BLASTX nr result
ID: Papaver31_contig00057618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00057618
(616 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008353155.1| PREDICTED: putative ribonuclease H protein A... 100 4e-24
ref|XP_008388177.1| PREDICTED: putative ribonuclease H protein A... 100 4e-24
ref|XP_009145592.1| PREDICTED: putative ribonuclease H protein A... 103 1e-23
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 98 3e-23
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 98 3e-23
ref|XP_009117698.1| PREDICTED: putative ribonuclease H protein A... 98 2e-22
ref|XP_008372905.1| PREDICTED: uncharacterized protein LOC103436... 98 2e-22
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 101 3e-22
ref|XP_008367096.1| PREDICTED: putative ribonuclease H protein A... 100 4e-22
ref|XP_009367701.1| PREDICTED: uncharacterized protein LOC103957... 94 2e-21
ref|XP_010412448.1| PREDICTED: uncharacterized protein LOC104698... 94 2e-21
ref|XP_010506884.1| PREDICTED: uncharacterized protein LOC104783... 94 2e-21
ref|XP_010451822.1| PREDICTED: uncharacterized protein LOC104734... 94 2e-21
ref|XP_009140406.1| PREDICTED: putative ribonuclease H protein A... 97 2e-21
ref|XP_010473926.1| PREDICTED: uncharacterized protein LOC104753... 102 4e-21
ref|XP_013705040.1| PREDICTED: uncharacterized protein LOC106408... 96 5e-21
ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein A... 107 5e-21
ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 107 5e-21
ref|XP_009139523.1| PREDICTED: putative ribonuclease H protein A... 94 6e-21
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera] 106 8e-21
>ref|XP_008353155.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 637
Score = 100 bits (249), Expect(2) = 4e-24
Identities = 49/150 (32%), Positives = 83/150 (55%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
GV + +K S +++ + +GK+ G KR +S AGR LI++V +P Y + P
Sbjct: 12 GVPAIWGRSKRSGLAYVKGRLLGKIQGWKRSTISQAGREVLIKAVAQAVPAYPMNLFKFP 71
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
T N L +I FWW +D NR +H++ E KE+GG+G+ C ++ N AL+ K
Sbjct: 72 KTFCNDLDALISKFWWGQNDGENR-IHWVSKEQMGKSKEEGGLGLRCFTEFNNALLAKQC 130
Query: 361 QRFLHDKDTLWVRILHAKYLRNQAFWEIKK 450
R L + ++LW ++ +Y N +F++ K+
Sbjct: 131 WRLLSEPNSLWASVIKGRYFPNCSFFDAKR 160
Score = 38.1 bits (87), Expect(2) = 4e-24
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWIPFIPRGNP 595
W ++L R+ + G + + NG+D+ ++ D W+P IP G+P
Sbjct: 168 WSSLLVGREIIRGGAHWQIMNGKDVRVWVDKWLPSIPSGHP 208
>ref|XP_008388177.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 586
Score = 100 bits (249), Expect(2) = 4e-24
Identities = 49/150 (32%), Positives = 83/150 (55%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
GV + +K S +++ + +GK+ G KR +S AGR LI++V +P Y + P
Sbjct: 12 GVPAIWGRSKRSGLAYVKGRLLGKIQGWKRSTISQAGREVLIKAVAQAVPAYPMNLFKFP 71
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
T N L +I FWW +D NR +H++ E KE+GG+G+ C ++ N AL+ K
Sbjct: 72 KTFCNDLDALISKFWWGQNDGENR-IHWVSKEQMGKSKEEGGLGLRCFTEFNNALLAKQC 130
Query: 361 QRFLHDKDTLWVRILHAKYLRNQAFWEIKK 450
R L + ++LW ++ +Y N +F++ K+
