPHKWRNRFNQTRIVQNKDLNKRHSDEKDRLI 1326
Query: 1693 Y--YKKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIP 1520
YKK N + ++SL K YGYDL S K INY KDS+I +SPL++ ++I
Sbjct: 1327 LINYKKLNDFELNSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEIS 1386
Query: 1519 YNYNT--NKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAW 1346
YNYN K + MP GI + L D I++ DK DRKY DWRI FCLR K++IE+W
Sbjct: 1387 YNYNKIYKKGKLINMPGGIIPIN-LENDDILNLDKFTDRKYLDWRIFDFCLRNKVNIESW 1445
Query: 1345 ANMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQ--IKPSSGNFFFFDWMGMNEE 1172
++DT +KNTKTG N Y II+++D K L +L I + I S+ FDWM MNEE
Sbjct: 1446 IDIDTNG--NKNTKTGFNNYQIIDKMDQKGLFFLKISQNGGIMASNKKKDLFDWMAMNEE 1503
Query: 1171 ILNRPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLL---------------------FH 1055
IL+RPISN +LWFFPE + LY+TY +KPWIIP + LL F
Sbjct: 1504 ILSRPISNRNLWFFPEFVILYNTYIMKPWIIPIQLLLLNFYENVSENKNITRKNKRDLFL 1563
Query: 1054 FNGNQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSR 875
F+ + + ++GS SNQEK++ ED + S MKK R
Sbjct: 1564 FSNEKKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRR 1623
Query: 874 NPNKWKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQ 695
++KS TE ELDFFLKRY FQLRW SL+Q++IN+I+IYCLLLRL NP++IAISSIQ
Sbjct: 1624 KKKEYKSNTEVELDFFLKRYLRFQLRWDDSLNQKMINNIKIYCLLLRLINPREIAISSIQ 1683
Query: 694 RGEMRXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTN 515
RGEM LTEL+ KG+LIIEP+RL I+ DG IMYQ++ ISL HKS + N
Sbjct: 1684 RGEMSLDILIIQKDLTLTELMKKGILIIEPIRLFIKNDGQLIMYQSLNISLFHKSKPKIN 1743
Query: 514 RKNQQKENDYKNSFDESIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLN 338
+ ++K K + D+SI RH ++ E R + D VPE +L+ + RRELRI IC N
Sbjct: 1744 QIYREKSYVAKINLDKSIA--RHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRILICFN 1801
Query: 337 SEKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLE 158
S KRN + + F NN+KN G FL++ KH DK KL+KLKFFLWPNYRLE
Sbjct: 1802 SRKRNGIHKNPVFC--NNVKNWGEFLDKRKHFDK---------KKLIKLKFFLWPNYRLE 1850
Query: 157 DLACMNRYWFDTSNGSRFSMLRIYMYPRFTI 65
DL+CMNRYWFDT+NG RF+M+RI+MYPR I
Sbjct: 1851 DLSCMNRYWFDTNNGGRFTMIRIHMYPRLQI 1881
>AGC57940.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus globulus]
Length = 1877
Score = 1462 bits (3784), Expect = 0.0
Identities = 869/1767 (49%), Positives = 1074/1767 (60%), Gaps = 128/1767 (7%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVTKK K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPS--------PSLCSE---------- 4517
IET ETKGT+QE EGS EEDPS P E
Sbjct: 257 ERGEGEEETDVE-IETTFETKGTRQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS LWFEKPLVTLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRNKNKENSKLEIFQLKEDPFFLWFEKPLVTLLFDY 375
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN+ FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS FL+MI+ KI L
Sbjct: 376 KRWNRPLRYIKNNHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTFLKMIERKISL 435
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK S+ELY++W+YT F N+++ L + S+ LDV EKR RLCNDE ++
Sbjct: 436 LTKEKLPSDELYDHWIYTNDQKKNNLSKKFRNQMETLNKESITLDVFEKRTRLCNDENKK 495
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEA----FSEEGWIWINKFHNILPTNYQX 3899
LP+ YDPFLNG RG + K+ SS +N+ + E GWI NK H+IL T Q
Sbjct: 496 KYLPKIYDPFLNGPGRG---RVKFFFSSQILNKMSIKNYIETGWI--NKIHSILFTTDQE 550
Query: 3898 XXXXXXXXXXKYFLP-------------EEGKLNSENRTKYL---FDAVTPDRHHQRIIK 3767
K L E+G+++SE++ K L F+AV + +RI K
Sbjct: 551 KLEEKIDTFDKNSLSTEKKLSLFPFPETEQGRIHSEDQIKILKIFFNAVITEPKTKRIKK 610
Query: 3766 ESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXX 3587
+SIGIKEI K+VP WSYKLI LEQQ+G E AEDHEIRSRK HV+IF
Sbjct: 611 KSIGIKEISKKVPSWSYKLINDLEQQEGENEEMVAEDHEIRSRKTKHVLIFTDNDENTDA 670
Query: 3586 XXXXXE----VEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRI 3419
+EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 671 NSKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRI 730
Query: 3418 YKKVFFSADTSRIWNLLFKNWMIK-STEFQNSSFXXXXXXXXXXXXXXXXEND------- 3263
K +F S D S + + K WM K +TE + S + +
Sbjct: 731 GKPLF-SFDISGMIKFILKKWMYKKTTELRISDYTQEKKKENEKKKEEDKREEYKRQEKA 789
Query: 3262 RLAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWRE 3083
R+ +A++WD VLF Q+IRG LL+ S RKYI PS+IIAKNI+RILLFQ PEW+ED ++
Sbjct: 790 RIEIAQTWDRVLFAQAIRGSLLVTQSFLRKYILFPSVIIAKNIARILLFQFPEWSEDLKD 849
Query: 3082 WGREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKE 2903
W REMHVKCTYNGVQLSE EFPKNWLT+GIQIKIL+PFY KPW+ SK ++ KE
Sbjct: 850 WNREMHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYIKPWHRSKVPPRQKDRLRNKE 909
Query: 2902 NS---CFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKG 2732
CFLTVWGMETE PFGSPR++ SF +P + FL ++VLKE+
Sbjct: 910 QKNDFCFLTVWGMETEVPFGSPRKQRSFFEPIFKELRKKIIKLQKNPFLVIQVLKERINL 969
Query: 2731 FLKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVH 2567
FL SKE++ K F K IKEL K NPI L GLRK+ E +K + N +++
