BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00056384
         (498 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007159032.1| hypothetical protein PHAVU_002G202800g [Phas...   209   8e-52
ref|XP_011458358.1| PREDICTED: pentatricopeptide repeat-containi...   208   1e-51
ref|XP_010241667.1| PREDICTED: pentatricopeptide repeat-containi...   206   7e-51
ref|XP_007199439.1| hypothetical protein PRUPE_ppa026671mg [Prun...   204   2e-50
ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...   204   2e-50
emb|CDP16561.1| unnamed protein product [Coffea canephora]            203   5e-50
ref|XP_008236131.1| PREDICTED: pentatricopeptide repeat-containi...   202   6e-50
emb|CBI37820.3| unnamed protein product [Vitis vinifera]              202   6e-50
ref|XP_007041730.1| Mitochondrial editing factor 9 isoform 1 [Th...   202   6e-50
ref|XP_010646505.1| PREDICTED: pentatricopeptide repeat-containi...   202   6e-50
emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]   202   6e-50
ref|XP_014490109.1| PREDICTED: pentatricopeptide repeat-containi...   202   1e-49
gb|KOM27811.1| hypothetical protein LR48_Vigan464s000800 [Vigna ...   202   1e-49
ref|XP_008358362.1| PREDICTED: pentatricopeptide repeat-containi...   202   1e-49
ref|XP_010926266.1| PREDICTED: pentatricopeptide repeat-containi...   200   3e-49
ref|XP_012572379.1| PREDICTED: pentatricopeptide repeat-containi...   199   9e-49
ref|XP_010683888.1| PREDICTED: pentatricopeptide repeat-containi...   198   1e-48
ref|XP_008782324.1| PREDICTED: pentatricopeptide repeat-containi...   198   1e-48
ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containi...   198   1e-48
ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containi...   198   1e-48

>ref|XP_007159032.1| hypothetical protein PHAVU_002G202800g [Phaseolus vulgaris]
           gi|561032447|gb|ESW31026.1| hypothetical protein
           PHAVU_002G202800g [Phaseolus vulgaris]
          Length = 640

 Score =  209 bits (531), Expect = 8e-52
 Identities = 99/165 (60%), Positives = 127/165 (76%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+KLF EMP+PD  SWNS+++G+AQNG+L LA+ FF+K P+K+LISWN+LI+GYE+N +
Sbjct: 317 EASKLFREMPSPDVLSWNSIVTGFAQNGNLNLAKDFFEKMPHKNLISWNTLIAGYEKNED 376

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y+ AVRL  Q+Q EGERPDKHT              +LG QIH LV K V+ D PINN+L
Sbjct: 377 YKGAVRLFSQMQLEGERPDKHTLSSVISVCTGLVDLYLGKQIHQLVTKTVLPDSPINNSL 436

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I DA +VFDE+ L +DV++WN++IGGYA +GLA EA
Sbjct: 437 ITMYSRCGAIVDASAVFDEIKLYKDVITWNAMIGGYASHGLAAEA 481



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E  K+F  MP  D  SWN++ISGYA+NG ++ A  FF+  P ++++S N++I+G+  NG+
Sbjct: 112 EGRKMFELMPQRDCVSWNTVISGYAKNGRMDQALKFFNAMPERNVVSSNAVITGFLLNGD 171

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQ---IHHLVIKLVIAD--VP 347
            + AV     +      P+  +               L M    +H         D  V 
Sbjct: 172 VDLAVGFFKTM------PEHDSASLCALISGLVRNGELDMAAGILHEFGSDDDRKDDLVH 225

Query: 348 INNALITMYSRCGVISDARSVFDEM------------ALKRDVVSWNSIIGGYAYNGLAV 491
             N LI  Y + G + +AR +FDE+              +R+V+SWNS++  Y   G  V
Sbjct: 226 AYNTLIAGYGQRGHVEEARRLFDEIPDDRGGGDKGQRRFRRNVISWNSMMMSYVKAGDIV 285

Query: 492 EA 497
            A
Sbjct: 286 SA 287



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 2/162 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYE--QN 176
           EA  LF  M + ++ +WNSMISGY    ++  AR  FD+ P + ++SWN ++SGY   + 
Sbjct: 47  EARALFDSMKHRNAVTWNSMISGYIHRREIAKARQLFDEMPQRDIVSWNLIVSGYFSCRG 106

Query: 177 GEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINN 356
             + E  R + +L  +                                      D    N
Sbjct: 107 SRFIEEGRKMFELMPQ-------------------------------------RDCVSWN 129

Query: 357 ALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
            +I+ Y++ G +  A   F+ M  +R+VVS N++I G+  NG
Sbjct: 130 TVISGYAKNGRMDQALKFFNAMP-ERNVVSSNAVITGFLLNG 170



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQ---NGDLELARSFFDKTPNKSLISWNSLISGYEQ 173
           +A +LF EMP  D  SWN ++SGY     +  +E  R  F+  P +  +SWN++ISGY +
Sbjct: 78  KARQLFDEMPQRDIVSWNLIVSGYFSCRGSRFIEEGRKMFELMPQRDCVSWNTVISGYAK 137

Query: 174 NGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPIN 353
           NG  ++A++  + +      P+++                + + +      +   D    
Sbjct: 138 NGRMDQALKFFNAM------PERNVVSSNAVITGFLLNGDVDLAVGFFK-TMPEHDSASL 190

Query: 354 NALITMYSRCGVISDARSVFDEMALKRD-----VVSWNSIIGGYAYNGLAVEA 497
            ALI+   R G +  A  +  E     D     V ++N++I GY   G   EA
Sbjct: 191 CALISGLVRNGELDMAAGILHEFGSDDDRKDDLVHAYNTLIAGYGQRGHVEEA 243



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 44/177 (24%), Positives = 87/177 (49%), Gaps = 19/177 (10%)
 Frame = +3

Query: 6   AAKLFHEMPNPDSQ------SWNSMISGYAQNGDLELARSFFDKTPN------------- 128
           AA + HE  + D +      ++N++I+GY Q G +E AR  FD+ P+             
Sbjct: 206 AAGILHEFGSDDDRKDDLVHAYNTLIAGYGQRGHVEEARRLFDEIPDDRGGGDKGQRRFR 265

Query: 129 KSLISWNSLISGYEQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQI 308
           +++ISWNS++  Y + G+   A  L  ++       ++ T              ++  + 
Sbjct: 266 RNVISWNSMMMSYVKAGDIVSARELFDRM------VERDTCSWNTVISGYVQISNMD-EA 318

Query: 309 HHLVIKLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYN 479
             L  ++   DV   N+++T +++ G ++ A+  F++M  K +++SWN++I GY  N
Sbjct: 319 SKLFREMPSPDVLSWNSIVTGFAQNGNLNLAKDFFEKMPHK-NLISWNTLIAGYEKN 374


>ref|XP_011458358.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764531234|ref|XP_011458359.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764531238|ref|XP_011458360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 671

 Score =  208 bits (529), Expect = 1e-51
 Identities = 98/165 (59%), Positives = 124/165 (75%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+KLF EMP PD+ SWNSMI GYAQ   L+LA  FFD+ P KSL+SWNS+I+GYE+N +
Sbjct: 344 EASKLFREMPTPDTLSWNSMILGYAQVSRLKLAHEFFDRMPQKSLVSWNSMIAGYEKNED 403

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           +  AV+L  Q+Q EGE+PD+HT              HLGMQIH LV K+VIAD+PINN+L
Sbjct: 404 FIGAVKLFSQMQLEGEKPDRHTLSSVLSVCTGLVDLHLGMQIHQLVTKIVIADLPINNSL 463

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I +A ++FDEM  ++DV+SWN++IGGYA +G A EA
Sbjct: 464 ITMYSRCGAIEEAHTIFDEMKREKDVISWNAMIGGYASHGFAAEA 508



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E   LF +MP  DS SWN+MISGYA+NG +  A   F+  P ++++SWN++++G+ QNG+
Sbjct: 139 EGRSLFDQMPTRDSVSWNTMISGYAKNGRMGEALRLFECMPERTVVSWNAMVTGFLQNGD 198

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIAD------V 344
              AV    ++      P +                 L  +   +V++           V
Sbjct: 199 VGSAVEFFERM------PQRDGASLCALVSGMVHNGELD-EAARIVVQCGNRGEGGEDLV 251

Query: 345 PINNALITMYSRCGVISDARSVFDEMAL------------KRDVVSWNSIIGGYAYNGLA 488
              N LI  Y + G + +A   FD++ +            +R+VVSWNS+I  Y   G  
Sbjct: 252 SAYNTLIAGYGQRGRVEEAWQFFDQIPICQEKVGGEGRRFERNVVSWNSMIMCYVKAGDV 311

Query: 489 VEA 497
           V A
Sbjct: 312 VSA 314



 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGD---LELARSFFDKTPNKSLISWNSLISGYEQ 173
           +A KLF EMP  D  SWN MISGY        +E  RS FD+ P +  +SWN++ISGY +
Sbjct: 105 KARKLFDEMPERDVVSWNVMISGYVSCRGARYIEEGRSLFDQMPTRDSVSWNTMISGYAK 164

Query: 174 NGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPIN 353
           NG   EA+RL   +      P++                                 V   
Sbjct: 165 NGRMGEALRLFECM------PER--------------------------------TVVSW 186

