BLASTX nr result

ID: Papaver31_contig00052511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00052511
         (548 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012477795.1| PREDICTED: uncharacterized protein LOC105793...    78   2e-12
ref|XP_013720023.1| PREDICTED: uncharacterized protein LOC106423...    74   4e-11
ref|XP_013601024.1| PREDICTED: uncharacterized protein LOC106308...    74   4e-11
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    74   6e-11
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617...    73   1e-10
ref|XP_012067550.1| PREDICTED: uncharacterized protein LOC105630...    72   2e-10
ref|XP_013613616.1| PREDICTED: uncharacterized protein LOC106319...    71   3e-10
ref|XP_013654423.1| PREDICTED: uncharacterized protein LOC106359...    71   4e-10
ref|XP_012488053.1| PREDICTED: uncharacterized protein LOC105801...    70   6e-10
ref|XP_012472298.1| PREDICTED: uncharacterized protein LOC105789...    69   1e-09
ref|XP_012445960.1| PREDICTED: uncharacterized protein LOC105769...    68   2e-09
ref|XP_010042087.1| PREDICTED: uncharacterized protein LOC104431...    68   2e-09
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    68   3e-09
ref|XP_012468868.1| PREDICTED: uncharacterized protein LOC105786...    68   3e-09
gb|EPS61484.1| hypothetical protein M569_13313 [Genlisea aurea]        67   4e-09
ref|XP_013600971.1| PREDICTED: uncharacterized protein LOC106308...    65   2e-08
ref|XP_013624739.1| PREDICTED: uncharacterized protein LOC106330...    65   2e-08
ref|XP_010039464.1| PREDICTED: uncharacterized protein LOC104428...    64   3e-08
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    64   4e-08
emb|CDY17819.1| BnaC08g04330D [Brassica napus]                         63   8e-08

>ref|XP_012477795.1| PREDICTED: uncharacterized protein LOC105793429 [Gossypium
           raimondii]
          Length = 1092

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMR--RLLPSFPNFFLVD 214
           MKII WN +G G       L  L+    P ++F++ETK     M   R    F N     
Sbjct: 1   MKIICWNVRGLGSPRAVRKLRFLLKQNNPQIVFLMETKVSEKRMEAIRRRCGFTNGL--- 57

Query: 213 PVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPV 34
            VGV GT+  + + W +  Q+ +   +I+ I+V++K   A ++W  T FYGSPYS  K  
Sbjct: 58  EVGVVGTRSGICLAWREEVQIHLRSLSISHIDVLVKGEDAHEDWRFTGFYGSPYSQNKNA 117

Query: 33  AWNFLEKI 10
           +W+ L+ +
Sbjct: 118 SWDLLKTL 125


>ref|XP_013720023.1| PREDICTED: uncharacterized protein LOC106423810 [Brassica napus]
          Length = 896

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLPS--FPNFFLVD 214
           M+I+SWN QG G   T  HL  ++    P++LF+ ETK++   +  L  S  F N   V+
Sbjct: 1   MRILSWNCQGLGNTPTVRHLKEMLGQHSPEILFLSETKNKRRYLESLAESLGFSNLKTVE 60

Query: 213 PVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPV 34
           P+G+    G LA+ W +  ++E++ ++  +I+  +K ++  K + L+C YG P   ++  
Sbjct: 61  PIGIG---GGLAVFWKEACRVEVLQAHRRVID--MKIHWQDKIFFLSCIYGEPVKGKRND 115

Query: 33  AWNFLEKIAS 4
            W  L +I +
Sbjct: 116 VWERLTRIGT 125


>ref|XP_013601024.1| PREDICTED: uncharacterized protein LOC106308412 [Brassica oleracea
           var. oleracea]
          Length = 1588

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLPS--FPNFFLVD 214
           M+I+SWN QG G   T  HL  ++    P++LF+ ETK++   +  L  S  F N   V+
Sbjct: 1   MRILSWNCQGLGNTPTVRHLKEMLGQHSPEILFLSETKNKRRYLESLAESLGFSNLKTVE 60

Query: 213 PVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPV 34
           P+G+    G LA+ W +  ++E++ ++  +I+  +K ++  K + L+C YG P   ++  
Sbjct: 61  PIGIG---GGLAVFWKEACRVEVLQAHRRVID--MKIHWQDKIFFLSCIYGEPVKGKRND 115

Query: 33  AWNFLEKIAS 4
            W  L +I +
Sbjct: 116 VWERLTRIGT 125


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 40/126 (31%), Positives = 66/126 (52%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLPSFPNFFLVDPV 208
           M+I+SWN QG G   T  HL  +     P+V+F+ ETK +   +  ++     FF +  V
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHL-GFFDLHTV 59

