BLASTX nr result
ID: Papaver31_contig00043041
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00043041
(514 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006837438.2| PREDICTED: nuclear pore complex protein NUP9... 70 8e-24
gb|ERN00292.1| hypothetical protein AMTR_s00107p00047780 [Ambore... 70 8e-24
ref|XP_006402886.1| hypothetical protein EUTSA_v10005836mg [Eutr... 66 7e-22
ref|XP_010507685.1| PREDICTED: uncharacterized protein At2g41620... 74 1e-21
ref|XP_007028698.1| Nucleoporin interacting component (Nup93/Nic... 85 1e-19
ref|XP_007028699.1| Nucleoporin interacting component (Nup93/Nic... 85 1e-19
ref|XP_006295564.1| hypothetical protein CARUB_v10024671mg [Caps... 80 2e-19
gb|KFK37006.1| hypothetical protein AALP_AA4G200100 [Arabis alpina] 81 3e-19
ref|XP_010517655.1| PREDICTED: uncharacterized protein At2g41620... 79 5e-19
ref|XP_010512908.1| PREDICTED: uncharacterized protein At2g41620... 79 5e-19
ref|XP_006411426.1| hypothetical protein EUTSA_v10016231mg [Eutr... 78 8e-19
ref|NP_565951.1| Nup93/Nic96 nucleoporin interacting component-c... 78 1e-18
ref|XP_009384164.1| PREDICTED: uncharacterized protein At2g41620... 86 1e-18
ref|XP_008346625.1| PREDICTED: uncharacterized protein At2g41620... 83 2e-18
ref|XP_008356530.1| PREDICTED: uncharacterized protein At2g41620... 83 2e-18
emb|CDY06913.1| BnaA04g24020D [Brassica napus] 76 3e-18
ref|XP_013635759.1| PREDICTED: nuclear pore complex protein NUP9... 76 4e-18
ref|XP_013687825.1| PREDICTED: nuclear pore complex protein NUP9... 76 4e-18
ref|XP_008780113.1| PREDICTED: uncharacterized protein At2g41620... 81 5e-18
ref|XP_013744958.1| PREDICTED: nuclear pore complex protein NUP9... 76 7e-18
>ref|XP_006837438.2| PREDICTED: nuclear pore complex protein NUP93A [Amborella
trichopoda]
Length = 864
Score = 70.1 bits (170), Expect(3) = 8e-24
Identities = 41/70 (58%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Frame = -1
Query: 325 PAIFSTIEDLLWFKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH-- 152
P++F+TIED LWFKLSA RD G SSS + NEG+V NLDDLQ Y NKFE +
Sbjct: 444 PSLFNTIEDFLWFKLSAVRDVEG---RSSSAVHNEGVV--PYNLDDLQGYLNKFEASYYT 498
Query: 151 --GTDPLVYP 128
G DPLVYP
Sbjct: 499 KNGKDPLVYP 508
Score = 55.8 bits (133), Expect(3) = 8e-24
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -3
Query: 512 AEWISTGSMVSQDCSCCYR-KM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLR 336
AEWI TG MVS + + + K +RM D GR GY KKKL L+AI SGS +QID++LR
Sbjct: 382 AEWILTGGMVSAETAAAASDECDKMLRMPDRSGRGGYDKKKLLLYAITSGSRRQIDRILR 441
Score = 31.2 bits (69), Expect(3) = 8e-24
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLPVV-HLSKETGVGGFNI 49
YVLLLSIQLLP V +LSKE G+++
Sbjct: 509 YVLLLSIQLLPAVQYLSKEPSNEGYSL 535
>gb|ERN00292.1| hypothetical protein AMTR_s00107p00047780 [Amborella trichopoda]
Length = 848
Score = 70.1 bits (170), Expect(3) = 8e-24
Identities = 41/70 (58%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Frame = -1
Query: 325 PAIFSTIEDLLWFKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH-- 152
P++F+TIED LWFKLSA RD G SSS + NEG+V NLDDLQ Y NKFE +
Sbjct: 444 PSLFNTIEDFLWFKLSAVRDVEG---RSSSAVHNEGVV--PYNLDDLQGYLNKFEASYYT 498
Query: 151 --GTDPLVYP 128
G DPLVYP
Sbjct: 499 KNGKDPLVYP 508
Score = 55.8 bits (133), Expect(3) = 8e-24
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -3
Query: 512 AEWISTGSMVSQDCSCCYR-KM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLR 336
AEWI TG MVS + + + K +RM D GR GY KKKL L+AI SGS +QID++LR
Sbjct: 382 AEWILTGGMVSAETAAAASDECDKMLRMPDRSGRGGYDKKKLLLYAITSGSRRQIDRILR 441
Score = 31.2 bits (69), Expect(3) = 8e-24
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLPVV-HLSKETGVGGFNI 49
