BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00053458
         (702 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polyme...   248   2e-63
ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polyme...   248   2e-63
ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme...   241   4e-61
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme...   241   4e-61
ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polyme...   238   3e-60
ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polyme...   238   4e-60
ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polyme...   238   4e-60
ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polyme...   238   4e-60
ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polyme...   237   6e-60
ref|XP_009385774.1| PREDICTED: probable RNA-dependent RNA polyme...   233   7e-59
ref|XP_010916733.1| PREDICTED: probable RNA-dependent RNA polyme...   232   2e-58
gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sin...   227   5e-57
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   227   5e-57
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   227   5e-57
ref|XP_011626804.1| PREDICTED: probable RNA-dependent RNA polyme...   227   6e-57
gb|ERN15132.1| hypothetical protein AMTR_s00056p00110240 [Ambore...   227   6e-57
ref|XP_013671950.1| PREDICTED: probable RNA-dependent RNA polyme...   226   1e-56
emb|CDX82751.1| BnaC07g01150D [Brassica napus]                        226   1e-56
ref|XP_013596639.1| PREDICTED: probable RNA-dependent RNA polyme...   226   1e-56
ref|XP_013596637.1| PREDICTED: probable RNA-dependent RNA polyme...   226   1e-56

>ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
           [Nelumbo nucifera]
          Length = 1022

 Score =  248 bits (634), Expect = 2e-63
 Identities = 133/247 (53%), Positives = 166/247 (67%), Gaps = 14/247 (5%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAGNEGDQNC 522
           K LDWDS KT++Y C V+PDGSY+FKGPYL    THL RVLG+D +L+VKF     ++N 
Sbjct: 195 KFLDWDSGKTYLYHCLVDPDGSYSFKGPYLDTKKTHLQRVLGDDKVLIVKFIQESTNRNG 254

Query: 521 SSS-----PVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLE 357
           S+S       Y RI KEGIL+GL R+ FFVFKDGGKE           +S VKCYFVCLE
Sbjct: 255 STSYNILNTNYGRIAKEGILLGLLRYHFFVFKDGGKEKKRKNPA----SSPVKCYFVCLE 310

Query: 356 SSG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNI 204
           S+          L +KSV EARS FMH+H + S+ KYM R SLILSKT KL++D ASV+I
Sbjct: 311 SNVSLDEKTQYILFNKSVHEARSVFMHVHTVSSISKYMARFSLILSKTIKLEVDLASVDI 370

Query: 203 EIIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGKNTSLDGYKRVL 24
           + I+D+PC D++G+ + N+ G+ LIHT+GTGFISEDLAL C  NV KGKN       R+ 
Sbjct: 371 QKIEDEPCRDEDGHIICNEGGEPLIHTNGTGFISEDLALKCPMNVVKGKNLKQGEIMRIS 430

Query: 23  DRNAAEE 3
             +  EE
Sbjct: 431 GHDGIEE 437


>ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
           [Nelumbo nucifera]
          Length = 1045

 Score =  248 bits (634), Expect = 2e-63
 Identities = 133/247 (53%), Positives = 166/247 (67%), Gaps = 14/247 (5%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAGNEGDQNC 522
           K LDWDS KT++Y C V+PDGSY+FKGPYL    THL RVLG+D +L+VKF     ++N 
Sbjct: 195 KFLDWDSGKTYLYHCLVDPDGSYSFKGPYLDTKKTHLQRVLGDDKVLIVKFIQESTNRNG 254

Query: 521 SSS-----PVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLE 357
           S+S       Y RI KEGIL+GL R+ FFVFKDGGKE           +S VKCYFVCLE
Sbjct: 255 STSYNILNTNYGRIAKEGILLGLLRYHFFVFKDGGKEKKRKNPA----SSPVKCYFVCLE 310

Query: 356 SSG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNI 204
           S+          L +KSV EARS FMH+H + S+ KYM R SLILSKT KL++D ASV+I
Sbjct: 311 SNVSLDEKTQYILFNKSVHEARSVFMHVHTVSSISKYMARFSLILSKTIKLEVDLASVDI 370

Query: 203 EIIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGKNTSLDGYKRVL 24
           + I+D+PC D++G+ + N+ G+ LIHT+GTGFISEDLAL C  NV KGKN       R+ 
Sbjct: 371 QKIEDEPCRDEDGHIICNEGGEPLIHTNGTGFISEDLALKCPMNVVKGKNLKQGEIMRIS 430

