BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00043898
         (740 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP17738.1| unnamed protein product [Coffea canephora]            187   5e-45
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   183   1e-43
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   181   6e-43
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...   176   2e-41
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   154   8e-35
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905...   145   2e-32
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   145   2e-32
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   142   2e-31
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]   142   2e-31
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   141   4e-31
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]   141   5e-31
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]   140   7e-31
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   139   3e-30
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   137   6e-30
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   137   6e-30
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   137   6e-30
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           137   7e-30
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     137   7e-30
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   137   1e-29
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...   135   2e-29

>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  187 bits (476), Expect = 5e-45
 Identities = 100/247 (40%), Positives = 152/247 (61%), Gaps = 1/247 (0%)
 Frame = -1

Query: 740 EHLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTL 561
           EH+  +N+L+A+L+N D    DE+ AL L++SLP+++E +   L+HGK+ ++   V + L
Sbjct: 147 EHITIFNQLVADLLNLDVNFEDEDLALMLLSSLPDEFEHLETTLLHGKENVSLDAVCSAL 206

Query: 560 RSEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCH 381
            S E RK D++     A ++ L+ARGR                     +R+ KDECA+C 
Sbjct: 207 YSRELRKQDKKKKKVAAADEALVARGRQQS------QSKGRRGWSKSISRVAKDECAFCR 260

Query: 380 DFGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDTG 201
           + GHW KDC K K  ++  +  +VN+A+   ++   SDFSL V  S  T     W+LD+ 
Sbjct: 261 EKGHWKKDCPKLK--KKGKAPQDVNVAECKSDA--ESDFSLAV--SRLTSHPDEWILDST 314

Query: 200 ATYHICPYRDWFSSFEELDGE-VRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAI 24
            TYH+ P R+WF  FEELDG  V MGN++ C+ +GIGS++++ HDG  R LK+VR+VP +
Sbjct: 315 CTYHMTPMREWFFEFEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNL 374

Query: 23  KKNLISL 3
           K++LISL
Sbjct: 375 KRSLISL 381


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  183 bits (464), Expect = 1e-43
 Identities = 97/231 (41%), Positives = 138/231 (59%), Gaps = 1/231 (0%)
 Frame = -1

Query: 692 DEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLRSEEFRKMDREDLASE 513
           D K  DE+ AL L++SLP+++E +   L+HGK+ ++   V + L S E RK D+    S 
Sbjct: 77  DVKFEDEDLALMLLSSLPDEFEHLETTLLHGKENVSLDVVCSALYSHELRKQDKMKTKST 136

Query: 512 ANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCHDFGHWAKDCTKRKARE 333
            + + L+ARGR                       + KDECA+CH+ GHW KDC K + +E
Sbjct: 137 TSEEALVARGRQQSQTKERRGMSKSKGRA-----VAKDECAFCHEKGHWKKDCPKLQKKE 191

Query: 332 RDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDTGATYHICPYRDWFSSFE 153
           +   +  V   K + ES    D SL V+ SA    D  W+LD+G TYH+CP RDWF  F+
Sbjct: 192 KVLQDANVAECKSDVES----DISLIVSLSASLYLD-EWILDSGCTYHMCPIRDWFFEFQ 246

Query: 152 ELDGEV-RMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISL 3
           ELDG V  MGN++ C+ +GIGS++++ HDG  R L++VR+VP +KKNLISL
Sbjct: 247 ELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISL 297


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  181 bits (458), Expect = 6e-43
 Identities = 95/229 (41%), Positives = 137/229 (59%), Gaps = 1/229 (0%)
 Frame = -1

Query: 686 KINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLRSEEFRKMDREDLASEAN 507
           K  DE+ AL L++SLP+++E +   L+HGK+ ++   V + L S E RK D+    S  +
Sbjct: 78  KFEDEDLALMLLSSLPDEFEHLETTLLHGKENVSLDAVCSALYSHELRKQDKMRTKSTTS 137

Query: 506 NDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCHDFGHWAKDCTKRKARERD 327
            + L+ RGR                       + KDECA+CH+ GHW KDC K + +E+ 
Sbjct: 138 EEALVIRGRQQSQTKERRGMSKSKGRV-----VAKDECAFCHEKGHWKKDCPKLQKKEKV 192