Sbjct: 970 FLNLSKERKKSVMKTILFLKGIIKELSKRNPIQLFGLRKIDELSETKKEKNGVISNGMIN 1029
Query: 2566 ESSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNIN--PNDT 2393
ESS +IR M T+ SLTEKK++DL DRTSTI+NQIEKI D K FL P+ NIN N
Sbjct: 1030 ESSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDNKKGFLTPEININISSNKI 1089
Query: 2392 SCNDKKLEAPKVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRINAQF 2222
S K L + K W + F+R + RLIRK +SF FL+E+IY++ L+ +IN PRI Q
Sbjct: 1090 SYPTKLLASIKNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYINILICIINSPRITTQL 1149
Query: 2221 SLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPVDLSQ 2042
D IDK N+ I I TKK+++S+I+ KN + SQ
Sbjct: 1150 FFDNSTKMIDKYIYNNETNKEKIAKTNKNTIRFIWTKKKSISDISKKNSKILLS--SFSQ 1207
Query: 2041 AYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSNFETN 1862
AYVFY+ QTQ N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N E
Sbjct: 1208 AYVFYQLYQTQFCNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILNSEMI 1267
Query: 1861 GWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLFY--Y 1688
WKNWL HY QY+ S I +L K RN NQ+ + NK K S EK +L Y
Sbjct: 1268 QWKNWLRGHY--QYDLSPIRWYRLVPHKWRNRFNQTRLVQNKDLNKRHSDEKDRLILINY 1325
Query: 1687 KKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIPYNYN 1508
KK N + ++SL K YGYDL S K INY KDS+I +SPL++ ++I YNYN
Sbjct: 1326 KKLNDFELNSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEISYNYN 1385
Query: 1507 T--NKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANMD 1334
K + MP GI + L +D I++ +K DRKY DWRI FCLR K++IE+W ++D
Sbjct: 1386 KIYKKGKLINMPGGIIPIN-LEDDDILNLEKFTDRKYLDWRIFDFCLRNKVNIESWIDID 1444
Query: 1333 TETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQ--IKPSSGNFFFFDWMGMNEEILNR 1160
T +KNTKTG N Y II+++D K + +L I + I S+ FDWM MNEEIL+R
Sbjct: 1445 TNG--NKNTKTGFNNYQIIDKMDQKGIFFLKICQNGGIMASNKKKDLFDWMAMNEEILSR 1502
Query: 1159 PISNLHLWFFPELLGLYDTYRIKPWIIPTKSLL---------------------FHFNGN 1043
PISNL+LWFFPE + LY+TY +KPWIIP + LL F F+
Sbjct: 1503 PISNLNLWFFPEFVILYNTYIMKPWIIPIQLLLLNFYENVSENKNITRKNKRDLFLFSNE 1562
Query: 1042 QTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSRNPNK 863
+ + ++GS SNQEK++ ED + S MKK R +
Sbjct: 1563 KKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKE 1622
Query: 862 WKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEM 683
+KS TE ELDFFLKRY FQLRW SL+QR+IN+I+IYCLLLRL NP++IAISSIQRGEM
Sbjct: 1623 YKSNTEVELDFFLKRYLRFQLRWDDSLNQRMINNIKIYCLLLRLINPREIAISSIQRGEM 1682
Query: 682 RXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQ 503
LTEL+ KG+LIIEP+RLSI+ DG IMYQ++ ISL HKS + N+ +
Sbjct: 1683 SLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYR 1742
Query: 502 QKENDYKNSFDESIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLNSEKR 326
+K K + D+SI RH ++ E R + D VPE +L+ + RRELRI+IC NS KR
Sbjct: 1743 EKSYVAKINLDKSIA--RHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKR 1800
Query: 325 NVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLAC 146
N + + F NN+KN G FL++ KH +K KL+KLKFFLWPNYRLEDL+C
Sbjct: 1801 NGIHKNPVFC--NNVKNWGEFLDKRKHFEK---------KKLIKLKFFLWPNYRLEDLSC 1849
Query: 145 MNRYWFDTSNGSRFSMLRIYMYPRFTI 65
MNRYWFDT+NG RF+M+RI+MYPR I
Sbjct: 1850 MNRYWFDTNNGGRFTMIRIHMYPRLQI 1876
>YP_008576446.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus polybractea]
AGC57770.1 hypothetical chloroplast RF1 (chloroplast)
[Eucalyptus polybractea]
Length = 1882
Score = 1461 bits (3782), Expect = 0.0
Identities = 867/1771 (48%), Positives = 1068/1771 (60%), Gaps = 132/1771 (7%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVTKK K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPS--------PSLCSE---------- 4517
IET ETKGTKQE EGS EEDPS P E
Sbjct: 257 ERGEGEEETDVE-IETTFETKGTKQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS LWFEKPLVTLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRNKNKENSKLEIFKLKKDPFFLWFEKPLVTLLFDY 375
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS FLEMI+ KI L
Sbjct: 376 KRWNRPLRYIKNSHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTFLEMIERKISL 435
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK +S+ELY++W+YT F NR++ L +GS+ LDV EKR RLCNDE ++
Sbjct: 436 LTREKLASDELYDHWIYTNDQKKNNLSKKFRNRMETLNKGSITLDVFEKRTRLCNDENKK 495
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAFSEEGWI---WINKFHNILPTNYQXX 3896
+ LP+ YDPFLNG RG K S+ + S + +I WINK H+IL T Q
Sbjct: 496 EYLPKIYDPFLNGPGRGRVK----FFFSYQILNKMSIKNYIETGWINKIHSILFTTDQEK 551
Query: 3895 XXXXXXXXXKYFLP-------------EEGKLNSENRTKYL---FDAVTPDRHHQRIIKE 3764
K L E+G ++SE++ K L F+AV + +RI K+
Sbjct: 552 FEEKIDTFDKNSLSTEKKLSLFPFPETEQGTIHSEDKIKILKIFFNAVINEPKTKRIKKK 611
Query: 3763 SIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXXX 3584
SIGIKEI K+VP SYKLI +LEQQ+G E AEDH+IRSRK HV+IF
Sbjct: 612 SIGIKEISKKVPSCSYKLINNLEQQEGENEEIVAEDHQIRSRKTKHVLIFTDNDQNTDAN 671
Query: 3583 XXXXE----VEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRIY 3416
+EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 672 SKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRIG 731
Query: 3415 KKVFFSADTSRIWNLLFKNWMIK-STEFQNSSFXXXXXXXXXXXXXXXXEND-------R 3260
K +F S D S + + K WM K +TE + + + + +
Sbjct: 732 KPLF-SFDISGMIKFILKKWMYKKTTELRIADYTEEKKKENEKKKEEDKREEYKRQEKAQ 790
Query: 3259 LAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWREW 3080
L +A++WD VLF Q+IRG LLI S RKYI PS+IIAKNI+RILLFQ PEW+ED ++W
Sbjct: 791 LEIAQTWDRVLFAQAIRGSLLITQSFLRKYILFPSVIIAKNIARILLFQFPEWSEDLKDW 850
Query: 3079 GREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKEN 2900
RE+HVKCTYNGVQLSE EFPKNWLT+GIQIKIL+PFY KPW+ SK ++P KE
Sbjct: 851 NREIHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYLKPWHRSKVPPRQKDPLRNKEQ 910
Query: 2899 S---CFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKGF 2729
CFLTVWGMETE PFGSPR++ SF +P + FL ++VLKE+ F
Sbjct: 911 KNDFCFLTVWGMETEVPFGSPRKQRSFFEPIFKELRKKIIKLQKNPFLVIQVLKERINLF 970
Query: 2728 LKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVHE 2564
L SKE++ K F K IKEL K NPI L GLRK+ E +K + N +++E
Sbjct: 971 LNLSKERKKSVMKTILFLKGIIKELSKRNPIQLFGLRKIDELSETKKEKNGVISNGMINE 1030
Query: 2563 SSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNINPNDTSCN 2384
SS +IR M T+ SLTEKK++DL DRTSTI+NQIEKI D K FL P+ NIN + +
Sbjct: 1031 SSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDNKKGFLTPEININISSNKMS 1090
Query: 2383 DKKLEAP-------KVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRI 2234
K+ P K W + F+R + RLIRK +SF FL+E+IY+D L+ +IN PRI
Sbjct: 1091 SDKISYPTKLLASIKNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYIDILICIINSPRI 1150
Query: 2233 NAQFSLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPV 2054
Q D IDK N+ I TKK+++S+I+ KN +
Sbjct: 1151 TTQLFFDNSTKMIDKYIYNNETNKEKIAKTNKNTTRFIWTKKKSISDISKKNSKILLS-- 1208
Query: 2053 DLSQAYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSN 1874
SQAYVFY+ QTQ N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N
Sbjct: 1209 SFSQAYVFYQLYQTQFFNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILN 1268
Query: 1873 FETNGWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLF 1694
E WKNWL HY QY+ S I +L K RN NQ+ + NK K S EK +L
Sbjct: 1269 SEMIQWKNWLRGHY--QYDLSPIKWYRLVPHKWRNRFNQTRIVQNKDLNKRHSDEKDRLI 1326
Query: 1693 Y--YKKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIP 1520
YKK N + ++SL K YGYDL S K INY KDS+I +SPL++ ++I
Sbjct: 1327 LINYKKLNDFELNSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEIS 1386
Query: 1519 YNYNT--NKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAW 1346
YNYN K + MP GI + L D I++ DK DRKY DWRI FCLR K++IE+W
Sbjct: 1387 YNYNKIYKKGKLINMPGGIIPIN-LENDDILNLDKFTDRKYLDWRIFDFCLRNKVNIESW 1445
Query: 1345 ANMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQ--IKPSSGNFFFFDWMGMNEE 1172
++DT +KNTKTG N Y II+++D K L +L I + I S+ FDWM MNEE
Sbjct: 1446 IDIDTNG--NKNTKTGFNNYQIIDKMDQKGLFFLKISQNGGIMASNKKKDLFDWMAMNEE 1503
Query: 1171 ILNRPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLL---------------------FH 1055
IL+RPISN +LWFFPE + LY+TY +KPWIIP + LL F
Sbjct: 1504 ILSRPISNRNLWFFPEFVILYNTYIMKPWIIPIQLLLLNFYENVSENKNITRKNKRDLFL 1563
Query: 1054 FNGNQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSR 875
F+ + + ++GS SNQEK++ ED + S MKK R
Sbjct: 1564 FSNEKKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRR 1623
Query: 874 NPNKWKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQ 695
++KS TE ELDFFLKRY FQLRW SL+Q++IN+I+IYCLLLRL NP++IAISSIQ
Sbjct: 1624 KKKEYKSNTEVELDFFLKRYLRFQLRWDDSLNQKMINNIKIYCLLLRLINPREIAISSIQ 1683
Query: 694 RGEMRXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTN 515
RGEM LTEL+ KG+LIIEP+RL I+ DG IMYQ++ ISL HKS + N
Sbjct: 1684 RGEMSFDILIIQKDLTLTELMKKGILIIEPIRLFIKNDGQLIMYQSLNISLFHKSKPKIN 1743
Query: 514 RKNQQKENDYKNSFDESIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLN 338
+ ++K K + D+SI RH ++ E R + D VPE +L+ + RRELRI IC N
Sbjct: 1744 QIYREKSYVAKINLDKSIA--RHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRILICFN 1801
Query: 337 SEKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLE 158
S KRN + + F NN+KN G FL++ KH DK KL+KLKFFLWPNYRLE
Sbjct: 1802 SRKRNGIHKNPVFC--NNVKNWGEFLDKRKHFDK---------KKLIKLKFFLWPNYRLE 1850
Query: 157 DLACMNRYWFDTSNGSRFSMLRIYMYPRFTI 65
DL+CMNRYWFDT+NG RF+M+RI+MYPR I
Sbjct: 1851 DLSCMNRYWFDTNNGGRFTMIRIHMYPRLQI 1881
>YP_008576786.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus saligna]
AGC58195.1 hypothetical chloroplast RF1 (chloroplast)
[Eucalyptus saligna]
Length = 1877
Score = 1461 bits (3781), Expect = 0.0
Identities = 868/1767 (49%), Positives = 1073/1767 (60%), Gaps = 128/1767 (7%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVT+K K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTQKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSIEEDPS--------PSLCSE---------- 4517
IET ETKGT+QE EGS EEDPS P E
