BLASTX nr result
ID: Papaver31_contig00050006
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00050006
(1329 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas] 179 5e-42
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 157 2e-35
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 157 3e-35
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 156 3e-35
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 154 2e-34
ref|XP_008372905.1| PREDICTED: uncharacterized protein LOC103436... 146 3e-32
ref|XP_008244843.1| PREDICTED: putative ribonuclease H protein A... 146 5e-32
ref|XP_008242678.1| PREDICTED: putative ribonuclease H protein A... 145 6e-32
ref|XP_006469101.1| PREDICTED: putative ribonuclease H protein A... 143 3e-31
ref|XP_008237302.1| PREDICTED: putative ribonuclease H protein A... 141 1e-30
ref|XP_009151561.1| PREDICTED: putative ribonuclease H protein A... 140 3e-30
ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein A... 137 2e-29
ref|XP_010687479.1| PREDICTED: uncharacterized protein LOC104901... 137 2e-29
ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein A... 136 4e-29
ref|XP_008245529.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 136 4e-29
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 135 6e-29
ref|XP_008367096.1| PREDICTED: putative ribonuclease H protein A... 134 2e-28
ref|XP_008352462.1| PREDICTED: putative ribonuclease H protein A... 134 2e-28
ref|XP_008355160.1| PREDICTED: putative ribonuclease H protein A... 133 3e-28
ref|XP_006492639.1| PREDICTED: putative ribonuclease H protein A... 133 3e-28
>gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]
Length = 1836
Score = 179 bits (454), Expect = 5e-42
Identities = 117/377 (31%), Positives = 185/377 (49%), Gaps = 9/377 (2%)
Frame = -3
Query: 1105 NIFVPAKIQSNIKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDNGNW 926
N+ P+ I ++I+A+PLP + DK WPHS G V++ S ++ + S + ++
Sbjct: 1453 NLLPPSTI-NDIRAVPLPAANQQVDKLTWPHSNSGLVSVSSAFSFI----SGHDDSDNSY 1507
Query: 925 KSLWRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCER 746
+W++ +K F+W + L S R RG+ CP C ETI HLF +C+
Sbjct: 1508 AWIWKLPCVEKVKLFIWKIMENGLLTNSERRRRGLLEAATCPSCGTNDETIDHLFRSCDV 1567
Query: 745 VAPIWEALT------YAFNTTISGSHISLDWILKILNSNGESNP-VEWKILIPFILWSIW 587
WEA Y+F+ ++ W+ K SN + + W+++ P+ILW++W
Sbjct: 1568 AVNCWEAAAPPTAFMYSFHLPVTV------WMEKSCASNQTNGRGISWRLIFPYILWNMW 1621
Query: 586 CARNNVIFNLKPFDWREIIQDSYNSAYEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVVKL 407
RNN +FN + I++ + A E Q P + + + W PP G VK+
Sbjct: 1622 KGRNNQVFNNVCTNGNAIVKIAEQEASE-AQRFLLPHAGPLRARQLWIPWSPPQPGFVKM 1680
Query: 406 NVDGASNSFDGAGSAG-ILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIK 230
N DGA + G SAG +LR+ G ++ F ++ H + LAELW R+G+ ++ N G
Sbjct: 1681 NSDGAMKANSGMASAGGLLRDHMGNWIVGFSTNIGHTNSFLAELWGFREGLVIAKNRGYN 1740
Query: 229 NLMVESD*KLTVD-LCNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLA 53
+++ E+D + V L N+ A G + F LL D K + F H +REGN AD LA
Sbjct: 1741 HIIAETDSEAVVQVLINDRAVGPFDF-TLLADCKSLIHQFQECRIMHTFREGNQCADHLA 1799
Query: 52 KKASTEGLSGTRIHDLP 2
+ SGT D P
Sbjct: 1800 NIGQSI-TSGTTWWDHP 1815
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 157 bits (397), Expect = 2e-35
Identities = 103/368 (27%), Positives = 169/368 (45%), Gaps = 3/368 (0%)
Frame = -3
Query: 1096 VPAKIQSNIKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDNGNWKSL 917
+P + ++A P+ D WPHS G VT+ S Y+++ + D+ + +
Sbjct: 985 LPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDG----DDRSHDWI 1040
Query: 916 WRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAP 737
WR IK F+W + +V + RG+ CP+C + ET+ HLF C
Sbjct: 1041 WRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEA 1100
Query: 736 IWEALTYAFNTTISGSHISLDWILKILNSNGESN--PVEWKILIPFILWSIWCARNNVIF 563
W++ T + +H+ + +K S+ + + W ++ P+ILW++W ARN ++F