Query: 354 NALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           NA++T + + G +  A   F+ M  +RD  S  +++ G  +NG   EA
Sbjct: 187 NAMVTGFLQNGDVGSAVEFFERMP-QRDGASLCALVSGMVHNGELDEA 233



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYE--QN 176
           +A ++F  M + +  +WNSMISGY +  ++  AR  FD+ P + ++SWN +ISGY   + 
Sbjct: 74  QAREVFDNMKHRNIVTWNSMISGYVKRREIAKARKLFDEMPERDVVSWNVMISGYVSCRG 133

Query: 177 GEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINN 356
             Y E  R L                                       ++   D    N
Sbjct: 134 ARYIEEGRSLFD-------------------------------------QMPTRDSVSWN 156

Query: 357 ALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
            +I+ Y++ G + +A  +F+ M  +R VVSWN+++ G+  NG
Sbjct: 157 TMISGYAKNGRMGEALRLFECMP-ERTVVSWNAMVTGFLQNG 197


>ref|XP_010241667.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Nelumbo nucifera]
           gi|720079451|ref|XP_010241668.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Nelumbo nucifera]
          Length = 705

 Score =  206 bits (523), Expect = 7e-51
 Identities = 95/165 (57%), Positives = 127/165 (76%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+ LF  M +PD++SWN MISG+AQ G++ELA  FF++ P KSL+SWNS+I+G+EQ+G+
Sbjct: 330 EASDLFLRMQDPDTRSWNLMISGHAQEGNMELACYFFNRMPQKSLVSWNSMIAGFEQSGD 389

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           YEEA++L  Q+  EGE PDKHT              + GMQIH  VIK V+AD+PINN+L
Sbjct: 390 YEEAIQLFLQMLAEGETPDKHTLSSLLSVCAGLTALYQGMQIHQQVIKTVVADIPINNSL 449

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           +TMYSRCG I +A+++FDEM ++RDVVSWN++IGGYAY+G A EA
Sbjct: 450 VTMYSRCGAIVEAQAIFDEMKMQRDVVSWNAMIGGYAYHGFAKEA 494



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E   LF  MP  D  SWN++ISGYA+NG ++ A   F   P ++++S N++I+G  QNG+
Sbjct: 126 EGRSLFDRMPERDLVSWNTVISGYARNGRIQDALYLFHIMPERNIVSRNAMITGLLQNGD 185

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLV-IKLVIAD----VP 347
              A+ L  ++      P++ +               L      L+ ++    D    + 
Sbjct: 186 VSGAIELFERM------PERDSTSLSALVSGLIQNDQLDKAARILLDVEKAFEDRGDLIH 239

Query: 348 INNALITMYSRCGVISDARSVFDEM-----------ALKRDVVSWNSIIGGYAYNGLAVE 494
             N LI  Y + G++ +AR +FD++             KR+VVSWNS+I  Y   G  V 
Sbjct: 240 AYNTLIAGYGQRGMVDEARRLFDQIPSYTNFSKEGQQFKRNVVSWNSMIMCYVKVGDVVS 299

Query: 495 A 497
           A
Sbjct: 300 A 300



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
 Frame = +3

Query: 39  DSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGEYEEAVRLLHQLQ 218
           D +  N  I    +NG +  ARS FD T +++ ++WNS+ISGY QN E  +A +L  Q+ 
Sbjct: 42  DFRRLNKAIYHLIRNGRINEARSVFDATQHRNAVTWNSMISGYIQNREIAKARKLFDQMP 101

Query: 219 GEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNALITMYSRC---GV 389
                                                   D+   N +I+ Y  C    +
Sbjct: 102 NR--------------------------------------DIVSWNLMISGYFSCPGLRL 123

Query: 390 ISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           I + RS+FD M  +RD+VSWN++I GYA NG   +A
Sbjct: 124 IEEGRSLFDRMP-ERDLVSWNTVISGYARNGRIQDA 158



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA  +F    + ++ +WNSMISGY QN ++  AR  FD+ PN+ ++SWN +ISGY     
Sbjct: 61  EARSVFDATQHRNAVTWNSMISGYIQNREIAKARKLFDQMPNRDIVSWNLMISGYFSC-- 118

Query: 183 YEEAVRLLHQLQGEGER-PDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNA 359
               +RL+ + +   +R P++                                D+   N 
Sbjct: 119 --PGLRLIEEGRSLFDRMPER--------------------------------DLVSWNT 144

Query: 360 LITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
           +I+ Y+R G I DA  +F  M  +R++VS N++I G   NG
Sbjct: 145 VISGYARNGRIQDALYLFHIMP-ERNIVSRNAMITGLLQNG 184


>ref|XP_007199439.1| hypothetical protein PRUPE_ppa026671mg [Prunus persica]
           gi|462394839|gb|EMJ00638.1| hypothetical protein
           PRUPE_ppa026671mg [Prunus persica]
          Length = 611

 Score =  204 bits (520), Expect = 2e-50
 Identities = 94/165 (56%), Positives = 126/165 (76%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           +A+ LF +MPNPD+ SWNS+I GY+Q G LELA  FF+K P K+L+SWNS+I+GYE+N +
Sbjct: 284 QASSLFSKMPNPDALSWNSLILGYSQVGCLELAHDFFEKMPQKNLVSWNSMIAGYEKNED 343

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           +  AV+L  ++Q EGE+PD+HT              HLGMQ+H +V K VIADVP+NN+L
Sbjct: 344 FVGAVKLFARMQLEGEKPDRHTLSSLLSVSTGLVDLHLGMQVHQMVTKTVIADVPLNNSL 403

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I +A+++FDEM L++DVVSWN++IGGYA +G A EA
Sbjct: 404 ITMYSRCGAIKEAQTIFDEMKLQKDVVSWNAMIGGYASHGFAAEA 448



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA +LF+ MPN    SWN+MI+G+ QNGD+  A  FF++ P +   S ++L+SG  QNGE
Sbjct: 110 EALQLFNRMPNQSVVSWNAMITGFLQNGDVVHAIEFFERIPERDRASLSALVSGLIQNGE 169

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGM---------QIHHLVIK--- 326
            +EA R+L +    G R D                   G          QI  L  K   
Sbjct: 170 LDEAARILLEC---GNRDDGREGLVHAYNTLIAGYGQRGRVEEARKLFDQIPFLHQKGKE 226

Query: 327 ---LVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAY 476
                  +V   N +I  Y + G I  AR +FD+M  +RD  SWN++I GY +
Sbjct: 227 GNRRFERNVVSWNTMIMCYVKTGNIVSARELFDQMR-ERDTFSWNTMISGYVH 278



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E   LF +MP  D  SWN+MISGYA+N  +  A   F++ PN+S++SWN++I+G+ QNG+
Sbjct: 79  EGRSLFDQMPVRDCVSWNTMISGYAKNQRMTEALQLFNRMPNQSVVSWNAMITGFLQNGD 138

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIAD------V 344
              A+    ++      P++                 L  +   ++++    D      V
Sbjct: 139 VVHAIEFFERI------PERDRASLSALVSGLIQNGELD-EAARILLECGNRDDGREGLV 191

Query: 345 PINNALITMYSRCGVISDARSVFDEM------------ALKRDVVSWNSIIGGYAYNGLA 488
              N LI  Y + G + +AR +FD++              +R+VVSWN++I  Y   G  
Sbjct: 192 HAYNTLIAGYGQRGRVEEARKLFDQIPFLHQKGKEGNRRFERNVVSWNTMIMCYVKTGNI 251

Query: 489 VEA 497
           V A
Sbjct: 252 VSA 254



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQ-NGD--LELARSFFDKTPNKSLISWNSLISGYEQ 173
           +A KLF EMP  D  SWN MISGY    GD  +E  RS FD+ P +  +SWN++ISGY +
Sbjct: 45  KARKLFDEMPERDVVSWNLMISGYISCRGDRYIEEGRSLFDQMPVRDCVSWNTMISGYAK 104

Query: 174 NGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVI--KLVIADVP 347
           N    EA++L +++  +                        G  +H +    ++   D  
Sbjct: 105 NQRMTEALQLFNRMPNQS---------VVSWNAMITGFLQNGDVVHAIEFFERIPERDRA 155

Query: 348 INNALITMYSRCGVISDARSVFDEMALKRD-----VVSWNSIIGGYAYNGLAVEA 497
             +AL++   + G + +A  +  E   + D     V ++N++I GY   G   EA
Sbjct: 156 SLSALVSGLIQNGELDEAARILLECGNRDDGREGLVHAYNTLIAGYGQRGRVEEA 210



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDS------QSWNSMISGYAQNGDLELARSFFDKTP------------- 125
           EAA++  E  N D        ++N++I+GY Q G +E AR  FD+ P             
Sbjct: 172 EAARILLECGNRDDGREGLVHAYNTLIAGYGQRGRVEEARKLFDQIPFLHQKGKEGNRRF 231

Query: 126 NKSLISWNSLISGYEQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQ 305
            ++++SWN++I  Y + G    A  L  Q++      ++ T               +  Q
Sbjct: 232 ERNVVSWNTMIMCYVKTGNIVSARELFDQMR------ERDTFSWNTMISGYVHASDM-EQ 284