Query: 23  DRNAAEE 3
             +  EE
Sbjct: 431 GHDGIEE 437


>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Vitis vinifera]
          Length = 954

 Score =  241 bits (614), Expect = 4e-61
 Identities = 125/220 (56%), Positives = 156/220 (70%), Gaps = 5/220 (2%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAGNEGDQ-- 528
           ++ DWDS+KT +Y CHV PDGSY FKGPYL K  THL RVLG++NILLVKFA +  D+  
Sbjct: 165 RSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSS 224

Query: 527 -NCS--SSPVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLE 357
            NCS  S+  Y +I +EGI VGLR+++FFVFKDGGKE            S+VKCYFV +E
Sbjct: 225 LNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNP-----TSSVKCYFVFME 279

Query: 356 SSGLHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNIEIIKDQPCL 177
           SS L  K+V EAR  FMH H + S+ KYM R SLILSKT KL +D ++VNI+ I D+P  
Sbjct: 280 SSALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGR 339

Query: 176 DQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGK 57
           D++G+ V ++D   LI TDGTGFISEDLAL C  N+ +GK
Sbjct: 340 DEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGK 379


>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
           [Vitis vinifera] gi|297738765|emb|CBI28010.3| unnamed
           protein product [Vitis vinifera]
          Length = 929

 Score =  241 bits (614), Expect = 4e-61
 Identities = 125/220 (56%), Positives = 156/220 (70%), Gaps = 5/220 (2%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAGNEGDQ-- 528
           ++ DWDS+KT +Y CHV PDGSY FKGPYL K  THL RVLG++NILLVKFA +  D+  
Sbjct: 165 RSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSS 224

Query: 527 -NCS--SSPVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLE 357
            NCS  S+  Y +I +EGI VGLR+++FFVFKDGGKE            S+VKCYFV +E
Sbjct: 225 LNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNP-----TSSVKCYFVFME 279

Query: 356 SSGLHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNIEIIKDQPCL 177
           SS L  K+V EAR  FMH H + S+ KYM R SLILSKT KL +D ++VNI+ I D+P  
Sbjct: 280 SSALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGR 339

Query: 176 DQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGK 57
           D++G+ V ++D   LI TDGTGFISEDLAL C  N+ +GK
Sbjct: 340 DEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGK 379


>ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Phoenix dactylifera]
          Length = 1006

 Score =  238 bits (607), Expect = 3e-60
 Identities = 131/242 (54%), Positives = 160/242 (66%), Gaps = 15/242 (6%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAGN----EG 534
           KNLDWDS KT VY C V+ DG+Y FKGPYLQ   THL RVLG+DN+LLVKF       + 
Sbjct: 198 KNLDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKFVEEMRREKR 257

Query: 533 DQNC--SSSPVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCL 360
             +C  SSS VY +I KEGILVGLRR+ FFV KDGGKE           +S VKCYFV +
Sbjct: 258 SAHCIVSSSDVYHKIAKEGILVGLRRYYFFVSKDGGKEEKKKSPT----SSPVKCYFVRM 313

Query: 359 ESSG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVN 207
           ESS          L DK + EAR+ FMH H + S+ KYM R SLILSKT KL +D ASV+
Sbjct: 314 ESSWAMDKDEPYILSDKLIHEARTIFMHAHTVSSLAKYMARFSLILSKTIKLDIDLASVH 373

Query: 206 IEIIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGKNTSLDGYKRV 27
           ++ I+D PC+D++GN V ++DG   IHTDGTGFISEDLA+ C  N+ KG        +++
Sbjct: 374 VKQIEDIPCMDEDGNIVYDEDGKPRIHTDGTGFISEDLAMKCPGNIFKGHCLIPGDIQKI 433

Query: 26  LD 21
           LD
Sbjct: 434 LD 435


>ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3 [Musa
           acuminata subsp. malaccensis]
          Length = 947

 Score =  238 bits (606), Expect = 4e-60
 Identities = 121/230 (52%), Positives = 158/230 (68%), Gaps = 15/230 (6%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFA---GNEGD 531
           KN+DWDS K  VY CHV+ + ++TFKGPYLQ   THL R+LG+DN+LLVKF      E  
Sbjct: 193 KNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTDEMSGEKR 252

