BLASTX nr result

ID: Papaver31_contig00046841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00046841
         (416 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009769313.1| PREDICTED: transcription initiation factor I...   110   4e-22
ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp...   100   6e-19
ref|XP_011095967.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    98   3e-18
ref|XP_010057855.1| PREDICTED: transcription initiation factor I...    98   3e-18
ref|XP_010057857.1| PREDICTED: transcription initiation factor I...    96   1e-17
ref|XP_012848869.1| PREDICTED: transcription initiation factor I...    96   1e-17
gb|EYU27711.1| hypothetical protein MIMGU_mgv1a004300mg [Erythra...    96   1e-17
ref|XP_010090967.1| Transcription initiation factor IIF subunit ...    96   1e-17
ref|NP_001154225.2| transcription initiation factor IIF subunit ...    96   1e-17
gb|AAR28013.1| mutant TFIIF-alpha [Arabidopsis thaliana]               96   1e-17
sp|Q9SU25.1|T2FA_ARATH RecName: Full=Transcription initiation fa...    96   1e-17
ref|XP_010270094.1| PREDICTED: transcription initiation factor I...    94   5e-17
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]    93   9e-17
emb|CDP04476.1| unnamed protein product [Coffea canephora]             92   2e-16
ref|XP_002262798.3| PREDICTED: transcription initiation factor I...    92   2e-16
ref|XP_002322538.2| transcription initiation factor IIF alpha su...    91   4e-16
ref|XP_011001011.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    90   8e-16
ref|XP_010252616.1| PREDICTED: transcription initiation factor I...    90   8e-16
ref|XP_009383582.1| PREDICTED: transcription initiation factor I...    87   4e-15
ref|XP_007026250.1| Transcription activators,DNA binding,RNA pol...    87   5e-15

>ref|XP_009769313.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Nicotiana sylvestris]
          Length = 225

 Score =  110 bits (275), Expect = 4e-22
 Identities = 67/149 (44%), Positives = 91/149 (61%), Gaps = 11/149 (7%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRDNNAI 237
           IRA L+Q   +T   L ++F  RL   ED+ AFA +LRRISKIQK   A YVVL+D   +
Sbjct: 52  IRAFLMQRKQVTKLSLVSKFKSRLKCREDKIAFANVLRRISKIQKTGTASYVVLQDAIPV 111

Query: 236 TSRGSTLSS-----------AKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRL 90
               S+ ++            K +   +TG VTE+EIRAFL+Q   +TT  LV+KFK RL
Sbjct: 112 EDESSSTANHSFLIKRASPFPKTAQSLATGPVTEDEIRAFLLQRKSVTTLHLVSKFKSRL 171

Query: 89  SLKEEKNAFAAILRRISKIRKFDGANYVV 3
             +E+K AFA +L+RI+KI+K    +YVV
Sbjct: 172 QRREDKAAFADVLKRITKIQKTGTTSYVV 200



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
 Frame = -1

Query: 263 VVLRDNNAITSRGSTLSSA-----KASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFK 99
           + ++D  + T+  S L        K +  P+TG VTE+EIRAFL+Q   +T   LV+KFK
Sbjct: 13  IPVKDEYSSTANNSVLIKCASPFPKTTQSPATGPVTEDEIRAFLMQRKQVTKLSLVSKFK 72

Query: 98  RRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
            RL  +E+K AFA +LRRISKI+K   A+YVV
Sbjct: 73  SRLKCREDKIAFANVLRRISKIQKTGTASYVV 104


>ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyrata]
           gi|297318500|gb|EFH48922.1| mutant TFIIF-alpha
           [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  100 bits (248), Expect = 6e-19
 Identities = 60/135 (44%), Positives = 86/135 (63%), Gaps = 1/135 (0%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQK-VDEAKYVVLRDNNA 240
           IRAVL++   +TTQ L + F  RL ++ED+NAFA ILR+ISKIQK      +VVLR+N  
Sbjct: 485 IRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREN-- 542

Query: 239 ITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFA 60
                    S           VTE+E+R+ L+++  LTT ELV +FK RL+ +EEK+ FA
Sbjct: 543 -------CESCSNRQPRKMEHVTEDELRSVLMETKQLTTLELVMRFKERLTTREEKDTFA 595