YVLLLSIQLLP V +LSKE G+++
Sbjct: 509 YVLLLSIQLLPAVQYLSKEPSNEGYSL 535
>ref|XP_006402886.1| hypothetical protein EUTSA_v10005836mg [Eutrema salsugineum]
gi|557103985|gb|ESQ44339.1| hypothetical protein
EUTSA_v10005836mg [Eutrema salsugineum]
Length = 639
Score = 66.2 bits (160), Expect(3) = 7e-22
Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Frame = -1
Query: 319 IFSTIEDLLWFKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH---- 152
+F+TIED LWFKLS RD G SSSV+ N+G+V +L DLQ Y NKFEP +
Sbjct: 243 LFNTIEDFLWFKLSCIRDVASG---SSSVVFNDGLV--PYSLYDLQAYLNKFEPSYYTKN 297
Query: 151 GTDPLVYP 128
G DPLVYP
Sbjct: 298 GKDPLVYP 305
Score = 47.4 bits (111), Expect(3) = 7e-22
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -3
Query: 446 KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLRGLST 324
K +R+GD +G+ Y KKKL L+ IISGS +QID++LR ST
Sbjct: 202 KLLRLGDRLGQTTYDKKKLLLYTIISGSRRQIDRILRDFST 242
Score = 37.0 bits (84), Expect(3) = 7e-22
Identities = 19/27 (70%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLSIQLLP ++H+S E G GFNI
Sbjct: 306 YVLLLSIQLLPAIMHMSTEAGDEGFNI 332
>ref|XP_010507685.1| PREDICTED: uncharacterized protein At2g41620-like [Camelina sativa]
Length = 922
Score = 73.9 bits (180), Expect(3) = 1e-21
Identities = 42/71 (59%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Frame = -1
Query: 328 LPAIFSTIEDLLWFKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH- 152
L +F+TIED LWFKLS RD GG SSSV+LN+G L +LDDLQ Y NKFEP +
Sbjct: 501 LSTLFNTIEDFLWFKLSCIRDVTGG---SSSVVLNDG--LAPYSLDDLQAYLNKFEPSYY 555
Query: 151 ---GTDPLVYP 128
G DPLVYP
Sbjct: 556 TKNGKDPLVYP 566
Score = 42.0 bits (97), Expect(3) = 1e-21
Identities = 21/27 (77%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLSIQLLP ++HLSKE G GG+NI
Sbjct: 567 YVLLLSIQLLPAIMHLSKEAGDGGYNI 593
Score = 33.5 bits (75), Expect(3) = 1e-21
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = -3
Query: 401 KKKLRLHAIISGSCKQIDQLLRGLST 324
+KKL L+ IISGS +QI+++LR LST
Sbjct: 478 QKKLLLYTIISGSRRQIERILRDLST 503
>ref|XP_007028698.1| Nucleoporin interacting component (Nup93/Nic96-like) family protein
isoform 1 [Theobroma cacao] gi|508717303|gb|EOY09200.1|
Nucleoporin interacting component (Nup93/Nic96-like)
family protein isoform 1 [Theobroma cacao]
Length = 865
Score = 84.7 bits (208), Expect(2) = 1e-19
Identities = 56/118 (47%), Positives = 70/118 (59%), Gaps = 8/118 (6%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYD----FMLSYLVHANRLTSCLGVYLPAIFSTIEDLLW 290
E+CEKM G + R +YD + + + + R L LP++FSTIED LW
Sbjct: 400 EECEKMFRMGD-----RVGRAAYDKKKLLLYAIISGSRRQVDRLLRDLPSLFSTIEDFLW 454
Query: 289 FKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
F LSA RD PGG +SSV+LNEG+V +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 455 FILSAVRDLPGG---TSSVILNEGLV--PYSLDDLQAYLNKFEPSYYTKNGKDPLVYP 507
Score = 38.5 bits (88), Expect(2) = 1e-19
Identities = 21/27 (77%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLPVV-HLSKETGVGGFNI 49
YVLLLSIQLLP V +LSKETG G+NI
Sbjct: 508 YVLLLSIQLLPAVSYLSKETGDEGYNI 534
Score = 59.7 bits (143), Expect = 8e-07
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = -3
Query: 509 EWISTGSMVSQDCS-CCYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLRG 333
EWI++G MV D + + K RMGD +GR Y KKKL L+AIISGS +Q+D+LLR
Sbjct: 382 EWINSGGMVPADIAVAAAEECEKMFRMGDRVGRAAYDKKKLLLYAIISGSRRQVDRLLRD 441
Query: 332 L 330
L
Sbjct: 442 L 442
>ref|XP_007028699.1| Nucleoporin interacting component (Nup93/Nic96-like) family protein
isoform 2 [Theobroma cacao] gi|508717304|gb|EOY09201.1|
Nucleoporin interacting component (Nup93/Nic96-like)
family protein isoform 2 [Theobroma cacao]
Length = 664
