BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00056462
         (489 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD89878.1| RNA polymerase II, second largest subunit [Doron...    92   5e-21
emb|CAD89597.1| RNA polymerase II, second largest subunit [Senec...    92   5e-21
dbj|BAG72327.1| RNA polymerase II second largest subunit [Linder...    94   1e-20
ref|NP_001289519.1| DNA-directed RNA polymerase II subunit RPB2 ...    93   2e-20
gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschsch...    94   2e-20
gb|AAS86824.1| RNA polymerase II second largest subunit, partial...    94   2e-20
dbj|BAG72326.1| RNA polymerase II second largest subunit [Linder...    93   2e-20
gb|AAY89344.1| RNA polymerase II second largest subunit [Petunia...    93   3e-20
gb|AAW22926.1| RNA polymerase II second largest subunit, partial...    94   3e-20
dbj|BAG72360.1| RNA polymerase II second largest subunit [Litsea...    94   3e-20
dbj|BAG72391.1| RNA polymerase II second largest subunit [Machil...    94   3e-20
dbj|BAG72386.1| RNA polymerase II second largest subunit [Litsea...    94   3e-20
dbj|BAG72382.1| RNA polymerase II second largest subunit [Litsea...    94   3e-20
dbj|BAG72367.1| RNA polymerase II second largest subunit [Litsea...    94   3e-20
dbj|BAG72364.1| RNA polymerase II second largest subunit [Litsea...    94   3e-20
dbj|BAG72345.1| RNA polymerase II second largest subunit [Litsea...    94   3e-20
dbj|BAG72332.1| RNA polymerase II second largest subunit [Linder...    94   3e-20
dbj|BAG72330.1| RNA polymerase II second largest subunit [Linder...    94   3e-20
dbj|BAG72328.1| RNA polymerase II second largest subunit [Linder...    94   3e-20
dbj|BAG72311.1| RNA polymerase II second largest subunit [Actino...    94   3e-20

>emb|CAD89878.1| RNA polymerase II, second largest subunit [Doronicum orientale]
          Length = 326

 Score = 92.4 bits (228), Expect(2) = 5e-21
 Identities = 51/81 (62%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           +RSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 197 VRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLI 256

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 257 ECIMGKVAAHMGKEGDATPFT 277



 Score = 35.4 bits (80), Expect(2) = 5e-21
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP AQDDA QG A       ++  +RH+E+G
Sbjct: 138 EDVIIGKTTPIAQDDAAQGQASRYTRRDHSTSLRHSETG 176


>emb|CAD89597.1| RNA polymerase II, second largest subunit [Senecio vulgaris]
          Length = 325

 Score = 92.4 bits (228), Expect(2) = 5e-21
 Identities = 51/81 (62%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           +RSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 195 VRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLI 254

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 255 ECIMGKVAAHMGKEGDATPFT 275



 Score = 35.4 bits (80), Expect(2) = 5e-21
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP AQDDA QG A       ++  +RH+E+G
Sbjct: 136 EDVIIGKTTPIAQDDAAQGQASRYTRRDHSTSLRHSETG 174


>dbj|BAG72327.1| RNA polymerase II second largest subunit [Lindera erythrocarpa]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 1e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 32.7 bits (73), Expect(2) = 1e-20
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+A QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDEAQQGQTSRYTRRDHSTSLRHSESG 63


>ref|NP_001289519.1| DNA-directed RNA polymerase II subunit RPB2 [Nicotiana sylvestris]
            gi|68300799|gb|AAY89342.1| RNA polymerase II second
            largest subunit [Nicotiana sylvestris]
          Length = 1203

 Score = 92.8 bits (229), Expect(2) = 2e-20
 Identities = 50/81 (61%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274  MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
            MRSVRI   GDKF+SRHG K T+GMT TQE +P       P  +     IP  +TIGQL+
Sbjct: 942  MRSVRIPQIGDKFSSRHGQKGTIGMTYTQEDMPWNIEGITPDIIVNPHAIPSRMTIGQLV 1001

Query: 100  ECIMGKVAAHVGKEGDATPFS 38
            ECIMGKVAAH+GKEGDATPF+
Sbjct: 1002 ECIMGKVAAHMGKEGDATPFT 1022



 Score = 32.7 bits (73), Expect(2) = 2e-20
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAH-QG*AFGQKGHGNNNIMRHNESG 372
           DDVI  K TP +QDDA  Q   + QK H  +  +RH+E+G
Sbjct: 884 DDVIIGKTTPISQDDAQGQPARYTQKDHSTS--LRHSETG 921


>gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschscholzia californica]
          Length = 951

 Score = 94.0 bits (232), Expect(2) = 2e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274  MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
            MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 824  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLI 883

Query: 100  ECIMGKVAAHVGKEGDATPFS 38
            ECIMGKVAAH+GKEGDATPF+
Sbjct: 884  ECIMGKVAAHMGKEGDATPFT 904



 Score = 31.6 bits (70), Expect(2) = 2e-20
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP AQDD+ QG A       ++  +RH+ESG
Sbjct: 766 EDVIIGKTTPIAQDDS-QGQASRYTRRDHSTSLRHSESG 803


