BLASTX nr result
ID: Papaver31_contig00046841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00046841
(416 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009769313.1| PREDICTED: transcription initiation factor I... 110 4e-22
ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp... 100 6e-19
ref|XP_011095967.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 98 3e-18
ref|XP_010057855.1| PREDICTED: transcription initiation factor I... 98 3e-18
ref|XP_010057857.1| PREDICTED: transcription initiation factor I... 96 1e-17
ref|XP_012848869.1| PREDICTED: transcription initiation factor I... 96 1e-17
gb|EYU27711.1| hypothetical protein MIMGU_mgv1a004300mg [Erythra... 96 1e-17
ref|XP_010090967.1| Transcription initiation factor IIF subunit ... 96 1e-17
ref|NP_001154225.2| transcription initiation factor IIF subunit ... 96 1e-17
gb|AAR28013.1| mutant TFIIF-alpha [Arabidopsis thaliana] 96 1e-17
sp|Q9SU25.1|T2FA_ARATH RecName: Full=Transcription initiation fa... 96 1e-17
ref|XP_010270094.1| PREDICTED: transcription initiation factor I... 94 5e-17
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera] 93 9e-17
emb|CDP04476.1| unnamed protein product [Coffea canephora] 92 2e-16
ref|XP_002262798.3| PREDICTED: transcription initiation factor I... 92 2e-16
ref|XP_002322538.2| transcription initiation factor IIF alpha su... 91 4e-16
ref|XP_011001011.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 90 8e-16
ref|XP_010252616.1| PREDICTED: transcription initiation factor I... 90 8e-16
ref|XP_009383582.1| PREDICTED: transcription initiation factor I... 87 4e-15
ref|XP_007026250.1| Transcription activators,DNA binding,RNA pol... 87 5e-15
>ref|XP_009769313.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Nicotiana sylvestris]
Length = 225
Score = 110 bits (275), Expect = 4e-22
Identities = 67/149 (44%), Positives = 91/149 (61%), Gaps = 11/149 (7%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRDNNAI 237
IRA L+Q +T L ++F RL ED+ AFA +LRRISKIQK A YVVL+D +
Sbjct: 52 IRAFLMQRKQVTKLSLVSKFKSRLKCREDKIAFANVLRRISKIQKTGTASYVVLQDAIPV 111
Query: 236 TSRGSTLSS-----------AKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRL 90
S+ ++ K + +TG VTE+EIRAFL+Q +TT LV+KFK RL
Sbjct: 112 EDESSSTANHSFLIKRASPFPKTAQSLATGPVTEDEIRAFLLQRKSVTTLHLVSKFKSRL 171
Query: 89 SLKEEKNAFAAILRRISKIRKFDGANYVV 3
+E+K AFA +L+RI+KI+K +YVV
Sbjct: 172 QRREDKAAFADVLKRITKIQKTGTTSYVV 200
Score = 75.9 bits (185), Expect = 1e-11
Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Frame = -1
Query: 263 VVLRDNNAITSRGSTLSSA-----KASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFK 99
+ ++D + T+ S L K + P+TG VTE+EIRAFL+Q +T LV+KFK
Sbjct: 13 IPVKDEYSSTANNSVLIKCASPFPKTTQSPATGPVTEDEIRAFLMQRKQVTKLSLVSKFK 72
Query: 98 RRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
RL +E+K AFA +LRRISKI+K A+YVV
Sbjct: 73 SRLKCREDKIAFANVLRRISKIQKTGTASYVV 104
>ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyrata]
gi|297318500|gb|EFH48922.1| mutant TFIIF-alpha
[Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 100 bits (248), Expect = 6e-19
Identities = 60/135 (44%), Positives = 86/135 (63%), Gaps = 1/135 (0%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQK-VDEAKYVVLRDNNA 240
IRAVL++ +TTQ L + F RL ++ED+NAFA ILR+ISKIQK +VVLR+N
Sbjct: 485 IRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREN-- 542
Query: 239 ITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFA 60
