BLASTX nr result
ID: Papaver31_contig00047328
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00047328
(536 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010272143.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-12
ref|XP_006600662.1| PREDICTED: pentatricopeptide repeat-containi... 60 1e-12
ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containi... 60 1e-12
gb|KRH03385.1| hypothetical protein GLYMA_17G094300 [Glycine max] 60 1e-12
ref|XP_013457842.1| PPR containing plant-like protein [Medicago ... 61 2e-12
ref|XP_010037616.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-12
ref|XP_009369399.1| PREDICTED: pentatricopeptide repeat-containi... 59 3e-12
ref|XP_008393129.1| PREDICTED: pentatricopeptide repeat-containi... 58 5e-12
ref|XP_010428477.1| PREDICTED: pentatricopeptide repeat-containi... 60 5e-12
ref|XP_010471579.1| PREDICTED: pentatricopeptide repeat-containi... 60 5e-12
ref|XP_010471578.1| PREDICTED: pentatricopeptide repeat-containi... 60 5e-12
ref|XP_010471577.1| PREDICTED: pentatricopeptide repeat-containi... 60 5e-12
ref|XP_010416343.1| PREDICTED: pentatricopeptide repeat-containi... 60 5e-12
ref|XP_008367545.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 58 5e-12
ref|XP_013649954.1| PREDICTED: pentatricopeptide repeat-containi... 61 6e-12
ref|XP_009106139.1| PREDICTED: pentatricopeptide repeat-containi... 61 6e-12
ref|XP_009106140.1| PREDICTED: pentatricopeptide repeat-containi... 61 6e-12
ref|XP_013649956.1| PREDICTED: pentatricopeptide repeat-containi... 61 6e-12
ref|XP_013589728.1| PREDICTED: pentatricopeptide repeat-containi... 61 7e-12
ref|XP_013589729.1| PREDICTED: pentatricopeptide repeat-containi... 61 7e-12
>ref|XP_010272143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Nelumbo nucifera]
Length = 878
Score = 58.9 bits (141), Expect(4) = 1e-12
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIELYLV 42
IS SILTY+++I+ C RGGL+WE LLGLF++ RH+GI+ LV
Sbjct: 220 ISPSILTYNTVINSCARGGLEWEGLLGLFAEMRHEGIQPDLV 261
Score = 31.2 bits (69), Expect(4) = 1e-12
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
E+FDEMP+HGV+RS F
Sbjct: 175 EIFDEMPTHGVARSVF 190
Score = 25.4 bits (54), Expect(4) = 1e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A SR LGDEAEM
Sbjct: 265 TLLCACGSRGLGDEAEM 281
Score = 22.7 bits (47), Expect(4) = 1e-12
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3
Query: 228 RGVVSFTALINA*G 187
R V SFTALINA G
Sbjct: 187 RSVFSFTALINAYG 200
>ref|XP_006600662.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like isoform X2 [Glycine max]
Length = 860
Score = 60.1 bits (144), Expect(3) = 1e-12
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
+S SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 202 VSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 239
Score = 31.6 bits (70), Expect(3) = 1e-12
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = -2
Query: 265 REVFDEMPSHGVSRSGFIH 209
REVFDEMPS+GV+R+ +++
Sbjct: 156 REVFDEMPSNGVARTVYVY 174
Score = 27.3 bits (59), Expect(3) = 1e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLLGA + R LGDEAEM
Sbjct: 247 TLLGACAHRGLGDEAEM 263
>ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like isoform X1 [Glycine max]
gi|947053931|gb|KRH03384.1| hypothetical protein
GLYMA_17G094300 [Glycine max]
Length = 859
Score = 60.1 bits (144), Expect(3) = 1e-12
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
+S SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 202 VSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 239
Score = 31.6 bits (70), Expect(3) = 1e-12
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = -2
Query: 265 REVFDEMPSHGVSRSGFIH 209
REVFDEMPS+GV+R+ +++
Sbjct: 156 REVFDEMPSNGVARTVYVY 174
Score = 27.3 bits (59), Expect(3) = 1e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLLGA + R LGDEAEM
Sbjct: 247 TLLGACAHRGLGDEAEM 263
>gb|KRH03385.1| hypothetical protein GLYMA_17G094300 [Glycine max]
Length = 748
Score = 60.1 bits (144), Expect(3) = 1e-12
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
+S SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 202 VSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 239
Score = 31.6 bits (70), Expect(3) = 1e-12