Query: 326 NSNTEVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDTGATYHICPYRDWFSSFEEL 147
             +  V   K + ES    D SL V+ SA +  D  W+LD+G TYH+CP RDWF  F+EL
Sbjct: 193 PQDANVAECKSDVES----DISLIVSLSASSYPD-EWILDSGCTYHMCPIRDWFFEFQEL 247

Query: 146 DGEV-RMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISL 3
           DG V  MGN++ C+ +GIGS++++ HDG  R L++VR+VP +KKNLISL
Sbjct: 248 DGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISL 296


>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score =  176 bits (445), Expect = 2e-41
 Identities = 93/234 (39%), Positives = 136/234 (58%), Gaps = 1/234 (0%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+  +N+L+A L+N D K  DE+ AL L++SLP+++E +   L+HGKD ++   V + L 
Sbjct: 101 HITMFNQLVAYLLNLDVKFEDEDLALMLVSSLPDEFEHLETTLLHGKDNVSLDVVCSALY 160

Query: 557 SEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCHD 378
           S E RK D+    S  + + L+ RG                        + KDECA+CH+
Sbjct: 161 SHELRKQDKMKTKSTTSEEALVTRGGQQSQTKERRGMCKSKGRV-----VAKDECAFCHE 215

Query: 377 FGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDTGA 198
            GHW KDC K + +E+   +  V   K + E    SD SL V+ SA +  D  W+LD+G 
Sbjct: 216 KGHWKKDCPKLQKKEKVPQDANVAECKSDVE----SDISLIVSLSASSYPD-EWILDSGC 270

Query: 197 TYHICPYRDWFSSFEELD-GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVR 39
           TYH+CP RDWF  F+ELD G V MGN++ C+  GIGS++++ HDG  R L++VR
Sbjct: 271 TYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTAGIGSIKLRNHDGSTRILRDVR 324


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  154 bits (388), Expect = 8e-35
 Identities = 92/255 (36%), Positives = 129/255 (50%), Gaps = 9/255 (3%)
 Frame = -1

Query: 740 EHLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTL 561
           EHL+  N LL EL N D KI DE+ AL L+ SLP  +E  +++ + GKD ++  EV + L
Sbjct: 117 EHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSAL 176

Query: 560 RSEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQ-------- 405
            S E R                 A G STD                   + +        
Sbjct: 177 HSRELRHK---------------ANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKP 221

Query: 404 KDECAWCHDFGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITD 225
            D C +C + GHW  DC K+K +    S   V+ A   E++    D +L       T   
Sbjct: 222 DDVCNYCKEKGHWKFDCPKKKKQSEKQS---VSAAVAEEDTNSEEDIALVADEH--THHS 276

Query: 224 GTWVLDTGATYHICPYRDWFSSFEELD-GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELK 48
             WVLD+GA+YHICP R+WF+++E++D G + M N+  C+V+G GS++I+ HDG    L 
Sbjct: 277 DVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLN 336

Query: 47  EVRFVPAIKKNLISL 3
           EVR VP + KNLISL
Sbjct: 337 EVRHVPLMTKNLISL 351


>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
           subsp. vulgaris]
          Length = 2676

 Score =  145 bits (367), Expect = 2e-32
 Identities = 86/253 (33%), Positives = 134/253 (52%), Gaps = 8/253 (3%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+D +  ++ +L N D  ++DE+ A+ L+ SLP  Y+   + +++G+D ++  +V   L 
Sbjct: 118 HIDEFYSIVMDLQNIDVILDDEDLAIWLLCSLPHSYKHFRETILYGRDDLSIDDVRDALN 177

Query: 557 SEEFRKMDREDLASEANN-DLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDE----C 393
             E   +D +  +  +N+ D L  RGRS D                 +++         C
Sbjct: 178 QREL--IDNQLTSKSSNSSDGLFVRGRSNDVASTYQGGNGGKNRGRSKSKKPNSNKHKTC 235

Query: 392 AWCHDFGHWAKDCTKRKARERDNSNTEVNIAKGNE--ESVDASDFSLTVTPSACTITDGT 219
            +CH  GH   +C K K ++  +S       KG E   S D S         A  ++   
Sbjct: 236 NYCHLKGHIKSECYKLKNKQSGDSKPR----KGKEPMNSADVSYVDFDSESGALDVSKSE 291