Query: 59  AILRRISKIRKFDGA 15
            IL++I+K++K  G+
Sbjct: 596 HILKKIAKLQKNAGS 610



 Score = 76.3 bits (186), Expect = 9e-12
 Identities = 41/72 (56%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 SSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISK 36
           S+  AS+  +TG VTE+EIRA L++   +TTQ+LV++FK RL  KE+KNAFA ILR+ISK
Sbjct: 467 SAPAASSSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISK 526

Query: 35  IRKFDGA-NYVV 3
           I+K  G+ N+VV
Sbjct: 527 IQKNAGSQNFVV 538


>ref|XP_011095967.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF
           subunit alpha [Sesamum indicum]
          Length = 544

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 56/106 (52%), Positives = 73/106 (68%), Gaps = 7/106 (6%)
 Frame = -1

Query: 299 ISKIQKVDEAKYVVLRDNNAITSRGSTLSSAKASADPS-------TGRVTEEEIRAFLVQ 141
           + K++  +E K V  +D N  +++ ST +       PS       TG VTE+EIRA L+Q
Sbjct: 437 LKKVKTENEVKPV--KDENVSSTKSSTPAKGATPPAPSKSGSAAPTGPVTEDEIRAVLLQ 494

Query: 140 SAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
             P+TTQ+LVAKFK RL LKE+K+AFAAILRRISKI+K +GANYVV
Sbjct: 495 KTPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVV 540



 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 37/56 (66%), Positives = 45/56 (80%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+Q  P+TTQ L A+F  RL  +ED++AFAAILRRISKIQK + A YVVLR+
Sbjct: 488 IRAVLLQKTPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRE 543


>ref|XP_010057855.1| PREDICTED: transcription initiation factor IIF subunit alpha
           isoform X1 [Eucalyptus grandis]
           gi|629110049|gb|KCW75195.1| hypothetical protein
           EUGRSUZ_E03951 [Eucalyptus grandis]
          Length = 543

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 56/102 (54%), Positives = 74/102 (72%), Gaps = 5/102 (4%)
 Frame = -1

Query: 293 KIQKVDEAKYVVLRDNNAITSRGS-----TLSSAKASADPSTGRVTEEEIRAFLVQSAPL 129
           K++   EAK  V +D +  TS+ S     T S +K+++ P TG V EEEIRAF++Q AP+
Sbjct: 439 KVKTETEAKSSV-KDESMPTSKSSVASKATQSDSKSASTPPTGPVAEEEIRAFILQKAPV 497

Query: 128 TTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
           TTQ+LVAKFK RL   E+KNAFA ILRRISKI+K +G++YVV
Sbjct: 498 TTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVV 539



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/56 (64%), Positives = 44/56 (78%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRA ++Q AP+TTQ L A+F  RL S ED+NAFA ILRRISKIQK + + YVVLR+
Sbjct: 487 IRAFILQKAPVTTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVVLRE 542


>ref|XP_010057857.1| PREDICTED: transcription initiation factor IIF subunit alpha
           isoform X2 [Eucalyptus grandis]
           gi|629110050|gb|KCW75196.1| hypothetical protein
           EUGRSUZ_E03951 [Eucalyptus grandis]
          Length = 538

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 55/96 (57%), Positives = 71/96 (73%), Gaps = 5/96 (5%)
 Frame = -1

Query: 275 EAKYVVLRDNNAITSRGS-----TLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELV 111
           EAK  V +D +  TS+ S     T S +K+++ P TG V EEEIRAF++Q AP+TTQ+LV
Sbjct: 440 EAKSSV-KDESMPTSKSSVASKATQSDSKSASTPPTGPVAEEEIRAFILQKAPVTTQDLV 498

Query: 110 AKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
           AKFK RL   E+KNAFA ILRRISKI+K +G++YVV
Sbjct: 499 AKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVV 534



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/56 (64%), Positives = 44/56 (78%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRA ++Q AP+TTQ L A+F  RL S ED+NAFA ILRRISKIQK + + YVVLR+
Sbjct: 482 IRAFILQKAPVTTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVVLRE 537