Sbjct: 257 ERGEGEEETDVE-IETTFETKGTRQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS LWFEKPL+TLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRNKNKENSKLEIFKLKEDPFFLWFEKPLMTLLFDY 375
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN+ FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS FL+MI+ KI L
Sbjct: 376 KRWNRPLRYIKNNHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTFLKMIERKIYL 435
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK S+ELY++W+YT F N+++ L + S+ LDV EKR RLCNDE ++
Sbjct: 436 LTKEKLPSDELYDHWIYTNDQKKNNLSKKFRNQMETLNKESITLDVFEKRTRLCNDEKKK 495
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEA----FSEEGWIWINKFHNILPTNYQX 3899
LP+ YDPFLNG RG + K+ SS +N+ + E GWI NK H+IL T Q
Sbjct: 496 KYLPKIYDPFLNGPGRG---RVKFFFSSQILNKMSIKNYIETGWI--NKIHSILFTTDQE 550
Query: 3898 XXXXXXXXXXKYFLP-------------EEGKLNSENRTKYL---FDAVTPDRHHQRIIK 3767
K L E+G+++SE++ K L F+AV + +RI K
Sbjct: 551 KLEEKIDTFDKNSLSTEKKLSLFPFPETEQGRIHSEDQIKILKIFFNAVITEPKTKRIKK 610
Query: 3766 ESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXX 3587
+SIGIKEI K+VP WSYKLI LEQQ+G E AEDHEIRSRK HV+IF
Sbjct: 611 KSIGIKEISKKVPSWSYKLINDLEQQEGENEEMVAEDHEIRSRKTKHVLIFTDNDENTDA 670
Query: 3586 XXXXXE----VEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRI 3419
+EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 671 NSKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRI 730
Query: 3418 YKKVFFSADTSRIWNLLFKNWMIK-STEFQNSSFXXXXXXXXXXXXXXXXEND------- 3263
K +F S D S + + K WM K +TE + S + +
Sbjct: 731 GKPLF-SFDISGMIKFILKKWMYKKTTELRISDYTEEKKKENEKKKEEDKREEYKRQEKA 789
Query: 3262 RLAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWRE 3083
R+ +A++WD VLF Q+IRG LL+ S RKYI PS+IIAKNI+RILLFQ PEW+ED ++
Sbjct: 790 RIEIAQTWDRVLFAQAIRGSLLVTQSFLRKYILFPSVIIAKNIARILLFQFPEWSEDLKD 849
Query: 3082 WGREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKE 2903
W REMHVKCTYNGVQLSE EFPKNWLT+GIQIKIL+PFY KPW+ SK ++ KE
Sbjct: 850 WNREMHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYIKPWHRSKVPPRQKDRLRNKE 909
Query: 2902 NS---CFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKG 2732
CFLTVWGMETE PFGSPR++ SF +P + FL ++VLKE+
Sbjct: 910 QKNDFCFLTVWGMETEVPFGSPRKQRSFFEPIFKELRKKIIKLQKNPFLVIQVLKERINL 969
Query: 2731 FLKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVH 2567
FL SKE++ K F K IKEL K NPI L GLRK+ E +K + N +++
Sbjct: 970 FLNLSKERKKSVMKTILFLKGIIKELSKRNPIPLFGLRKIDELSETKKEKNGVISNGMIN 1029
Query: 2566 ESSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNIN--PNDT 2393
ESS +IR M T+ SLTEKK++DL DRTSTI+NQIEKI D K FL P+ NIN N
Sbjct: 1030 ESSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDNKKGFLTPEININISSNKI 1089
Query: 2392 SCNDKKLEAPKVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRINAQF 2222
S K L + K W + F+R + RLIRK +SF FL+E+IY++ L+ +IN PRI Q
Sbjct: 1090 SYPTKLLASIKNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYINILICIINSPRITTQL 1149
Query: 2221 SLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPVDLSQ 2042
D IDK N+ I I TKK+++S+I+ KN + SQ
Sbjct: 1150 FFDNSTKMIDKYIYNNETNKEKIAKTNKNTIRFIWTKKKSISDISKKNSKILLS--SFSQ 1207
Query: 2041 AYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSNFETN 1862
AYVFY+ QTQ N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N E
Sbjct: 1208 AYVFYQLYQTQFCNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILNSEMI 1267
Query: 1861 GWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLFY--Y 1688
WKNWL HY QY+ S I +L K RN NQ+ + NK K S EK +L Y
Sbjct: 1268 QWKNWLRGHY--QYDLSPIRWYRLVPHKWRNRFNQTRLVQNKDLNKRHSDEKDRLILINY 1325
Query: 1687 KKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIPYNYN 1508
KK N + ++SL K YGYDL S K INY KDS+I +SPL++ ++I YNYN
Sbjct: 1326 KKLNDFELNSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEISYNYN 1385
Query: 1507 T--NKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANMD 1334
K + MP GI + L +D I++ DK DRKY DWRI FCLR K++IE+W ++D
Sbjct: 1386 KIYKKGKLINMPGGIIPIN-LEDDDILNLDKFTDRKYLDWRIFDFCLRNKVNIESWIDID 1444
Query: 1333 TETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQ--IKPSSGNFFFFDWMGMNEEILNR 1160
T +KNTKTG N Y II ++D K + ++ I + I S+ FDWM MNEEIL+R
Sbjct: 1445 TNG--NKNTKTGFNNYQIIEKMDQKGIFFIKICQNGGIMASNKKKDLFDWMAMNEEILSR 1502
Query: 1159 PISNLHLWFFPELLGLYDTYRIKPWIIPTKSLL---------------------FHFNGN 1043
PISNL+LWFFPE + LY+TY +KPWIIP + LL F F+
Sbjct: 1503 PISNLNLWFFPEFVILYNTYIMKPWIIPIQLLLLNFYENVSENKNITRKNKRDLFLFSNE 1562
Query: 1042 QTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSRNPNK 863
+ + ++GS SNQEK++ ED + S MKK R +
Sbjct: 1563 KKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKE 1622
Query: 862 WKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEM 683
+KS TE ELDFFLKRY FQLRW SL+QR+IN+I+IYCLLLRL NP++IAISSIQRGEM
Sbjct: 1623 YKSNTEVELDFFLKRYLRFQLRWDDSLNQRMINNIKIYCLLLRLINPREIAISSIQRGEM 1682
Query: 682 RXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQ 503
LTEL+ KG+LIIEP+RLSI+ DG IMYQ++ ISL HKS + N+ +