Query: 218 WVLDTGATYHICPYRDWFSSFEELDG-EVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEV 42
           W++D+G ++H+ PY+D F+S+EE +G  V MGNN TC+V+GIGSV I M DG VR L +V
Sbjct: 292 WIMDSGCSFHVTPYKDMFTSYEEFNGGTVTMGNNATCKVVGIGSVDITMFDGTVRTLSKV 351

Query: 41  RFVPAIKKNLISL 3
           R VP +KKNLISL
Sbjct: 352 RHVPEMKKNLISL 364


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  145 bits (367), Expect = 2e-32
 Identities = 83/257 (32%), Positives = 135/257 (52%), Gaps = 11/257 (4%)
 Frame = -1

Query: 740 EHLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTL 561
           +HL ++ +++A+L + + K ++E+  L L+ SLP  Y      +++ +D +T  EV   L
Sbjct: 61  DHLSTFKEIVADLESMEIKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLQEVYDAL 120

Query: 560 RSEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRT--RLQKDECAW 387
            ++E  K       S +  + L+ RGR  +                 R+  R +   C +
Sbjct: 121 HAKEKMKKMVPSEGSNSQPESLVVRGRQQEKNTDNKSRDKSSSGYRGRSKSRGRYKSCKY 180

Query: 386 CHDFGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDAS--------DFSLTVTPSACTI 231
           C   GH   DC K + +E+   N +    KG +E    +        D  L V  + C  
Sbjct: 181 CKRGGHDISDCWKLQNKEKHKGNYK---PKGKQEEQGKAAVATDNKPDAELLVAYAGCVQ 237

Query: 230 TDGTWVLDTGATYHICPYRDWFSSFEELDG-EVRMGNNHTCRVIGIGSVRIKMHDGMVRE 54
           T   W+LDTG TYH+CP RDWF+++E + G  V MG+N  C+V G+G+++IKM DG +R 
Sbjct: 238 TSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRT 297

Query: 53  LKEVRFVPAIKKNLISL 3
           L +VR +P++K+NLISL
Sbjct: 298 LSDVRHIPSLKRNLISL 314


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53370655|gb|AAU89150.1| integrase core domain
           containing protein [Oryza sativa Japonica Group]
           gi|108710286|gb|ABF98081.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1322

 Score =  142 bits (359), Expect = 2e-31
 Identities = 80/247 (32%), Positives = 132/247 (53%), Gaps = 2/247 (0%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+  + +++A+LV+ + + +DE+  L L+ SLP  Y      ++  +D++T AEV   L+
Sbjct: 122 HISVFKEIVADLVSMEVQFDDEDLGLLLLCSLPSSYANFRHTILLSRDELTLAEVYEALQ 181

Query: 557 SEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCHD 378
           + E  K   +  AS +  + L  RGRS                        K  C +C  
Sbjct: 182 NREKMKGMVQSYASSSKGEALQVRGRSEQRTYNDSNDHDKSQSRGRSKSRGKKFCKYCKK 241

Query: 377 FGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDTGA 198
             H+ ++C K + +E+  S+ + ++    E S D+ D    V  +    +   W+LDT  
Sbjct: 242 KNHFIEECWKLQNKEKRKSDGKASVVTSAENS-DSGD--CLVVFAGYVASHDEWILDTAC 298

Query: 197 TYHICPYRDWFSSFEELDGE--VRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAI 24
           ++HIC  RDWFSS++ +  E  VRMG+++   ++GIGSV+IK HDGM R LK+VR +P +
Sbjct: 299 SFHICINRDWFSSYKSVQNEDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGM 358

Query: 23  KKNLISL 3
            +NLISL
Sbjct: 359 ARNLISL 365


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score =  142 bits (358), Expect = 2e-31
 Identities = 83/249 (33%), Positives = 131/249 (52%), Gaps = 3/249 (1%)
 Frame = -1

Query: 740 EHLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTL 561
           +H + +NK + +L N D K+N E+QA+ L+ SLP  YE  +  +M+G+  +   +V   L
Sbjct: 74  DHFNEFNKTIXDLRNIDVKVNYEDQAIFLMCSLPNSYEHFVDIMMYGRGTLFIKDVRVAL 133