>gb|AAS86824.1| RNA polymerase II second largest subunit, partial [Eschscholzia
           californica]
          Length = 559

 Score = 94.0 bits (232), Expect(2) = 2e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 432 MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLI 491

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 492 ECIMGKVAAHMGKEGDATPFT 512



 Score = 31.6 bits (70), Expect(2) = 2e-20
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP AQDD+ QG A       ++  +RH+ESG
Sbjct: 374 EDVIIGKTTPIAQDDS-QGQASRYTRRDHSTSLRHSESG 411


>dbj|BAG72326.1| RNA polymerase II second largest subunit [Lindera erythrocarpa]
          Length = 167

 Score = 92.8 bits (229), Expect(2) = 2e-20
 Identities = 51/81 (62%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+G+EGDATPF+
Sbjct: 144 ECIMGKVAAHMGREGDATPFT 164



 Score = 32.7 bits (73), Expect(2) = 2e-20
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+A QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDEAQQGQTSRYTRRDHSTSLRHSESG 63


>gb|AAY89344.1| RNA polymerase II second largest subunit [Petunia x hybrida]
          Length = 1203

 Score = 93.2 bits (230), Expect(2) = 3e-20
 Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274  MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
            MRSVRI   GDKF+SRHG K T+GMT TQE +P       P  +     IP  +TIGQL+
Sbjct: 942  MRSVRIPQIGDKFSSRHGQKGTIGMTYTQEDMPWTMEGITPDIIVNPHAIPSRMTIGQLV 1001

Query: 100  ECIMGKVAAHVGKEGDATPFS 38
            EC+MGKVAAH+GKEGDATPF+
Sbjct: 1002 ECVMGKVAAHMGKEGDATPFT 1022



 Score = 32.0 bits (71), Expect(2) = 3e-20
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAH-QG*AFGQKGHGNNNIMRHNESG 372
           DDVI  K TP +QDDA  Q   + +K H  +  +RH+E+G
Sbjct: 884 DDVIIGKTTPISQDDAQGQSARYTRKDHSTS--LRHSETG 921


>gb|AAW22926.1| RNA polymerase II second largest subunit, partial [Illicium
           anisatum]
          Length = 539

 Score = 93.6 bits (231), Expect(2) = 3e-20
 Identities = 51/81 (62%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVR+   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 403 MRSVRVPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLI 462

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 463 ECIMGKVAAHMGKEGDATPFT 483



 Score = 31.6 bits (70), Expect(2) = 3e-20
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP AQD+  Q   + ++ H  +  +RH+ESG
Sbjct: 346 EDVIIGKTTPIAQDEQGQASRYTRRDH--STCLRHSESG 382


>dbj|BAG72360.1| RNA polymerase II second largest subunit [Litsea ferruginea]
          Length = 170

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63


>dbj|BAG72391.1| RNA polymerase II second largest subunit [Machilus rimosa]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63


>dbj|BAG72386.1| RNA polymerase II second largest subunit [Litsea rubicunda]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63


>dbj|BAG72382.1| RNA polymerase II second largest subunit [Litsea resinosa]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63


>dbj|BAG72367.1| RNA polymerase II second largest subunit [Litsea globularia]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVSPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63


>dbj|BAG72364.1| RNA polymerase II second largest subunit [Litsea garciae]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63


>dbj|BAG72345.1| RNA polymerase II second largest subunit [Litsea caulocarpa]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQMGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63


>dbj|BAG72332.1| RNA polymerase II second largest subunit [Lindera glauca]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63


>dbj|BAG72330.1| RNA polymerase II second largest subunit [Lindera glauca]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63


>dbj|BAG72328.1| RNA polymerase II second largest subunit [Lindera glauca]
           gi|208609821|dbj|BAG72372.1| RNA polymerase II second
           largest subunit [Litsea grandis]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63


>dbj|BAG72311.1| RNA polymerase II second largest subunit [Actinodaphne macrophylla]
          Length = 167

 Score = 94.0 bits (232), Expect(2) = 3e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -3

Query: 274 MRSVRIYHTGDKFNSRHGHKRTVGMTCTQEAIP**KHH--PRHLCGSTYIPFPITIGQLI 101
           MRSVRI   GDKF+SRHG K TVGMT TQE +P       P  +     IP  +TIGQLI
Sbjct: 84  MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLI 143

Query: 100 ECIMGKVAAHVGKEGDATPFS 38
           ECIMGKVAAH+GKEGDATPF+
Sbjct: 144 ECIMGKVAAHMGKEGDATPFT 164



 Score = 31.2 bits (69), Expect(2) = 3e-20
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 488 DDVIY*KATPAAQDDAHQG*AFGQKGHGNNNIMRHNESG 372
           +DVI  K TP  QD+  QG         ++  +RH+ESG
Sbjct: 25  EDVIIGKTTPIGQDETQQGQTSRYTRRDHSTSLRHSESG 63