Sbjct: 131 WRLLSEPNSLWASVIKGRYFPNCSFFDAKR 160
Score = 38.1 bits (87), Expect(2) = 4e-24
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWIPFIPRGNP 595
W ++L R+ + G + + NG+D+ ++ D W+P IP G+P
Sbjct: 168 WSSLLVGREIIRGGAHWQIMNGKDVRVWVDKWLPSIPSGHP 208
>ref|XP_009145592.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 615
Score = 103 bits (256), Expect(2) = 1e-23
Identities = 53/145 (36%), Positives = 82/145 (56%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
G+ + +G+KV +FS++ E+ K++G LS G+ LI++V + +PV ++ P
Sbjct: 88 GLPEVLKGSKVKHFSYIKERLCKKISGWHARTLSQGGKEVLIKAVASALPVAAMSVFKFP 147
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
T+I L + FWW D+ RK+H+L W+ +PKE+GGMG L NQAL+ K A
Sbjct: 148 KTLIASLHSAMATFWWSSDEH-KRKIHWLSWDKLCIPKEQGGMGFRDLECFNQALLAKQA 206
Query: 361 QRFLHDKDTLWVRILHAKYLRNQAF 435
R + D D L R++ KY N F
Sbjct: 207 WRIIDDDDCLMSRVMCGKYFENNNF 231
Score = 33.9 bits (76), Expect(2) = 1e-23
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWI 571
W +I+ R L +G +VGNGQ I ++++PW+
Sbjct: 244 WRSIIFGRNLLKQGMKHLVGNGQTINVWSEPWL 276
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 98.2 bits (243), Expect(2) = 3e-23
Identities = 51/143 (35%), Positives = 75/143 (52%)
Frame = +1
Query: 40 FSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIPNTIINMLTQIIRD 219
F FL E+ ++ G LS AG T++++V IP Y ++ IP +I + I D
Sbjct: 780 FKFLPERIWKRVNGWTDRPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIAD 839
Query: 220 FWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLAQRFLHDKDTLWVR 399
WW +D +KMH+ W W + PK GGMG + NQA++ + R L D D+L R
Sbjct: 840 HWWGFEDG-KKKMHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSR 898
Query: 400 ILHAKYLRNQAFWEIKKPKKMIF 468
+L +Y N +FWE +PK F
Sbjct: 899 VLKGRYFPNSSFWEAAQPKSPSF 921
Score = 37.4 bits (85), Expect(2) = 3e-23
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 470 TWMAILESRKELGKGCN*MVGNGQDILIFNDPWIP 574
TW ++L R+ L KG VG+G+ I IF+D WIP
Sbjct: 922 TWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP 956
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 98.2 bits (243), Expect(2) = 3e-23
Identities = 51/143 (35%), Positives = 75/143 (52%)
Frame = +1
Query: 40 FSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIPNTIINMLTQIIRD 219
F FL E+ ++ G LS AG T++++V IP Y ++ IP +I + I D
Sbjct: 737 FKFLPERIWKRVNGWTDRPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIAD 796
Query: 220 FWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLAQRFLHDKDTLWVR 399
WW +D +KMH+ W W + PK GGMG + NQA++ + R L D D+L R
Sbjct: 797 HWWGFEDG-KKKMHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSR 855
Query: 400 ILHAKYLRNQAFWEIKKPKKMIF 468
+L +Y N +FWE +PK F
Sbjct: 856 VLKGRYFPNSSFWEAAQPKSPSF 878
Score = 37.4 bits (85), Expect(2) = 3e-23
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 470 TWMAILESRKELGKGCN*MVGNGQDILIFNDPWIP 574
TW ++L R+ L KG VG+G+ I IF+D WIP
Sbjct: 879 TWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP 913
>ref|XP_009117698.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 501
Score = 97.8 bits (242), Expect(2) = 2e-22
Identities = 49/139 (35%), Positives = 79/139 (56%)
Frame = +1