Query: 530 QNCS---SSPVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCL 360
            +CS   S+ VY ++ +EGI VGLR +QFFVFKDGGKE           +S VKCYFV +
Sbjct: 253 SSCSFQISNSVYHKVAEEGIFVGLRWYQFFVFKDGGKEKKKSPT-----SSPVKCYFVRM 307

Query: 359 ESSG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVN 207
           ES+          L DK + EAR+ FMHIH + S+ KYM R SLILSKT KL +D +S++
Sbjct: 308 ESNWGVDQEKAYILSDKFIHEARTVFMHIHTVSSLSKYMARFSLILSKTIKLDIDLSSIH 367

Query: 206 IEIIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGK 57
           +E+I D PC+D NGN +  ++GD +IHTDGTGFISEDLA+ C +++ +GK
Sbjct: 368 VEVIDDIPCVDDNGNILCGENGDPMIHTDGTGFISEDLAMKCPQHIYRGK 417


>ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 995

 Score =  238 bits (606), Expect = 4e-60
 Identities = 121/230 (52%), Positives = 158/230 (68%), Gaps = 15/230 (6%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFA---GNEGD 531
           KN+DWDS K  VY CHV+ + ++TFKGPYLQ   THL R+LG+DN+LLVKF      E  
Sbjct: 192 KNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTDEMSGEKR 251

Query: 530 QNCS---SSPVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCL 360
            +CS   S+ VY ++ +EGI VGLR +QFFVFKDGGKE           +S VKCYFV +
Sbjct: 252 SSCSFQISNSVYHKVAEEGIFVGLRWYQFFVFKDGGKEKKKSPT-----SSPVKCYFVRM 306

Query: 359 ESSG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVN 207
           ES+          L DK + EAR+ FMHIH + S+ KYM R SLILSKT KL +D +S++
Sbjct: 307 ESNWGVDQEKAYILSDKFIHEARTVFMHIHTVSSLSKYMARFSLILSKTIKLDIDLSSIH 366

Query: 206 IEIIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGK 57
           +E+I D PC+D NGN +  ++GD +IHTDGTGFISEDLA+ C +++ +GK
Sbjct: 367 VEVIDDIPCVDDNGNILCGENGDPMIHTDGTGFISEDLAMKCPQHIYRGK 416


>ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 996

 Score =  238 bits (606), Expect = 4e-60
 Identities = 121/230 (52%), Positives = 158/230 (68%), Gaps = 15/230 (6%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFA---GNEGD 531
           KN+DWDS K  VY CHV+ + ++TFKGPYLQ   THL R+LG+DN+LLVKF      E  
Sbjct: 193 KNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTDEMSGEKR 252

Query: 530 QNCS---SSPVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCL 360
            +CS   S+ VY ++ +EGI VGLR +QFFVFKDGGKE           +S VKCYFV +
Sbjct: 253 SSCSFQISNSVYHKVAEEGIFVGLRWYQFFVFKDGGKEKKKSPT-----SSPVKCYFVRM 307

Query: 359 ESSG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVN 207
           ES+          L DK + EAR+ FMHIH + S+ KYM R SLILSKT KL +D +S++
Sbjct: 308 ESNWGVDQEKAYILSDKFIHEARTVFMHIHTVSSLSKYMARFSLILSKTIKLDIDLSSIH 367

Query: 206 IEIIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGK 57
           +E+I D PC+D NGN +  ++GD +IHTDGTGFISEDLA+ C +++ +GK
Sbjct: 368 VEVIDDIPCVDDNGNILCGENGDPMIHTDGTGFISEDLAMKCPQHIYRGK 417


>ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
           [Phoenix dactylifera]
          Length = 957

 Score =  237 bits (604), Expect = 6e-60
 Identities = 129/229 (56%), Positives = 155/229 (67%), Gaps = 15/229 (6%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAGN----EG 534
           KNLDWDS KT VY C V+ DG+Y FKGPYLQ   THL RVLG+DN+LLVKF       + 
Sbjct: 198 KNLDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKFVEEMRREKR 257