Sbjct: 1101 CWDSAVPPL-TFQTSNHLHMHSWMKAACSSQQKDGYSTNWSLIFPYILWNLWKARNRLVF 1159
Query: 562 NLKPFDWREIIQDSYNSAYEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGASNS 383
+ +I+ S+ + E + + V W PP G KLN DGA S
Sbjct: 1160 DNNITAPSDILNRSFMESSE-ARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGACKS 1218
Query: 382 FDGAGSA-GILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD* 206
SA G+LR +G +VA + ++ + LAELW +R+G+ L+ N G L+ E+D
Sbjct: 1219 HSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDS 1278
Query: 205 KLTVDLCNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKKASTEGLS 26
+ V + + IL++D K + F I H REGN AD LA +
Sbjct: 1279 EAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLANLGQSSSW- 1337
Query: 25 GTRIHDLP 2
GT I + P
Sbjct: 1338 GTTILERP 1345
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 157 bits (396), Expect = 3e-35
Identities = 103/368 (27%), Positives = 169/368 (45%), Gaps = 3/368 (0%)
Frame = -3
Query: 1096 VPAKIQSNIKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDNGNWKSL 917
+P + ++A P+ D WPHS G VT+ S Y+++ + D+ + +
Sbjct: 985 LPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDG----DDRSHDWI 1040
Query: 916 WRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAP 737
WR IK F+W + +V + RG+ CP+C + ET+ HLF C
Sbjct: 1041 WRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEA 1100
Query: 736 IWEALTYAFNTTISGSHISLDWILKILNSNGESN--PVEWKILIPFILWSIWCARNNVIF 563
W++ T + +H+ + +K S+ + + W ++ P+ILW++W ARN ++F
Sbjct: 1101 CWDSAVPPL-TFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNRLVF 1159
Query: 562 NLKPFDWREIIQDSYNSAYEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGASNS 383
+ +I+ S+ + E + + V W PP G KLN DGA S
Sbjct: 1160 DNNITAPSDILNRSFMESSE-ARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGACKS 1218
Query: 382 FDGAGSA-GILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD* 206
SA G+LR +G +VA + ++ + LAELW +R+G+ L+ N G L+ E+D
Sbjct: 1219 HSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDS 1278
Query: 205 KLTVDLCNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKKASTEGLS 26
+ V + + IL++D K + F I H REGN AD LA +
Sbjct: 1279 EAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLANLGQSSSW- 1337
Query: 25 GTRIHDLP 2
GT I + P
Sbjct: 1338 GTTILERP 1345
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 156 bits (395), Expect = 3e-35
Identities = 103/368 (27%), Positives = 168/368 (45%), Gaps = 3/368 (0%)
Frame = -3
Query: 1096 VPAKIQSNIKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDNGNWKSL 917
+P + ++A P+ D WPHS G VT+ S Y+++ + D + +
Sbjct: 1517 LPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVTVSSAYSLIAGHDG----DGRSHDWI 1572
Query: 916 WRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAP 737
WR IK F+W + +V + RG+ CP+C + ET+ HLF C
Sbjct: 1573 WRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEA 1632
Query: 736 IWEALTYAFNTTISGSHISLDWILKILNSNGESN--PVEWKILIPFILWSIWCARNNVIF 563
W++ T + +H+ + +K S+ + + W ++ P+ILW++W ARN ++F
Sbjct: 1633 CWDSAVPPL-TFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNRLVF 1691
Query: 562 NLKPFDWREIIQDSYNSAYEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGASNS 383
+ +I+ S+ + E + + V W PP G KLN DGA S
Sbjct: 1692 DNNITAPSDILNRSFMESSE-ARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGACKS 1750
Query: 382 FDGAGSA-GILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD* 206
SA G+LR +G +VA + ++ + LAELW +R+G+ L+ N G L+ E+D
Sbjct: 1751 HSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDS 1810
Query: 205 KLTVDLCNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKKASTEGLS 26
+ V + + IL++D K + F I H REGN AD LA +
Sbjct: 1811 EAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLANLGQSSSW- 1869
Query: 25 GTRIHDLP 2
GT I + P
Sbjct: 1870 GTTILERP 1877