Query: 306 IHHLVIKLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYN 479
              L  K+   D    N+LI  YS+ G +  A   F++M  ++++VSWNS+I GY  N
Sbjct: 285 ASSLFSKMPNPDALSWNSLILGYSQVGCLELAHDFFEKMP-QKNLVSWNSMIAGYEKN 341


>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score =  204 bits (519), Expect = 2e-50
 Identities = 96/165 (58%), Positives = 124/165 (75%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+ LFH+MP+PD+ SWN MISGYAQ+G LELA  FF++ P K+L+SWNS+I+GYE+NG+
Sbjct: 335 EASNLFHKMPSPDTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGD 394

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y  A+ L  Q+Q EGE+ D+HT               LGMQIH LV K VI DVP+NNAL
Sbjct: 395 YIGAINLFIQMQVEGEKSDRHTLSSLLSVSSGIVDLQLGMQIHQLVSKTVIPDVPLNNAL 454

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I +AR++F EM L+++V+SWN++IGGYA +G A EA
Sbjct: 455 ITMYSRCGAIFEARTIFYEMKLQKEVISWNAMIGGYASHGYATEA 499



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 45/210 (21%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQ---NGDLELARSFFDKTPNKSLISWNSLISGYEQ 173
           +A KLF EMP  D  SWN +ISGY        +E  R+ FDK P +  +SWN++ISGY +
Sbjct: 96  KARKLFDEMPERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAK 155

Query: 174 NGEYEEAVRLLH------------QLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHL 317
           NG  +EA+ L +             + G  +  D                  L   +  L
Sbjct: 156 NGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGL 215

Query: 318 V-------IKLVIADVPIN-----------NALITMYSRCGVISDARSVFDEM------- 422
           +        + ++ D   N           N LI  Y + G + +A+++FD++       
Sbjct: 216 IQNSELDQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQG 275

Query: 423 -----ALKRDVVSWNSIIGGYAYNGLAVEA 497
                  +R+VVSWN++I  Y   G  + A
Sbjct: 276 KGRTGRFERNVVSWNTMIMCYVKAGDVISA 305



 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 13/173 (7%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQ-------------SWNSMISGYAQNGDLELARSFFDKTPNKSLIS 143
           EA  LF ++P  + Q             SWN+MI  Y + GD+  AR  FD+ P++   S
Sbjct: 260 EAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFS 319

Query: 144 WNSLISGYEQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVI 323
           WN++ISGY    + EEA  L H++      PD  +                         
Sbjct: 320 WNTMISGYVHVLDMEEASNLFHKMPS----PDTLSW------------------------ 351

Query: 324 KLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
                     N +I+ Y++ G +  A   F+ M  ++++VSWNS+I GY  NG
Sbjct: 352 ----------NLMISGYAQSGSLELAHDFFERMP-QKNLVSWNSVIAGYEKNG 393



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQ-NG 179
           EA  LF ++   ++ +WNSMISGY + G++  AR  FD+ P + ++SWN +ISGY    G
Sbjct: 65  EARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMPERDVVSWNLIISGYVSCRG 124

Query: 180 E--YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPIN 353
           +   EE   L  ++      P++                                     
Sbjct: 125 KRFIEEGRNLFDKM------PERCCVSW-------------------------------- 146

Query: 354 NALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           N +I+ Y++ G + +A  +F+ M  +++ VSWN+++ G+  NG  V A
Sbjct: 147 NTMISGYAKNGRMDEALGLFNTMP-EKNSVSWNAMVSGFLQNGDVVRA 193


>emb|CDP16561.1| unnamed protein product [Coffea canephora]
          Length = 669

 Score =  203 bits (516), Expect = 5e-50
 Identities = 89/165 (53%), Positives = 129/165 (78%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA++LF EMP PD+ SWNSMISG++++G+LELAR+FF++ P K+ ISWN++I+G E+N +
Sbjct: 343 EASRLFSEMPRPDALSWNSMISGFSESGNLELARNFFERMPEKNRISWNAIIAGSEKNAD 402

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y+ A++L  ++QG GE+PD+HT               LGMQIH LV K+V+ D+P+NN+L
Sbjct: 403 YDGAIKLFIEMQGAGEKPDRHTLSSLLSICAESVAVDLGMQIHQLVTKIVVPDIPLNNSL 462

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMY+RCG I +AR++FDEM  ++DV+SWN++IGGYA +G A+EA
Sbjct: 463 ITMYARCGAIFEARTIFDEMQFEKDVISWNAMIGGYASHGYALEA 507



 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA  LF +MP  D  SWN+MISGYA+NG ++ A   F   P ++++SWN+++SG  QNG+
Sbjct: 137 EAKYLFDQMPERDVVSWNTMISGYAKNGRIDEAMRLFMCMPKRNVVSWNAIVSGLLQNGD 196

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIAD------V 344
            + AV    ++      PD+                 L     H++ K    D      +
Sbjct: 197 MKRAVEFFERM------PDRDAASLSVLVSGLIQNEELDAAA-HVLFKYGTRDSGSEDYL 249

Query: 345 PINNALITMYSRCGVISDARSVFDEMAL-------------KRDVVSWNSIIGGYAYNGL 485
              N LI  Y + G ++DAR +FD++ +             ++++VSWNS+I  Y   G 
Sbjct: 250 QAYNVLIAGYGQKGRVNDARKLFDQIPIYAADDNRNGVKRFEKNLVSWNSMIMCYVKTGD 309

Query: 486 AVEA 497
            + A
Sbjct: 310 IISA 313



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 44/144 (30%), Positives = 65/144 (45%)
 Frame = +3

Query: 48  SWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGEYEEAVRLLHQLQGEG 227
           SWNSMI  Y + GD+  AR  FDK   +  +SWN++ISGY      EEA RL  ++    
Sbjct: 296 SWNSMIMCYVKTGDIISARELFDKMIERDSVSWNTMISGYVHVRNMEEASRLFSEM---- 351

Query: 228 ERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNALITMYSRCGVISDARS 407
            RPD  +                                   N++I+ +S  G +  AR+
Sbjct: 352 PRPDALSW----------------------------------NSMISGFSESGNLELARN 377

Query: 408 VFDEMALKRDVVSWNSIIGGYAYN 479
            F+ M  +++ +SWN+II G   N
Sbjct: 378 FFERMP-EKNRISWNAIIAGSEKN 400



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 44/148 (29%), Positives = 72/148 (48%)
 Frame = +3

Query: 39  DSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGEYEEAVRLLHQLQ 218
           D Q  N  I+   ++G ++ AR  FD    ++ I+WNS++SGY    E  +A +L  ++ 
Sbjct: 53  DLQIMNKNITRLIRSGRIQEARVLFDGLRLRNTITWNSMMSGYVHRREIAKARKLFDEMP 112

Query: 219 GEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNALITMYSRCGVISD 398
              ER D  +                  +  +L  ++   DV   N +I+ Y++ G I +
Sbjct: 113 ---ER-DVVSWNLIISGYMGCRGSRYMQEAKYLFDQMPERDVVSWNTMISGYAKNGRIDE 168

Query: 399 ARSVFDEMALKRDVVSWNSIIGGYAYNG 482
           A  +F  M  KR+VVSWN+I+ G   NG
Sbjct: 169 AMRLFMCMP-KRNVVSWNAIVSGLLQNG 195


>ref|XP_008236131.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Prunus mume]
          Length = 704

 Score =  202 bits (515), Expect = 6e-50
 Identities = 93/165 (56%), Positives = 125/165 (75%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+ LF +MPNPD+ SWNS+I GY+Q G LELA  FF+K P K+L+SWNS+I+GYE+N +
Sbjct: 377 EASSLFSKMPNPDALSWNSLILGYSQVGCLELAHDFFEKMPQKNLVSWNSMIAGYEKNED 436

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           +  AV+L  ++Q EGE+PD+HT              HLGMQ+H +V K VIADVP+NN+L
Sbjct: 437 FVGAVKLFARMQLEGEKPDRHTLSSVLSVSTGLVDLHLGMQVHQMVTKTVIADVPLNNSL 496

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I +A ++FD+M L++DV+SWN++IGGYA +G A EA
Sbjct: 497 ITMYSRCGEIKEAHTIFDKMKLQKDVISWNAMIGGYASHGFAAEA 541



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA +LF+ MPN    SWN+MI+G+ QNGD+  A  FF++ P +   S ++L+SG  QNGE
Sbjct: 203 EALQLFNRMPNQSVVSWNAMITGFLQNGDVVHAIEFFERMPERDRASLSALVSGLIQNGE 262

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGM--QIHHLVIKLVIA------ 338
            +EA R+L +    G R D                   G   +   L  ++ +A      
Sbjct: 263 LDEAARILLEC---GNRDDGREDLVHAYNTLIAGYGQRGRVEEARKLFDQIPLAHEKGKE 319

Query: 339 -------DVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAY 476
                  +V   N +I  Y + G I  AR +FD+M  +RD  SWN++I GY +
Sbjct: 320 GNRRFERNVVSWNIMIMCYVKAGNIVSARELFDQMR-ERDTFSWNTMISGYVH 371



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E   LF +MP  D  SWN+MISGYA+N  +  A   F++ PN+S++SWN++I+G+ QNG+
Sbjct: 172 EGRSLFDQMPVRDCVSWNTMISGYAKNQRMTEALQLFNRMPNQSVVSWNAMITGFLQNGD 231