Query: 533 DQNC--SSSPVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCL 360
             +C  SSS VY +I KEGILVGLRR+ FFV KDGGKE           +S VKCYFV +
Sbjct: 258 SAHCIVSSSDVYHKIAKEGILVGLRRYYFFVSKDGGKEEKKKSPT----SSPVKCYFVRM 313

Query: 359 ESSG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVN 207
           ESS          L DK + EAR+ FMH H + S+ KYM R SLILSKT KL +D ASV+
Sbjct: 314 ESSWAMDKDEPYILSDKLIHEARTIFMHAHTVSSLAKYMARFSLILSKTIKLDIDLASVH 373

Query: 206 IEIIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKG 60
           ++ I+D PC+D++GN V ++DG   IHTDGTGFISEDLA+ C  N+ KG
Sbjct: 374 VKQIEDIPCMDEDGNIVYDEDGKPRIHTDGTGFISEDLAMKCPGNIFKG 422


>ref|XP_009385774.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X4 [Musa
           acuminata subsp. malaccensis]
          Length = 802

 Score =  233 bits (595), Expect = 7e-59
 Identities = 119/228 (52%), Positives = 156/228 (68%), Gaps = 15/228 (6%)
 Frame = -2

Query: 695 LDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFA---GNEGDQN 525
           +DWDS K  VY CHV+ + ++TFKGPYLQ   THL R+LG+DN+LLVKF      E   +
Sbjct: 1   MDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTDEMSGEKRSS 60

Query: 524 CS---SSPVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLES 354
           CS   S+ VY ++ +EGI VGLR +QFFVFKDGGKE           +S VKCYFV +ES
Sbjct: 61  CSFQISNSVYHKVAEEGIFVGLRWYQFFVFKDGGKEKKKSPT-----SSPVKCYFVRMES 115

Query: 353 SG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNIE 201
           +          L DK + EAR+ FMHIH + S+ KYM R SLILSKT KL +D +S+++E
Sbjct: 116 NWGVDQEKAYILSDKFIHEARTVFMHIHTVSSLSKYMARFSLILSKTIKLDIDLSSIHVE 175

Query: 200 IIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGK 57
           +I D PC+D NGN +  ++GD +IHTDGTGFISEDLA+ C +++ +GK
Sbjct: 176 VIDDIPCVDDNGNILCGENGDPMIHTDGTGFISEDLAMKCPQHIYRGK 223


>ref|XP_010916733.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Elaeis
           guineensis]
          Length = 809

 Score =  232 bits (592), Expect = 2e-58
 Identities = 126/229 (55%), Positives = 153/229 (66%), Gaps = 15/229 (6%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFA----GNEG 534
           K LDWDS KT VY C V+ DG+Y FKGPYLQ   THL RVLG+DN+LLVKFA    G + 
Sbjct: 198 KALDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKFAEDMHGEKR 257

Query: 533 DQNC--SSSPVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCL 360
             +C  SS+ VY +  KEGILVGLRR+ FFVFKDGGKE           +S V+CYFV +
Sbjct: 258 SAHCIVSSTDVYHKFAKEGILVGLRRYYFFVFKDGGKEEKKKSPT----SSTVRCYFVRM 313

Query: 359 ESSG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVN 207
           ESS          L DK   EAR  FMH H + S+ KYM R SLILSKT KL +D  SV+
Sbjct: 314 ESSWAMDEDKPYILSDKLTHEARIIFMHAHMVSSLAKYMTRFSLILSKTIKLDIDLTSVH 373

Query: 206 IEIIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKG 60
           ++ I+D  C+D+NGN + ++DG+  IHTDGTGFISEDLA+ C  N+ KG
Sbjct: 374 VKDIEDITCMDENGNIMYDEDGEPRIHTDGTGFISEDLAMKCPGNIYKG 422


>gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sinensis]
          Length = 1015

 Score =  227 bits (579), Expect = 5e-57
 Identities = 128/245 (52%), Positives = 156/245 (63%), Gaps = 14/245 (5%)
 Frame = -2

Query: 698 NLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKF----AGNEGD 531
           +L WDS KT +Y CH+   G+ TFKGPYL +  THL R LG+DNILLVKF     G+   
Sbjct: 215 SLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDEELGGHRSS 274