>ref|XP_012848869.1| PREDICTED: transcription initiation factor IIF subunit alpha
           [Erythranthe guttatus] gi|848897565|ref|XP_012848870.1|
           PREDICTED: transcription initiation factor IIF subunit
           alpha [Erythranthe guttatus] gi|604315006|gb|EYU27712.1|
           hypothetical protein MIMGU_mgv1a004300mg [Erythranthe
           guttata]
          Length = 534

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
 Frame = -1

Query: 338 EEDRNAFAAILRRISKIQKVDEAKYVV-LRDNNAITSRGSTLSSAKASAD-PSTGRVTEE 165
           EE +    A L++     +V   K  +     ++  ++G+T  +   SA  P TG VTEE
Sbjct: 416 EESKTTNGAPLKKAKTENEVKSVKDEIGSSSKSSAPTKGATPPAPSVSASAPPTGPVTEE 475

Query: 164 EIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
           EIRA L+Q  P+TTQ+LVAKFK RL LKE+K+AFAAILRRIS+I+K +GAN+VV
Sbjct: 476 EIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVV 529



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+Q  P+TTQ L A+F  RL  +ED++AFAAILRRIS+IQK + A +VVLR+
Sbjct: 477 IRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVVLRE 532


>gb|EYU27711.1| hypothetical protein MIMGU_mgv1a004300mg [Erythranthe guttata]
          Length = 392

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
 Frame = -1

Query: 338 EEDRNAFAAILRRISKIQKVDEAKYVV-LRDNNAITSRGSTLSSAKASAD-PSTGRVTEE 165
           EE +    A L++     +V   K  +     ++  ++G+T  +   SA  P TG VTEE
Sbjct: 274 EESKTTNGAPLKKAKTENEVKSVKDEIGSSSKSSAPTKGATPPAPSVSASAPPTGPVTEE 333

Query: 164 EIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
           EIRA L+Q  P+TTQ+LVAKFK RL LKE+K+AFAAILRRIS+I+K +GAN+VV
Sbjct: 334 EIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVV 387



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+Q  P+TTQ L A+F  RL  +ED++AFAAILRRIS+IQK + A +VVLR+
Sbjct: 335 IRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVVLRE 390


>ref|XP_010090967.1| Transcription initiation factor IIF subunit alpha [Morus notabilis]
           gi|587851403|gb|EXB41552.1| Transcription initiation
           factor IIF subunit alpha [Morus notabilis]
          Length = 483

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 49/81 (60%), Positives = 61/81 (75%)
 Frame = -1

Query: 245 NAITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNA 66
           N + S+G+  SS KA+   S G VTEEEIRA L+Q  P+TTQ+LVAKF+ RL    +KNA
Sbjct: 399 NNVPSKGTPSSSTKAAVTSSAGPVTEEEIRAVLIQKTPVTTQDLVAKFRARLRTPADKNA 458

Query: 65  FAAILRRISKIRKFDGANYVV 3
           FA ILRRISKI+K +G+NYVV
Sbjct: 459 FAEILRRISKIQKTNGSNYVV 479



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 35/56 (62%), Positives = 43/56 (76%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+Q  P+TTQ L A+F  RL +  D+NAFA ILRRISKIQK + + YVVLR+
Sbjct: 427 IRAVLIQKTPVTTQDLVAKFRARLRTPADKNAFAEILRRISKIQKTNGSNYVVLRE 482


>ref|NP_001154225.2| transcription initiation factor IIF subunit alpha [Arabidopsis
           thaliana] gi|332657756|gb|AEE83156.1| transcription
           initiation factor IIF subunit alpha [Arabidopsis
           thaliana]
          Length = 506

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQK-VDEAKYVVLRDN-- 246
           IRAVL++   +TTQ L + F  RL ++ED+NAFA ILR+ISKIQK      +VVLR+   
Sbjct: 343 IRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREKCQ 402

Query: 245 ---NAITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEE 75
                  SR + L+            VTE+EIR  L++   LTT ELV +FK RL+  E+
Sbjct: 403 PKPGKRESRVNKLNIRSNLQPRKMELVTEDEIRKVLMEKKQLTTLELVMRFKERLTTTED 462