Query: 207 GVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPVAW 28
              G  G LA+ W D  Q++++ S+  +I+ ++   +  KE+ LTC YG P   E+   W
Sbjct: 60  EPIGKSGGLALMWKDSVQIKVLQSDKRLIDALL--IWQDKEFYLTCIYGEPVQAERGELW 117

Query: 27  NFLEKI 10
             L ++
Sbjct: 118 ERLTRL 123


>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
          Length = 1238

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLM--RRLLPSFPNFFLVD 214
           MKIISWN QG G   T      L+   +P +LF+ ETK     M  +R +  F N F+VD
Sbjct: 1   MKIISWNVQGLGKSRTFREAQKLLQELRPQILFLSETKMMAKQMEAKRRMLKFENCFVVD 60

Query: 213 PVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPV 34
             G+    G LA+ W     LE+   + + I+ +I  N     W  TC YG P S +K  
Sbjct: 61  RCGLG---GGLALLWTLDVSLEVKSYSKHHIDAVI-HNENGSSWRCTCVYGHPESEQKKH 116

Query: 33  AWNFLEKIA 7
            W+ L ++A
Sbjct: 117 TWSLLRRLA 125


>ref|XP_012067550.1| PREDICTED: uncharacterized protein LOC105630354 [Jatropha curcas]
          Length = 1197

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMR--RLLPSFPNFFLVD 214
           M++ISWN +G G     N L  L    KP VLF++ETK+    M   R+L  F   F VD
Sbjct: 1   MRVISWNCRGVGLPSAVNALKDLTLSYKPGVLFLMETKTHASRMEELRVLLRFDFCFSVD 60

Query: 213 PVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPV 34
            VG+    G L++ W     L I   + N+++  +  +     W LTCFYG P S  +  
Sbjct: 61  SVGIG---GGLSLMWNRSVPLSITSYSRNVVDCNVADSGG--NWRLTCFYGYPESGRRRA 115

Query: 33  AWNFLEKIASR 1
           +W  L  ++ R
Sbjct: 116 SWELLRSLSMR 126


>ref|XP_013613616.1| PREDICTED: uncharacterized protein LOC106319769 [Brassica oleracea
           var. oleracea]
          Length = 1071

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
 Frame = -3

Query: 372 WNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLL--PSFPNFFLVDPVGVA 199
           WN QG G   T   L    +   PD++F++ETK Q   + ++     F N F V P+G++
Sbjct: 3   WNCQGIGSDLTVRRLREFRSKNSPDIMFLMETKRQDAEIYKMYKGTDFKNLFTVPPIGMS 62

Query: 198 GTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPVAWNFL 19
              G LA+ W D  ++EI+ S+ N+I+   K  F  K + ++  YG+P   E P  W F+
Sbjct: 63  ---GGLALAWKDNVEIEILFSSPNVIDT--KIIFNNKTFFVSYIYGAPNREEWPKFWEFM 117

Query: 18  EKIAS 4
             + +
Sbjct: 118 ADLGA 122


>ref|XP_013654423.1| PREDICTED: uncharacterized protein LOC106359240 [Brassica napus]
          Length = 717

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLP--SFPNFFLVD 214
           M+++SWN QG G   T  HL  L+    P++LF+ ETK++   +  L+    F N   V+
Sbjct: 1   MRMLSWNCQGLGNTPTVRHLQELLGQHHPELLFLSETKNRRRYIEGLVEKFGFSNLKTVE 60

Query: 213 PVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPV 34
           PVG     G LA+ W    ++E++ +N  +I+  +K  +  K + LTC YG P   ++  
Sbjct: 61  PVGKG---GGLAVLWKKSCKVEVLQANRRVID--LKIQWQEKMFFLTCVYGEPIKGKRGD 115

Query: 33  AWNFLEKIAS 4
            W  + +I +
Sbjct: 116 VWERITRIGT 125


>ref|XP_012488053.1| PREDICTED: uncharacterized protein LOC105801280 [Gossypium
           raimondii]
          Length = 657

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 39/126 (30%), Positives = 62/126 (49%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLPSFPNFFLVDPV 208
           MKI+SWN +G G    R  L + +    P ++F++ETK     M R+  +      +D +
Sbjct: 1   MKILSWNVRGLGSPRARRRLRYSLKQHNPQMVFLMETKVDKQRMERVRRNCGFLNRID-I 59

Query: 207 GVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPVAW 28
              G+KG L + W     +++   + N I+V+I      + W  T FYG PY   K   W
Sbjct: 60  EADGSKGVLCLAWKGELCVDLRSLSRNHIDVLITEENVKELWRFTGFYGYPYVKNKSEPW 119

Query: 27  NFLEKI 10
           N L+K+
Sbjct: 120 NLLKKL 125


>ref|XP_012472298.1| PREDICTED: uncharacterized protein LOC105789472 [Gossypium
           raimondii]
          Length = 271