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 154 bits (389), Expect = 2e-34
Identities = 100/337 (29%), Positives = 163/337 (48%), Gaps = 9/337 (2%)
Frame = -3
Query: 1033 DKQIWPHSRDGQVTIKSCY--NMLVQQNSNTSVDNGN----WKSLWRIKYPAHIKHFLWL 872
D+ +W S++GQ T++S Y +L + + S G W+ +W+ K P +K F W
Sbjct: 1010 DQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWK 1069
Query: 871 MAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAPIWEALTYAFNTTISG 692
H V + +R RGM ID CP C + ET HL + C+ + W +T
Sbjct: 1070 AIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIE 1129
Query: 691 SHISLDWILKILNSNGESNPVEWKILIPFILWSIWCARNNVIFNLKPFDWREIIQDSYNS 512
+ W+ +L+++ ++ EW L I W+IW RN +F K ++E+++ +
Sbjct: 1130 AGSFRIWVESLLDTHKDT---EWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRG 1186
Query: 511 AYEFVQAIGQPIIDSSQPSMIHVN-WLPPPDGVVKLNVDGASNSFDGAGSAGILREADGG 335
EF + + H N W PP G+VKLNVD A G G G++R+A+G
Sbjct: 1187 VMEFEEECAH--TSPVETLNTHENGWSVPPVGMVKLNVDAAVFKHVGIGMGGVVRDAEGD 1244
Query: 334 -YVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD-*KLTVDLCNNCADGSW 161
+A+ C +AE ++R G+K++ G +NL+VE D KL + L +D +
Sbjct: 1245 VLLATCCGGWAMEDPAMAEACSLRYGLKVAYEAGFRNLVVEMDCKKLFLQLRGKASDVTP 1304
Query: 160 FFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAK 50
F + + DI Y++S + F H R N A +LA+
Sbjct: 1305 FGRV-VDDILYLASKCSNVVFEHVKRHCNKVAHLLAQ 1340
>ref|XP_008372905.1| PREDICTED: uncharacterized protein LOC103436258 [Malus domestica]
Length = 1222
Score = 146 bits (369), Expect = 3e-32
Identities = 99/351 (28%), Positives = 164/351 (46%), Gaps = 18/351 (5%)
Frame = -3
Query: 1033 DKQIWPHSRDGQVTIKSCYNMLVQQNSNT---------SVDNGNWKSLWRIKYPAHIKHF 881
D+ IW +R+G+ ++KS Y L + + S+ WK +W++ P I+HF
Sbjct: 847 DRLIWAVNRNGKYSVKSGYRWLQVRYIDVRDHRMPVVRSISKTLWKCIWQLAVPQKIRHF 906
Query: 880 LWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAPIWEALTYAFNTT 701
LW+ H L R + CP+CQ A ET+ H+F C VA +W +
Sbjct: 907 LWVSLHLGLPTGKALCTRRLSPFPSCPLCQSADETVEHVFLRCSWVAAVWFGGALNYKVD 966
Query: 700 ISGSHISLDWILKILNSN-GESNPVEW-KILIPFILWSIWCARNNVIFNLKPFDWREIIQ 527
+G W+ + +SN G S +W + + F W IW AR + +FN P + ++I
Sbjct: 967 AAGIDSWARWLQTVFSSNWGSSTNRQWFQAYVSFSCWFIWKARCDFVFNQVPINPSKVIF 1026
Query: 526 DSYNSAYEFVQA-----IGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGASNSFDGAGSA 362
+ F+ A I +P+ S + + V W PP VK+NVD + + G A
Sbjct: 1027 SLSTAFGNFLLAVSSLGIARPVSVSQEE--VVVRWCPPASPFVKINVDASWSKSSWMGFA 1084
Query: 361 GILREADGG-YVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD*KLTVDLC 185
G++ DGG + A+ + ++ +AE +A+ G +L ++G ++++ESD +
Sbjct: 1085 GVVARQDGGRFRAAVRSSVLAPSSLVAESFAILRGCELGASMGFSSVIIESDSLQAISYL 1144
Query: 184 N-NCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKKASTE 35
N + +GSW +L + + S F + R N AADVLA TE
Sbjct: 1145 NGSLENGSWEAFPILARAQRLGSAFQNCRWSWVPRSANLAADVLASAGLTE 1195
>ref|XP_008244843.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 390
Score = 146 bits (368), Expect = 5e-32
Identities = 93/301 (30%), Positives = 155/301 (51%), Gaps = 6/301 (1%)
Frame = -3
Query: 934 GNWKSLWRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYT 755
G K +W++ P +K F WL+ + VR+ L +I CP CQ ETI HLF
Sbjct: 91 GLLKKVWKLNIPPKVKIFAWLLIRKRLQVRARLHRFMQHISPLCPFCQSLPETIQHLFMD 150
Query: 754 CERVAPIWEALTYAFNTTISGSHISLDWILKILNSNGESN--PVEWKILIPFILWSIWCA 581
C+ +W AL+ S +W++ + + +S+ P+ +LI W IW A
Sbjct: 151 CQFAKDVW-ALSIDLMPLPSQIGDLYNWLMSLSTTTTKSDLDPLSKALLI---CWQIWEA 206
Query: 580 RNNVIFNLKPFDWREIIQDSYNSA----YEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVV 413
RNNV+F+ D + + + +++A +F + I S+ SMI + W PPP G +
Sbjct: 207 RNNVVFH----DSKATLANCFHAAACVGLDFWRLNSMTICGSTD-SMI-IKWHPPPTGWI 260
Query: 412 KLNVDGASNSFDGAGSAGILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGI 233
K+N DG+ + A + ++R+ +G + + ++ N+ N+AE A+RDG+ +++ G
Sbjct: 261 KVNFDGSLMN-SHASTGFVIRDCEGHVLVAASNNIGKNSINVAECLALRDGLAAALDRGW 319