Query: 74  KNAFAAILRRISKIRKFDGANYVV 3
           K++F+ IL++I+K++K  G+   V
Sbjct: 463 KDSFSHILKKIAKLQKNPGSEKFV 486



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 40/72 (55%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 SSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISK 36
           S+  +S+  +TG VTE+EIRA L++   +TTQ+LV++FK RL  KE+KNAFA ILR+ISK
Sbjct: 325 SAPASSSSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISK 384

Query: 35  IRKFDGA-NYVV 3
           I+K  G+ N+VV
Sbjct: 385 IQKNAGSQNFVV 396


>gb|AAR28013.1| mutant TFIIF-alpha [Arabidopsis thaliana]
          Length = 640

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQK-VDEAKYVVLRDN-- 246
           IRAVL++   +TTQ L + F  RL ++ED+NAFA ILR+ISKIQK      +VVLR+   
Sbjct: 486 IRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREKCQ 545

Query: 245 ---NAITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEE 75
                  SR + L+            VTE+EIR  L++   LTT ELV +FK RL+  E+
Sbjct: 546 PKPGKRESRVNKLNIRSNLQPRKMELVTEDEIRKVLMEKKQLTTLELVMRFKERLTTTED 605

Query: 74  KNAFAAILRRISKIRKFDGANYVV 3
           K++F+ IL++I+K++K  G+   V
Sbjct: 606 KDSFSHILKKITKLQKNPGSEKFV 629



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 40/72 (55%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 SSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISK 36
           S+  +S+  +TG VTE+EIRA L++   +TTQ+LV++FK RL  KE+KNAFA ILR+ISK
Sbjct: 468 SAPASSSSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISK 527

Query: 35  IRKFDGA-NYVV 3
           I+K  G+ N+VV
Sbjct: 528 IQKNAGSQNFVV 539


>sp|Q9SU25.1|T2FA_ARATH RecName: Full=Transcription initiation factor IIF subunit alpha;
           Short=TFIIF-alpha; AltName: Full=General transcription
           factor IIF subunit 1; AltName: Full=Transcription
           initiation factor RAP74 homolog; Short=AtRAP74
           gi|5823572|emb|CAB53754.1| putative protein [Arabidopsis
           thaliana] gi|7267963|emb|CAB78304.1| putative protein
           [Arabidopsis thaliana]
          Length = 649

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQK-VDEAKYVVLRDN-- 246
           IRAVL++   +TTQ L + F  RL ++ED+NAFA ILR+ISKIQK      +VVLR+   
Sbjct: 486 IRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREKCQ 545

Query: 245 ---NAITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEE 75
                  SR + L+            VTE+EIR  L++   LTT ELV +FK RL+  E+
Sbjct: 546 PKPGKRESRVNKLNIRSNLQPRKMELVTEDEIRKVLMEKKQLTTLELVMRFKERLTTTED 605

Query: 74  KNAFAAILRRISKIRKFDGANYVV 3
           K++F+ IL++I+K++K  G+   V
Sbjct: 606 KDSFSHILKKIAKLQKNPGSEKFV 629



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 40/72 (55%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 SSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISK 36
           S+  +S+  +TG VTE+EIRA L++   +TTQ+LV++FK RL  KE+KNAFA ILR+ISK
Sbjct: 468 SAPASSSSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISK 527

Query: 35  IRKFDGA-NYVV 3
           I+K  G+ N+VV
Sbjct: 528 IQKNAGSQNFVV 539


>ref|XP_010270094.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Nelumbo nucifera] gi|720045081|ref|XP_010270096.1|
           PREDICTED: transcription initiation factor IIF subunit
           alpha-like [Nelumbo nucifera]
          Length = 540

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
 Frame = -1

Query: 257 LRDNNAITSRGSTLSSAKAS----ADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRL 90
           ++D    TSRG+      AS    + P TG VTE+EIRA L+Q AP+TTQ+LVAKFK RL
Sbjct: 448 VKDEPTSTSRGNVPPKGSASLTTGSTPPTGPVTEDEIRAVLLQMAPVTTQDLVAKFKARL 507

Query: 89  SLKEEKNAFAAILRRISKIRKFDGANYVV 3
             KE+K AFA ILRRISKI+K +G+NYVV
Sbjct: 508 KSKEDKAAFAEILRRISKIQKTNGSNYVV 536