Query: 560 RSEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCH 381
            S E +KM  +    ++    L+ARGR+                         ++C  C 
Sbjct: 134 NSRELKKMVFKSRKYDSGEG-LVARGRTRKKNNGRRGRSRSKSRG-------NNKCFKCK 185

Query: 380 DFGHWAKDCTKRKARE--RDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLD 207
             GH+ K+   RK +E  R+ ++ +   AK N  + D       V     T +D  W+LD
Sbjct: 186 KEGHYVKNXPDRKGKENKRNYNSGDATFAKENSNTTD-------VLLVXVTNSDDEWILD 238

Query: 206 TGATYHICPYRDWFSSFEELD-GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVP 30
           +G +YH+ P  DWFS+++ +D G+V MGN   C+V+GI  ++IKMH G++R L  VR VP
Sbjct: 239 SGCSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVVGIHXIQIKMHGGIIRTLTNVRHVP 298

Query: 29  AIKKNLISL 3
            + KNLI L
Sbjct: 299 KLNKNLIFL 307


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  141 bits (356), Expect = 4e-31
 Identities = 79/247 (31%), Positives = 131/247 (53%), Gaps = 2/247 (0%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+  + +++ +LV+ + + +DE+  L L+ SLP  Y      ++  +D++T AEV   L+
Sbjct: 122 HISVFKEIVVDLVSIEVQFDDEDLGLLLLCSLPSSYANFRDTILLSRDELTLAEVYEALQ 181

Query: 557 SEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCHD 378
           + E  K   +  AS +  + L  RGRS                        K  C +C  
Sbjct: 182 NREKMKGMVQSDASSSKGEALQVRGRSEQRTYNDSSDRDKSQSRGRSKSRGKKFCKYCKK 241

Query: 377 FGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDTGA 198
             H+ ++C K + +E+  S+ + ++    E S D+ D    V  + C  +   W+LDT  
Sbjct: 242 KNHFIEECWKLQNKEKRKSDGKASVVTSAENS-DSGD--CLVVFAGCVASHDEWILDTAC 298

Query: 197 TYHICPYRDWFSSFEELDGE--VRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAI 24
           ++HIC  RDWFSS++ +     VRMG+++   ++GIGSV+IK HDGM R LK+VR +P +
Sbjct: 299 SFHICINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGM 358

Query: 23  KKNLISL 3
            +NLISL
Sbjct: 359 ARNLISL 365


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score =  141 bits (355), Expect = 5e-31
 Identities = 76/248 (30%), Positives = 135/248 (54%), Gaps = 2/248 (0%)
 Frame = -1

Query: 740 EHLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTL 561
           EHLD +NK++ +L N D  +++E++A+ L+ SL   Y  + +A+M+G+D +T+ EV + L
Sbjct: 120 EHLDHFNKIILDLKNIDIAVSNEDKAILLLTSLDASYTNMKEAIMYGRDILTFDEVQSIL 179

Query: 560 RSEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCH 381
            + E  K +    + E   + L  RG+S                   +++ +K +C  CH
Sbjct: 180 HARELHKQEE---SKEELGEGLNIRGKS----KKREKKKGNNSKSRSKSKTKKFKCFICH 232

Query: 380 DFGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDG-TWVLDT 204
             GH+ KDC   +       NT        + ++    +      +   +  G  W+LD+
Sbjct: 233 KEGHFKKDCPDMR------QNTXKKTMNEGDATMILDGYDNAGVLNVAEVDSGKEWILDS 286

Query: 203 GATYHICPYRDWFSSFEELD-GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPA 27
           G ++H+CP + WF  F+E + G V +GNN  C+++G G+V+IK +DG+ R L+++R++P 
Sbjct: 287 GCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTGTVKIKHYDGIERVLEDIRYIPE 346

Query: 26  IKKNLISL 3
           +K NLISL
Sbjct: 347 LKMNLISL 354


>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
          Length = 947

 Score =  140 bits (354), Expect = 7e-31
 Identities = 77/248 (31%), Positives = 133/248 (53%), Gaps = 2/248 (0%)
 Frame = -1