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIAD------V 344
              A+    ++      P++                 L  +   ++++    D      V
Sbjct: 232 VVHAIEFFERM------PERDRASLSALVSGLIQNGELD-EAARILLECGNRDDGREDLV 284

Query: 345 PINNALITMYSRCGVISDARSVFDEMAL------------KRDVVSWNSIIGGYAYNGLA 488
              N LI  Y + G + +AR +FD++ L            +R+VVSWN +I  Y   G  
Sbjct: 285 HAYNTLIAGYGQRGRVEEARKLFDQIPLAHEKGKEGNRRFERNVVSWNIMIMCYVKAGNI 344

Query: 489 VEA 497
           V A
Sbjct: 345 VSA 347



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQ-NGD--LELARSFFDKTPNKSLISWNSLISGYEQ 173
           +A KLF EMP  D  SWN MISGY    GD  +E  RS FD+ P +  +SWN++ISGY +
Sbjct: 138 KARKLFDEMPERDVVSWNLMISGYISCRGDRYIEEGRSLFDQMPVRDCVSWNTMISGYAK 197

Query: 174 NGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPIN 353
           N    EA++L +++  +                                       V   
Sbjct: 198 NQRMTEALQLFNRMPNQ--------------------------------------SVVSW 219

Query: 354 NALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           NA+IT + + G +  A   F+ M  +RD  S ++++ G   NG   EA
Sbjct: 220 NAMITGFLQNGDVVHAIEFFERMP-ERDRASLSALVSGLIQNGELDEA 266



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDS------QSWNSMISGYAQNGDLELARSFFDKTP------------- 125
           EAA++  E  N D        ++N++I+GY Q G +E AR  FD+ P             
Sbjct: 265 EAARILLECGNRDDGREDLVHAYNTLIAGYGQRGRVEEARKLFDQIPLAHEKGKEGNRRF 324

Query: 126 NKSLISWNSLISGYEQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQ 305
            ++++SWN +I  Y + G    A  L  Q++      ++ T               +  +
Sbjct: 325 ERNVVSWNIMIMCYVKAGNIVSARELFDQMR------ERDTFSWNTMISGYVHALDM-EE 377

Query: 306 IHHLVIKLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYN 479
              L  K+   D    N+LI  YS+ G +  A   F++M  ++++VSWNS+I GY  N
Sbjct: 378 ASSLFSKMPNPDALSWNSLILGYSQVGCLELAHDFFEKMP-QKNLVSWNSMIAGYEKN 434


>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  202 bits (515), Expect = 6e-50
 Identities = 92/165 (55%), Positives = 123/165 (74%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA  LF EMPNPD+ +WNSMISG+AQ G+LELAR+ F   P K+L+SWNS+I+GYE NG+
Sbjct: 176 EAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGD 235

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y+ A  L  Q+  +GE+PD+HT              HLGMQIH  + K VI D+PINN+L
Sbjct: 236 YKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSL 295

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I +AR++FDE+ L+++V+SWN++IGGYA++G A +A
Sbjct: 296 ITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADA 340



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA +LF  M   +  SWN+M++G+ QNGD+E A  FF + P +   S ++L++G  QNGE
Sbjct: 3   EALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGE 62

Query: 183 YEEAVRLLHQLQGEGERPDK----HTXXXXXXXXXXXXXXHLGMQIHHLVI--------- 323
            +EA R+L  L    +  DK    H                   Q+   +          
Sbjct: 63  LDEAKRIL--LTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDG 120

Query: 324 KLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGY 470
                +V   N++I  Y +   I  AR +FD+M  +RD +SWN++I GY
Sbjct: 121 GRFERNVVSWNSMIMCYVKARDIFSARVLFDQMK-ERDTISWNTMISGY 168


>ref|XP_007041730.1| Mitochondrial editing factor 9 isoform 1 [Theobroma cacao]
           gi|590683987|ref|XP_007041731.1| Mitochondrial editing
           factor 9 isoform 1 [Theobroma cacao]
           gi|508705665|gb|EOX97561.1| Mitochondrial editing factor
           9 isoform 1 [Theobroma cacao]
           gi|508705666|gb|EOX97562.1| Mitochondrial editing factor
           9 isoform 1 [Theobroma cacao]
          Length = 657

 Score =  202 bits (515), Expect = 6e-50
 Identities = 95/165 (57%), Positives = 122/165 (73%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+ LF+ MP PDS SWNSMISG++Q G LELAR  F+K P K L+SWNS+I+ YE+N +
Sbjct: 330 EASNLFNTMPKPDSLSWNSMISGFSQLGRLELARDLFEKMPQKHLVSWNSIIAAYEKNED 389

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y+ A++L  Q+Q EGE+PD+HT              HLGMQIH LV K VI DVPI N+L
Sbjct: 390 YKGAIKLFIQMQAEGEKPDRHTFSSVLSVATGLVDLHLGMQIHQLVSKTVIPDVPIKNSL 449

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I ++R++FDEM   +DV+SWN++IGGYA +G A+EA
Sbjct: 450 ITMYSRCGAIIESRTIFDEMKSLKDVISWNAMIGGYASHGFAIEA 494



 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA +LF  MP  +  SWN+MI+G+ +NGD   A  +F++ P +   S ++ +SG  QNG+
Sbjct: 156 EAIRLFESMPERNVVSWNAMITGFLRNGDTVSATEYFERMPEQDSTSVSAFVSGLVQNGD 215

Query: 183 YEEAVRLLHQLQGEG------ERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKL----- 329
            +EA R+L +    G       +                    L  QI +  +++     
Sbjct: 216 LDEAARVLIECGNRGGWREGLVQACNTLIAGYGQKGRVDDARRLFDQIPYNCVQMEGRKA 275

Query: 330 -VIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGY 470
               +V   N++I  Y + G I  AR +FD+M ++RD +SWN++I GY
Sbjct: 276 EFERNVVSWNSMIMCYVKAGDIVSARELFDQM-VERDTISWNTMINGY 322



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA  +F +MP  D+ +WNSMISGY +  ++  AR  FD+ P + ++SWN +ISGY     
Sbjct: 60  EAKSVFDQMPQRDTVTWNSMISGYVKRREIAKARKLFDEMPKRDIVSWNLIISGYASCLG 119

Query: 183 Y---EEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPIN 353
           Y   EE  +L  Q+      P K                                D    
Sbjct: 120 YRFLEEGKKLFDQM------PRK--------------------------------DFVSW 141

Query: 354 NALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           N +I+ Y++ G + +A  +F+ M  +R+VVSWN++I G+  NG  V A
Sbjct: 142 NTMISGYAKNGRMDEAIRLFESMP-ERNVVSWNAMITGFLRNGDTVSA 188



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 52/168 (30%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQ---NGDLELARSFFDKTPNKSLISWNSLISGYEQ 173
           +A KLF EMP  D  SWN +ISGYA       LE  +  FD+ P K  +SWN++ISGY +
Sbjct: 91  KARKLFDEMPKRDIVSWNLIISGYASCLGYRFLEEGKKLFDQMPRKDFVSWNTMISGYAK 150

Query: 174 NGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPIN 353
           NG  +EA+RL   +      P+++                                    
Sbjct: 151 NGRMDEAIRLFESM------PERNVVSW-------------------------------- 172

Query: 354 NALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           NA+IT + R G    A   F+ M  ++D  S ++ + G   NG   EA
Sbjct: 173 NAMITGFLRNGDTVSATEYFERMP-EQDSTSVSAFVSGLVQNGDLDEA 219


>ref|XP_010646505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score =  202 bits (515), Expect = 6e-50
 Identities = 92/165 (55%), Positives = 123/165 (74%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA  LF EMPNPD+ +WNSMISG+AQ G+LELAR+ F   P K+L+SWNS+I+GYE NG+
Sbjct: 353 EAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGD 412

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y+ A  L  Q+  +GE+PD+HT              HLGMQIH  + K VI D+PINN+L
Sbjct: 413 YKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSL 472

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I +AR++FDE+ L+++V+SWN++IGGYA++G A +A
Sbjct: 473 ITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADA 517



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E   LF EMP  D  SWN+MISGY ++G ++ A   FD    ++++SWN++++G+ QNG+
Sbjct: 149 EGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGD 208

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIAD-----VP 347
            E A+    ++      P++ +               L      L+      D     V 
Sbjct: 209 VERAIEFFMRM------PERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVH 262

Query: 348 INNALITMYSRCGVISDARSVFDEM-----------ALKRDVVSWNSIIGGY 470
             N L+  Y + G +  AR +FD++             +R+VVSWNS+I  Y
Sbjct: 263 AYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCY 314



 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQ-NG 179
           EA  LF  MP  +  +WNSMI+GY +  ++  AR  FD+ P++ ++SWN +ISGY    G
Sbjct: 85  EARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMPDRDVVSWNLMISGYVSCQG 144

Query: 180 EYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNA 359
            + E  R                                     HL  ++   D    N 
Sbjct: 145 RWVEEGR-------------------------------------HLFDEMPERDCVSWNT 167

Query: 360 LITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
           +I+ Y+R G + +A  +FD M  +R+VVSWN+++ G+  NG
Sbjct: 168 MISGYTRSGRMDEALQLFDSMQ-ERNVVSWNAMVTGFLQNG 207


>emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score =  202 bits (515), Expect = 6e-50
 Identities = 92/165 (55%), Positives = 123/165 (74%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA  LF EMPNPD+ +WNSMISG+AQ G+LELAR+ F   P K+L+SWNS+I+GYE NG+
Sbjct: 353 EAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGD 412

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y+ A  L  Q+  +GE+PD+HT              HLGMQIH  + K VI D+PINN+L
Sbjct: 413 YKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSL 472

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I +AR++FDE+ L+++V+SWN++IGGYA++G A +A
Sbjct: 473 ITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADA 517



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E   LF EMP  D  SWN+MISGY ++G ++ A   FD    ++++SWN++++G+ QNG+
Sbjct: 149 EGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGD 208

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIAD-----VP 347
            E A+    ++      P++ +               L      L+      D     V 
Sbjct: 209 VERAIEFFMRM------PERDSASLSALVAGLIQNGELDEAKRILLTTRRQDDDKGDLVH 262

Query: 348 INNALITMYSRCGVISDARSVFDEM-----------ALKRDVVSWNSIIGGY 470
             N L+  Y + G +  AR +FD++             +R+VVSWNS+I  Y
Sbjct: 263 AYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCY 314



 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQ-NG 179
           EA  LF  MP  +  +WNSMI+GY +  ++  AR  FD+ P++ ++SWN +ISGY    G
Sbjct: 85  EARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMPDRDVVSWNLMISGYVSCRG 144

Query: 180 EYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNA 359
            + E  R                                     HL  ++   D    N 
Sbjct: 145 RWVEEGR-------------------------------------HLFDEMPERDCVSWNT 167

Query: 360 LITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
           +I+ Y+R G + +A  +FD M  +R+VVSWN+++ G+  NG
Sbjct: 168 MISGYTRSGRMDEALQLFDSMQ-ERNVVSWNAMVTGFLQNG 207


>ref|XP_014490109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vigna radiata var. radiata]
          Length = 638

 Score =  202 bits (513), Expect = 1e-49
 Identities = 95/165 (57%), Positives = 126/165 (76%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+KLF EMP+PD  SWNS++SG+AQNG+L LA+ FF+K P+K+LISWN++I+GYE+N +
Sbjct: 315 EASKLFREMPSPDVLSWNSIVSGFAQNGNLNLAKYFFEKMPHKNLISWNTMIAGYEKNED 374

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y+ A RL  Q++ EGE+PDKHT              +LG QIH LV K+V+ D PINN+L
Sbjct: 375 YKGAARLFSQMRLEGEKPDKHTLSSVISVCTGLVDLYLGKQIHQLVTKIVLPDSPINNSL 434

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I DA +VF+E  L +DV++WN++IGGYA +GLA EA
Sbjct: 435 ITMYSRCGAIVDACTVFNERKLYKDVITWNAMIGGYASHGLAAEA 479



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 15/180 (8%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E  KLF  MP  DS SWN++ISGYA+NG ++ A   F+  P ++++S N++I+G+  NG 
Sbjct: 112 EGRKLFELMPQRDSVSWNTVISGYAKNGRMDQAMKLFNAMPERNVVSSNAVITGFLLNGN 171

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQ---IHHLVIKLVIADVPIN 353
            + AV     +      P+  +               L M    +H          V   
Sbjct: 172 VDLAVGFFKTM------PEHDSASLSALISGLVRNGELDMAAGILHEFGGDDKDNLVHAY 225

Query: 354 NALITMYSRCGVISDARSVFDEM------------ALKRDVVSWNSIIGGYAYNGLAVEA 497
           N LI  Y + G + +AR +FDE+              +R+VVSWNS++  Y   G  V A
Sbjct: 226 NTLIAGYGQRGHVEEARRLFDEIPDDRGGGEKDQRRFRRNVVSWNSMMMSYVKVGDIVSA 285



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYE--QN 176
           EA  LF  M + ++ +WNSMISGY    ++  AR  FD+ P + ++SWN ++SGY   + 
Sbjct: 47  EARALFDSMKHRNAVTWNSMISGYVHRREIVKARQLFDEMPQRDIVSWNLIVSGYFSCRG 106

Query: 177 GEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINN 356
             + E  R L +L  +                                      D    N
Sbjct: 107 SRFIEEGRKLFELMPQ-------------------------------------RDSVSWN 129

Query: 357 ALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
            +I+ Y++ G +  A  +F+ M  +R+VVS N++I G+  NG
Sbjct: 130 TVISGYAKNGRMDQAMKLFNAMP-ERNVVSSNAVITGFLLNG 170



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 13/172 (7%)
 Frame = +3

Query: 3   EAAKLFHEMPNP-------------DSQSWNSMISGYAQNGDLELARSFFDKTPNKSLIS 143
           EA +LF E+P+              +  SWNSM+  Y + GD+  AR  FD+   +   S
Sbjct: 240 EARRLFDEIPDDRGGGEKDQRRFRRNVVSWNSMMMSYVKVGDIVSARELFDRMVERDTCS 299

Query: 144 WNSLISGYEQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVI 323
           WN+LISGY Q    +EA +L  ++                                    
Sbjct: 300 WNTLISGYVQISNMDEASKLFREMPS---------------------------------- 325

Query: 324 KLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYN 479
                DV   N++++ +++ G ++ A+  F++M  K +++SWN++I GY  N
Sbjct: 326 ----PDVLSWNSIVSGFAQNGNLNLAKYFFEKMPHK-NLISWNTMIAGYEKN 372



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
 Frame = +3

Query: 6   AAKLFHEMPNPDSQS----WNSMISGYAQNGDLELARSFFDKTPN-------------KS 134
           AA + HE    D  +    +N++I+GY Q G +E AR  FD+ P+             ++
Sbjct: 206 AAGILHEFGGDDKDNLVHAYNTLIAGYGQRGHVEEARRLFDEIPDDRGGGEKDQRRFRRN 265

Query: 135 LISWNSLISGYEQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHH 314
           ++SWNS++  Y + G+   A                                        
Sbjct: 266 VVSWNSMMMSYVKVGDIVSA--------------------------------------RE 287

Query: 315 LVIKLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
           L  ++V  D    N LI+ Y +   + +A  +F EM    DV+SWNSI+ G+A NG
Sbjct: 288 LFDRMVERDTCSWNTLISGYVQISNMDEASKLFREMP-SPDVLSWNSIVSGFAQNG 342


>gb|KOM27811.1| hypothetical protein LR48_Vigan464s000800 [Vigna angularis]
          Length = 586

 Score =  202 bits (513), Expect = 1e-49
 Identities = 96/165 (58%), Positives = 125/165 (75%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+KLF EMP PD  SWNS++SG+AQNG+L LA+ FF+K P+K+LISWN++I+GYE+N +
Sbjct: 263 EASKLFREMPCPDVLSWNSIVSGFAQNGNLNLAKYFFEKMPHKNLISWNTMIAGYEKNED 322

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y+ A RL  Q+Q EGE+PDKHT              +LG QIH LV K+V+ D PINN+L
Sbjct: 323 YKGAARLFSQMQLEGEKPDKHTLSSVISVCTGLVDLYLGKQIHQLVTKIVLPDSPINNSL 382

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I DA +VF+E  L +DV++WN++IGGYA +GLA EA
Sbjct: 383 ITMYSRCGAIVDACTVFNERKLYKDVITWNAMIGGYASHGLAAEA 427



 Score = 76.3 bits (186), Expect = 9e-12
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E  KLF  MP  D  SWN++ISGYA+NG ++ A   F+  P ++++S+N++I+G+  NG+
Sbjct: 58  EGRKLFELMPERDCVSWNTVISGYAKNGRMDQALKLFNAMPERNVVSFNAVITGFLLNGD 117

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQ---IHHLVIKLVIAD--VP 347
            + AV     +      P+  +               L M    +H         D  V 
Sbjct: 118 VDLAVGFFKTM------PEHDSASLSALISGLVRNGELDMAAGILHEFGSDDDSKDNLVH 171

Query: 348 INNALITMYSRCGVISDARSVFDEM------------ALKRDVVSWNSIIGGYAYNGLAV 491
             N LI  Y + G + +AR +FDE+              +R+VVSWNS++  Y   G  V
Sbjct: 172 AYNTLIAGYGQRGRVEEARRLFDEIPDDRGGGEKDQRRFRRNVVSWNSMMMSYVKAGDIV 231

Query: 492 EA 497
            A
Sbjct: 232 SA 233



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQ---NGDLELARSFFDKTPNKSLISWNSLISGYEQ 173
           +A +LF EMP  D  SWN ++SGY     +  +E  R  F+  P +  +SWN++ISGY +
Sbjct: 24  KARQLFDEMPQRDIVSWNLIVSGYFSCRGSRFIEEGRKLFELMPERDCVSWNTVISGYAK 83

Query: 174 NGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPIN 353
           NG  ++A++L + +      P+++                + + +      +   D    
Sbjct: 84  NGRMDQALKLFNAM------PERNVVSFNAVITGFLLNGDVDLAVGFFK-TMPEHDSASL 136

Query: 354 NALITMYSRCGVISDARSVFDEMALKRD-----VVSWNSIIGGYAYNGLAVEA 497
           +ALI+   R G +  A  +  E     D     V ++N++I GY   G   EA
Sbjct: 137 SALISGLVRNGELDMAAGILHEFGSDDDSKDNLVHAYNTLIAGYGQRGRVEEA 189