Query: 530 QNCSSS-PVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLES 354
            N + S   Y  I +EGILVGLR + FFVFKDGGKE            S VKCYFV +ES
Sbjct: 275 NNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPS----TSPVKCYFVRMES 330

Query: 353 SGLHD---------KSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNIE 201
           S   D         K+V EAR  FMH+  + S+  YM RLSLILSKT KL++DF+ +NIE
Sbjct: 331 SAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIE 390

Query: 200 IIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGKNTSLDGYKRVLD 21
            I+D+PC D++GN V  +DG+ LIHTDGTGFISEDLAL C   V K K T+ D  +R +D
Sbjct: 391 RIEDEPCRDKDGNVV-YKDGEALIHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERSID 449

Query: 20  RNAAE 6
           R   E
Sbjct: 450 RKELE 454


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
           gi|568843311|ref|XP_006475557.1| PREDICTED: probable
           RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
           sinensis] gi|557554498|gb|ESR64512.1| hypothetical
           protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  227 bits (579), Expect = 5e-57
 Identities = 128/245 (52%), Positives = 156/245 (63%), Gaps = 14/245 (5%)
 Frame = -2

Query: 698 NLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKF----AGNEGD 531
           +L WDS KT +Y CH+   G+ TFKGPYL +  THL R LG+DNILLVKF     G+   
Sbjct: 213 SLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDEELGGHRSS 272

Query: 530 QNCSSS-PVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLES 354
            N + S   Y  I +EGILVGLR + FFVFKDGGKE            S VKCYFV +ES
Sbjct: 273 NNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPS----TSPVKCYFVRMES 328

Query: 353 SGLHD---------KSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNIE 201
           S   D         K+V EAR  FMH+  + S+  YM RLSLILSKT KL++DF+ +NIE
Sbjct: 329 SAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIE 388

Query: 200 IIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGKNTSLDGYKRVLD 21
            I+D+PC D++GN V  +DG+ LIHTDGTGFISEDLAL C   V K K T+ D  +R +D
Sbjct: 389 RIEDEPCRDKDGNVV-YKDGEALIHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERSID 447

Query: 20  RNAAE 6
           R   E
Sbjct: 448 RKELE 452


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
           gi|568843309|ref|XP_006475556.1| PREDICTED: probable
           RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
           sinensis] gi|557554497|gb|ESR64511.1| hypothetical
           protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  227 bits (579), Expect = 5e-57
 Identities = 128/245 (52%), Positives = 156/245 (63%), Gaps = 14/245 (5%)
 Frame = -2

Query: 698 NLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKF----AGNEGD 531
           +L WDS KT +Y CH+   G+ TFKGPYL +  THL R LG+DNILLVKF     G+   
Sbjct: 215 SLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDEELGGHRSS 274

Query: 530 QNCSSS-PVYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLES 354
            N + S   Y  I +EGILVGLR + FFVFKDGGKE            S VKCYFV +ES
Sbjct: 275 NNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPS----TSPVKCYFVRMES 330

Query: 353 SGLHD---------KSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNIE 201
           S   D         K+V EAR  FMH+  + S+  YM RLSLILSKT KL++DF+ +NIE
Sbjct: 331 SAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIE 390

Query: 200 IIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGKNTSLDGYKRVLD 21
            I+D+PC D++GN V  +DG+ LIHTDGTGFISEDLAL C   V K K T+ D  +R +D
Sbjct: 391 RIEDEPCRDKDGNVV-YKDGEALIHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERSID 449

Query: 20  RNAAE 6
           R   E
Sbjct: 450 RKELE 454


>ref|XP_011626804.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Amborella
           trichopoda]
          Length = 974

 Score =  227 bits (578), Expect = 6e-57
 Identities = 118/228 (51%), Positives = 152/228 (66%), Gaps = 15/228 (6%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAGN-----E 537
           +NLDWDS K   Y+CHV+P G+++FKGP+L+   THL RVLG+D +L VKFA        
Sbjct: 176 RNLDWDSGKAENYQCHVDPVGNFSFKGPFLESTQTHLRRVLGDDKVLTVKFAEEMVDERR 235

Query: 536 GDQNCSSSP-VYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCL 360
           G+ N S S  +++RI K+GILVGLRR+ FFVFKDGGKE            + VKCYFVC+
Sbjct: 236 GEFNLSRSKNIFRRIAKDGILVGLRRYHFFVFKDGGKEEKRKNAN----TTGVKCYFVCM 291