Query: 232 KNLMVESD*KLTVDLCNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLA 53
+++E D KL +D AD W ++QDI +SSF +I F H +RE N D +A
Sbjct: 320 DQIVIEWDCKLVIDSILGKADPPWCIKQIIQDIWALSSFATSIRFQHVFREANFTVDTVA 379
Query: 52 K 50
K
Sbjct: 380 K 380
>ref|XP_008242678.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 390
Score = 145 bits (367), Expect = 6e-32
Identities = 90/301 (29%), Positives = 149/301 (49%), Gaps = 8/301 (2%)
Frame = -3
Query: 1066 AIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDNGNWKSLWRIKYPAHIK 887
++P+ + + D QIW S +G ++KS Y++ S + WKSLW + P ++
Sbjct: 68 SVPVGFLGSLPDTQIWKGSTNGDFSVKSAYSLFF---GGCSTPDSCWKSLWSLNVPPKLQ 124
Query: 886 HFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAPIWEALTYAFN 707
+F+WL + GK L R + D C C +ET+ H+ CER W A+ A
Sbjct: 125 YFMWLASQGKILSNDQRVRRQLASDPSCGFCSWPTETVLHILRDCERARSTWNAILPA-- 182
Query: 706 TTISGSHISLD---WI-LKILNSNGESNPVEWKILIPFILWSIWCARNNVIFNLKP---F 548
+ LD W+ + +L+ + V W + F W +WC RN +F + F
Sbjct: 183 --CAHRFFHLDAQPWMKVNMLSREKWNGDVPWSTVFVFTCWHLWCWRNKHVFQNEDTILF 240
Query: 547 DWREIIQDSYNSAYEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGASNSFDGA- 371
R++I +A E++++ + ++ IHV W P G KLNVDG+ S G
Sbjct: 241 SPRQVI---CGAAQEWIKSTSNLTVKVNK-VQIHVAWELPGPGQFKLNVDGSRRSVTGCI 296
Query: 370 GSAGILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD*KLTVD 191
G+ G++R+ GG+V+ F +L AE+W + G+KL+I GI +L++E D + V+
Sbjct: 297 GAGGVIRDPFGGWVSGFAINLGKGQVLEAEIWGLFFGLKLAIEKGISSLIIEMDSAIAVN 356
Query: 190 L 188
L
Sbjct: 357 L 357
>ref|XP_006469101.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 684
Score = 143 bits (361), Expect = 3e-31
Identities = 90/305 (29%), Positives = 143/305 (46%), Gaps = 3/305 (0%)
Frame = -3
Query: 1114 SPFNIFVPAKIQSNIKAIPLPYTHHVN-DKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVD 938
S F P + I ++ +P H + DK W + G T++S Y L Q +SN D
Sbjct: 321 SAFEHLFPNSVLLQIASV-MPPNHLLGVDKLFWRYEPRGNFTVRSAYEALCQLDSN---D 376
Query: 937 NGN-WKSLWRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLF 761
G WK W K P ++ FLW H K + L R + I C C E + H+
Sbjct: 377 TGTAWKLAWTWKGPQAVRIFLWQALHAKLKTKEELSRRHIPISIGCERCGAPIEDVIHVL 436
Query: 760 YTCERVAPIWEALTYAFNTTISGSHISLDWILKILNSNGE-SNPVEWKILIPFILWSIWC 584
C+ + +W L A N DWI L + + ++P W+ + +W +W
Sbjct: 437 RDCQCIMRVWLRLVPARNHLSFFQSTLRDWITANLQNKWKIASPSTWECIFGVAIWRLWF 496
Query: 583 ARNNVIFNLKPFDWREIIQDSYNSAYEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVVKLN 404
RN+ + + K D I D A E + I + I + W+PPP KLN
Sbjct: 497 WRNHFMVDGKLTDSSTIYLDITARANEIHKLNNSHISQQPRRKEIFIGWIPPPWPWCKLN 556
Query: 403 VDGASNSFDGAGSAGILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNL 224
DG+ +GAG+ GILR++ G +++ FC ++ ++ +AELW + G++++ + GIK L
Sbjct: 557 TDGSCRKSEGAGAGGILRDSVGHWISGFCLNIGESSVLMAELWGLYQGLRIAWDTGIKCL 616
Query: 223 MVESD 209
+VE D
Sbjct: 617 LVEVD 621
>ref|XP_008237302.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 394
Score = 141 bits (355), Expect = 1e-30
Identities = 96/365 (26%), Positives = 168/365 (46%), Gaps = 17/365 (4%)
Frame = -3
Query: 1096 VPAKIQSNIKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDNGNWKSL 917
+P ++ + + P+ + + D QIW S +G ++KS YNM+ + ++ + V W L
Sbjct: 8 LPDELVQRVISCPVGFNSGLQDAQIWKFSSNGIFSVKSAYNMVFEGSTCSDVA---WTFL 64
Query: 916 WRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAP 737
W+++ P + F WL+ GK L R + +D C C E+I H+ C +
Sbjct: 65 WKLRIPPKLHIFFWLVFQGKILSNEQRVRRQLSLDASCGSCHWPMESILHILRDCVKAKK 124
Query: 736 IWEALTYAFNTTISGSHISLD---WI-LKILNSNGESNPVEWKILIPFILWSIWCARNNV 569
+W AL N++ S ++D W+ + +++ ++ + W ++ F W IW RN+
Sbjct: 125 VWNAL---LNSSQSARFFTMDFQPWLRVNLMSKIVWADGIPWNLVFVFTCWYIWKWRNHY 181
Query: 568 IFNLKPFDWREIIQDSYNSAYEFVQAIGQPIIDSSQPSMIHVN----------WLPPPDG 419
+F+ + A++ +Q I + + + S + W PPP G
Sbjct: 182 VFH-----------GDEDLAFDSIQIITAAVKEWFKTSNVSFTKCAKVEAWFAWEPPPAG 230