Query: 19 QGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIPNTIINM 198
+G+KV FS++ E+ ++G LS G+ +I++V + +PV ++ +P T+ +
Sbjct: 55 KGSKVQLFSYIKERMSKIISGWHARTLSQGGKEVMIKAVASAVPVSAMSCYKLPKTVCSN 114
Query: 199 LTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLAQRFLHD 378
LT I +FWW + RK+H+L W+ LPKE GG+G L NQAL+ K A R +H
Sbjct: 115 LTSAIANFWWSSVEH-KRKIHWLSWDKMCLPKESGGLGFKDLECFNQALLAKQAWRLIHC 173
Query: 379 KDTLWVRILHAKYLRNQAF 435
+D L +++ KY N F
Sbjct: 174 EDCLLTKVMKGKYFENNDF 192
Score = 35.4 bits (80), Expect(2) = 2e-22
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWI 571
W +IL R+ L KG VGNG+++L++ D W+
Sbjct: 205 WRSILHGRELLEKGLKRAVGNGRNLLVWTDRWL 237
>ref|XP_008372905.1| PREDICTED: uncharacterized protein LOC103436258 [Malus domestica]
Length = 1222
Score = 97.8 bits (242), Expect(2) = 2e-22
Identities = 49/150 (32%), Positives = 82/150 (54%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
GV + +K +++ + +GKL G K+ LS AGR LI++V+ IP Y + P
Sbjct: 597 GVPXIWGRSKKRGLAYVKGRILGKLQGWKQSALSRAGREVLIKAVVQAIPAYPMCIFKFP 656
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
+ L ++ FWW + +RK+H++ + LPK+ GG+G + N AL+ K
Sbjct: 657 XVVCXELDALVARFWWGSHGZ-BRKIHWVSKZVLGLPKDMGGLGFRNFXEFNXALLAKQC 715
Query: 361 QRFLHDKDTLWVRILHAKYLRNQAFWEIKK 450
R L + ++LW R++ A+Y + +FWE KK
Sbjct: 716 WRLLTEPNSLWARVIKARYFXHCSFWEAKK 745
Score = 35.0 bits (79), Expect(2) = 2e-22
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWIPFIPRGNP 595
W ++L R+ L G + + G+ + ++ D W+P +P G+P
Sbjct: 753 WSSLLSGRELLASGSHWQIMGGEXVRVWVDRWLPSLPSGHP 793
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 101 bits (251), Expect(2) = 3e-22
Identities = 50/138 (36%), Positives = 77/138 (55%)
Frame = +1
Query: 22 GNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIPNTIINML 201
G+K F F+ EK +LTG LS G+ L++S+ +PVY ++ +P + L
Sbjct: 758 GSKRDLFGFIKEKLQSRLTGWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKL 817
Query: 202 TQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLAQRFLHDK 381
T ++ DFWW + RK+H+L W+ LPK++GG G L NQAL+ K A R L +K
Sbjct: 818 TTVMMDFWWNSMQQ-KRKIHWLSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEK 876
Query: 382 DTLWVRILHAKYLRNQAF 435
+L+ R+ ++Y N F
Sbjct: 877 GSLFSRVFQSRYFSNSDF 894
Score = 31.2 bits (69), Expect(2) = 3e-22
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWI 571
W +IL R+ L +G ++GNGQ ++ D W+
Sbjct: 907 WRSILFGRELLMQGLRTVIGNGQKTFVWTDKWL 939
>ref|XP_008367096.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 924
Score = 100 bits (250), Expect(2) = 4e-22
Identities = 50/150 (33%), Positives = 82/150 (54%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
GV + +K +++ ++ + K+ G K+ LS AG+ LI++V+ IP Y + P
Sbjct: 299 GVPTIWGXSKKGGLAYVKDRVLEKVQGWKQSTLSSAGKEVLIKAVIQAIPAYPMNIFKFP 358
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
N L II +FWW H+ R++H++ LPK +GG+G D N AL+ K
Sbjct: 359 ANFCNELDSIISNFWWGHNGN-KRRIHWVSKNIMGLPKAEGGLGFRSFRDFNDALLAKQC 417
Query: 361 QRFLHDKDTLWVRILHAKYLRNQAFWEIKK 450
R LHDK +LW R++ A+Y + +F + K+
Sbjct: 418 WRLLHDKHSLWARVMKARYFPHCSFLDAKR 447
Score = 31.2 bits (69), Expect(2) = 4e-22