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 40/129 (31%), Positives = 66/129 (51%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLPSFPNFFLVDPV 208
           MKI+SWN QG G   T + L H +    P V+F++ETK       ++  S    F +D V
Sbjct: 1   MKILSWNVQGLGNPRTVHRLRHSLKKHYPQVIFLMETKINKKNDGKIRRSCGFHFGID-V 59

Query: 207 GVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPVAW 28
              G++G L + W     + +   +   I+VII+     ++W    F GSPYS ++  +W
Sbjct: 60  DSIGSRGGLCLAWRRNASITLQSFSSRHIDVIIEEEGDGEKWSFIGFCGSPYSYDREESW 119

Query: 27  NFLEKIASR 1
           N L ++ ++
Sbjct: 120 NLLRQLRNQ 128


>ref|XP_012445960.1| PREDICTED: uncharacterized protein LOC105769699 [Gossypium
           raimondii]
          Length = 235

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETK---SQ*PLMRRLLPSFPNFFLV 217
           MKI+ WN +G     T   L +++  + P ++F +ETK    Q  ++RR    F N   V
Sbjct: 1   MKILWWNVRGLRGHQTVRRLRYVLKLKNPQIIFFMETKLNRKQMEVVRRRC-GFHNGIKV 59

Query: 216 DPVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKP 37
           D     GT+G L + W     + +   +   I+V+I+ N    +W  T FYGSPY  ++ 
Sbjct: 60  DS---EGTRGGLCLAWRADIDVSLRSFSKRHIDVLIEDNEQGVKWRFTGFYGSPYVQDRN 116

Query: 36  VAWNFLEKIAS 4
           V+W+ L+++ +
Sbjct: 117 VSWDTLKRLTT 127


>ref|XP_010042087.1| PREDICTED: uncharacterized protein LOC104431099 [Eucalyptus
           grandis]
          Length = 704

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLP--SFPNFFLVD 214
           MK +SWN QG G   T   L  L+  ++PD+LF++E+K+Q   + R+     + + FLV 
Sbjct: 1   MKFVSWNCQGLGNPLTVQALKDLVVHDRPDLLFLMESKNQDSFLSRVQRRLHYQHSFLVS 60

Query: 213 PVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPV 34
           PVG+A   G LA+ W D   + +  S+ + I++I           LTC +      ++  
Sbjct: 61  PVGLA---GGLAVFWNDPLSVSVEDSSAHYIDLICFGPHEGSPMRLTCIHAPTSFQQRQQ 117

Query: 33  AWNFLEKIA 7
            W  L+ I+
Sbjct: 118 LWTGLKHIS 126


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 35/124 (28%), Positives = 64/124 (51%)
 Frame = -3

Query: 381 IISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLPSFPNFFLVDPVGV 202
           +ISWN QG    +T  +L  +     PD+LF++ETK+    + ++   +  +  +  V  
Sbjct: 2   VISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVF-CWLGYDFIHTVEP 60

Query: 201 AGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPVAWNF 22
            G  G LAI W    ++E ++++ N++++ + S    K W ++C YG P +  +P  W  
Sbjct: 61  EGRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSR--NKVWFISCVYGLPVTHMRPKLWEH 118

Query: 21  LEKI 10
           L  I
Sbjct: 119 LNSI 122


>ref|XP_012468868.1| PREDICTED: uncharacterized protein LOC105786945 [Gossypium
           raimondii]
          Length = 396

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLP--SFPNFFLVD 214
           MKIISWN +G G   T   L  ++    P ++F +ETK     M R+     + N   VD
Sbjct: 47  MKIISWNVRGLGRLRTVRRLRQMLRLHNPQMVFFMETKLGRQQMERIRRRCGYTNGIEVD 106

Query: 213 PVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPV 34
                GT+G L + W +   + +   +   I+V++       +W  T FYGSPY+ ++  
Sbjct: 107 S---EGTRGGLCLAWRNEVDISLNSFSKRHIDVLVDDKEIGCKWRFTGFYGSPYTQDRSE 163

Query: 33  AWNFLEKIAS 4
           +W  L+ +A+
Sbjct: 164 SWAVLKSLAT 173


>gb|EPS61484.1| hypothetical protein M569_13313 [Genlisea aurea]
          Length = 793

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLPSFPNF-FLVDP 211
           + I+SWN QG G  +T   L  LI    P  +F+ ETKS    +  L   FP + F VD 
Sbjct: 422 LHILSWNCQGMGSPWTVRRLKELIGQRSPSFVFLCETKSPACKLNWLKNLFPYYGFFVDA 481