Query: 418 VVKLNVDGASNSFDG-AGSAGILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSIN 242
V KLNVDG+ G G+ G+LR+ G + + F +L AELW + G++++I
Sbjct: 231 VFKLNVDGSRKVASGHIGAGGVLRDVSGDWCSGFAINLGKGQILEAELWGLFFGLRMAIA 290
Query: 241 LGIKNLMVESD*KLTVDLCNNCADGSWFFDI--LLQDIKYMSSFFDTISFHHQYREGNSA 68
G NL+VE D + + L D + L+ + + S H +RE NS
Sbjct: 291 KGFNNLIVEMDSAVAIQLVQQ-HDSLTVHPLASLVSSCWQLMQQLEKCSMRHIFREKNSV 349
Query: 67 ADVLA 53
AD LA
Sbjct: 350 ADRLA 354
>ref|XP_009151561.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 1204
Score = 140 bits (352), Expect = 3e-30
Identities = 97/361 (26%), Positives = 161/361 (44%), Gaps = 3/361 (0%)
Frame = -3
Query: 1117 LSPFNIFVPAKIQSNIKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVD 938
LS + ++P + + A+ + V D+ W +GQ T+K+ Y+++ + N+
Sbjct: 809 LSRISPYIPDERRLERVAVVVDTVSGVKDRLAWGEVPNGQFTVKTAYDLITRDNTPRQQM 868
Query: 937 NGNWKSLWRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFY 758
+KS+WR+ P ++ FLWL+ + + + R + + C +C+ ETI H+
Sbjct: 869 ENLFKSMWRVVAPERVRVFLWLVGNQAIMTNAERYRRHLSGTDVCQVCKGGVETILHVLR 928
Query: 757 TCERVAPIWEALTYAFNTTISGSHISLDWILKILNSNGESNPVEWKILIPFILWSIWCAR 578
C + IW + S L+W+ + L N N + W +W W R
Sbjct: 929 DCPAMEGIWSRFVPSTKRQAFFSMPLLEWLYRNLYDNDAQNEIPWATTFALGVWWGWKWR 988
Query: 577 NNVIFNLKPFDWREIIQDSYNSAYEFVQA--IGQPIIDSSQPSMIHVNWLPPPDGVVKLN 404
+F WR+ ++ N A E ++A + Q I V W PP G +KLN
Sbjct: 989 CGNVFGDNRL-WRDRVKFLRNLAREVMRAKKTEEESRARVQRVEIMVGWTPPRGGWMKLN 1047
Query: 403 VDGASNSFDGAGSA-GILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKN 227
DGAS+ G SA G+LR+ +G + F ++ + LAELW V G+ ++ GI+
Sbjct: 1048 TDGASHGNPGLASAGGVLRDGEGEWCGGFALNIGRCSAPLAELWGVYYGLVIAWEKGIRR 1107
Query: 226 LMVESD*KLTVDLCNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKK 47
L VE D K+ V + + L++ + + H YRE N AD LA
Sbjct: 1108 LEVEVDSKMVVGFLTTGIEDTHPLSFLVRLCHGFLTRDWLVRIVHVYREANRLADGLANL 1167
Query: 46 A 44
A
Sbjct: 1168 A 1168
>ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 782
Score = 137 bits (346), Expect = 2e-29
Identities = 111/416 (26%), Positives = 187/416 (44%), Gaps = 7/416 (1%)
Frame = -3
Query: 1228 SDRNLSSR*LLN-TAGFLVGFDEN*YSREQMILLKTGILSPFNIFVPAKIQSNIKAIPLP 1052
+DR LS++ L + T G L E+ RE ++ L+ FV + + + A+ +
Sbjct: 349 TDRWLSNQPLSSVTIGELPEGYEDVTVREMWVVGGGWDLAHIAPFVTDETRLELAAVVVD 408
Query: 1051 YTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDNGNWKSLWRIKYPAHIKHFLWL 872
+ D+ W +++GQ+T+KS Y ++ + ++ ++ +W + P +K FLWL
Sbjct: 409 TVNDSEDRLAWSQTKNGQLTVKSAYALITRDDAPRPNMEYLFRRMWHVVPPERVKMFLWL 468
Query: 871 MAHGKTLVRSTLRYRG-MYIDERCPICQKASETISHLFYTCERVAPIWEALTYAFNTTIS 695
+ + + ++ + RYR + + C +C+ ETI H+ C + IW+ A
Sbjct: 469 VGN-QAIMTNAERYRWHLSGTDVCQVCKGGIETILHVLRDCPAMRGIWDLFVPAVKRQTF 527
Query: 694 GSHISLDWILKILNSNGESNPVEWKILIPFILWSIWCARNNVIFNLKPFDWREIIQDSYN 515
S L+W+ K L+ NG + W +W W R IF K WR + N
Sbjct: 528 FSMPLLEWLYKNLSDNGTGREIPWPTTFALAVWWGWKWRCGNIFG-KNSLWRNRVGFLRN 586
Query: 514 SAYEFVQA----IGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGASNSFDGAGSA-GILR 350
A E + A G P +D + I V W PP G +KLN DG+S+ G +A G+LR
Sbjct: 587 LAKEVMLANEAEKGNPNVD--HRTEIMVGWAPPQSGWMKLNTDGSSHGNPGPETAGGVLR 644
Query: 349 EADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD*KLTVDLCNNCAD 170
+G + F ++ LAELW V G ++ GI+ L +E D ++ V+
Sbjct: 645 NGEGEWCGGFALNIERCGALLAELWRVYYGFVVAWEKGIRRLELEVDSQVVVEFLTTGIG 704
Query: 169 GSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKKASTEGLSGTRIHDLP 2
+ L++ + + H YRE N AD LA A + R+ + P
Sbjct: 705 DTHSLSFLVRMCHGLLKKDWLVHIVHVYREANRLADCLANLAFSLPFGFHRLDETP 760
>ref|XP_010687479.1| PREDICTED: uncharacterized protein LOC104901585 [Beta vulgaris subsp.
vulgaris]
Length = 485
Score = 137 bits (345), Expect = 2e-29
Identities = 94/357 (26%), Positives = 169/357 (47%), Gaps = 9/357 (2%)
Frame = -3