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWIPFIPRGNPF*R 604
W ++L R L + + NG+ + ++ D W+P +P G+P R
Sbjct: 455 WSSLLSGRDLLLBESHWQIFNGKXVRVWLDRWLPTLPVGHPLPR 498
>ref|XP_009367701.1| PREDICTED: uncharacterized protein LOC103957282 [Pyrus x
bretschneideri]
Length = 1363
Score = 94.4 bits (233), Expect(2) = 2e-21
Identities = 46/150 (30%), Positives = 82/150 (54%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
GV + +K +++ + + KL G K+ +LS+AG+ LI++V+ IP Y ++ P
Sbjct: 784 GVPAIWGRSKQRGLAYVKGRIMEKLQGWKQSSLSHAGKEVLIKAVIQAIPAYPMSIFKFP 843
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
+ N L ++ FWW + K+H++ E +PKE GG+G D N AL+ K
Sbjct: 844 KVVCNELDALVAGFWWGCKEG-GHKIHWVSKEVLGIPKELGGLGFRNFQDFNDALLAKQC 902
Query: 361 QRFLHDKDTLWVRILHAKYLRNQAFWEIKK 450
R + + ++LW +++ A+Y + + WE KK
Sbjct: 903 WRLITEPESLWAQVIKARYFPHCSIWEAKK 932
Score = 35.4 bits (80), Expect(2) = 2e-21
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWIPFIPRGNP 595
W ++L R+ + G + V GQ++ ++ D W+P +P G+P
Sbjct: 940 WSSLLYGRELIRGGSHWQVMGGQEVRVWQDRWLPSLPLGHP 980
>ref|XP_010412448.1| PREDICTED: uncharacterized protein LOC104698743 [Camelina sativa]
Length = 1329
Score = 93.6 bits (231), Expect(2) = 2e-21
Identities = 46/135 (34%), Positives = 74/135 (54%)
Frame = +1
Query: 22 GNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIPNTIINML 201
G+K FSF+ E+ G+ TG LS G+ +I+S+ +P + ++ +P TI + L
Sbjct: 726 GSKTKVFSFVRERLQGRTTGWSARLLSKGGKEVMIKSIATAVPTFVMSCFRLPKTITSKL 785
Query: 202 TQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLAQRFLHDK 381
+ + +FWW D + MH+L WE K++GG+G + D N AL+ K R +
Sbjct: 786 SSAVANFWWSSDGRTG-GMHWLAWEKLCCSKQQGGLGFRNVDDFNSALLAKQLWRLIEYP 844
Query: 382 DTLWVRILHAKYLRN 426
D+L+ RIL +Y RN
Sbjct: 845 DSLFARILKGRYYRN 859
Score = 36.2 bits (82), Expect(2) = 2e-21
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWIP 574
W +I+ +R + KG VG+G+ I I+ DPWIP
Sbjct: 875 WRSIISARSLVQKGLIKRVGSGESISIWTDPWIP 908
>ref|XP_010506884.1| PREDICTED: uncharacterized protein LOC104783422 [Camelina sativa]
Length = 1248
Score = 93.6 bits (231), Expect(2) = 2e-21
Identities = 46/135 (34%), Positives = 74/135 (54%)
Frame = +1
Query: 22 GNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIPNTIINML 201
G+K FSF+ E+ G+ TG LS G+ +I+S+ +P + ++ +P TI + L
Sbjct: 645 GSKTKVFSFVRERLQGRTTGWSARLLSKGGKEVMIKSIATAVPTFVMSCFRLPKTITSKL 704
Query: 202 TQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLAQRFLHDK 381
+ + +FWW D + MH+L WE K++GG+G + D N AL+ K R +
Sbjct: 705 SSAVANFWWSSDGRTG-GMHWLAWEKLCCSKQQGGLGFRNVDDFNSALLAKQLWRLIEYP 763
Query: 382 DTLWVRILHAKYLRN 426
D+L+ RIL +Y RN
Sbjct: 764 DSLFARILKGRYYRN 778
Score = 36.2 bits (82), Expect(2) = 2e-21
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWIP 574
W +I+ +R + KG VG+G+ I I+ DPWIP
Sbjct: 794 WRSIISARSLVQKGLIKRVGSGESISIWTDPWIP 827
>ref|XP_010451822.1| PREDICTED: uncharacterized protein LOC104734004 [Camelina sativa]
Length = 1120
Score = 93.6 bits (231), Expect(2) = 2e-21
Identities = 46/135 (34%), Positives = 74/135 (54%)
Frame = +1
Query: 22 GNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIPNTIINML 201
G+K FSF+ E+ G+ TG LS G+ +I+S+ +P + ++ +P TI + L