S VTE+E+R+ L+++ LTT ELV +FK RL+ +EEK+ FA
Sbjct: 543 -------CESCSNRQPRKMEHVTEDELRSVLMETKQLTTLELVMRFKERLTTREEKDTFA 595
Query: 59 AILRRISKIRKFDGA 15
IL++I+K++K G+
Sbjct: 596 HILKKIAKLQKNAGS 610
Score = 76.3 bits (186), Expect = 9e-12
Identities = 41/72 (56%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = -1
Query: 215 SSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISK 36
S+ AS+ +TG VTE+EIRA L++ +TTQ+LV++FK RL KE+KNAFA ILR+ISK
Sbjct: 467 SAPAASSSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISK 526
Query: 35 IRKFDGA-NYVV 3
I+K G+ N+VV
Sbjct: 527 IQKNAGSQNFVV 538
>ref|XP_011095967.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF
subunit alpha [Sesamum indicum]
Length = 544
Score = 97.8 bits (242), Expect = 3e-18
Identities = 56/106 (52%), Positives = 73/106 (68%), Gaps = 7/106 (6%)
Frame = -1
Query: 299 ISKIQKVDEAKYVVLRDNNAITSRGSTLSSAKASADPS-------TGRVTEEEIRAFLVQ 141
+ K++ +E K V +D N +++ ST + PS TG VTE+EIRA L+Q
Sbjct: 437 LKKVKTENEVKPV--KDENVSSTKSSTPAKGATPPAPSKSGSAAPTGPVTEDEIRAVLLQ 494
Query: 140 SAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
P+TTQ+LVAKFK RL LKE+K+AFAAILRRISKI+K +GANYVV
Sbjct: 495 KTPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVV 540
Score = 70.1 bits (170), Expect = 6e-10
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+Q P+TTQ L A+F RL +ED++AFAAILRRISKIQK + A YVVLR+
Sbjct: 488 IRAVLLQKTPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRE 543
>ref|XP_010057855.1| PREDICTED: transcription initiation factor IIF subunit alpha
isoform X1 [Eucalyptus grandis]
gi|629110049|gb|KCW75195.1| hypothetical protein
EUGRSUZ_E03951 [Eucalyptus grandis]
Length = 543
Score = 97.8 bits (242), Expect = 3e-18
Identities = 56/102 (54%), Positives = 74/102 (72%), Gaps = 5/102 (4%)
Frame = -1
Query: 293 KIQKVDEAKYVVLRDNNAITSRGS-----TLSSAKASADPSTGRVTEEEIRAFLVQSAPL 129
K++ EAK V +D + TS+ S T S +K+++ P TG V EEEIRAF++Q AP+
Sbjct: 439 KVKTETEAKSSV-KDESMPTSKSSVASKATQSDSKSASTPPTGPVAEEEIRAFILQKAPV 497
Query: 128 TTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
TTQ+LVAKFK RL E+KNAFA ILRRISKI+K +G++YVV
Sbjct: 498 TTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVV 539
Score = 68.6 bits (166), Expect = 2e-09
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRA ++Q AP+TTQ L A+F RL S ED+NAFA ILRRISKIQK + + YVVLR+
Sbjct: 487 IRAFILQKAPVTTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVVLRE 542
>ref|XP_010057857.1| PREDICTED: transcription initiation factor IIF subunit alpha
isoform X2 [Eucalyptus grandis]
gi|629110050|gb|KCW75196.1| hypothetical protein
EUGRSUZ_E03951 [Eucalyptus grandis]
Length = 538
Score = 95.9 bits (237), Expect = 1e-17
Identities = 55/96 (57%), Positives = 71/96 (73%), Gaps = 5/96 (5%)
Frame = -1
Query: 275 EAKYVVLRDNNAITSRGS-----TLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELV 111
EAK V +D + TS+ S T S +K+++ P TG V EEEIRAF++Q AP+TTQ+LV
Sbjct: 440 EAKSSV-KDESMPTSKSSVASKATQSDSKSASTPPTGPVAEEEIRAFILQKAPVTTQDLV 498
Query: 110 AKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
AKFK RL E+KNAFA ILRRISKI+K +G++YVV
Sbjct: 499 AKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVV 534
Score = 68.6 bits (166), Expect = 2e-09
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRA ++Q AP+TTQ L A+F RL S ED+NAFA ILRRISKIQK + + YVVLR+
Sbjct: 482 IRAFILQKAPVTTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVVLRE 537
>ref|XP_012848869.1| PREDICTED: transcription initiation factor IIF subunit alpha