Query: 1072 IKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQN------SNTSVDNGNWKSLWR 911
IK IPLP + D +W H+++GQ T++S Y +++ ++ S+T V+ W+ L
Sbjct: 114 IKNIPLPL-RDMEDSWMWKHTKNGQYTVRSAYFLMLMKDRRNSPSSSTGVNRAIWQKLLG 172
Query: 910 IKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAPIW 731
+ I+ F W VR+ L RG+ I++ CP C + ET+ H+ C +W
Sbjct: 173 VNIQPKIRMFGWRAIKNGVAVRANLARRGVEIEKMCPRCGEFDETLEHMLLFCPESRKVW 232
Query: 730 EALTYAFNTTISGSHISLDWILKILNSNGESNPVEWKILIPFILWSIWCARNNVIFNLKP 551
+ GS +W+ ++ + + +W L F+ W+IW +N F K
Sbjct: 233 YYSPLRVDVETVGSGRFHEWVERLAAAQLKD---DWWALFWFLCWNIWLGQNVWTFEGKK 289
Query: 550 FDWREIIQDSYNSAYEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGASNSFDGA 371
++ ++++ + E+ + Q + V W P +G KLN D A + +
Sbjct: 290 REFVDVVERAVRGVLEY-DKVAQEGDKVAAVEADTVRWKAPREGDYKLNTDAAMFADNQV 348
Query: 370 GSAGILREADGGYVASFCRHLFHNTN-NLAELWAVRDGMKLSINLGIKNLMVESD-*KLT 197
G ++R+ G +A+ C + ++AE R G+++++ G ++L++E D KL
Sbjct: 349 GMGAVVRDFSGDVLAAMCCKMRGGDEVDIAEALCARRGLQIAMEAGFRSLVLEVDNLKLF 408
Query: 196 VDLCNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKKA-STEGL 29
L N + S F ++QDI+ + ++SF H R+GN A LAK S +GL
Sbjct: 409 SYLSRNKREAS-PFGFIVQDIQRLVHQCSSVSFSHTRRKGNEVAHRLAKMCNSIDGL 464
>ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 1011
Score = 136 bits (343), Expect = 4e-29
Identities = 108/415 (26%), Positives = 182/415 (43%), Gaps = 6/415 (1%)
Frame = -3
Query: 1228 SDRNLSSR*LLN-TAGFLVGFDEN*YSREQMILLKTGILSPFNIFVPAKIQSNIKAIPLP 1052
+DR LS++ L + T G L E+ RE ++ L+ FV + + + A+ +
Sbjct: 578 TDRWLSNQPLSSVTIGELPEGYEDVTVREMWVVGGGWDLAHIAPFVTDETRLELAAVVVD 637
Query: 1051 YTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDNGNWKSLWRIKYPAHIKHFLWL 872
+ D+ W + +GQ T+KS Y ++ + ++ ++ +W + P ++ FLWL
Sbjct: 638 TVNDSEDRLAWSQTNNGQFTVKSAYALITRDDAPRPNMEYLFRRMWHVVAPERVRMFLWL 697
Query: 871 MAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAPIWEALTYAFNTTISG 692
+ + + + R + + C +C+ ETI H+ C + IW+ A
Sbjct: 698 VGNQAIMTNAERYRRHLSGTDVCQVCKGGIETILHVLRDCPAMRGIWDRFVPAVKRQTFF 757
Query: 691 SHISLDWILKILNSNGESNPVEWKILIPFILWSIWCARNNVIFNLKPFDWREIIQDSYNS 512
S L+W+ K L+ NG + + W +W W R IF K WR+ + N
Sbjct: 758 SMPLLEWLYKNLSDNGTGSEIPWPTTFALAVWWGWKWRCGNIFG-KNSLWRDRVGFLRNL 816
Query: 511 AYEFVQA----IGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGASNSFDGAGSA-GILRE 347
A E + A G +D M V W PP G +KLN DG+S+ GA +A G+LR
Sbjct: 817 AKEVMSANEAEKGNSNVDHRTERM--VGWAPPRSGWMKLNTDGSSHGNPGAATAGGVLRN 874
Query: 346 ADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD*KLTVDLCNNCADG 167
+G + F ++ LAELW V G+ + GI+ L +E D ++ V+
Sbjct: 875 GEGEWCGGFALNIGRCGALLAELWGVYYGLVAAWEKGIRRLELEVDSQVVVEFLTIGIGD 934
Query: 166 SWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKKASTEGLSGTRIHDLP 2
+ L++ + + H YRE N AD LA A + R+ + P
Sbjct: 935 THSLSFLVRMCHGLLKKDWLVHIVHVYREANRLADGLANLAFSLPFGFHRLDETP 989
>ref|XP_008245529.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103343662
[Prunus mume]
Length = 1725
Score = 136 bits (343), Expect = 4e-29
Identities = 120/390 (30%), Positives = 176/390 (45%), Gaps = 19/390 (4%)
Frame = -3
Query: 1156 YSREQMILLKTGILSPFNIFVPAKIQSNIKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCY 977
+SRE + G+ SP AKI IKA+PL D+ IWP ++ G T+KS Y
Sbjct: 993 HSREWNLEAIGGMFSPN----AAKI---IKAMPLGDGWE-KDRLIWPLNQTGSYTVKSGY 1044
Query: 976 NMLVQQNSNTSV--------DNGNWKSLWRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGM 821
NM+ + +TSV D WK +W + + +F W + G R L R +
Sbjct: 1045 NMIHMAHLDTSVRPSSSRILDKALWKLIWGSQMVPKLMNFWWRLVRGCLPTRDALFRRHL 1104
Query: 820 YIDERCPICQKASETISHLFYTCERVAPIW--EALTYAFNTTISGSHISLDWILKILN-S 650
CPIC + E++ HLF C V P+W L Y N S DW+++IL S
Sbjct: 1105 GTSPLCPICGEFPESVEHLFLLCNWVRPVWFGGPLNYRINRQSITS--MSDWLMQILKFS 1162
Query: 649 NGESNPVEWKI-LIPFILWSIWCARNNVIFNLKPFDWREIIQDSYNSAYEFVQAIGQPII 473
G +W I I + WSIW +R + IF+ R + + +F +G P