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 13/172 (7%)
 Frame = +3

Query: 3   EAAKLFHEMPNP-------------DSQSWNSMISGYAQNGDLELARSFFDKTPNKSLIS 143
           EA +LF E+P+              +  SWNSM+  Y + GD+  AR  FD+   +   S
Sbjct: 188 EARRLFDEIPDDRGGGEKDQRRFRRNVVSWNSMMMSYVKAGDIVSARELFDRMVERDTCS 247

Query: 144 WNSLISGYEQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVI 323
           WN+LISGY Q    +EA +L  ++                                    
Sbjct: 248 WNTLISGYVQISNMDEASKLFREMP----------------------------------- 272

Query: 324 KLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYN 479
                DV   N++++ +++ G ++ A+  F++M  K +++SWN++I GY  N
Sbjct: 273 ---CPDVLSWNSIVSGFAQNGNLNLAKYFFEKMPHK-NLISWNTMIAGYEKN 320



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 19/178 (10%)
 Frame = +3

Query: 6   AAKLFHEMPNPDSQ------SWNSMISGYAQNGDLELARSFFDKTPN------------- 128
           AA + HE  + D        ++N++I+GY Q G +E AR  FD+ P+             
Sbjct: 152 AAGILHEFGSDDDSKDNLVHAYNTLIAGYGQRGRVEEARRLFDEIPDDRGGGEKDQRRFR 211

Query: 129 KSLISWNSLISGYEQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQI 308
           ++++SWNS++  Y + G+   A                                      
Sbjct: 212 RNVVSWNSMMMSYVKAGDIVSA-------------------------------------- 233

Query: 309 HHLVIKLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
             L  ++V  D    N LI+ Y +   + +A  +F EM    DV+SWNSI+ G+A NG
Sbjct: 234 RELFDRMVERDTCSWNTLISGYVQISNMDEASKLFREMPCP-DVLSWNSIVSGFAQNG 290


>ref|XP_008358362.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Malus domestica]
          Length = 678

 Score =  202 bits (513), Expect = 1e-49
 Identities = 94/165 (56%), Positives = 125/165 (75%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+ LF +MPNPD+ SWNS+I GYAQ G LELAR +F+K P K+L++WNS+I+GYE+N +
Sbjct: 351 EASSLFSKMPNPDALSWNSLILGYAQVGSLELARGYFEKMPQKNLVTWNSMIAGYEKNED 410

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           +  AV L   +Q +GE+PD+HT              +LGMQIH LV K VIAD+PINN+L
Sbjct: 411 FVGAVNLFSWMQLKGEKPDRHTLSSVLSVSTGLVDLNLGMQIHQLVAKTVIADMPINNSL 470

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I +A+++FDEM L++DV+SWN++IGGYA +G A EA
Sbjct: 471 ITMYSRCGAIREAQTIFDEMKLQKDVISWNAMIGGYASHGFAAEA 515



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E   LF EMP  D  SWN++ISGYA+NG +  A   F++ P +S++SWN++I+G+ QNGE
Sbjct: 146 EGRILFDEMPERDCVSWNTIISGYAKNGRMAEALDLFNRMPERSVVSWNAMITGFLQNGE 205

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIAD------V 344
              A+    ++      P++                 L  +   ++I+    D      V
Sbjct: 206 VVRAIEFFERM------PERDGASLSALVSGLIQNGELD-EAARIIIECGNKDDGREDLV 258

Query: 345 PINNALITMYSRCGVISDARSVFDEM------------ALKRDVVSWNSIIGGYAYNGLA 488
              N LI  Y + G + +AR +FD++              +R+VVSWNS+I  Y   G  
Sbjct: 259 HAYNTLIAGYGQRGRVEEARKLFDQIPFSHKKGKEGNGRFERNVVSWNSMIMCYVKTGNV 318

Query: 489 VEA 497
           V A
Sbjct: 319 VSA 321



 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYE--QN 176
           +A ++F +MP  +  +WNSMI+GY +  ++  AR  FD+ P + +++WN +ISGY   + 
Sbjct: 81  QAREVFDQMPXRNVVTWNSMITGYVKRREMAKARKLFDEMPERDVVTWNLMISGYISCRX 140

Query: 177 GEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINN 356
             Y E  R+L       E P++                                D    N
Sbjct: 141 SRYIEEGRILFD-----EMPER--------------------------------DCVSWN 163

Query: 357 ALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
            +I+ Y++ G +++A  +F+ M  +R VVSWN++I G+  NG  V A
Sbjct: 164 TIISGYAKNGRMAEALDLFNRMP-ERSVVSWNAMITGFLQNGEVVRA 209



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
 Frame = +3

Query: 6   AAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKS------LISWNSLISGY 167
           A + F  MP  D  S ++++SG  QNG+L+ A     +  NK       + ++N+LI+GY
Sbjct: 209 AIEFFERMPERDGASLSALVSGLIQNGELDEAARIIIECGNKDDGREDLVHAYNTLIAGY 268

Query: 168 EQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVP 347
            Q G  EEA +L  Q+      P  H                 G + +    + V++   
Sbjct: 269 GQRGRVEEARKLFDQI------PFSHKK---------------GKEGNGRFERNVVS--- 304

Query: 348 INNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAY 476
             N++I  Y + G +  AR +FD+M ++RD  SWN++I GY +
Sbjct: 305 -WNSMIMCYVKTGNVVSARELFDQM-VERDTFSWNTMISGYVH 345


>ref|XP_010926266.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Elaeis guineensis]
          Length = 683

 Score =  200 bits (509), Expect = 3e-49
 Identities = 88/165 (53%), Positives = 122/165 (73%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA  LF E+P+PD++SWN MI G+ Q G++E AR  FD+ P KS +SWN++I+GYEQNG+
Sbjct: 322 EARSLFQELPDPDARSWNLMICGFTQKGEVEQAREVFDRMPQKSTVSWNTMIAGYEQNGD 381

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           YE A+ L  +++  GE+PD+HT              HLG Q+H L+ K ++AD+PINNAL
Sbjct: 382 YEGAIELFSKMRVVGEKPDRHTVSSVLSACAGLATLHLGTQVHQLITKTIVADIPINNAL 441

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMY+RCG + DA+++FD M ++RDVVSWN++IGGYA +GLA EA
Sbjct: 442 ITMYARCGKLMDAKAIFDGMEMQRDVVSWNAMIGGYAQHGLASEA 486



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 49/145 (33%), Positives = 67/145 (46%)
 Frame = +3

Query: 48  SWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGEYEEAVRLLHQLQGEG 227
           SWNSMI  Y + GDL  AR+ FD+ P + L SWN++I+GY Q  E +EA  L  +L    
Sbjct: 275 SWNSMIMCYVKAGDLCSARALFDEMPERDLFSWNTMITGYVQAQEMKEARSLFQEL---- 330

Query: 228 ERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNALITMYSRCGVISDARS 407
             PD                                 D    N +I  +++ G +  AR 
Sbjct: 331 --PD--------------------------------PDARSWNLMICGFTQKGEVEQARE 356

Query: 408 VFDEMALKRDVVSWNSIIGGYAYNG 482
           VFD M  ++  VSWN++I GY  NG
Sbjct: 357 VFDRMP-QKSTVSWNTMIAGYEQNG 380



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA  LF  MP  +  SWN+MI+G+   GD+  A   F++ P +   S N+L+SG  +NG 
Sbjct: 139 EAMHLFDTMPEKNVISWNTMITGFLGVGDVRRATELFERMPVRDAASLNALVSGLIRNGR 198

Query: 183 YEEAVRLLHQ-----------------LQGEGER--PDKHTXXXXXXXXXXXXXXHLGMQ 305
            EEA  +L Q                 + G G+R   ++                  G +
Sbjct: 199 LEEAEEILIQSGTINKIEGAVDAYNTMIAGYGQRGKVEEARRLFDLIPYQPYQERKGGEE 258

Query: 306 IH--HLVIKLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGY 470
           I      +K    +V   N++I  Y + G +  AR++FDEM  +RD+ SWN++I GY
Sbjct: 259 IKKTRRCLKCFERNVVSWNSMIMCYVKAGDLCSARALFDEMP-ERDLFSWNTMITGY 314



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGY---EQ 173
           EA + F  + + +  +WNSM+ GY ++ +L LAR  FD+ P + ++S+NS++SGY     
Sbjct: 43  EAQQFFDALLHRNVITWNSMLGGYVRHRELALARRLFDEMPQRDVVSYNSMLSGYALSRD 102

Query: 174 NGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPIN 353
            GE +E  RL  Q+      P K T               +  +  HL   +   +V   
Sbjct: 103 GGELKEGRRLFDQM------PLKDTVSWNTMISGYARNGRMD-EAMHLFDTMPEKNVISW 155

Query: 354 NALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           N +IT +   G +  A  +F+ M + RD  S N+++ G   NG   EA
Sbjct: 156 NTMITGFLGVGDVRRATELFERMPV-RDAASLNALVSGLIRNGRLEEA 202



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
 Frame = +3

Query: 54  NSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGEYEEAVRLLHQLQGEGER 233
           N  +S   Q+G L  A+ FFD   ++++I+WNS++ GY ++ E   A RL        E 
Sbjct: 29  NQALSKLIQSGRLHEAQQFFDALLHRNVITWNSMLGGYVRHRELALARRLF------DEM 82