Query: 740 EHLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTL 561
           EH D +NK++ +L N D  +++E++A+ L+ SL   Y  + +A+M+G+D MT+ EV + L
Sbjct: 164 EHFDHFNKIILDLENIDITVSNEDKAILLLTSLDASYTNMKEAIMYGRDSMTFDEVQSIL 223

Query: 560 RSEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCH 381
              E +K +    + + + + L  RGR                    ++  +K +C  CH
Sbjct: 224 HPRELQKQEE---SKDESGEGLNIRGR-----YDKREKKCKNLKAKSKSNTKKFKCFICH 275

Query: 380 DFGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDG-TWVLDT 204
             GH+ KDC+ ++       NT        + +V    +      +   +  G  W+LD+
Sbjct: 276 KEGHFKKDCSDKR------QNTIKKTVNEGDAAVILDGYDSAKVLNVAEMDSGKEWILDS 329

Query: 203 GATYHICPYRDWFSSFEELD-GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPA 27
           G ++H+CP + WF  F+E + G V +GNN  C+++G   VRIK +DG+ R L+ VR++P 
Sbjct: 330 GCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTSIVRIKHYDGIERVLEVVRYIPE 389

Query: 26  IKKNLISL 3
           +K+NLISL
Sbjct: 390 LKRNLISL 397


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  139 bits (349), Expect = 3e-30
 Identities = 79/247 (31%), Positives = 132/247 (53%), Gaps = 2/247 (0%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+  + +++A+LV+ + + +DE+  L L+ SLP  YE     ++  +D++T AEV   L+
Sbjct: 122 HISVFKEIVADLVSMEVQFDDEDLGLLLLCSLPSSYENFRDTILLSRDELTLAEVYEALQ 181

Query: 557 SEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCHD 378
           + E  K   +  AS +  + L  +GRS                        K  C +C  
Sbjct: 182 NREKMKGMVQSDASSSKGEALQVKGRSEQRTYNDSNDRDKSKSRGRSKSRGKKFCKYCKK 241

Query: 377 FGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDTGA 198
             H+ K+C K + +E+  S+ + ++    + S D+ D    V  + C  +   W+LDT  
Sbjct: 242 KIHFIKECWKLQNKEKRKSDGKASVVTSAKNS-DSGD--CLVVFAGCVASHDEWILDTAC 298

Query: 197 TYHICPYRDWFSSFEELDGE--VRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAI 24
           ++HI   RDWFSS++ +     VRMGN++   ++GIGSV+IK HDG+ R LK+VR +P +
Sbjct: 299 SFHIYINRDWFSSYKSVQNGDVVRMGNDNPREIVGIGSVQIKTHDGITRTLKDVRHIPGM 358

Query: 23  KKNLISL 3
            +NLISL
Sbjct: 359 ARNLISL 365


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  137 bits (346), Expect = 6e-30
 Identities = 82/249 (32%), Positives = 133/249 (53%), Gaps = 4/249 (1%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+  + K++A+LV+ + K +DE+  L L+ SLP  Y      ++  +D++T  EV   L+
Sbjct: 118 HMAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQ 177

Query: 557 SEEFRK-MDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCH 381
           ++E  K M + D +S +  + L  RGR T+                 +    K  C +C 
Sbjct: 178 NKEKMKIMVQNDGSSSSKGEALHVRGR-TENRTSNEKNYDRRGRSKSKPPGNKKFCVYCK 236

Query: 380 DFGHWAKDCTKRKARERDNSNT-EVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDT 204
              H   +C K +A+ER N    +V++A       D+ D    V  + C      W+LD+
Sbjct: 237 LKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGD--CLVVFAGCVAGHDEWILDS 294

Query: 203 GATYHICPYRDWFSSFEELD--GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVP 30
             ++HIC  R+WFSS++ +     VRMG+++ C ++GIGSV+IK  DGM R LK VR++P
Sbjct: 295 ACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIP 354

Query: 29  AIKKNLISL 3
            + +NLISL
Sbjct: 355 GMSRNLISL 363


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  137 bits (346), Expect = 6e-30
 Identities = 82/249 (32%), Positives = 133/249 (53%), Gaps = 4/249 (1%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+  + K++A+LV+ + K +DE+  L L+ SLP  Y      ++  +D++T  EV   L+
Sbjct: 118 HMAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQ 177