Sbjct: 1683 SLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYR 1742
Query: 502 QKENDYKNSFDESIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLNSEKR 326
+K K + D+SI RH ++ E R + D VPE +L+ + RRELRI+IC NS KR
Sbjct: 1743 EKSYVAKINLDKSIA--RHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKR 1800
Query: 325 NVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLAC 146
N + + F NN+KN G FL++ KH DK KL+KLKFFLWPNYRLEDL+C
Sbjct: 1801 NGIHKNPVFC--NNVKNWGEFLDKRKHFDK---------KKLIKLKFFLWPNYRLEDLSC 1849
Query: 145 MNRYWFDTSNGSRFSMLRIYMYPRFTI 65
MNRYWFDT+NG RF+M+RI+MYPR I
Sbjct: 1850 MNRYWFDTNNGGRFTMIRIHMYPRLQI 1876
>YP_008577296.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus salmonophloia]
AGC58705.1 hypothetical chloroplast RF1 (chloroplast)
[Eucalyptus salmonophloia]
Length = 1872
Score = 1458 bits (3774), Expect = 0.0
Identities = 873/1764 (49%), Positives = 1075/1764 (60%), Gaps = 125/1764 (7%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVTKK K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSI--------EEDPSPSLCSE---------- 4517
IET ETKGTKQE EGS EE P E
Sbjct: 257 ERGEGEEETDVE-IETTFETKGTKQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS WFEKPLVTLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRNKNKENSKLEIFKEDPFFL--WFEKPLVTLLFDY 373
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN+ FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS FLEMI+ KI L
Sbjct: 374 KRWNRPLRYIKNNHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTFLEMIERKISL 433
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK S+ELY++W+YT F NR++ L +GS+ LD+ EKR RLCNDE ++
Sbjct: 434 LTREKLPSDELYDHWIYTNDQKKNNLSKKFRNRMETLNKGSITLDIFEKRTRLCNDENKK 493
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAFSEEGWI---WINKFHNILPTNYQXX 3896
+ LP+ YDPFLNG RG + K+ SS +N+ S + +I WINK H+IL T Q
Sbjct: 494 EYLPKIYDPFLNGPCRG---RVKFFFSSQILNK-MSIKNYIETSWINKIHSILFTTDQEK 549
Query: 3895 XXXXXXXXXKYFLP-------------EEGKLNSENRTKYL---FDAVTPDRHHQRIIKE 3764
K L E+GK++SE++ K L F+AV + +RI K+
Sbjct: 550 FEEKIDAFDKNSLSTEKKLSLFPFPETEQGKIHSEDQIKILKIFFNAVITEPKTKRIKKK 609
Query: 3763 SIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIFXXXXXXXXXX 3584
SIGIKEI K+VP WSYKLI+ LEQ++G E AEDH+IRSRK HV+IF
Sbjct: 610 SIGIKEISKKVPSWSYKLISDLEQEEGENEEIVAEDHQIRSRKTKHVLIFTDNEENTDAN 669
Query: 3583 XXXXE----VEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRIY 3416
+EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 670 SKNTNNLDQADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQGNVHSPLFLDRIG 729
Query: 3415 KKVFFSADTSRIWNLLFKNWMIK-STEFQNSSFXXXXXXXXXXXXXXXXEND-------R 3260
K +F S D S + + K WM K +TE S + + R
Sbjct: 730 KPLF-SFDISGMIKFILKKWMYKKTTELIISDYTEEKKKENEKKKEEEKREEYKRQEKAR 788
Query: 3259 LAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWREW 3080
+ +A++WD VLF Q+IRG LL+ S RKYI PS+IIAKNI+R+LLFQ PEW+ED ++W
Sbjct: 789 IEIAQTWDRVLFAQAIRGSLLVTQSFLRKYILFPSVIIAKNIARMLLFQFPEWSEDLKDW 848
Query: 3079 GREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKEN 2900
REMHVKCTYNGVQLSE EFPKNWLT+GIQIKIL+PFY KPW+ SK ++P KE
Sbjct: 849 NREMHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYLKPWHRSKVPPPQKDPLRNKEQ 908
Query: 2899 S---CFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKGF 2729
CFLTVWGMETE PFGSPR++ SF +P + FL ++VLKE+ F
Sbjct: 909 KNDFCFLTVWGMETEVPFGSPRKQRSFFEPIFKELRKKIRKLQKNPFLVIQVLKERINLF 968
Query: 2728 LK--DSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIV 2570
L SKE++ K F K KEL K NPI L GLRK+ E +K + N ++
Sbjct: 969 LNLSKSKERKKSVMKTILFLKGIKKELSKRNPIPLFGLRKIDELSETKKEKNGVISNAMI 1028
Query: 2569 HESSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNIN--PND 2396
+ESS +IR M T+ SLTEKK++DL DRTSTI+NQIEKI DKK FL P+ NIN N
Sbjct: 1029 NESSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDKKKGFLTPEININISSNK 1088
Query: 2395 TSCNDKKLEAPKVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRINAQ 2225
S K L + + W + F+R + RLIRK +SF FL+E+IY+D L+ +IN PRI Q
Sbjct: 1089 ISYPTKLLASIRNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYIDILICIINSPRITTQ 1148
Query: 2224 FSLDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPVDLS 2045
D IDK N+ I I TKK+++S+I+NKN + S
Sbjct: 1149 LFFDNSTKMIDKYIYNNETNKEKIAKTNKNTIRFIWTKKKSISDISNKNSKILLS--SFS 1206
Query: 2044 QAYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSNFET 1865
QAYVFY+ QTQ N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N E
Sbjct: 1207 QAYVFYQLYQTQFCNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYLELKHKNILNSEM 1266
Query: 1864 NGWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLFY-- 1691
WKNWL HY QY+FS I +L K RN NQ+ + NK K S EK L
Sbjct: 1267 IQWKNWLRGHY--QYDFSPIRWYRLVPHKWRNRFNQTRIVQNKDLNKRHSDEKDPLILIN 1324
Query: 1690 YKKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIPYNY 1511
YKK N + ++SL K YGYDL S K INY KDS+I +SPL++ ++I YNY
