BLASTX nr result

ID: Papaver31_contig00056777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00056777
         (613 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010253725.1| PREDICTED: exosome complex component MTR3 is...    66   2e-08
ref|XP_010253724.1| PREDICTED: exosome complex component MTR3 is...    66   2e-08
ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [V...    57   8e-06

>ref|XP_010253725.1| PREDICTED: exosome complex component MTR3 isoform X2 [Nelumbo
           nucifera]
          Length = 204

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 613 APTTYSPSPSNKKQQSIFKDVDWVRPDGCRFHQYRP 506
           APTTYSPSP+ KK+Q IFKDVDW+RPDG  FHQ RP
Sbjct: 8   APTTYSPSPTQKKRQPIFKDVDWIRPDGRGFHQCRP 43


>ref|XP_010253724.1| PREDICTED: exosome complex component MTR3 isoform X1 [Nelumbo
           nucifera]
          Length = 254

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 613 APTTYSPSPSNKKQQSIFKDVDWVRPDGCRFHQYRP 506
           APTTYSPSP+ KK+Q IFKDVDW+RPDG  FHQ RP
Sbjct: 8   APTTYSPSPTQKKRQPIFKDVDWIRPDGRGFHQCRP 43


>ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [Vitis vinifera]
           gi|147834996|emb|CAN61380.1| hypothetical protein
           VITISV_037546 [Vitis vinifera]
           gi|297746275|emb|CBI16331.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -1

Query: 610 PTTYSPSPSNKKQQSIFKDVDWVRPDGCRFHQYRP 506
           P+TYSPSP+ K ++ IF+DVDWVRPDG  FHQ RP
Sbjct: 9   PSTYSPSPAPKTKRPIFQDVDWVRPDGRGFHQCRP 43


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