Query: 557 SEEFRK-MDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCH 381
           ++E  K M + D +S +  + L  RGR T+                 +    K  C +C 
Sbjct: 178 NKEKMKIMVQNDGSSSSKGEALHVRGR-TENRTSNEKNYDRRGRSKSKPPGNKKFCVYCK 236

Query: 380 DFGHWAKDCTKRKARERDNSNT-EVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDT 204
              H   +C K +A+ER N    +V++A       D+ D    V  + C      W+LD+
Sbjct: 237 LKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGD--CLVVFAGCVAGHDEWILDS 294

Query: 203 GATYHICPYRDWFSSFEELD--GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVP 30
             ++HIC  R+WFSS++ +     VRMG+++ C ++GIGSV+IK  DGM R LK VR++P
Sbjct: 295 ACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIP 354

Query: 29  AIKKNLISL 3
            + +NLISL
Sbjct: 355 GMSRNLISL 363


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score =  137 bits (346), Expect = 6e-30
 Identities = 82/249 (32%), Positives = 133/249 (53%), Gaps = 4/249 (1%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+  + K++A+LV+ + K +DE+  L L+ SLP  Y      ++  +D++T  EV   L+
Sbjct: 118 HMAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQ 177

Query: 557 SEEFRK-MDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCH 381
           ++E  K M + D +S +  + L  RGR T+                 +    K  C +C 
Sbjct: 178 NKEKMKIMVQNDGSSSSKGEALHVRGR-TENRTSNEKNYDRRGRSKSKPPGNKKFCVYCK 236

Query: 380 DFGHWAKDCTKRKARERDNSNT-EVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDT 204
              H   +C K +A+ER N    +V++A       D+ D    V  + C      W+LD+
Sbjct: 237 LKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGD--CLVVFAGCVAGHDEWILDS 294

Query: 203 GATYHICPYRDWFSSFEELD--GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVP 30
             ++HIC  R+WFSS++ +     VRMG+++ C ++GIGSV+IK  DGM R LK VR++P
Sbjct: 295 ACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIP 354

Query: 29  AIKKNLISL 3
            + +NLISL
Sbjct: 355 GMSRNLISL 363


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  137 bits (345), Expect = 7e-30
 Identities = 82/249 (32%), Positives = 133/249 (53%), Gaps = 4/249 (1%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+  + K++A+LV+ + K +DE+  L L+ SLP  Y      ++  +D++T  EV   L+
Sbjct: 120 HIAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQ 179

Query: 557 SEEFRK-MDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCH 381
           ++E  K M + D +S +  + L  RGR T+                 +    K  C +C 
Sbjct: 180 NKEKMKIMVQNDGSSSSKGEALHVRGR-TENKTSNEKNYDRRGRSKSKPPGNKKFCVYCK 238

Query: 380 DFGHWAKDCTKRKARERDNSNT-EVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDT 204
              H   +C K +A+ER N    +V++A       D+ D    V  + C      W+LD+
Sbjct: 239 LKNHNIDECKKVQAKERKNKKDGKVSVASAAVSDDDSGD--CLVVFAGCVAGHDEWILDS 296

Query: 203 GATYHICPYRDWFSSFEELD--GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVP 30
             ++HIC  R+WFSS++ +     VRMG+++ C ++GIGSV+IK  DGM R LK VR++P
Sbjct: 297 ACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIP 356

Query: 29  AIKKNLISL 3
            + +NLISL
Sbjct: 357 GMSRNLISL 365


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  137 bits (345), Expect = 7e-30
 Identities = 82/257 (31%), Positives = 133/257 (51%), Gaps = 11/257 (4%)
 Frame = -1

Query: 740 EHLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTL 561
           +HL ++ +++A+L + + K ++E+  L L+ SLP  Y      +++ +D +T  EV   L
Sbjct: 28  DHLSAFKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDAL 87

Query: 560 RSEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRT--RLQKDECAW 387
            ++E  K       S +  + L+ RGR  +                 R+  R +   C +
Sbjct: 88  HAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTNNKSRDKSSSIYRGRSKSRGRYKSCKY 147