Sbjct: 645 GSKTKVFSFVRERLQGRTTGWSARLLSKGGKEVMIKSIATAVPTFVMSCFRLPKTITSKL 704
Query: 202 TQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLAQRFLHDK 381
+ + +FWW D + MH+L WE K++GG+G + D N AL+ K R +
Sbjct: 705 SSAVANFWWSSDGRTG-GMHWLAWEKLCCSKQQGGLGFRNVDDFNSALLAKQLWRLIEYP 763
Query: 382 DTLWVRILHAKYLRN 426
D+L+ RIL +Y RN
Sbjct: 764 DSLFARILKGRYYRN 778
Score = 36.2 bits (82), Expect(2) = 2e-21
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWIP 574
W +I+ +R + KG VG+G+ I I+ DPWIP
Sbjct: 794 WRSIISARSLVQKGLIKRVGSGESISIWTDPWIP 827
>ref|XP_009140406.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 747
Score = 97.1 bits (240), Expect(2) = 2e-21
Identities = 47/145 (32%), Positives = 82/145 (56%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
G+ + G+K+ FS+L E+ +++G LS G+ L+++V A +PV+ ++ IP
Sbjct: 126 GLPEVLMGSKIKTFSYLKERMSKRVSGWHARTLSQGGKEVLLKAVGAALPVHAMSVYKIP 185
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
+I+ L ++ FWW + + RK+H++ W+ LPKE GGMG L NQAL+ +
Sbjct: 186 KMVISSLHSVMASFWWSNVE-YKRKIHWMSWDKLCLPKESGGMGFKDLECFNQALLARQG 244
Query: 361 QRFLHDKDTLWVRILHAKYLRNQAF 435
R + +D+L ++ KY N +F
Sbjct: 245 WRIIQYEDSLLAQVFKGKYFENDSF 269
Score = 32.7 bits (73), Expect(2) = 2e-21
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWI 571
W +++ R+ L KG ++G+G+ + ++++PWI
Sbjct: 282 WRSLMYGRELLKKGLKHLIGDGRSVKVWSEPWI 314
>ref|XP_010473926.1| PREDICTED: uncharacterized protein LOC104753360 [Camelina sativa]
Length = 811
Score = 102 bits (255), Expect(2) = 4e-21
Identities = 52/139 (37%), Positives = 82/139 (58%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
G+ +LQ+ F ++E+ +L G K H LS AGR TL +++L+ IPV+ ++T +P
Sbjct: 558 GMPVLQKRLNKETFGEVLERVSSRLAGWKSHTLSLAGRLTLTKALLSSIPVHSMSTIMLP 617
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
+ L +I R F W + RK + + W+ +PK GG+GI D+N+AL+ K+
Sbjct: 618 KATLASLDKISRTFLWGGTGE-RRKQNLVSWKKVCMPKGDGGLGIRASKDMNKALIAKVG 676
Query: 361 QRFLHDKDTLWVRILHAKY 417
R LHDK +LW R+L +KY
Sbjct: 677 WRLLHDKQSLWARVLRSKY 695
Score = 25.8 bits (55), Expect(2) = 4e-21
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 467 STWMAILESRKELG-KGCN*MVGNGQDILIFNDPWIPFIP 583
STW + +E+ KG N ++G+GQ + + D W+ P
Sbjct: 706 STWRSTGTGLREVVCKGQNWVLGDGQRVKFWTDRWLSHSP 745
>ref|XP_013705040.1| PREDICTED: uncharacterized protein LOC106408899 [Brassica napus]
Length = 962
Score = 95.5 bits (236), Expect(2) = 5e-21
Identities = 48/145 (33%), Positives = 82/145 (56%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
G+ + +G+K+ FS+L E K++G LS G+ L+++V +PV+ ++ IP
Sbjct: 341 GLPEVLKGSKIKTFSYLKEFMSKKVSGWHARTLSQGGKEVLLKAVGTALPVHAMSVYKIP 400
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
+I+ L ++ FWW + + RK+H++ W+ LPKE GGMG L NQAL+ +
Sbjct: 401 KMVISSLHSVMASFWWSNVE-YKRKIHWMSWDKLCLPKEIGGMGFKDLECFNQALLARQG 459
Query: 361 QRFLHDKDTLWVRILHAKYLRNQAF 435
R + +D+L ++L KY N +F
Sbjct: 460 WRIIQFEDSLLAQVLKGKYFENDSF 484
Score = 32.7 bits (73), Expect(2) = 5e-21
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWI 571
W +++ R+ L KG ++G+G+ + ++++PWI
Sbjct: 497 WRSLMYGRELLKKGLKHLIGDGRSVKVWSEPWI 529
>ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 1235
Score = 107 bits (267), Expect = 5e-21
Identities = 58/139 (41%), Positives = 82/139 (58%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
G+ +LQ+ F ++EK KL G KR LS AGR TL +SV++ IPV+ ++T A+P
Sbjct: 615 GMPVLQKKINKETFGEVVEKVSSKLAGWKRKFLSLAGRITLTKSVISSIPVHTMSTIALP 674
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
+ + L +I R F W + NRK H + WE PK +GG+GI ++N AL+ KL
Sbjct: 675 ASTLGQLDKIARSFIWGSSEG-NRKQHLIAWEKICTPKREGGLGIRKAKEMNVALLGKLG 733
Query: 361 QRFLHDKDTLWVRILHAKY 417
R L+ D LWVRIL K+
Sbjct: 734 WRLLNTHDALWVRILQKKF 752
>ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103851737
[Brassica rapa]
Length = 1638
Score = 107 bits (267), Expect = 5e-21
Identities = 59/139 (42%), Positives = 83/139 (59%)
Frame = +1
Query: 1 GVKILQQGNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIP 180
G+ +LQ+ F +IEK KL G KR LS AGR TL +SVL+ +PV+ ++T A+P
Sbjct: 1178 GMPVLQKRINKETFGAVIEKVSSKLAGWKRRFLSLAGRITLTKSVLSSVPVHTMSTIALP 1237
Query: 181 NTIINMLTQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLA 360
++ +N L +I R F W D RK H + WE PK +GG+GI ++N AL+ KL
Sbjct: 1238 SSTLNQLDKIARAFIWGSIDG-TRKQHLVSWEKICKPKREGGLGIRLAKEMNVALLAKLG 1296
Query: 361 QRFLHDKDTLWVRILHAKY 417
R L+ +D LWV IL K+
Sbjct: 1297 WRMLNTEDGLWVNILCKKF 1315
>ref|XP_009139523.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 753
Score = 94.4 bits (233), Expect(2) = 6e-21
Identities = 50/146 (34%), Positives = 82/146 (56%)
Frame = +1
Query: 22 GNKVSNFSFLIEKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIPNTIINML 201
G+KV FS+L EK +++G LS AG+ +I++V + +PV ++ IP T+I L
Sbjct: 134 GSKVKLFSYLKEKMGRRISGWHARTLSQAGKEVMIKAVASALPVSAMSVFKIPKTVITSL 193
Query: 202 TQIIRDFWWRHDDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLAQRFLHDK 381
+ + +FWW + RK+H++ WE LPK+ GGMG L N+AL+ K A R ++ +
Sbjct: 194 SSALANFWWSAVEH-KRKIHWISWEKMCLPKDLGGMGFKDLESFNKALLAKQAWRLINLE 252
Query: 382 DTLWVRILHAKYLRNQAFWEIKKPKK 459
L ++L KY F + + K+
Sbjct: 253 SCLMSQVLKGKYFEGTCFVKAQLGKR 278
Score = 33.5 bits (75), Expect(2) = 6e-21
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWI 571
W ++LE + L +G VGNG + ++ DPW+
Sbjct: 283 WRSVLEGKDLLVQGLKVAVGNGSSLKVWTDPWL 315
>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
Length = 1848
Score = 106 bits (264), Expect(2) = 8e-21
Identities = 51/135 (37%), Positives = 87/135 (64%)
Frame = +1
Query: 55 EKFIGKLTG*KRHNLSYAGRTTLIQSVLALIPVYYITTSAIPNTIINMLTQIIRDFWWRH 234
E+F +LT KR LS GR TLI+S L+ +P+YY++ +P+++ + L QI RDF W
Sbjct: 1408 ERFRKRLTMWKRQYLSKGGRATLIRSTLSNLPIYYMSVLRLPSSVRSRLEQIQRDFLWG- 1466
Query: 235 DDKVNRKMHFLKWEWFNLPKEKGGMGILCLSDLNQALMKKLAQRFLHDKDTLWVRILHAK 414
+ RK H ++W+ L K+KGG+GI CLS+LN+AL+ K R+ ++++ LW +++ K
Sbjct: 1467 GGSLERKPHLVRWKVVCLSKKKGGLGIKCLSNLNKALLSKWNWRYANEREALWNQVIRGK 1526
Query: 415 YLRNQAFWEIKKPKK 459
Y ++ W ++ ++
Sbjct: 1527 YGEDRGGWSTREVRE 1541
Score = 21.2 bits (43), Expect(2) = 8e-21
Identities = 11/42 (26%), Positives = 17/42 (40%)
Frame = +2
Query: 473 WMAILESRKELGKGCN*MVGNGQDILIFNDPWIPFIPRGNPF 598
W I +G + VGNG+ + + D W P + F
Sbjct: 1548 WKGIRMDWDLVGARISFSVGNGRRVSFWRDRWCGXAPLCDSF 1589