[Erythranthe guttatus] gi|848897565|ref|XP_012848870.1|
PREDICTED: transcription initiation factor IIF subunit
alpha [Erythranthe guttatus] gi|604315006|gb|EYU27712.1|
hypothetical protein MIMGU_mgv1a004300mg [Erythranthe
guttata]
Length = 534
Score = 95.9 bits (237), Expect = 1e-17
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Frame = -1
Query: 338 EEDRNAFAAILRRISKIQKVDEAKYVV-LRDNNAITSRGSTLSSAKASAD-PSTGRVTEE 165
EE + A L++ +V K + ++ ++G+T + SA P TG VTEE
Sbjct: 416 EESKTTNGAPLKKAKTENEVKSVKDEIGSSSKSSAPTKGATPPAPSVSASAPPTGPVTEE 475
Query: 164 EIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
EIRA L+Q P+TTQ+LVAKFK RL LKE+K+AFAAILRRIS+I+K +GAN+VV
Sbjct: 476 EIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVV 529
Score = 67.0 bits (162), Expect = 5e-09
Identities = 35/56 (62%), Positives = 45/56 (80%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+Q P+TTQ L A+F RL +ED++AFAAILRRIS+IQK + A +VVLR+
Sbjct: 477 IRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVVLRE 532
>gb|EYU27711.1| hypothetical protein MIMGU_mgv1a004300mg [Erythranthe guttata]
Length = 392
Score = 95.9 bits (237), Expect = 1e-17
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Frame = -1
Query: 338 EEDRNAFAAILRRISKIQKVDEAKYVV-LRDNNAITSRGSTLSSAKASAD-PSTGRVTEE 165
EE + A L++ +V K + ++ ++G+T + SA P TG VTEE
Sbjct: 274 EESKTTNGAPLKKAKTENEVKSVKDEIGSSSKSSAPTKGATPPAPSVSASAPPTGPVTEE 333
Query: 164 EIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
EIRA L+Q P+TTQ+LVAKFK RL LKE+K+AFAAILRRIS+I+K +GAN+VV
Sbjct: 334 EIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVV 387
Score = 67.0 bits (162), Expect = 5e-09
Identities = 35/56 (62%), Positives = 45/56 (80%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+Q P+TTQ L A+F RL +ED++AFAAILRRIS+IQK + A +VVLR+
Sbjct: 335 IRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVVLRE 390
>ref|XP_010090967.1| Transcription initiation factor IIF subunit alpha [Morus notabilis]
gi|587851403|gb|EXB41552.1| Transcription initiation
factor IIF subunit alpha [Morus notabilis]
Length = 483
Score = 95.5 bits (236), Expect = 1e-17
Identities = 49/81 (60%), Positives = 61/81 (75%)
Frame = -1
Query: 245 NAITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNA 66
N + S+G+ SS KA+ S G VTEEEIRA L+Q P+TTQ+LVAKF+ RL +KNA
Sbjct: 399 NNVPSKGTPSSSTKAAVTSSAGPVTEEEIRAVLIQKTPVTTQDLVAKFRARLRTPADKNA 458
Query: 65 FAAILRRISKIRKFDGANYVV 3
FA ILRRISKI+K +G+NYVV
Sbjct: 459 FAEILRRISKIQKTNGSNYVV 479
Score = 67.0 bits (162), Expect = 5e-09
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+Q P+TTQ L A+F RL + D+NAFA ILRRISKIQK + + YVVLR+
Sbjct: 427 IRAVLIQKTPVTTQDLVAKFRARLRTPADKNAFAEILRRISKIQKTNGSNYVVLRE 482
>ref|NP_001154225.2| transcription initiation factor IIF subunit alpha [Arabidopsis
thaliana] gi|332657756|gb|AEE83156.1| transcription
initiation factor IIF subunit alpha [Arabidopsis
thaliana]
Length = 506
Score = 95.5 bits (236), Expect = 1e-17
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQK-VDEAKYVVLRDN-- 246
IRAVL++ +TTQ L + F RL ++ED+NAFA ILR+ISKIQK +VVLR+
Sbjct: 343 IRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREKCQ 402
Query: 245 ---NAITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEE 75
SR + L+ VTE+EIR L++ LTT ELV +FK RL+ E+
Sbjct: 403 PKPGKRESRVNKLNIRSNLQPRKMELVTEDEIRKVLMEKKQLTTLELVMRFKERLTTTED 462
Query: 74 KNAFAAILRRISKIRKFDGANYVV 3
K++F+ IL++I+K++K G+ V