Query: 234 PDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNALITMYSRC---GVISDAR 404
           P +                                DV   N++++ Y+     G + + R
Sbjct: 83  PQR--------------------------------DVVSYNSMLSGYALSRDGGELKEGR 110

Query: 405 SVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
            +FD+M LK D VSWN++I GYA NG   EA
Sbjct: 111 RLFDQMPLK-DTVSWNTMISGYARNGRMDEA 140


>ref|XP_012572379.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Cicer arietinum]
           gi|828318643|ref|XP_012572380.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Cicer arietinum]
          Length = 644

 Score =  199 bits (505), Expect = 9e-49
 Identities = 94/165 (56%), Positives = 124/165 (75%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+KLF EM +PD  SWNS+ISG+AQ GDL+ A+ FF++ P ++LISWNSLI+GYE+N +
Sbjct: 323 EASKLFSEMTSPDELSWNSIISGFAQIGDLKRAKEFFERMPRRNLISWNSLIAGYEKNED 382

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           ++ A+ L  ++Q EGERPDKHT              +LG QIH LV K VI D+PINN+L
Sbjct: 383 HKGAIELFSRMQLEGERPDKHTLSSVLSVCTGLVDLYLGKQIHQLVTKTVIPDLPINNSL 442

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I DAR+VF+EM L +DV++WN++IGGYA++G A  A
Sbjct: 443 ITMYSRCGAIGDARAVFNEMKLCKDVITWNAMIGGYAFHGFAAVA 487



 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 18/183 (9%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E  KLF +MP  D  SWN++ISGYA+NG ++ A   F+  P ++++S N+LI+G+  NG+
Sbjct: 121 EGRKLFDQMPQRDCVSWNTVISGYAKNGRMDQALEIFNSMPQRNVVSSNALINGFLLNGD 180

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLV---------IKLVI 335
            + AV     +      P++ +               L M    L+           LV 
Sbjct: 181 VDSAVGFFRTM------PERDSASLSGLISGLVRNGELNMAAWILIEYGNEGNEKDDLVY 234

Query: 336 ADVPINNALITMYSRCGVISDARSVFDEM---------ALKRDVVSWNSIIGGYAYNGLA 488
           A     N LI  Y + G++ +AR +FD +           +R+VVSWNS++  Y   G  
Sbjct: 235 A----YNTLIAGYGQKGMVEEARCLFDGVMSDGNEGRGRFRRNVVSWNSMMMCYVKAGDV 290

Query: 489 VEA 497
           V A
Sbjct: 291 VSA 293



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGY---EQ 173
           EA   F  + N ++ +WNSMI+GY Q  ++  AR  FD+ P+K ++SWN +ISGY     
Sbjct: 56  EARSFFDSITNRNTVTWNSMITGYVQRREISKARQLFDEMPDKDIVSWNLIISGYFSCRG 115

Query: 174 NGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPIN 353
           +   EE  +L  Q+      P +                                D    
Sbjct: 116 SRFVEEGRKLFDQM------PQR--------------------------------DCVSW 137

Query: 354 NALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
           N +I+ Y++ G +  A  +F+ M  +R+VVS N++I G+  NG
Sbjct: 138 NTVISGYAKNGRMDQALEIFNSMP-QRNVVSSNALINGFLLNG 179



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 54  NSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGEYEEAVRLLHQLQGEGER 233
           N  IS   + G L  ARSFFD   N++ ++WNS+I+GY Q  E  +A +L        E 
Sbjct: 42  NKKISHLIRTGRLTEARSFFDSITNRNTVTWNSMITGYVQRREISKARQLF------DEM 95

Query: 234 PDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNALITMYSRC---GVISDAR 404
           PDK                                D+   N +I+ Y  C     + + R
Sbjct: 96  PDK--------------------------------DIVSWNLIISGYFSCRGSRFVEEGR 123

Query: 405 SVFDEMALKRDVVSWNSIIGGYAYNG 482
            +FD+M  +RD VSWN++I GYA NG
Sbjct: 124 KLFDQMP-QRDCVSWNTVISGYAKNG 148



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
 Frame = +3

Query: 6   AAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKS------LISWNSLISGY 167
           A   F  MP  DS S + +ISG  +NG+L +A     +  N+       + ++N+LI+GY
Sbjct: 184 AVGFFRTMPERDSASLSGLISGLVRNGELNMAAWILIEYGNEGNEKDDLVYAYNTLIAGY 243

Query: 168 EQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVP 347
            Q G  EEA  L   +  +G                                     +V 
Sbjct: 244 GQKGMVEEARCLFDGVMSDGNEGRGRFR----------------------------RNVV 275

Query: 348 INNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGY 470
             N+++  Y + G +  AR +FD M ++RDV SWN++I GY
Sbjct: 276 SWNSMMMCYVKAGDVVSARELFDRM-MERDVCSWNTMISGY 315


>ref|XP_010683888.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Beta vulgaris subsp. vulgaris]
           gi|731345376|ref|XP_010683889.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Beta vulgaris subsp. vulgaris]
           gi|870854602|gb|KMT06357.1| hypothetical protein
           BVRB_7g160390 [Beta vulgaris subsp. vulgaris]
          Length = 666

 Score =  198 bits (504), Expect = 1e-48
 Identities = 89/165 (53%), Positives = 125/165 (75%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           +AA+LF +MPNPD  SWN M+SGYAQ+G+L+ A  FF++TP ++L+SWNS+I+G ++NG+
Sbjct: 334 QAAQLFSQMPNPDIMSWNMMVSGYAQSGNLDSALDFFNRTPQRNLVSWNSVIAGCDKNGD 393

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           YE A++L  Q+Q E  +PD+HT              HLG QIH L+ K +IAD+PINN+L
Sbjct: 394 YEGAIKLFIQMQIEEVKPDRHTLSSILSVCTGVSALHLGRQIHQLITKTLIADIPINNSL 453

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           +TMYS CG I++AR +FDEM L++DV+SWN+IIGGYA +G A +A
Sbjct: 454 VTMYSMCGAITEARFMFDEMGLQKDVISWNAIIGGYASHGYAAKA 498



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E  +LF +MP  D  SWN+MISGYA+ G ++ A   F     + +I+WN++++G+ QNG+
Sbjct: 128 EGKRLFDQMPKRDLVSWNTMISGYARVGRMDDALCLFKMMSARDVITWNAMVTGFLQNGD 187

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
            + A+    ++                          + ++    V       V   N L
Sbjct: 188 ADRAIEWFRKMPKRDASSLSALISGLIRIDEWDKAKEILLECGKEVENEKQDLVQAYNTL 247

Query: 363 ITMYSRCGVISDARSVFDEMA------------LKRDVVSWNSIIGGYAYNGLAVEA 497
           I  Y + G + +ARSVFD+M+            ++R+VVSWN++I  Y   G  + A
Sbjct: 248 IAGYGQKGRVDEARSVFDQMSYCPYGSVRGKIGVERNVVSWNAMIMSYIKVGDVISA 304



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 6/160 (3%)
 Frame = +3

Query: 36  PDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGEYEEAVRLLHQL 215
           PD + WN  I+   +NG    ARS FD+   ++ ++WNS++SGY ++GE  +A RL  ++
Sbjct: 39  PDLRVWNKHITQLIRNGRFSEARSLFDRMSVRNTVTWNSMMSGYVKDGEIWKARRLFDEM 98

Query: 216 QGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHH------LVIKLVIADVPINNALITMYS 377
                 PD                   G  + +      L  ++   D+   N +I+ Y+
Sbjct: 99  ------PDNVRDVVSWNLMISGYVSRRGAGMRYVEEGKRLFDQMPKRDLVSWNTMISGYA 152

Query: 378 RCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           R G + DA  +F  M+  RDV++WN+++ G+  NG A  A
Sbjct: 153 RVGRMDDALCLFKMMSA-RDVITWNAMVTGFLQNGDADRA 191



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
 Frame = +3

Query: 45  QSWNSMISGYAQNGDLELARSFFDKTP-------------NKSLISWNSLISGYEQNGEY 185
           Q++N++I+GY Q G ++ ARS FD+                ++++SWN++I  Y + G+ 
Sbjct: 242 QAYNTLIAGYGQKGRVDEARSVFDQMSYCPYGSVRGKIGVERNVVSWNAMIMSYIKVGDV 301

Query: 186 EEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNALI 365
             A  L +Q+       D+ T               +  Q   L  ++   D+   N ++
Sbjct: 302 ISARELFNQM------VDRDTFSWNTMISGYVQTSDM-EQAAQLFSQMPNPDIMSWNMMV 354

Query: 366 TMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
           + Y++ G +  A   F+    +R++VSWNS+I G   NG
Sbjct: 355 SGYAQSGNLDSALDFFNRTP-QRNLVSWNSVIAGCDKNG 392


>ref|XP_008782324.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Phoenix dactylifera]
          Length = 699

 Score =  198 bits (504), Expect = 1e-48
 Identities = 90/165 (54%), Positives = 119/165 (72%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA  LF E P+PD++SWN MI G+ Q G++E AR FFD+ P KS +SWN++I+GYEQNG+
Sbjct: 338 EAQSLFQEFPDPDARSWNLMICGFTQKGEVEQAREFFDRMPQKSTVSWNTMIAGYEQNGD 397