Query: 210 VGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPVA 31
           VG +   G LA+ W     + ++  +   I+V I +  A   W LT FYG+P  + +   
Sbjct: 482 VGAS---GGLALLWRKELDVSLLSYSKWYIDVNINNPSADGHWRLTGFYGNPVCSARSEF 538

Query: 30  WNFLEKI 10
           W+ L ++
Sbjct: 539 WDLLRRL 545


>ref|XP_013600971.1| PREDICTED: uncharacterized protein LOC106308356 [Brassica oleracea
           var. oleracea]
          Length = 714

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
 Frame = -3

Query: 387 MKIISWNAQGCGPK--FTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLP--SFPNFFL 220
           M ++SWN QG G +       L  L     PDV+F++ETK++  ++  L     +   + 
Sbjct: 1   MALLSWNCQGLGREQDLVIPRLRELKRDHFPDVMFLMETKNKRDVLVDLQEWLGYDRIYT 60

Query: 219 VDPVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEK 40
           VDPVG +G    LA+ W++   +E    + ++++  I+S +    + ++C YG P   E+
Sbjct: 61  VDPVGYSG---GLALMWMNSVNIEFKFVDKHLLDFSIRSGYL--RYFVSCVYGEPVRGER 115

Query: 39  PVAWNFLEKI 10
           P  W  L +I
Sbjct: 116 PTGWERLSRI 125


>ref|XP_013624739.1| PREDICTED: uncharacterized protein LOC106330889 [Brassica oleracea
           var. oleracea]
          Length = 815

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLPS--FPNFFLVD 214
           M I+SWN QG G   T   +        PD LF++ETK +   +  L  S  +     V 
Sbjct: 358 MSILSWNCQGAGSTETVQQIREYRRKYFPDFLFLMETKQKFEYVNGLRKSLGYDQLITVK 417

Query: 213 PVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPV 34
           P G++   G LA+ W D +Q+E++ ++  +I+  +K +     + LTC YG P   ++  
Sbjct: 418 PEGLS---GGLAVLWKDSYQVEVLATDKTIID--LKVSLGSTFFFLTCVYGDPVKAKRRE 472

Query: 33  AWNFLEKIASR 1
            W+ L  I  R
Sbjct: 473 VWDRLVNIGLR 483


>ref|XP_010039464.1| PREDICTED: uncharacterized protein LOC104428159 [Eucalyptus
           grandis]
          Length = 813

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 30/96 (31%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = -3

Query: 387 MKIISWNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLP--SFPNFFLVD 214
           MK++SWN QG G   T  HL  L+  ++P+++F++ETK++  ++ R+     F   F++D
Sbjct: 1   MKVLSWNCQGLGSALTVQHLRALVALDRPELVFLMETKNRKAVVDRVRQQLKFKESFIID 60

Query: 213 PVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIK 106
           P+   GT G L   W +  ++E+   +  +I++I +
Sbjct: 61  PI---GTAGGLTAMWNEDLKVEVKEHSNELIDIICR 93


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
 Frame = -3

Query: 387 MKIISWNAQGCG-------PKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLLP--SF 235
           M ++SWN QG G       P+     L+H      P+VLF++ETK+   ++  L     +
Sbjct: 1   MSLVSWNCQGLGWSQDLTIPRLMEMRLSHF-----PEVLFLMETKNCSNVVVDLQEWLGY 55

Query: 234 PNFFLVDPVGVAGTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSP 55
              F V+P+G++G    LA+ W  G  + I +++ N+I+  I+  F   E+ ++C YG+P
Sbjct: 56  ERVFTVNPIGLSG---GLALFWKKGVDIVIKYADKNLIDFQIQ--FGSHEFYVSCVYGNP 110

Query: 54  YSTEKPVAWNFLEKI 10
             ++K + W  + +I
Sbjct: 111 AFSDKHLVWEKITRI 125


>emb|CDY17819.1| BnaC08g04330D [Brassica napus]
          Length = 162

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
 Frame = -3

Query: 372 WNAQGCGPKFTRNHLNHLINFEKPDVLFILETKSQ*PLMRRLL--PSFPNFFLVDPVGVA 199
           WN QG G   T   L      + PD++F++ETK Q   + R+     F N F V   G++
Sbjct: 3   WNCQGIGSDLTVCRLREFRRKDPPDIMFLMETKRQDEEVFRMYHGTEFTNPFTVPSDGLS 62

Query: 198 GTKGSLAIDWLDGFQLEIVHSNINMINVIIKSNFAMKEWLLTCFYGSPYSTEKPVAWNFL 19
              G LA+ W D  QLEI++S+ N+I+   K +F  K + ++  YG+P        W  L
Sbjct: 63  ---GGLALSWKDNVQLEILYSSPNVIDK--KISFNGKTFFVSYIYGAPQRENLASFWEIL 117

Query: 18  EKI 10
             I
Sbjct: 118 SDI 120


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