Sbjct: 463 KDSFSHILKKIAKLQKNPGSEKFV 486
Score = 75.1 bits (183), Expect = 2e-11
Identities = 40/72 (55%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = -1
Query: 215 SSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISK 36
S+ +S+ +TG VTE+EIRA L++ +TTQ+LV++FK RL KE+KNAFA ILR+ISK
Sbjct: 325 SAPASSSSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISK 384
Query: 35 IRKFDGA-NYVV 3
I+K G+ N+VV
Sbjct: 385 IQKNAGSQNFVV 396
>gb|AAR28013.1| mutant TFIIF-alpha [Arabidopsis thaliana]
Length = 640
Score = 95.5 bits (236), Expect = 1e-17
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQK-VDEAKYVVLRDN-- 246
IRAVL++ +TTQ L + F RL ++ED+NAFA ILR+ISKIQK +VVLR+
Sbjct: 486 IRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREKCQ 545
Query: 245 ---NAITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEE 75
SR + L+ VTE+EIR L++ LTT ELV +FK RL+ E+
Sbjct: 546 PKPGKRESRVNKLNIRSNLQPRKMELVTEDEIRKVLMEKKQLTTLELVMRFKERLTTTED 605
Query: 74 KNAFAAILRRISKIRKFDGANYVV 3
K++F+ IL++I+K++K G+ V
Sbjct: 606 KDSFSHILKKITKLQKNPGSEKFV 629
Score = 75.1 bits (183), Expect = 2e-11
Identities = 40/72 (55%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = -1
Query: 215 SSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISK 36
S+ +S+ +TG VTE+EIRA L++ +TTQ+LV++FK RL KE+KNAFA ILR+ISK
Sbjct: 468 SAPASSSSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISK 527
Query: 35 IRKFDGA-NYVV 3
I+K G+ N+VV
Sbjct: 528 IQKNAGSQNFVV 539
>sp|Q9SU25.1|T2FA_ARATH RecName: Full=Transcription initiation factor IIF subunit alpha;
Short=TFIIF-alpha; AltName: Full=General transcription
factor IIF subunit 1; AltName: Full=Transcription
initiation factor RAP74 homolog; Short=AtRAP74
gi|5823572|emb|CAB53754.1| putative protein [Arabidopsis
thaliana] gi|7267963|emb|CAB78304.1| putative protein
[Arabidopsis thaliana]
Length = 649
Score = 95.5 bits (236), Expect = 1e-17
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQK-VDEAKYVVLRDN-- 246
IRAVL++ +TTQ L + F RL ++ED+NAFA ILR+ISKIQK +VVLR+
Sbjct: 486 IRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREKCQ 545
Query: 245 ---NAITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEE 75
SR + L+ VTE+EIR L++ LTT ELV +FK RL+ E+
Sbjct: 546 PKPGKRESRVNKLNIRSNLQPRKMELVTEDEIRKVLMEKKQLTTLELVMRFKERLTTTED 605
Query: 74 KNAFAAILRRISKIRKFDGANYVV 3
K++F+ IL++I+K++K G+ V
Sbjct: 606 KDSFSHILKKIAKLQKNPGSEKFV 629
Score = 75.1 bits (183), Expect = 2e-11
Identities = 40/72 (55%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = -1
Query: 215 SSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISK 36
S+ +S+ +TG VTE+EIRA L++ +TTQ+LV++FK RL KE+KNAFA ILR+ISK
Sbjct: 468 SAPASSSSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISK 527
Query: 35 IRKFDGA-NYVV 3
I+K G+ N+VV
Sbjct: 528 IQKNAGSQNFVV 539
>ref|XP_010270094.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Nelumbo nucifera] gi|720045081|ref|XP_010270096.1|
PREDICTED: transcription initiation factor IIF subunit
alpha-like [Nelumbo nucifera]
Length = 540
Score = 93.6 bits (231), Expect = 5e-17
Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
Frame = -1
Query: 257 LRDNNAITSRGSTLSSAKAS----ADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRL 90
++D TSRG+ AS + P TG VTE+EIRA L+Q AP+TTQ+LVAKFK RL
Sbjct: 448 VKDEPTSTSRGNVPPKGSASLTTGSTPPTGPVTEDEIRAVLLQMAPVTTQDLVAKFKARL 507
Query: 89 SLKEEKNAFAAILRRISKIRKFDGANYVV 3
KE+K AFA ILRRISKI+K +G+NYVV
Sbjct: 508 KSKEDKAAFAEILRRISKIQKTNGSNYVV 536