Query: 386 CHDFGHWAKDCTKRKARERDNSNTEVNIAKGNEESV--------DASDFSLTVTPSACTI 231
           C   GH   +C K + +++    T   I KG +E          + SD  L V  + C  
Sbjct: 148 CKRDGHDISECWKLQDKDK---RTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQ 204

Query: 230 TDGTWVLDTGATYHICPYRDWFSSFEELD-GEVRMGNNHTCRVIGIGSVRIKMHDGMVRE 54
           T   W+LDT  TYH+CP RDWF+++E +  G V MG++  C V GIG+V+IKM DG +R 
Sbjct: 205 TSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 264

Query: 53  LKEVRFVPAIKKNLISL 3
           L +VR +P +K++LISL
Sbjct: 265 LLDVRHIPNLKRSLISL 281


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score =  137 bits (344), Expect = 1e-29
 Identities = 77/247 (31%), Positives = 130/247 (52%), Gaps = 2/247 (0%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+  + +++A+LV+ + + +DE+  L L+ SLP  Y      ++  + ++T AEV   L+
Sbjct: 17  HISVFKEIVADLVSMEVQFDDEDLGLLLLCSLPSSYANFRDTILLSRSELTLAEVYEALQ 76

Query: 557 SEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCHD 378
           + E  K   +  AS +  + L  RGRS                        K  C +C  
Sbjct: 77  NREKMKGMVQSDASSSKGEALQVRGRSEQRTYNDSNDRDKNQSRGRSKSRGKKFCKYCKK 136

Query: 377 FGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDTGA 198
             H+ ++C K + +E+  S+ + ++    + S D+ D  +      C  +   W+LDT  
Sbjct: 137 KNHFIEECWKLQNKEKRKSDGKASVVTSADNS-DSGDCLVVFV--VCVSSHDEWILDTTC 193

Query: 197 TYHICPYRDWFSSFEELDGE--VRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAI 24
           ++HIC  RDWFSS++ +     VRMG+++   ++GIGSV+IK HDGM R LK+VR +P +
Sbjct: 194 SFHICINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPRM 253

Query: 23  KKNLISL 3
            +NLISL
Sbjct: 254 ARNLISL 260


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
           Group] gi|22655747|gb|AAN04164.1| Putative
           retrotransposon protein [Oryza sativa Japonica Group]
           gi|31431214|gb|AAP53029.1| retrotransposon protein,
           putative, Ty1-copia subclass, expressed [Oryza sativa
           Japonica Group]
          Length = 1229

 Score =  135 bits (341), Expect = 2e-29
 Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 2/247 (0%)
 Frame = -1

Query: 737 HLDSYNKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTTLR 558
           H+  + +++A+LV+ + + +DE+  L L+ SLP  Y      ++  +D++T AEV   L+
Sbjct: 119 HISVFKEIIADLVSMEVQFDDEDLGLLLLCSLPSLYANFRDTILLSRDELTLAEVYEALQ 178

Query: 557 SEEFRKMDREDLASEANNDLLLARGRSTDXXXXXXXXXXXXXXXXXRTRLQKDECAWCHD 378
           + E  K   +  AS +    L  RGRS                        K  C +C  
Sbjct: 179 NREKMKGMVQSDASSSKGKALQVRGRSEQRTYNDSNDRDKSQSRGRSKSRGKKFCKYCKK 238

Query: 377 FGHWAKDCTKRKARERDNSNTEVNIAKGNEESVDASDFSLTVTPSACTITDGTWVLDTGA 198
             H+ ++C K + +E+  S+ + ++    E S D++D    V  + C  +   W+LDT  
Sbjct: 239 KNHFIEECWKLQNKEKRKSDGKASVVTSAENS-DSAD--CLVFFAGCVASHDEWILDTAC 295

Query: 197 TYHICPYRDWFSSFEELDGE--VRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAI 24
            + IC  RDWFSS + +     VRMG+N+   ++GIGSV+IK HDGM R LK+VR +P +
Sbjct: 296 LFLICINRDWFSSHKSVQNGDVVRMGDNNPREIMGIGSVQIKTHDGMTRTLKDVRHIPGM 355

Query: 23  KKNLISL 3
            +NLISL
Sbjct: 356 ARNLISL 362