Sbjct: 1325 YKKLNDFELNSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEISYNY 1384
Query: 1510 NT--NKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANM 1337
N K + MP GI + L +D I++ DK DRKY DWRI FCLR K++IE+W ++
Sbjct: 1385 NKIYKKGKLINMPGGIIPIN-LEDDDILNLDKFTDRKYLDWRIFDFCLRNKVNIESWIDI 1443
Query: 1336 DTETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQ--IKPSSGNFFFFDWMGMNEEILN 1163
DT +KNTKTG N Y II+++D K L +L I + I PS+ F DWM MNEEIL+
Sbjct: 1444 DTND--NKNTKTGFNNYQIIDKMDQKGLFFLKISQNGGIMPSNQKDLF-DWMAMNEEILS 1500
Query: 1162 RPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLLFHFNGNQT-----------------T 1034
RPISNL+LWFFPE + LY+TY +KPWIIP + LL +FN N+ +
Sbjct: 1501 RPISNLNLWFFPEFVILYNTYIMKPWIIPIQLLLLNFNENKNITRKNKRDLFLFSNEKKS 1560
Query: 1033 XXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSRNPNKWKS 854
++GS SNQEK + ED + S MKK R ++KS
Sbjct: 1561 IELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKYIGEDYASSDMKKRRKKKEYKS 1620
Query: 853 TTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEMRXX 674
TE ELDFFLKRY FQLRW SL+QR+IN+I+IYCLLLRL NP++IAISSIQRGEM
Sbjct: 1621 NTEVELDFFLKRYLRFQLRWDDSLNQRMINNIKIYCLLLRLINPREIAISSIQRGEMSLD 1680
Query: 673 XXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQQKE 494
LTEL+ KG+LIIEP+RLSI+ DG IMYQ++ ISL HKS + N+ ++K
Sbjct: 1681 ILIIQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYREKS 1740
Query: 493 NDYKNSFDESIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLNSEKRNVL 317
K + D+SI RH+++ E R + D VPE +L+ + RRELRI IC NS KRN +
Sbjct: 1741 YVAKINLDKSIA--RHQKMAENRYKNDYDLLFVPEKVLSTKRRRELRILICFNSRKRNGI 1798
Query: 316 DRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLACMNR 137
+ F NN+KN G FL++ KH DK KL+KLKFFLWPNYRLEDL+CMNR
Sbjct: 1799 HKNPVFC--NNVKNWGEFLDKRKHFDK---------KKLIKLKFFLWPNYRLEDLSCMNR 1847
Query: 136 YWFDTSNGSRFSMLRIYMYPRFTI 65
Y FDT+NG RF+M+RI+MYPR I
Sbjct: 1848 YSFDTNNGGRFTMIRIHMYPRLQI 1871
>YP_008575681.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus sieberi]
AGC56920.1 hypothetical chloroplast RF1 (chloroplast)
[Eucalyptus sieberi]
Length = 1864
Score = 1456 bits (3770), Expect = 0.0
Identities = 866/1755 (49%), Positives = 1068/1755 (60%), Gaps = 116/1755 (6%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIF LFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWV LVL WI+
Sbjct: 137 LIFPLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWVELVLVWIQ 196
Query: 4801 KNNSIRSNKY------LVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+NNSIRSNKY LVSELRN MARIFSILLFITCVYYLGRIPSPIVTKK K
Sbjct: 197 QNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETSETE 256
Query: 4639 XXXXXXXXXXXXEIETISETKGTKQE-EGSI--------EEDPSPSLCSE---------- 4517
IET ETKGTKQE EGS EE P E
Sbjct: 257 ERGEGEEETDVE-IETTFETKGTKQEQEGSTEEDPSLFSEEKEDPDKIDEREEIRVNEKE 315
Query: 4516 ------------------------------ENSXXXXXXXXXXXXXLWFEKPLVTLLFDY 4427
ENS WFEKPLVTLLFDY
Sbjct: 316 KTRDEFNFQETFYKDSQVYKTSYMDRNKNKENSKLEIFQEDPFFL--WFEKPLVTLLFDY 373
Query: 4426 KRWNRPVRYIKNDKFEDAVRDEMSHFFFFTCESDGKERISFTYPPSLSIFLEMIKGKILL 4247
KRWNRP+RYIKN+ FE+AVR+E+S +FF+ C ++GKERISFTYPPSLS FLEMI+ KI L
Sbjct: 374 KRWNRPLRYIKNNHFENAVRNEVSQYFFYICRNNGKERISFTYPPSLSTFLEMIERKISL 433
Query: 4246 STTEKPSSEELYNNWVYTXXXXXXXXXNAFFNRIDALERGSLKLDVLEKRIRLCNDETEQ 4067
T EK S+ELYN+WVYT F NR++ L +GS+ LDV EKR RLCNDE ++
Sbjct: 434 LTREKLPSDELYNHWVYTNDQKKNNLSKKFRNRMETLNKGSITLDVFEKRTRLCNDEKKK 493
Query: 4066 DCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNEAFSEEGWI---WINKFHNILPTNYQXX 3896
+ LP+ YDPFLNG RG + K+ SS + + S + +I WINK H+IL T Q
Sbjct: 494 EYLPKIYDPFLNGPCRG---RVKFFFSS-QIRKKMSIKNYIETGWINKIHSILFTTDQEK 549
Query: 3895 XXXXXXXXXKYFL-------------PEEGKLNSENRTKYL---FDAVTPDRHHQRIIKE 3764
K L E+G+++SE++ K L F+AV + +RI K+
Sbjct: 550 FEEKMDAFDKNSLSTEKKLSLFPFPETEQGRIHSEDQIKILKIFFNAVITEPKTKRIKKK 609
Query: 3763 SIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAEDHEIRSRKANHVVIF----XXXXXX 3596
SIGIKEI K+VP WSYKLI LEQQ+G E AEDH+IRSRK HV+IF
Sbjct: 610 SIGIKEISKKVPSWSYKLINDLEQQEGENEEIVAEDHQIRSRKTKHVLIFTDNDQNTDAN 669
Query: 3595 XXXXXXXXEVEEVFVLRYSQESDFRRDIIKGSMRAQRRKTVIWEPFQTNIHSPLFLDRIY 3416
E +EV +RYSQ+SDFRRDIIKGSMRAQRRKTVI E FQ N+HSPLFLDRI
Sbjct: 670 SKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRIG 729
Query: 3415 KKVFFSADTSRIWNLLFKNWMI-KSTEFQNSSFXXXXXXXXXXXXXXXXEND-------R 3260
K + FS D S + + K W K+TE + S + + R
Sbjct: 730 KPL-FSFDISGMIKFILKKWTYKKTTELRISDYTEEKKKENDKKKEEEKREEYKRQEKAR 788
Query: 3259 LAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLPSLIIAKNISRILLFQPPEWNEDWREW 3080
+ + ++WD VLF Q+IRG LL+ S RKYI PS+IIAKNI+RILLFQ PEW+ED ++W
Sbjct: 789 IEIVQTWDRVLFAQAIRGSLLVTQSFLRKYILFPSVIIAKNIARILLFQFPEWSEDLKDW 848
Query: 3079 GREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKILYPFYPKPWNSSKKRSHHRNPRGIKEN 2900
REMHVKCTYNGVQLSE EFPKNWLTEGIQIKIL+PFY KPW+ SK ++P KE
Sbjct: 849 NREMHVKCTYNGVQLSETEFPKNWLTEGIQIKILFPFYLKPWHRSKVPPPQKDPLRNKEK 908