Sbjct: 1163 QGLGYDRKWLISQIFYSCWSIWKSRCSAIFDDISVCPRNTLLVAKKLMNDF-NLVGCPHG 1221
Query: 472 DSSQPSMIH-----VNWLPPPDGVVKLNVDGASNSFD-GAGSAGILREADGGYVASFCRH 311
D+ I V W PPP V K+N+D + S AG ++R + G ++ C
Sbjct: 1222 DAILEEDIDDGHRVVRWSPPPTSVYKINIDASWVSCTLQAGLGVVVRNSAGIFMGGCCGP 1281
Query: 310 LFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD*K-LTVDLCNNCADGSWFFDILLQDI 134
++ AE A G+KL++ G N++ ESD K L + N G W +L I
Sbjct: 1282 RLASSAIEAEAHAALKGVKLAVERGFPNVVFESDSKELVQSVKGNILKGRWMIYPILSAI 1341
Query: 133 KYMSSFFDTISFHHQYREGNSAADVLAKKA 44
+ S F + S+H R N AAD A++A
Sbjct: 1342 RRHCSSFISCSWHWVPRGANRAADAAAQRA 1371
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl
transferase, Ribonuclease H fold [Medicago truncatula]
Length = 729
Score = 135 bits (341), Expect = 6e-29
Identities = 89/300 (29%), Positives = 137/300 (45%), Gaps = 5/300 (1%)
Frame = -3
Query: 1084 IQSNIKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDNGNWKSLWRIK 905
I + I A+P P D W + + T++S YN+ Q N G+WK+LW K
Sbjct: 415 IVNQILALPTPSDFDGPDTIGWGGTNTLKFTVQSAYNL---QQENPFAVGGDWKTLWNWK 471
Query: 904 YPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAPIWEA 725
P I+ F+WL AHG+ L G+ I CP C + ET+ H+ C +W
Sbjct: 472 GPHRIQTFIWLAAHGRILTNYRRSKWGVGISPTCPCCAREDETVIHVLRDCVHSTQVWLR 531
Query: 724 LTYAFNTTISGSHISLDWILKILNSNG-ESNPVEWKILIPFILWSIWCARNNVIFNL--- 557
L T S +W+ LN G NP W+ W +W RN IF +
Sbjct: 532 LIPHNYITNFFSFDCREWVFNNLNKKGIGDNPATWQTTFMTTCWYLWNWRNKSIFEIGFQ 591
Query: 556 KPFDWREIIQDSYNSAYEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGA-SNSF 380
+P + +IQ + + + + S Q I++ W+ PP G VKLN DGA S
Sbjct: 592 RPSNPTLVIQKFTREIEDNTKLVHK---SSHQKETIYIGWMRPPFGWVKLNCDGAWKGSG 648
Query: 379 DGAGSAGILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD*KL 200
AG G+LR++DG ++ + + + AE+W + G+ ++ +L+VESD K+
Sbjct: 649 TLAGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMWGMYLGLDMAWRENTTHLIVESDSKI 708
>ref|XP_008367096.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 924
Score = 134 bits (337), Expect = 2e-28
Identities = 94/362 (25%), Positives = 164/362 (45%), Gaps = 16/362 (4%)
Frame = -3
Query: 1039 VNDKQIWPHSRDGQVTIKSCYNMLVQQ---------NSNTSVDNGNWKSLWRIKYPAHIK 887
++D+ +WP R G T+KS Y+ + + +S+ +V WK++W + P ++
Sbjct: 547 LDDRLVWPFDRXGLYTVKSGYHCVHAKREQRVNFGSSSSVTVPGKLWKAIWNLNTPPKLR 606
Query: 886 HFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAPIWEALTYAFN 707
FLW H + L R + CPICQ ETI HLF C V IW +
Sbjct: 607 VFLWKTVHNALATLAGLFRRLVAPSPLCPICQIHEETIEHLFLLCPWVEVIWFGGMLSHR 666
Query: 706 TTISGSHISLDWILKILNSNGESNPVEWKIL--IPFILWSIWCARNNVIFNLKPFDWREI 533
S ++W++ I N+ S ++L + F W IW +R N +F + R +
Sbjct: 667 IIRSSISSWVNWLVNITNTTLNSKAEMXRVLSYVAFTCWHIWKSRCNFLFQNGSINPRNV 726
Query: 532 IQDSYNSAYEFVQAIGQPIIDSSQP---SMIHVNWLPPPDGVVKLNVDGASNSFDGAGSA 362
+ S F +A +I S P + + W PP VK+NVD + +G +
Sbjct: 727 LAAIDTSVSAFSEASRNKVIRPSMPNPAAQVPARWCLPPPPFVKINVDASWEXGTXSGFS 786
Query: 361 G-ILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVESD*KLTVD-L 188
G ++R++ G ++A+ ++ + E A+R G +L + +G +++ESD + ++ L
Sbjct: 787 GVVVRDSAGTFIAARRGCFAAHSAAVXEAIAIRHGCELGVAMGFNLIVIESDSQDSISYL 846
Query: 187 CNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKKASTEGLSGTRIHD 8
++G W +L K + + F + R N AAD LA + + E T ++
Sbjct: 847 MGKTSNGRWEAFPVLTKCKLIGNSFQDCRWSWIPRSANLAADCLASRRNREMCDFTWVNR 906
Query: 7 LP 2
P
Sbjct: 907 PP 908
>ref|XP_008352462.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 573
Score = 134 bits (336), Expect = 2e-28
Identities = 96/352 (27%), Positives = 159/352 (45%), Gaps = 19/352 (5%)
Frame = -3
Query: 1033 DKQIWPHSRDGQVTIKSCYNMLVQQNSNTS---------VDNGNWKSLWRIKYPAHIKHF 881
D+ +W S++G+ +++S Y+ L ++ V W+ +W ++ P + HF
Sbjct: 198 DRLVWDVSKNGRYSVRSGYHXLQSRSVGLXDQRXLGARLVXRQLWRMVWNLRGPHKLXHF 257
Query: 880 LWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCERVAPIWEALTYAFNTT 701
WL H R L R CPIC E++ HLF C VA IW +