Score = 70.5 bits (171), Expect = 5e-10
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+Q AP+TTQ L A+F RL S+ED+ AFA ILRRISKIQK + + YVVLRD
Sbjct: 484 IRAVLLQMAPVTTQDLVAKFKARLKSKEDKAAFAEILRRISKIQKTNGSNYVVLRD 539
>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
Length = 435
Score = 92.8 bits (229), Expect = 9e-17
Identities = 48/78 (61%), Positives = 60/78 (76%)
Frame = -1
Query: 236 TSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAA 57
T++G+ SS K + S G VTE+EIRA L+Q AP+TTQ+LVAKFK RL +E+K AFA
Sbjct: 354 TAKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFAD 413
Query: 56 ILRRISKIRKFDGANYVV 3
ILRRISKI+K +G NYVV
Sbjct: 414 ILRRISKIQKTNGPNYVV 431
Score = 70.9 bits (172), Expect = 4e-10
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+Q AP+TTQ L A+F RL S+ED+ AFA ILRRISKIQK + YVVLRD
Sbjct: 379 IRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRD 434
>emb|CDP04476.1| unnamed protein product [Coffea canephora]
Length = 535
Score = 92.0 bits (227), Expect = 2e-16
Identities = 57/114 (50%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Frame = -1
Query: 338 EEDRNAFAAILRRISKIQKVDEAKYV-VLRDNNAITSRG-STLSSAKASADPSTGRVTEE 165
EE + A A L+++ +V K N +T + S S+K + PS G VTE+
Sbjct: 419 EEVKAANATPLKKVKSENEVKPVKSENTSGSKNTVTPKAVSQQPSSKTGSTPS-GPVTED 477
Query: 164 EIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
EIRA L+Q P+TTQ+LVAKFK RL KE+K+AFAAILRRISKI+K G+NYVV
Sbjct: 478 EIRAVLLQKGPVTTQDLVAKFKSRLKTKEDKDAFAAILRRISKIQKTSGSNYVV 531
Score = 71.2 bits (173), Expect = 3e-10
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+Q P+TTQ L A+F RL ++ED++AFAAILRRISKIQK + YVVLRD
Sbjct: 479 IRAVLLQKGPVTTQDLVAKFKSRLKTKEDKDAFAAILRRISKIQKTSGSNYVVLRD 534
>ref|XP_002262798.3| PREDICTED: transcription initiation factor IIF subunit alpha [Vitis
vinifera] gi|297741818|emb|CBI33123.3| unnamed protein
product [Vitis vinifera]
Length = 539
Score = 92.0 bits (227), Expect = 2e-16
Identities = 48/78 (61%), Positives = 59/78 (75%)
Frame = -1
Query: 236 TSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAA 57
T +G+ SS K + S G VTE+EIRA L+Q AP+TTQ+LVAKFK RL +E+K AFA
Sbjct: 458 TPKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFAD 517
Query: 56 ILRRISKIRKFDGANYVV 3
ILRRISKI+K +G NYVV
Sbjct: 518 ILRRISKIQKTNGPNYVV 535
Score = 70.9 bits (172), Expect = 4e-10
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+Q AP+TTQ L A+F RL S+ED+ AFA ILRRISKIQK + YVVLRD
Sbjct: 483 IRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRD 538
>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|550320589|gb|EEF04299.2|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 540
Score = 90.5 bits (223), Expect = 4e-16
Identities = 52/104 (50%), Positives = 68/104 (65%), Gaps = 5/104 (4%)
Frame = -1
Query: 299 ISKIQKVDEAKYVVLRDNNAITSRGSTL-----SSAKASADPSTGRVTEEEIRAFLVQSA 135
+ K++ +E K V +++ T +T SS S STG VTEEEIRA L+Q+
Sbjct: 433 VKKVKTENEVKPAVKEESSPATKGTATPKVTPPSSKTGSTSGSTGPVTEEEIRAVLLQNG 492
Query: 134 PLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
P+TTQ+LVA+FK RL E+K AFA ILRRISKI+K G+NYVV
Sbjct: 493 PVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVV 536
Score = 67.4 bits (163), Expect = 4e-09
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+Q+ P+TTQ L A F RL + ED+ AFA ILRRISKIQK + YVVLRD
Sbjct: 484 IRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVVLRD 539
>ref|XP_011001011.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF
subunit alpha-like [Populus euphratica]
Length = 527
Score = 89.7 bits (221), Expect = 8e-16
Identities = 51/104 (49%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
Frame = -1
Query: 299 ISKIQKVDEAKYVVLRDNNAITSRGSTL-----SSAKASADPSTGRVTEEEIRAFLVQSA 135
+ K++ +E K + +++ T +T SS S+ STG VTEEEIRA L+Q+
Sbjct: 420 VKKVKTENEVKPAMKEESSPATKGTATPKVTPPSSKTGSSSGSTGPVTEEEIRAVLLQNG 479
Query: 134 PLTTQELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
P+TTQ+LVA+FK RL E+K AFA ILRRISKI+K G+NYVV
Sbjct: 480 PVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVV 523
Score = 67.4 bits (163), Expect = 4e-09
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+Q+ P+TTQ L A F RL + ED+ AFA ILRRISKIQK + YVVLRD
Sbjct: 471 IRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVVLRD 526
>ref|XP_010252616.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Nelumbo nucifera] gi|719989360|ref|XP_010252617.1|
PREDICTED: transcription initiation factor IIF subunit
alpha-like [Nelumbo nucifera]
Length = 533
Score = 89.7 bits (221), Expect = 8e-16
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = -1
Query: 296 SKIQKVDEAKYVVLRDNNAITSRGSTLSSAKASADPS--TGRVTEEEIRAFLVQSAPLTT 123
SK K + L+D TSR S A AS+ + TG VTE+EIRA L+ ++ LTT
Sbjct: 430 SKKGKFENESKSSLKDEPMSTSRCSAPQKALASSGSTAPTGPVTEDEIRAVLLATSHLTT 489
Query: 122 QELVAKFKRRLSLKEEKNAFAAILRRISKIRKFDGANYVV 3
Q+LVAKFK RL LKE+K+AFAAI+RRISKI+K +G+N++V
Sbjct: 490 QDLVAKFKARLKLKEDKSAFAAIVRRISKIQKSNGSNWIV 529
Score = 62.0 bits (149), Expect = 2e-07
Identities = 33/56 (58%), Positives = 45/56 (80%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IRAVL+ ++ LTTQ L A+F RL +ED++AFAAI+RRISKIQK + + ++VLRD
Sbjct: 477 IRAVLLATSHLTTQDLVAKFKARLKLKEDKSAFAAIVRRISKIQKSNGSNWIVLRD 532
>ref|XP_009383582.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Musa acuminata subsp. malaccensis]
Length = 533
Score = 87.4 bits (215), Expect = 4e-15
Identities = 43/79 (54%), Positives = 59/79 (74%)
Frame = -1
Query: 239 ITSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFA 60
+ + S ++++ + PST VTE+EIR L+ + PLTTQ+LVAKFK RL +E+KNAFA
Sbjct: 451 VPPKSSPATTSRPGSTPSTAPVTEDEIRTVLLSATPLTTQDLVAKFKARLKSQEDKNAFA 510
Query: 59 AILRRISKIRKFDGANYVV 3
ILRRISKI+K +G NY+V
Sbjct: 511 DILRRISKIQKANGHNYIV 529
Score = 68.9 bits (167), Expect = 1e-09
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVDEAKYVVLRD 249
IR VL+ + PLTTQ L A+F RL S+ED+NAFA ILRRISKIQK + Y+VLRD
Sbjct: 477 IRTVLLSATPLTTQDLVAKFKARLKSQEDKNAFADILRRISKIQKANGHNYIVLRD 532
>ref|XP_007026250.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 4 [Theobroma cacao]
gi|508781616|gb|EOY28872.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 4 [Theobroma cacao]
Length = 480
Score = 87.0 bits (214), Expect = 5e-15
Identities = 50/79 (63%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = -1
Query: 236 TSRGSTLSSAKASADPSTGRVTEEEIRAFLVQSAPLTTQELVAKFKRRLSLKEEKNAFAA 57
TS T SSAKA + + G VTEEEIRA L+Q AP+TT +LVAKFK RL E+K AFA
Sbjct: 398 TSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFAD 457
Query: 56 ILRRISKIRKFDGA-NYVV 3
ILRRISKI+K +G NYVV
Sbjct: 458 ILRRISKIQKTNGPNNYVV 476
Score = 63.2 bits (152), Expect = 8e-08
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = -1
Query: 416 IRAVLVQSAPLTTQGLGAEFWERLVSEEDRNAFAAILRRISKIQKVD-EAKYVVLRD 249
IRAVL+Q AP+TT L A+F RL S ED+ AFA ILRRISKIQK + YVVLRD
Sbjct: 423 IRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTNGPNNYVVLRD 479