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = -2
Query: 265 REVFDEMPSHGVSRSGFIH 209
REVFDEMPS+GV+R+ +++
Sbjct: 156 REVFDEMPSNGVARTVYVY 174
Score = 27.3 bits (59), Expect(3) = 1e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLLGA + R LGDEAEM
Sbjct: 247 TLLGACAHRGLGDEAEM 263
>ref|XP_013457842.1| PPR containing plant-like protein [Medicago truncatula]
gi|657390325|gb|KEH31873.1| PPR containing plant-like
protein [Medicago truncatula]
Length = 862
Score = 60.8 bits (146), Expect(3) = 2e-12
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = -1
Query: 185 SIRFHLISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
S++ +S SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 198 SMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 241
Score = 32.0 bits (71), Expect(3) = 2e-12
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -2
Query: 265 REVFDEMPSHGVSRSGFIH 209
REVFDEMPS GV+RS F +
Sbjct: 158 REVFDEMPSQGVARSVFAY 176
Score = 25.0 bits (53), Expect(3) = 2e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDEAEM
Sbjct: 249 TLLSACAHRGLGDEAEM 265
>ref|XP_010037616.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Eucalyptus grandis]
gi|629082906|gb|KCW49351.1| hypothetical protein
EUGRSUZ_K02896 [Eucalyptus grandis]
Length = 861
Score = 58.2 bits (139), Expect(3) = 2e-12
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIELYLV 42
+S SILTY+++I+ C RGGLDWE LL LF++ RH+GI+ LV
Sbjct: 209 VSPSILTYNTVINACARGGLDWEGLLDLFAEMRHEGIQPDLV 250
Score = 32.7 bits (73), Expect(3) = 2e-12
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -2
Query: 265 REVFDEMPSHGVSRSGF 215
RE+FDEMPS+GVSRS F
Sbjct: 163 REIFDEMPSNGVSRSVF 179
Score = 26.9 bits (58), Expect(3) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A S+R LGDEAEM
Sbjct: 254 TLLSACSNRGLGDEAEM 270
>ref|XP_009369399.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Pyrus x bretschneideri]
Length = 876
Score = 58.9 bits (141), Expect(4) = 3e-12
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIELYLV 42
+S SILTY+ +++ C RGGLDWE LLGLF++ RH+GI+ LV
Sbjct: 218 VSPSILTYNIVLNACARGGLDWEGLLGLFAEMRHEGIQPDLV 259
Score = 28.5 bits (62), Expect(4) = 3e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMPS GV RS F
Sbjct: 173 EVFDEMPSQGVVRSVF 188
Score = 25.4 bits (54), Expect(4) = 3e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDEAEM
Sbjct: 263 TLLSACAGRGLGDEAEM 279
Score = 23.9 bits (50), Expect(4) = 3e-12
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = -3
Query: 228 RGVVSFTALINA---*G*YKVSLDF 163
R V S+TALINA G Y+ SL+F
Sbjct: 185 RSVFSYTALINAYGRNGQYETSLEF 209
>ref|XP_008393129.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Malus domestica]
Length = 1062
Score = 58.2 bits (139), Expect(4) = 5e-12
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -1
Query: 158 SILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIELYLV 42
SILTY+++++ C RGGLDWE LLGLF++ RH+GI+ LV
Sbjct: 407 SILTYNTVLNACARGGLDWEGLLGLFAEMRHEGIQPDLV 445
Score = 28.5 bits (62), Expect(4) = 5e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMPS GV RS F
Sbjct: 359 EVFDEMPSQGVVRSVF 374
Score = 25.4 bits (54), Expect(4) = 5e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDEAEM
Sbjct: 449 TLLSACAGRGLGDEAEM 465
Score = 23.9 bits (50), Expect(4) = 5e-12
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = -3
Query: 228 RGVVSFTALINA---*G*YKVSLDF 163
R V S+TALINA G Y+ SL+F
Sbjct: 371 RSVFSYTALINAYGRNGQYETSLEF 395
>ref|XP_010428477.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Camelina sativa]
Length = 864
Score = 60.5 bits (145), Expect(4) = 5e-12
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 208 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 245
Score = 29.3 bits (64), Expect(4) = 5e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMP GVSRS F
Sbjct: 163 EVFDEMPGQGVSRSVF 178
Score = 24.6 bits (52), Expect(4) = 5e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDEAEM
Sbjct: 253 TLLSACAIRGLGDEAEM 269
Score = 21.6 bits (44), Expect(4) = 5e-12
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 228 RGVVSFTALINA*G 187
R V S+TALINA G
Sbjct: 175 RSVFSYTALINAYG 188
>ref|XP_010471579.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X3 [Camelina sativa]