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           YE A+ L  ++Q  GE+PD+HT              HLG QIH LV K ++AD+PINNAL
Sbjct: 398 YEGAIELFSKMQVVGEKPDRHTLSSVLSACAGLAILHLGTQIHQLVTKTIVADIPINNAL 457

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMY+RCG + DA ++FD   ++RDVVSWN++IGGYA +G A EA
Sbjct: 458 ITMYARCGNLMDAMAIFDGRDMQRDVVSWNAMIGGYAKHGFASEA 502



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGY---EQ 173
           EA ++F  +P+ +  +WNSM++GY ++ +L LAR  F++ P + ++S+NS++SGY     
Sbjct: 59  EARRVFDALPHRNVITWNSMLTGYVRHCELALARRLFNEMPQRDVVSYNSMLSGYAFSRD 118

Query: 174 NGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPIN 353
            GE +E   L  Q+      P K T               +G +  HL   +   +V   
Sbjct: 119 GGELKEGRHLFDQM------PLKDTVSWNTMISGYARNGRMG-EAMHLFDTMPEKNVISW 171

Query: 354 NALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           N +IT +   G +  A  +F+ M + RD  S N+++ G   NG   EA
Sbjct: 172 NTMITGFLGVGDVRRATELFERMPV-RDAASLNALVSGLIRNGRLEEA 218



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA  LF  MP  +  SWN+MI+G+   GD+  A   F++ P +   S N+L+SG  +NG 
Sbjct: 155 EAMHLFDTMPEKNVISWNTMITGFLGVGDVRRATELFERMPVRDAASLNALVSGLIRNGR 214

Query: 183 YEEAVRLLHQ-----------------LQGEGER--PDKHTXXXXXXXXXXXXXXHLGMQ 305
            EEA  +L Q                 + G G+R   ++                  G +
Sbjct: 215 LEEAEEILIQSGTINKIEGAVDAYNTMIAGYGQRGKVEEARRLFDLIPYQPYQERKGGEE 274

Query: 306 IHHL--VIKLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGY 470
           I       K    +    N++I  Y + G +  AR++FDEM  +RD+ SWN++I GY
Sbjct: 275 IKKTRHCFKCFERNAVSWNSMIMCYVKAGDLCSARALFDEMP-ERDLFSWNTMITGY 330



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
 Frame = +3

Query: 54  NSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGEYEEAVRLLHQLQGEGER 233
           N  +S   Q+G L  AR  FD  P++++I+WNS+++GY ++ E   A RL +      E 
Sbjct: 45  NQALSKLIQSGRLHEARRVFDALPHRNVITWNSMLTGYVRHCELALARRLFN------EM 98

Query: 234 PDKHTXXXXXXXXXXXXXXHLG--MQIHHLVIKLVIADVPINNALITMYSRCGVISDARS 407
           P +                  G   +  HL  ++ + D    N +I+ Y+R G + +A  
Sbjct: 99  PQRDVVSYNSMLSGYAFSRDGGELKEGRHLFDQMPLKDTVSWNTMISGYARNGRMGEAMH 158

Query: 408 VFDEMALKRDVVSWNSIIGGY 470
           +FD M  +++V+SWN++I G+
Sbjct: 159 LFDTMP-EKNVISWNTMITGF 178


>ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
           gi|947093654|gb|KRH42239.1| hypothetical protein
           GLYMA_08G077700 [Glycine max]
          Length = 647

 Score =  198 bits (504), Expect = 1e-48
 Identities = 94/165 (56%), Positives = 124/165 (75%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+KLF EMP PD  SWN ++SG+AQ GDL LA+ FF++ P K+LISWNS+I+GYE+N +
Sbjct: 324 EASKLFREMPIPDVLSWNLIVSGFAQKGDLNLAKDFFERMPLKNLISWNSIIAGYEKNED 383

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y+ A++L  ++Q EGERPD+HT              +LG QIH LV K+VI D PINN+L
Sbjct: 384 YKGAIQLFSRMQFEGERPDRHTLSSVMSVCTGLVNLYLGKQIHQLVTKIVIPDSPINNSL 443

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I DA +VF+E+ L +DV++WN++IGGYA +GLA EA
Sbjct: 444 ITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGLAAEA 488



 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 15/180 (8%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E  +LF  MP  D  SWN++ISGYA+NG ++ A   F+  P ++ +S N+LI+G+  NG+
Sbjct: 122 EGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGD 181

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIAD---VPIN 353
            + AV     +      P+ ++               L M    ++ +    D   V   
Sbjct: 182 VDSAVDFFRTM------PEHYSTSLSALISGLVRNGELDMAA-GILCECGNGDDDLVHAY 234

Query: 354 NALITMYSRCGVISDARSVFD------------EMALKRDVVSWNSIIGGYAYNGLAVEA 497
           N LI  Y + G + +AR +FD            +   +R+VVSWNS++  Y   G  V A
Sbjct: 235 NTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSA 294



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 2/162 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYE--QN 176
           EA  LF  M + D+ +WNSMI+GY    ++  AR  FD+ P + ++SWN ++SGY   + 
Sbjct: 57  EARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVVSWNLIVSGYFSCRG 116

Query: 177 GEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINN 356
             + E  R L +L  +                                      D    N
Sbjct: 117 SRFVEEGRRLFELMPQ-------------------------------------RDCVSWN 139

Query: 357 ALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
            +I+ Y++ G +  A  +F+ M  +R+ VS N++I G+  NG
Sbjct: 140 TVISGYAKNGRMDQALKLFNAMP-ERNAVSSNALITGFLLNG 180



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
 Frame = +3

Query: 6   AAKLFHEMPNPDSQ---SWNSMISGYAQNGDLELARSFFDKTPN-------------KSL 137
           AA +  E  N D     ++N++I+GY Q G +E AR  FD  P+             +++
Sbjct: 216 AAGILCECGNGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNV 275

Query: 138 ISWNSLISGYEQNGEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHL 317
           +SWNS++  Y + G+   A  L  ++       ++ T              ++  +   L
Sbjct: 276 VSWNSMMMCYVKAGDIVSARELFDRM------VEQDTCSWNTMISGYVQISNM-EEASKL 328

Query: 318 VIKLVIADVPINNALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYN 479
             ++ I DV   N +++ +++ G ++ A+  F+ M LK +++SWNSII GY  N
Sbjct: 329 FREMPIPDVLSWNLIVSGFAQKGDLNLAKDFFERMPLK-NLISWNSIIAGYEKN 381


>ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
           gi|947110031|gb|KRH58357.1| hypothetical protein
           GLYMA_05G122700 [Glycine max]
           gi|947110032|gb|KRH58358.1| hypothetical protein
           GLYMA_05G122700 [Glycine max]
          Length = 649

 Score =  198 bits (503), Expect = 1e-48
 Identities = 93/165 (56%), Positives = 124/165 (75%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           EA+KLF EMP+PD  SWNS+ISG AQ GDL LA+ FF++ P+K+LISWN++I+GYE+N +
Sbjct: 326 EASKLFREMPSPDVLSWNSIISGLAQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNED 385

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINNAL 362
           Y+ A++L  ++Q EGERPDKHT              +LG Q+H LV K V+ D PINN+L
Sbjct: 386 YKGAIKLFSEMQLEGERPDKHTLSSVISVSTGLVDLYLGKQLHQLVTKTVLPDSPINNSL 445

Query: 363 ITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNGLAVEA 497
           ITMYSRCG I DA +VF+E+ L +DV++WN++IGGYA +G A EA
Sbjct: 446 ITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGSAAEA 490



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQNGE 182
           E  +LF  MP  D  SWN++ISGYA+NG ++ A   F+  P  + +S+N++I+G+  NG+
Sbjct: 121 EGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNAVITGFLLNGD 180

Query: 183 YEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIAD------V 344
            E AV     +      P+  +               L +    ++ +    D      V
Sbjct: 181 VESAVGFFRTM------PEHDSTSLCALISGLVRNGELDLAA-GILRECGNGDDGKDDLV 233

Query: 345 PINNALITMYSRCGVISDARSVFD------------EMALKRDVVSWNSIIGGYAYNG 482
              N LI  Y + G + +AR +FD            +   +R+VVSWNS++  Y   G
Sbjct: 234 HAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKAG 291



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
 Frame = +3

Query: 3   EAAKLFHEMPNPDSQSWNSMISGYAQNGDLELARSFFDKTPNKSLISWNSLISGYEQ--N 176
           EA  LF  M   D+ +WNSMISGY Q  ++  AR  FD+ P + ++SWN ++SGY     
Sbjct: 56  EARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVVSWNLIVSGYFSCCG 115

Query: 177 GEYEEAVRLLHQLQGEGERPDKHTXXXXXXXXXXXXXXHLGMQIHHLVIKLVIADVPINN 356
             + E  R L +L  +                                      D    N
Sbjct: 116 SRFVEEGRRLFELMPQ-------------------------------------RDCVSWN 138

Query: 357 ALITMYSRCGVISDARSVFDEMALKRDVVSWNSIIGGYAYNG 482
            +I+ Y++ G +  A  +F+ M  + + VS+N++I G+  NG
Sbjct: 139 TVISGYAKNGRMDQALKLFNAMP-EHNAVSYNAVITGFLLNG 179