Sbjct: 258 FWLSLHQALPTRXXLFRRRSSPSPVCPICLCXDESMEHLFLLCPWVAAIWFGGALNYRVA 317
Query: 700 ISGSHISLDWILKILNSN-GESNPVEW-KILIPFILWSIWCARNNVIFNLKPFDWREIIQ 527
G W+ + G S V+W + + F WSIW AR N +FN + ++
Sbjct: 318 REGITSWASWLQAVFTLXLGXSAEVKWVQSYVAFTCWSIWKARCNFVFNQVXINPMSVLX 377
Query: 526 D------SYNSAYEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGASNSFDGAGS 365
+ SY A F+Q IG+ ++ + Q ++ W+PP +K+NVD + + +G
Sbjct: 378 EXAFAVGSYWEAGGFLQ-IGRLVVPARQ--ILXPRWIPPTSXFIKINVDASWSKVSKSGF 434
Query: 364 AGILREADGGYVASFCRHLFHNTN-NLAELWAVRDGMKLSINLGIKNLMVESD*KLTVD- 191
A ++ A+GG + R+ + N AE A+ G +L LG ++++ESD + ++
Sbjct: 435 AXVVLRAEGGSFVAAARYAILSPNVXAAEACALLRGCELGSELGCCSVILESDSRESISC 494
Query: 190 LCNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKKASTE 35
L + GSW +L +K +S F + R NS+AD LA E
Sbjct: 495 LSGDLDSGSWEAFPILARVKQLSEAFQXCRWSWVPRSANSSADFLASVGCPE 546
>ref|XP_008355160.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 573
Score = 133 bits (335), Expect = 3e-28
Identities = 113/386 (29%), Positives = 175/386 (45%), Gaps = 20/386 (5%)
Frame = -3
Query: 1099 FVPAKIQSNIKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDN----- 935
F+ + + I +P+ + + D+ IW S++G+ ++KS Y L Q + S D
Sbjct: 177 FLSEEAKLAINCLPIGDSRY-KDRLIWDASKNGRYSVKSGYRWL-QLGAIASRDQXLPRT 234
Query: 934 -----GNWKSLWRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETIS 770
W +W + P I F WL H L R + CPIC ETI
Sbjct: 235 RLIPKNLWNQVWNLPAPXKIXCFFWLSLHRGLATXXXLFRRRIAQSPCCPICNSQDETIE 294
Query: 769 HLFYTCERVAPIWEALTYAFNTTISGSHIS--LDWILKIL-NSNGESNPVEWKI-LIPFI 602
H+F C V IW A N I G IS DW++++L G +W + F
Sbjct: 295 HIFLLCPWVRAIW--FGGALNYRIDGESISSWADWLMEVLVRFPGGXEVRKWVCSYVAFT 352
Query: 601 LWSIWCARNNVIFNLKPFDWREIIQDSYNSAYEFVQAIGQPIIDSSQPSM----IHVNWL 434
+W IW R +FN P ++ ++ F +A+G +++PS I + W+
Sbjct: 353 VWFIWRTRCEFVFNQVPILPFXVLLGVSSAVGAFWEAMGWSGGGAARPSARCGPIPL-WI 411
Query: 433 PPPDGVVKLNVDGASNSFDGAGSAG-ILREADGGYVASFCRHLFHNTNNLAELWAVRDGM 257
P PD VK+NVD + + +G G ++R+A G +VA+ L + +AE + G
Sbjct: 412 PXPDSFVKINVDASWSHASRSGFXGVVIRDASGQFVAAERFALSTXSVAVAEATXLLCGC 471
Query: 256 KLSINLGIKNLMVESD*KLTVD-LCNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYRE 80
KL +LG K+++VESD K ++D L + GSW +L +K S F + R
Sbjct: 472 KLGSSLGFKSVIVESDSKESIDWLSGDVEVGSWKAFPVLTRVKVESDAFQFCRWSWVPRX 531
Query: 79 GNSAADVLAKKASTEGLSGTRIHDLP 2
N AAD LA ++ E S +H P
Sbjct: 532 ANGAADFLASRSFPEMGSRVWVHRPP 557
>ref|XP_006492639.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 569
Score = 133 bits (335), Expect = 3e-28
Identities = 98/370 (26%), Positives = 152/370 (41%), Gaps = 1/370 (0%)
Frame = -3
Query: 1108 FNIFVPAKIQSNIKAIPLPYTHHVNDKQIWPHSRDGQVTIKSCYNMLVQQNSNTSVDNGN 929
F F+P+ I I A+ P D W HS+ G+ T S Y L N D+
Sbjct: 115 FEQFLPSHIILQIAALHPPSPDKGTDSLFWAHSKSGRFTTHSAY--LALSNDTPMHDDRL 172
Query: 928 WKSLWRIKYPAHIKHFLWLMAHGKTLVRSTLRYRGMYIDERCPICQKASETISHLFYTCE 749
W+ +W K P ++ FLW + H + ++ L R + + C C +E H+ C
Sbjct: 173 WRMVWNWKGPQSVRIFLWQVFHDRLKTKAELARRHIPVSTSCDRCGAVNEDAMHVLRDCA 232
Query: 748 RVAPIWEALTYAFNTTISGSHISLDWILKILNSNGESNPVE-WKILIPFILWSIWCARNN 572
V W + A + +W+ + G V W I LW +W RN
Sbjct: 233 LVKLFWLLILPANKRQQFFNSRLQEWLRTNVGIVGRLGSVSNWAIFFGIALWRLWFWRNQ 292
Query: 571 VIFNLKPFDWREIIQDSYNSAYEFVQAIGQPIIDSSQPSMIHVNWLPPPDGVVKLNVDGA 392
FN D ++ D E + P+ ++W PP LN DGA
Sbjct: 293 FFFNQASMDPNVVLMDVLTRTAEMHKIHTHPLTTGHIRVTRWISWKPPDWPWCSLNTDGA 352
Query: 391 SNSFDGAGSAGILREADGGYVASFCRHLFHNTNNLAELWAVRDGMKLSINLGIKNLMVES 212
N + + G++R+ G +++ F + + +AELW + G++L+ N GI+ L VE
Sbjct: 353 HNRGGTSTAWGLIRDHMGRWLSGFGMMIGSCSITVAELWGLYQGLQLAWNSGIRKLQVEI 412
Query: 211 D*KLTVDLCNNCADGSWFFDILLQDIKYMSSFFDTISFHHQYREGNSAADVLAKKASTEG 32
D + L + + L+Q IK +S H YRE N AAD +A A +
Sbjct: 413 DSLCVLQLVTKPSLEINHYAPLIQAIKDYLKMDWQVSISHIYREANFAADYMANLAFSIP 472
Query: 31 LSGTRIHDLP 2
L G I+ P
Sbjct: 473 L-GLAIYHTP 481