Query: 2899 S---CFLTVWGMETEFPFGSPRRRPSFLKPXXXXXXXXXXXXKTQSFLGLRVLKEKTKGF 2729
CFLTVWGMETE PFGSPR++ SF +P + FL ++VLKE+ F
Sbjct: 909 KNDFCFLTVWGMETEVPFGSPRKQRSFFEPIFKELRKKIRKLQKNPFLVIQVLKERINLF 968
Query: 2728 LKDSKEKESWTHKKDFFQKKRIKELGKVNPILLVGLRKVYE-----NKKMSLKENQIVHE 2564
L SKE++ K F K IKEL K NPI L GLRK+ E +K + N +++E
Sbjct: 969 LNLSKERKKSVMKTILFLKGIIKELSKRNPIQLFGLRKMDELSETKKEKNGVISNGMINE 1028
Query: 2563 SSSRIRSMSWTNYSLTEKKIEDLADRTSTIKNQIEKIINDKKNTFLIPDRNIN--PNDTS 2390
SS +IR M T+ SLTEKK++DL DRTSTI+NQIEKI DKK FL P+ NIN N S
Sbjct: 1029 SSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDKKKGFLTPEININMSSNKIS 1088
Query: 2389 CNDKKLEAPKVFW---RIFQRRSARLIRKRHSFLNFLMEKIYMDTLLYLINIPRINAQFS 2219
K L + K W + F+R + RLIRK +SF F +E+IY+D L+Y+IN PRI Q
Sbjct: 1089 YPTKLLASIKNIWQKLKKFKRINVRLIRKSYSFFKFFIERIYIDILIYIINSPRITTQLF 1148
Query: 2218 LDLKKGEIDKKSDNDXXXXXXXXXXXXXXIHVISTKKRALSNINNKNLHPFCAPVDLSQA 2039
D IDK N+ I I TKK+++S+I+NKN + SQA
Sbjct: 1149 FDNSTKMIDKYISNNETNKEKIAKTNKNTIRFIWTKKKSISDISNKNAKILLS--SFSQA 1206
Query: 2038 YVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDRIKNFFGAQGILNSESRHKKLSNFETNG 1859
YVFY+ QTQ N Y +R VLQY+GTSFFLK+ IK++F QGI E +HK + N E
Sbjct: 1207 YVFYQLYQTQFCNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILNSEMIQ 1266
Query: 1858 WKNWLNSHYNYQYNFSKITSSQLALQKQRNGVNQSHTISNKASTKLDSYEKKKLFY--YK 1685
WK WL H YQY+ S I +L K N NQ+ + NK K S EK +L +K
Sbjct: 1267 WKKWLRGH--YQYDLSPIRWYRLVPHKWGNRFNQTRIVQNKDLNKRHSDEKDRLILTNFK 1324
Query: 1684 KQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYREAKDSYISLSPLQVKESRKIPYNYNT 1505
K N + ++SL K YGY+L S K INY KDS+I +SPL + ++I YNYN
Sbjct: 1325 KLNDFELNSLSNSKYNLQKYYGYELFSYKSINYENKKDSHIYVSPLCLNNKQEISYNYNK 1384
Query: 1504 --NKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYFDWRIVSFCLRKKIDIEAWANMDT 1331
K + MP I + L +D I++ DK DRKY DWRI FCLR K++IE+W +D
Sbjct: 1385 IYKKGKLINMPGAIIPIN-LEDDDILNLDKFTDRKYLDWRIFDFCLRNKVNIESW--IDI 1441
Query: 1330 ETRMDKNTKTGINYYSIINQIDTKDLSYLAIDKQ--IKPSSGNFFFFDWMGMNEEILNRP 1157
+T +KNTKTG N Y II+++D K L +L I + I S+ FDWM MNEEIL+ P
Sbjct: 1442 DTNGNKNTKTGFNNYQIIDKMDQKGLFFLKISQNGGIMASNKKKDLFDWMAMNEEILSCP 1501
Query: 1156 ISNLHLWFFPELLGLYDTYRIKPWIIPTKSLLFHFN----------GNQTTXXXXXXXXX 1007
ISNL+LWFFPE + LY+TY +KPWIIP + LL +FN + +
Sbjct: 1502 ISNLNLWFFPEFVILYNTYIMKPWIIPIQLLLLNFNERDLFLFSFSNEKKSIELENRNQE 1561
Query: 1006 XXXXXXXXXXXXXXXXXXDIGSDLSNQEKEVNEDDSDSYMKKSRNPNKWKSTTEAELDFF 827
++GS SNQEK++ ED + S MKK R ++KS TE ELDFF
Sbjct: 1562 EKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKEYKSNTEVELDFF 1621
Query: 826 LKRYFLFQLRWHSSLDQRIINSIQIYCLLLRLNNPKQIAISSIQRGEMRXXXXXXXXXXX 647
LKRY FQLRW SL+QR+IN+I+IYCLLLRL NP++I ISSIQRGE+
Sbjct: 1622 LKRYLRFQLRWDDSLNQRMINNIKIYCLLLRLINPREITISSIQRGEISLDILIIQKDLT 1681
Query: 646 LTELINKGVLIIEPVRLSIQGDGLFIMYQTIVISLVHKSNHQTNRKNQQKENDYKNSFDE 467
LTEL+ KG+LIIEP+RLSI+ DG IMYQ++ ISL HKS + N+ ++K K + D+
Sbjct: 1682 LTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYREKSYVAKINLDK 1741
Query: 466 SIKRHRHERVLEKRDEKK-DTFVVPENILAPRCRRELRIQICLNSEKRNVLDRKKTFYNK 290
SI RH+++ E R + D VPE +L+ + RRELRI+IC NS KRN + + F
Sbjct: 1742 SIA--RHQKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKRNGIHKNPVFC-- 1797
Query: 289 NNIKNCGTFLEESKHLDKDPKNLDRDRNKLMKLKFFLWPNYRLEDLACMNRYWFDTSNGS 110
NN+KN G FL++ KH DK KL+KLKFFLWPNYRLEDL+CMNRYWFDT+NG
Sbjct: 1798 NNVKNWGEFLDKRKHFDK---------KKLIKLKFFLWPNYRLEDLSCMNRYWFDTNNGG 1848
Query: 109 RFSMLRIYMYPRFTI 65
RF+++RI+MYPR I
Sbjct: 1849 RFTIIRIHMYPRLQI 1863
>YP_009231219.1 hypothetical chloroplast RF1 (chloroplast) [Dipteronia sinensis]
ALV83906.1 hypothetical chloroplast RF1 (chloroplast)
[Dipteronia sinensis]
Length = 1842
Score = 1456 bits (3769), Expect = 0.0
Identities = 859/1728 (49%), Positives = 1058/1728 (61%), Gaps = 89/1728 (5%)
Frame = -3
Query: 4981 LIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLFWIR 4802
LIFQLFNHFILPSS LARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVL WI+
Sbjct: 134 LIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLVWIQ 193
Query: 4801 KNNSIRSN------KYLVSELRNYMARIFSILLFITCVYYLGRIPSPIVTKKLKXXXXXX 4640
+ NSIRSN KYLVSELRN MARI+SILLFITC+YYLGRIPSPI TKKLK
Sbjct: 194 QKNSIRSNVLIRSNKYLVSELRNSMARIYSILLFITCIYYLGRIPSPIFTKKLKVKETSE 253
Query: 4639 XXXXXXXXXXXXE-IETISETKGTKQE-EGSIEEDPSPSLCSEE---------NSXXXXX 4493
IET E +GTKQE E S EEDPSPSL EE NS
Sbjct: 254 TEEREESEEETDVEIETTFERRGTKQEQEVSTEEDPSPSLFLEEKEDPDGNQENSKLEIF 313
Query: 4492 XXXXXXXXLWFEKPLVTLLFDYKRWNRPVRYIK---NDKFEDAVRDEMSHFFFFTCESDG 4322
LWFEKPL TLLFDYK+WNRP RY K N++F + VR+EMSHFFF+TC+SDG
Sbjct: 314 KEKEEKYLLWFEKPLATLLFDYKQWNRPFRYKKKKRNNRFINVVRNEMSHFFFYTCQSDG 373
Query: 4321 KERISFTYPPSLSIFLEMIKGKILLSTTEKPSSEELYNNWVYTXXXXXXXXXN--AFFNR 4148
KERISFTYP SLS FLEMI+ K+ T EK SS+ELYNNW YT F NR
Sbjct: 374 KERISFTYPASLSTFLEMIQQKMSFLTKEKLSSDELYNNWSYTNEKKEKMIKKNKEFRNR 433