gi|727597185|ref|XP_010471580.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X4 [Camelina sativa]
Length = 863
Score = 60.5 bits (145), Expect(4) = 5e-12
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Score = 29.3 bits (64), Expect(4) = 5e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMP GVSRS F
Sbjct: 162 EVFDEMPGQGVSRSVF 177
Score = 24.6 bits (52), Expect(4) = 5e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDEAEM
Sbjct: 252 TLLSACAIRGLGDEAEM 268
Score = 21.6 bits (44), Expect(4) = 5e-12
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 228 RGVVSFTALINA*G 187
R V S+TALINA G
Sbjct: 174 RSVFSYTALINAYG 187
>ref|XP_010471578.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X2 [Camelina sativa]
Length = 863
Score = 60.5 bits (145), Expect(4) = 5e-12
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Score = 29.3 bits (64), Expect(4) = 5e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMP GVSRS F
Sbjct: 162 EVFDEMPGQGVSRSVF 177
Score = 24.6 bits (52), Expect(4) = 5e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDEAEM
Sbjct: 252 TLLSACAIRGLGDEAEM 268
Score = 21.6 bits (44), Expect(4) = 5e-12
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 228 RGVVSFTALINA*G 187
R V S+TALINA G
Sbjct: 174 RSVFSYTALINAYG 187
>ref|XP_010471577.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X1 [Camelina sativa]
Length = 863
Score = 60.5 bits (145), Expect(4) = 5e-12
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Score = 29.3 bits (64), Expect(4) = 5e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMP GVSRS F
Sbjct: 162 EVFDEMPGQGVSRSVF 177
Score = 24.6 bits (52), Expect(4) = 5e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDEAEM
Sbjct: 252 TLLSACAIRGLGDEAEM 268
Score = 21.6 bits (44), Expect(4) = 5e-12
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 228 RGVVSFTALINA*G 187
R V S+TALINA G
Sbjct: 174 RSVFSYTALINAYG 187
>ref|XP_010416343.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Camelina sativa]
Length = 863
Score = 60.5 bits (145), Expect(4) = 5e-12
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = -1
Query: 167 ISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Score = 29.3 bits (64), Expect(4) = 5e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMP GVSRS F
Sbjct: 162 EVFDEMPGQGVSRSVF 177
Score = 24.6 bits (52), Expect(4) = 5e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDEAEM
Sbjct: 252 TLLSACAIRGLGDEAEM 268
Score = 21.6 bits (44), Expect(4) = 5e-12
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 228 RGVVSFTALINA*G 187
R V S+TALINA G
Sbjct: 174 RSVFSYTALINAYG 187
>ref|XP_008367545.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g74850, chloroplastic-like, partial [Malus
domestica]
Length = 389
Score = 58.2 bits (139), Expect(4) = 5e-12
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -1
Query: 158 SILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIELYLV 42
SILTY+++++ C RGGLDWE LLGLF++ RH+GI+ LV
Sbjct: 225 SILTYNTVLNACARGGLDWEGLLGLFAEMRHEGIQPDLV 263
Score = 28.5 bits (62), Expect(4) = 5e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMPS GV RS F
Sbjct: 177 EVFDEMPSQGVVRSVF 192
Score = 25.4 bits (54), Expect(4) = 5e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDEAEM
Sbjct: 267 TLLSACAGRGLGDEAEM 283
Score = 23.9 bits (50), Expect(4) = 5e-12
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = -3
Query: 228 RGVVSFTALINA---*G*YKVSLDF 163
R V S+TALINA G Y+ SL+F
Sbjct: 189 RSVFSYTALINAYGRNGQYETSLEF 213
>ref|XP_013649954.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X1 [Brassica napus]
Length = 865
Score = 60.8 bits (146), Expect(4) = 6e-12
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = -1
Query: 200 LTLKVSIRFHLISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
L L ++ IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 196 LELLERMKSEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Score = 29.6 bits (65), Expect(4) = 6e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMPS GV+RS F
Sbjct: 162 EVFDEMPSQGVARSVF 177
Score = 23.5 bits (49), Expect(4) = 6e-12
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDE+EM
Sbjct: 252 TLLSACAIRGLGDESEM 268
Score = 21.6 bits (44), Expect(4) = 6e-12