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+Q AP+TTQ L A+F  RL S+ED+ AFA ILRRISKIQK + + YVVLRD
Sbjct: 484 IRAVLLQMAPVTTQDLVAKFKARLKSKEDKAAFAEILRRISKIQKTNGSNYVVLRD 539


>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
          Length = 435

 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 48/78 (61%), Positives = 60/78 (76%)
 Frame = -1

Query: 236 TSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAA 57
           T++G+  SS K  +  S G VTE+EIRA L+Q AP+TTQ+LVAKFK RL  +E+K AFA 
Sbjct: 354 TAKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFAD 413

Query: 56  ILRRISKIRKFDGANYVV 3
           ILRRISKI+K +G NYVV
Sbjct: 414 ILRRISKIQKTNGPNYVV 431



 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+Q AP+TTQ L A+F  RL S+ED+ AFA ILRRISKIQK +   YVVLRD
Sbjct: 379 IRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRD 434


>emb|CDP04476.1| unnamed protein product [Coffea canephora]
          Length = 535

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 57/114 (50%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
 Frame = -1

Query: 338 EEDRNAFAAILRRISKIQKVDEAKYV-VLRDNNAITSRG-STLSSAKASADPSTGRVTEE 165
           EE + A A  L+++    +V   K        N +T +  S   S+K  + PS G VTE+
Sbjct: 419 EEVKAANATPLKKVKSENEVKPVKSENTSGSKNTVTPKAVSQQPSSKTGSTPS-GPVTED 477

Query: 164 EIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
           EIRA L+Q  P+TTQ+LVAKFK RL  KE+K+AFAAILRRISKI+K  G+NYVV
Sbjct: 478 EIRAVLLQKGPVTTQDLVAKFKSRLKTKEDKDAFAAILRRISKIQKTSGSNYVV 531



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 37/56 (66%), Positives = 45/56 (80%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+Q  P+TTQ L A+F  RL ++ED++AFAAILRRISKIQK   + YVVLRD
Sbjct: 479 IRAVLLQKGPVTTQDLVAKFKSRLKTKEDKDAFAAILRRISKIQKTSGSNYVVLRD 534


>ref|XP_002262798.3| PREDICTED: transcription initiation factor IIF subunit alpha [Vitis
           vinifera] gi|297741818|emb|CBI33123.3| unnamed protein
           product [Vitis vinifera]
          Length = 539

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 48/78 (61%), Positives = 59/78 (75%)
 Frame = -1

Query: 236 TSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAA 57
           T +G+  SS K  +  S G VTE+EIRA L+Q AP+TTQ+LVAKFK RL  +E+K AFA 
Sbjct: 458 TPKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFAD 517

Query: 56  ILRRISKIRKFDGANYVV 3
           ILRRISKI+K +G NYVV
Sbjct: 518 ILRRISKIQKTNGPNYVV 535



 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+Q AP+TTQ L A+F  RL S+ED+ AFA ILRRISKIQK +   YVVLRD
Sbjct: 483 IRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRD 538


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
           [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
           transcription initiation factor IIF alpha subunit family
           protein [Populus trichocarpa]
          Length = 540

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 52/104 (50%), Positives = 68/104 (65%), Gaps = 5/104 (4%)
 Frame = -1

Query: 299 ISKIQKVDEAKYVVLRDNNAITSRGSTL-----SSAKASADPSTGRVTEEEIRAFLVQSA 135
           + K++  +E K  V  +++  T   +T      SS   S   STG VTEEEIRA L+Q+ 
Sbjct: 433 VKKVKTENEVKPAVKEESSPATKGTATPKVTPPSSKTGSTSGSTGPVTEEEIRAVLLQNG 492

Query: 134 PLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
           P+TTQ+LVA+FK RL   E+K AFA ILRRISKI+K  G+NYVV
Sbjct: 493 PVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVV 536



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 36/56 (64%), Positives = 42/56 (75%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+Q+ P+TTQ L A F  RL + ED+ AFA ILRRISKIQK   + YVVLRD
Sbjct: 484 IRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVVLRD 539


>ref|XP_011001011.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF
           subunit alpha-like [Populus euphratica]
          Length = 527

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 51/104 (49%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
 Frame = -1