Query: 359 ESSG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVN 207
           +S           L +K++ EARS FM +H +P++ KYM R SLILSKT KL++D  SVN
Sbjct: 292 KSDAESDMHTPYILSNKTIQEARSMFMDVHTVPNLAKYMARFSLILSKTIKLEVDLGSVN 351

Query: 206 IEIIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSK 63
           IE I D+PCLD +   V +Q+G  LIHTDGTGFISEDL     +N+ K
Sbjct: 352 IERINDKPCLDNHNEIVYDQNGQCLIHTDGTGFISEDLMSKFSKNIFK 399


>gb|ERN15132.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
          Length = 988

 Score =  227 bits (578), Expect = 6e-57
 Identities = 118/228 (51%), Positives = 152/228 (66%), Gaps = 15/228 (6%)
 Frame = -2

Query: 701 KNLDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAGN-----E 537
           +NLDWDS K   Y+CHV+P G+++FKGP+L+   THL RVLG+D +L VKFA        
Sbjct: 190 RNLDWDSGKAENYQCHVDPVGNFSFKGPFLESTQTHLRRVLGDDKVLTVKFAEEMVDERR 249

Query: 536 GDQNCSSSP-VYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCL 360
           G+ N S S  +++RI K+GILVGLRR+ FFVFKDGGKE            + VKCYFVC+
Sbjct: 250 GEFNLSRSKNIFRRIAKDGILVGLRRYHFFVFKDGGKEEKRKNAN----TTGVKCYFVCM 305

Query: 359 ESSG---------LHDKSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVN 207
           +S           L +K++ EARS FM +H +P++ KYM R SLILSKT KL++D  SVN
Sbjct: 306 KSDAESDMHTPYILSNKTIQEARSMFMDVHTVPNLAKYMARFSLILSKTIKLEVDLGSVN 365

Query: 206 IEIIKDQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSK 63
           IE I D+PCLD +   V +Q+G  LIHTDGTGFISEDL     +N+ K
Sbjct: 366 IERINDKPCLDNHNEIVYDQNGQCLIHTDGTGFISEDLMSKFSKNIFK 413


>ref|XP_013671950.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
           [Brassica napus]
          Length = 991

 Score =  226 bits (576), Expect = 1e-56
 Identities = 117/225 (52%), Positives = 149/225 (66%), Gaps = 12/225 (5%)
 Frame = -2

Query: 695 LDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAGNEGDQN-CS 519
           L+WDS KT  Y+CHV  DGSYT KGP L+   THLH+VLG+DN+L VKFA  +   + CS
Sbjct: 199 LEWDSGKTHYYQCHVALDGSYTLKGPLLEPTGTHLHKVLGDDNVLTVKFADVQNKSSTCS 258

Query: 518 SSP--VYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLESSGL 345
           + P   Y+RI K+GI++GLRR+QFFVFKDGGKE              VKCYF+  +S+  
Sbjct: 259 NDPYSAYKRIAKDGIMIGLRRYQFFVFKDGGKEEKKKDFS----TKGVKCYFIRTDSASS 314

Query: 344 HD---------KSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNIEIIK 192
           +D         KS+ EAR HFMH+H +PS+ KYM R SLILSKT KL++D A +  E I 
Sbjct: 315 NDLGDPYIFSWKSIHEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMAGITFEEID 374

Query: 191 DQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGK 57
           D  C D+N   V +++G   IH+DGTG+ISEDLA +C  NV KGK
Sbjct: 375 DIHCRDENDKDVLDKNGKPRIHSDGTGYISEDLARMCPVNVYKGK 419


>emb|CDX82751.1| BnaC07g01150D [Brassica napus]
          Length = 977

 Score =  226 bits (576), Expect = 1e-56
 Identities = 117/225 (52%), Positives = 149/225 (66%), Gaps = 12/225 (5%)
 Frame = -2

Query: 695 LDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAGNEGDQN-CS 519
           L+WDS KT  Y+CHV  DGSYT KGP L+   THLH+VLG+DN+L VKFA  +   + CS
Sbjct: 199 LEWDSGKTHYYQCHVALDGSYTLKGPLLEPTGTHLHKVLGDDNVLTVKFADVQNKSSTCS 258