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 228 RGVVSFTALINA*G 187
R V S+TALINA G
Sbjct: 174 RSVFSYTALINAYG 187
>ref|XP_009106139.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X1 [Brassica rapa]
Length = 865
Score = 60.8 bits (146), Expect(4) = 6e-12
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = -1
Query: 200 LTLKVSIRFHLISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
L L ++ IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 196 LELLERMKSEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Score = 29.6 bits (65), Expect(4) = 6e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMPS GV+RS F
Sbjct: 162 EVFDEMPSQGVARSVF 177
Score = 23.5 bits (49), Expect(4) = 6e-12
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDE+EM
Sbjct: 252 TLLSACAIRGLGDESEM 268
Score = 21.6 bits (44), Expect(4) = 6e-12
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 228 RGVVSFTALINA*G 187
R V S+TALINA G
Sbjct: 174 RSVFSYTALINAYG 187
>ref|XP_009106140.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X2 [Brassica rapa]
Length = 864
Score = 60.8 bits (146), Expect(4) = 6e-12
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = -1
Query: 200 LTLKVSIRFHLISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
L L ++ IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 196 LELLERMKSEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Score = 29.6 bits (65), Expect(4) = 6e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMPS GV+RS F
Sbjct: 162 EVFDEMPSQGVARSVF 177
Score = 23.5 bits (49), Expect(4) = 6e-12
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDE+EM
Sbjct: 252 TLLSACAIRGLGDESEM 268
Score = 21.6 bits (44), Expect(4) = 6e-12
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 228 RGVVSFTALINA*G 187
R V S+TALINA G
Sbjct: 174 RSVFSYTALINAYG 187
>ref|XP_013649956.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X2 [Brassica napus]
gi|674887209|emb|CDY45398.1| BnaA07g31780D [Brassica
napus]
Length = 864
Score = 60.8 bits (146), Expect(4) = 6e-12
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = -1
Query: 200 LTLKVSIRFHLISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
L L ++ IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 196 LELLERMKSEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Score = 29.6 bits (65), Expect(4) = 6e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMPS GV+RS F
Sbjct: 162 EVFDEMPSQGVARSVF 177
Score = 23.5 bits (49), Expect(4) = 6e-12
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLL A + R LGDE+EM
Sbjct: 252 TLLSACAIRGLGDESEM 268
Score = 21.6 bits (44), Expect(4) = 6e-12
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 228 RGVVSFTALINA*G 187
R V S+TALINA G
Sbjct: 174 RSVFSYTALINAYG 187
>ref|XP_013589728.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X1 [Brassica oleracea var.
oleracea]
Length = 911
Score = 60.8 bits (146), Expect(3) = 7e-12
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = -1
Query: 200 LTLKVSIRFHLISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
L L ++ IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 242 LELLERMKSEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 290
Score = 29.6 bits (65), Expect(3) = 7e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMPS GV+RS F
Sbjct: 208 EVFDEMPSQGVARSVF 223
Score = 25.8 bits (55), Expect(3) = 7e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLLGA + R LGDE+EM
Sbjct: 298 TLLGACAIRGLGDESEM 314
>ref|XP_013589729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X2 [Brassica oleracea var.
oleracea]
Length = 910
Score = 60.8 bits (146), Expect(3) = 7e-12
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = -1
Query: 200 LTLKVSIRFHLISRSILTYDSIIHVCVRGGLDWEALLGLFSQTRHDGIE 54
L L ++ IS SILTY+++I+ C RGGLDWE LLGLF++ RH+GI+
Sbjct: 242 LELLERMKSEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 290
Score = 29.6 bits (65), Expect(3) = 7e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 262 EVFDEMPSHGVSRSGF 215
EVFDEMPS GV+RS F
Sbjct: 208 EVFDEMPSQGVARSVF 223
Score = 25.8 bits (55), Expect(3) = 7e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -3
Query: 54 TLLGAFSSRELGDEAEM 4
TLLGA + R LGDE+EM
Sbjct: 298 TLLGACAIRGLGDESEM 314