Query: 4147 IDALERGSLKLDVLEKRIRLCNDETEQDCLPEGYDPFLNGTRRGSEKKKKYLNSSFNMNE 3968
I+ L++ S L+VLEKR +LCND+T+Q+ LP+ YDPFL+G RG + + S +NE
Sbjct: 434 IEVLDKRSSTLNVLEKRTQLCNDKTKQEYLPKKYDPFLHGPYRG---RIDFFFSPVTLNE 490
Query: 3967 AFSEEG--WIWINKFHNILPT-NYQXXXXXXXXXXXKYF--------LPE--EGKLNSEN 3827
S++ WINK H +L NY K F PE + K++SE+
Sbjct: 491 TSSQKNIRTFWINKIHGLLLIKNYPEFEQTLDRFRLKLFSTKKVRSLFPEHTQEKIDSED 550
Query: 3826 RT---KYLFDAVTPDRHHQRIIKESIGIKEIRKEVPQWSYKLITSLEQQDGTILEETAED 3656
K LFD V D + QRI K SI IKEI K+VP+WSY IT L Q+ E A
Sbjct: 551 GILILKILFDVVITDPNDQRIRKNSIVIKEISKKVPRWSYNSITGLGQKKKNRGETVAG- 609
Query: 3655 HEIRSRKANHVVIFXXXXXXXXXXXXXXE--------VEEVFVLRYSQESDFRRDIIKGS 3500
IRSRK+ HVVIF ++V + YSQ+SDFRR +IKGS
Sbjct: 610 -AIRSRKSKHVVIFTDNQPKPNTSTYINTKYTKSPKQAKKVSLTHYSQQSDFRRGLIKGS 668
Query: 3499 MRAQRRKTVIWEPFQTNIHSPLFLDRIYKKVFFSADTSRIWNLLFKNWMIKSTEFQNSSF 3320
MRAQRRKT+ WE FQ N+HSPLFLDR+ K FFS D S + ++FKNWM K + + S
Sbjct: 669 MRAQRRKTITWELFQANVHSPLFLDRLDKPFFFSFDISELMKVIFKNWMWKQKDQKLSDS 728
Query: 3319 XXXXXXXXXXXXXXXXENDR------LAVAESWDTVLFGQSIRGCLLIAHSIFRKYIGLP 3158
E + + +AE W+T F Q +R +L+ SI RKYI LP
Sbjct: 729 KIEKKKKIDNQEEDKREKYKRKEKTEIPIAEIWNTFFFAQVVRSFVLLTQSILRKYIILP 788
Query: 3157 SLIIAKNISRILLFQPPEWNEDWREWGREMHVKCTYNGVQLSEMEFPKNWLTEGIQIKIL 2978
SLIIAKNI+R+LLFQ PEW+ED ++W REM+VKCT+NGVQLSE EFPKNWLTEGIQIKIL
Sbjct: 789 SLIIAKNIARMLLFQIPEWSEDLKDWNREMYVKCTHNGVQLSEREFPKNWLTEGIQIKIL 848
Query: 2977 YPFYPKPWNSSKKRSHHRNPR----GIKENS-CFLTVWGMETEFPFGSPRRRPSFLKPXX 2813
+PF KPW+ SK + H++ G K N CFLTVWGME E PFG PR+RPSF +P
Sbjct: 849 FPFCLKPWHKSKLQFAHKDAMKKKGGQKNNDFCFLTVWGMEAELPFGPPRKRPSFFEPIF 908
Query: 2812 XXXXXXXXXXKTQSFLGLRVLKEKTKGFLKDSKEKESWTHKKDFFQKK--RIKELGKVNP 2639
KT+S LRVLKE+TK F K +KE + W K K R+KEL K N
Sbjct: 909 KELKKKIRQLKTKS---LRVLKERTKFFQKIAKETKRWVIKSILLLKVKGRVKELSKTNQ 965
Query: 2638 ILLVGLRKVYE---NKKMSLKENQIVHESSSRIRSMSWTNYSLTEKKIEDLADRTSTIKN 2468
I L R++ E +KK + NQ++HESS +IRSM WTN +L EKKI+DL +RTS IK
Sbjct: 966 IPLFRSREIDELGEDKKDFIMSNQMIHESSIQIRSMDWTNLALPEKKIKDLTNRTSIIKK 1025
Query: 2467 QIEKIINDKKNTFLIPDRNINPNDTSCNDKKLEAPKVFWRIFQRRSARLIRKRHSFLNFL 2288
+IEKI +KK L + NI+ N S K L A K +I ++R+ RLI K + F+ F
Sbjct: 1026 KIEKITKEKKKKLLTHEINISSNKISYRPKILGASKKILQILKKRNTRLIGKSYFFIKFF 1085
Query: 2287 MEKIYMDTLLYLINIPRINAQFSLDLKKGE--IDKKSDNDXXXXXXXXXXXXXXIHVIST 2114
+E+IY+ L ++NI RINA F + +K I+K N+ IH IST
Sbjct: 1086 IERIYIKIFLAIVNIQRINAIFFFESQKKIQIIEKNIHNNETNQEIINKTSKNGIHFIST 1145
Query: 2113 KKRALSNINNKN--LHPFCAPVDLSQAYVFYKFSQTQVINKYHMRSVLQYNGTSFFLKDR 1940
K++LS ++NKN + + SQAYVFYK SQTQ+I+ Y++R V QY+GTS FL
Sbjct: 1146 IKKSLSKVSNKNSKISYDFSFFSQSQAYVFYKLSQTQLIHFYNLRFVFQYDGTSLFLNKE 1205
Query: 1939 IKNFFGAQGILNSESRHKKLSNFETNGWKNWLNSHYNYQYNFSKITSSQLALQKQRNGVN 1760
IK++F QGI + E RH+ NFE N WKNWL +HY YQ + S+I L QK RN N
Sbjct: 1206 IKDYFKKQGIFHYELRHESFWNFEMNQWKNWLKAHYQYQSDLSRIRWPILVPQKWRNRAN 1265
Query: 1759 QSHTISNKASTKLDSYEKKKLFYYKKQNAYVMDSLXXXXXXXXKQYGYDLLSQKYINYRE 1580
Q K K DSYEK +L +Y KQN + D L K Y YDLLS K INY +
Sbjct: 1266 QHSMAQKKDLNKKDSYEKNRLTHYDKQNFFEEDPLQNQKDNFKKHYRYDLLSYKSINYED 1325
Query: 1579 AKDSYISLSPLQVKESRKIPYNYNTNKPPIFYMPAGIYMSHYLGEDCIVDTDKNPDRKYF 1400
KDSYI S Q +I N N + +F M GI +++YL ED I+D DK DRKY
Sbjct: 1326 KKDSYIHKSLFQGNNKEEIFSNSNIREGKLFDMLGGIPINNYLEEDDIMDMDKFSDRKYL 1385
Query: 1399 DWRIVSFCLRKKIDIEAWANMDTETRMDKNTKTGINYYSIINQIDTKDLSYLAI--DKQI 1226
DWRI+ FCLR K+DIE W +D T + NTK G + Y II++I+ K L YL I D++I
Sbjct: 1386 DWRILDFCLRNKVDIEVW--VDIGTNRNPNTKIGADKYQIIDEINKKVLFYLTIHEDEEI 1443
Query: 1225 KPSSGNFFFFDWMGMNEEILNRPISNLHLWFFPELLGLYDTYRIKPWIIPTKSLLFHFNG 1046
KPS+ FFFDWMGMNE IL+ PISNL LWFF EL+ ++ Y+ KPWIIP K LLF FNG
Sbjct: 1444 KPSNQKKFFFDWMGMNEAILSCPISNLELWFFRELVLFFNAYKKKPWIIPIKLLLFSFNG 1503
Query: 1045 NQ---------------------TTXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGSDLSN 929
N+ + +GS LSN
Sbjct: 1504 NENGNKKITRKKKEDLFISSNQKNSLELYNRSKEEKEPPDQGNPRSDAQNQVSLGSVLSN 1563
Query: 928 QEKEVNEDDSDSYMKKSRNPNKWKSTTEAELDFFLKRYFLFQLRWHSSLDQRIINSIQIY 749
QEK+V + S S +KK R ++K+ TEAEL FFLK+Y FQLRW S L+QRIIN+I+IY
Sbjct: 1564 QEKDVEANSSGSDIKKRRTKKQYKNNTEAELYFFLKKYLRFQLRWDSFLNQRIINNIKIY 1623
Query: 748 CLLLRLNNPKQIAISSIQRGEMRXXXXXXXXXXXLTELINKGVLIIEPVRLSIQGDGLFI 569
CLLLRL NP++IAISSIQ GEM LTEL+ G+ IIEP+RLS++ DG F
Sbjct: 1624 CLLLRLINPREIAISSIQGGEMGLDILMIHKDFTLTELVKGGIFIIEPLRLSVKNDGQFF 1683
Query: 568 MYQTIVISLVHKSNHQTNRKNQQKENDYKNSFDESIKRHRHERVLEKRDEKKDTFVVPEN 389
+YQ + ISLVHK+ Q N++ ++K +K ESI RH+R+ RD+K +VPEN
Sbjct: 1684 IYQIVGISLVHKNKRQINKRYREKSYVHKKKNYESIA--RHQRITGNRDKKNYDLLVPEN 1741
Query: 388 ILAPRCRRELRIQICLNSEKRNVLDRKKTFYNKNNIKNCGTFLEESKHLDKDPKNLDRDR 209
IL P RRELR IC N + +N + R F NN+K G L++S K+L R++
Sbjct: 1742 ILFPNRRRELRTLICFNWKNQNGIQRNSVFC--NNVKKGGHVLDKS-------KDLAREK 1792
Query: 208 NKLMKLKFFLWPNYRLEDLACMNRYWFDTSNGSRFSMLRIYMYPRFTI 65
KL+KLKFFLWPNYRLEDL CMNRYWF+T+NGSRFSM+RI+MYPR I
Sbjct: 1793 KKLIKLKFFLWPNYRLEDLVCMNRYWFNTNNGSRFSMIRIHMYPRLQI 1840