Query: 299 ISKIQKVDEAKYVVLRDNNAITSRGSTL-----SSAKASADPSTGRVTEEEIRAFLVQSA 135
           + K++  +E K  +  +++  T   +T      SS   S+  STG VTEEEIRA L+Q+ 
Sbjct: 420 VKKVKTENEVKPAMKEESSPATKGTATPKVTPPSSKTGSSSGSTGPVTEEEIRAVLLQNG 479

Query: 134 PLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
           P+TTQ+LVA+FK RL   E+K AFA ILRRISKI+K  G+NYVV
Sbjct: 480 PVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVV 523



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 36/56 (64%), Positives = 42/56 (75%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+Q+ P+TTQ L A F  RL + ED+ AFA ILRRISKIQK   + YVVLRD
Sbjct: 471 IRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVVLRD 526


>ref|XP_010252616.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Nelumbo nucifera] gi|719989360|ref|XP_010252617.1|
           PREDICTED: transcription initiation factor IIF subunit
           alpha-like [Nelumbo nucifera]
          Length = 533

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
 Frame = -1

Query: 296 SKIQKVDEAKYVVLRDNNAITSRGSTLSSAKASADPS--TGRVTEEEIRAFLVQSAPLTT 123
           SK  K +      L+D    TSR S    A AS+  +  TG VTE+EIRA L+ ++ LTT
Sbjct: 430 SKKGKFENESKSSLKDEPMSTSRCSAPQKALASSGSTAPTGPVTEDEIRAVLLATSHLTT 489

Query: 122 QELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
           Q+LVAKFK RL LKE+K+AFAAI+RRISKI+K +G+N++V
Sbjct: 490 QDLVAKFKARLKLKEDKSAFAAIVRRISKIQKSNGSNWIV 529



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 33/56 (58%), Positives = 45/56 (80%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IRAVL+ ++ LTTQ L A+F  RL  +ED++AFAAI+RRISKIQK + + ++VLRD
Sbjct: 477 IRAVLLATSHLTTQDLVAKFKARLKLKEDKSAFAAIVRRISKIQKSNGSNWIVLRD 532


>ref|XP_009383582.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Musa acuminata subsp. malaccensis]
          Length = 533

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 43/79 (54%), Positives = 59/79 (74%)
 Frame = -1

Query: 239 ITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFA 60
           +  + S  ++++  + PST  VTE+EIR  L+ + PLTTQ+LVAKFK RL  +E+KNAFA
Sbjct: 451 VPPKSSPATTSRPGSTPSTAPVTEDEIRTVLLSATPLTTQDLVAKFKARLKSQEDKNAFA 510

Query: 59  AILRRISKIRKFDGANYVV 3
            ILRRISKI+K +G NY+V
Sbjct: 511 DILRRISKIQKANGHNYIV 529



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 36/56 (64%), Positives = 43/56 (76%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
           IR VL+ + PLTTQ L A+F  RL S+ED+NAFA ILRRISKIQK +   Y+VLRD
Sbjct: 477 IRTVLLSATPLTTQDLVAKFKARLKSQEDKNAFADILRRISKIQKANGHNYIVLRD 532


>ref|XP_007026250.1| Transcription activators,DNA binding,RNA polymerase II
           transcription factors,catalytics,transcription
           initiation factors isoform 4 [Theobroma cacao]
           gi|508781616|gb|EOY28872.1| Transcription activators,DNA
           binding,RNA polymerase II transcription
           factors,catalytics,transcription initiation factors
           isoform 4 [Theobroma cacao]
          Length = 480

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 50/79 (63%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = -1

Query: 236 TSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAA 57
           TS   T SSAKA +  + G VTEEEIRA L+Q AP+TT +LVAKFK RL   E+K AFA 
Sbjct: 398 TSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFAD 457

Query: 56  ILRRISKIRKFDGA-NYVV 3
           ILRRISKI+K +G  NYVV
Sbjct: 458 ILRRISKIQKTNGPNNYVV 476



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = -1

Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVD-EAKYVVLRD 249
           IRAVL+Q AP+TT  L A+F  RL S ED+ AFA ILRRISKIQK +    YVVLRD
Sbjct: 423 IRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTNGPNNYVVLRD 479


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