Query: 518 SSP--VYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLESSGL 345
           + P   Y+RI K+GI++GLRR+QFFVFKDGGKE              VKCYF+  +S+  
Sbjct: 259 NDPYSAYKRIAKDGIMIGLRRYQFFVFKDGGKEEKKKDFS----TKGVKCYFIRTDSASS 314

Query: 344 HD---------KSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNIEIIK 192
           +D         KS+ EAR HFMH+H +PS+ KYM R SLILSKT KL++D A +  E I 
Sbjct: 315 NDLGDPYIFSWKSIHEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMAGITFEEID 374

Query: 191 DQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGK 57
           D  C D+N   V +++G   IH+DGTG+ISEDLA +C  NV KGK
Sbjct: 375 DIHCRDENDKDVLDKNGKPRIHSDGTGYISEDLARMCPVNVYKGK 419


>ref|XP_013596639.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X4
           [Brassica oleracea var. oleracea]
          Length = 990

 Score =  226 bits (575), Expect = 1e-56
 Identities = 117/225 (52%), Positives = 148/225 (65%), Gaps = 12/225 (5%)
 Frame = -2

Query: 695 LDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAG-NEGDQNCS 519
           L+WDS KT  Y+CHV  DGSYT KGP L+   THLH+VLG+DN+L VKFA   +    CS
Sbjct: 198 LEWDSGKTHYYQCHVALDGSYTLKGPLLEPTGTHLHKVLGDDNVLTVKFADVQKKSSTCS 257

Query: 518 SSP--VYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLESSGL 345
           + P   Y+RI K+GI++GLRR+QFFVFKDGGKE              VKCYF+  +S+  
Sbjct: 258 NDPYSAYKRIAKDGIMIGLRRYQFFVFKDGGKEEKKKDFS----TKGVKCYFIRTDSASS 313

Query: 344 HD---------KSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNIEIIK 192
           +D         KS+ EAR HFMH+H +PS+ KYM R SLILSKT KL++D A +  E I 
Sbjct: 314 NDLGDPYIFSWKSIHEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMAGITFEEID 373

Query: 191 DQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGK 57
           D  C D+N   V +++G   IH+DGTG+ISEDLA +C  NV KGK
Sbjct: 374 DIHCHDENDKDVLDKNGKPRIHSDGTGYISEDLARMCPVNVYKGK 418


>ref|XP_013596637.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
           [Brassica oleracea var. oleracea]
          Length = 991

 Score =  226 bits (575), Expect = 1e-56
 Identities = 117/225 (52%), Positives = 148/225 (65%), Gaps = 12/225 (5%)
 Frame = -2

Query: 695 LDWDSEKTFVYRCHVEPDGSYTFKGPYLQKDTTHLHRVLGEDNILLVKFAG-NEGDQNCS 519
           L+WDS KT  Y+CHV  DGSYT KGP L+   THLH+VLG+DN+L VKFA   +    CS
Sbjct: 199 LEWDSGKTHYYQCHVALDGSYTLKGPLLEPTGTHLHKVLGDDNVLTVKFADVQKKSSTCS 258

Query: 518 SSP--VYQRIGKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASAVKCYFVCLESSGL 345
           + P   Y+RI K+GI++GLRR+QFFVFKDGGKE              VKCYF+  +S+  
Sbjct: 259 NDPYSAYKRIAKDGIMIGLRRYQFFVFKDGGKEEKKKDFS----TKGVKCYFIRTDSASS 314

Query: 344 HD---------KSVSEARSHFMHIHNIPSMPKYMPRLSLILSKTTKLQLDFASVNIEIIK 192
           +D         KS+ EAR HFMH+H +PS+ KYM R SLILSKT KL++D A +  E I 
Sbjct: 315 NDLGDPYIFSWKSIHEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMAGITFEEID 374

Query: 191 DQPCLDQNGNAVRNQDGDILIHTDGTGFISEDLALLCQRNVSKGK 57
           D  C D+N   V +++G   IH+DGTG+ISEDLA +C  NV KGK
Sbjct: 375 DIHCHDENDKDVLDKNGKPRIHSDGTGYISEDLARMCPVNVYKGK 419