Score = 84.7 bits (208), Expect(2) = 1e-19
Identities = 56/118 (47%), Positives = 70/118 (59%), Gaps = 8/118 (6%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYD----FMLSYLVHANRLTSCLGVYLPAIFSTIEDLLW 290
E+CEKM G + R +YD + + + + R L LP++FSTIED LW
Sbjct: 400 EECEKMFRMGD-----RVGRAAYDKKKLLLYAIISGSRRQVDRLLRDLPSLFSTIEDFLW 454
Query: 289 FKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
F LSA RD PGG +SSV+LNEG+V +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 455 FILSAVRDLPGG---TSSVILNEGLV--PYSLDDLQAYLNKFEPSYYTKNGKDPLVYP 507
Score = 38.5 bits (88), Expect(2) = 1e-19
Identities = 21/27 (77%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLPVV-HLSKETGVGGFNI 49
YVLLLSIQLLP V +LSKETG G+NI
Sbjct: 508 YVLLLSIQLLPAVSYLSKETGDEGYNI 534
Score = 59.7 bits (143), Expect = 8e-07
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = -3
Query: 509 EWISTGSMVSQDCS-CCYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLRG 333
EWI++G MV D + + K RMGD +GR Y KKKL L+AIISGS +Q+D+LLR
Sbjct: 382 EWINSGGMVPADIAVAAAEECEKMFRMGDRVGRAAYDKKKLLLYAIISGSRRQVDRLLRD 441
Query: 332 L 330
L
Sbjct: 442 L 442
>ref|XP_006295564.1| hypothetical protein CARUB_v10024671mg [Capsella rubella]
gi|482564272|gb|EOA28462.1| hypothetical protein
CARUB_v10024671mg [Capsella rubella]
Length = 861
Score = 80.1 bits (196), Expect(2) = 2e-19
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYDFMLSYLVHANRLTSCLGVYLPAIFSTIEDLLWFKLS 278
E+CEKML G L +K + + + + R + L +F+TIED LWFKLS
Sbjct: 398 EECEKMLRMGDRLGRTAYDKKKL-LLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLS 456
Query: 277 AARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
RD GG SSSV+LN+G L NLDDLQ Y NKFEP + G DPLVYP
Sbjct: 457 CIRDVTGG---SSSVVLNDG--LAPYNLDDLQAYLNKFEPSYYTKNGKDPLVYP 505
Score = 42.0 bits (97), Expect(2) = 2e-19
Identities = 21/27 (77%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLSIQLLP ++HLSKE G GG+NI
Sbjct: 506 YVLLLSIQLLPAIMHLSKEAGDGGYNI 532
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -3
Query: 509 EWISTGSMVS-QDCSCCYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLRG 333
EWI+T MV+ + + + K +RMGD +GR Y KKKL L+ IISGS +QI+++LR
Sbjct: 380 EWITTDGMVAAESAAIASEECEKMLRMGDRLGRTAYDKKKLLLYTIISGSRRQIERILRD 439
Query: 332 LST 324
LST
Sbjct: 440 LST 442
>gb|KFK37006.1| hypothetical protein AALP_AA4G200100 [Arabis alpina]
Length = 862
Score = 80.9 bits (198), Expect(2) = 3e-19
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYDFMLSYLVHANRLTSCLGVYLPAIFSTIEDLLWFKLS 278
E+CEKML G L +K + + + + R + L +F+TIED LWFKLS
Sbjct: 398 EECEKMLRMGDRLGRTAYDKKKL-LLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLS 456
Query: 277 AARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
RD GG +SSSV+LN+G LT +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 457 CIRDVTGG--SSSSVVLNDG--LTPYSLDDLQAYLNKFEPSYYTKNGKDPLVYP 506
Score = 40.8 bits (94), Expect(2) = 3e-19
Identities = 20/27 (74%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLS+QLLP ++HLSKE G GG+NI
Sbjct: 507 YVLLLSVQLLPAILHLSKEGGDGGYNI 533
Score = 58.2 bits (139), Expect = 2e-06
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -3
Query: 509 EWISTGSMVSQDCSC-CYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLRG 333
EWI+T MV+ + + + K +RMGD +GR Y KKKL L+ IISGS +QI+++LR
Sbjct: 380 EWITTDGMVATETAALASEECEKMLRMGDRLGRTAYDKKKLLLYTIISGSRRQIERILRD 439
Query: 332 LST 324
LST
Sbjct: 440 LST 442
>ref|XP_010517655.1| PREDICTED: uncharacterized protein At2g41620 [Camelina sativa]
Length = 861
Score = 79.0 bits (193), Expect(2) = 5e-19
Identities = 55/118 (46%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYD----FMLSYLVHANRLTSCLGVYLPAIFSTIEDLLW 290
E+CEKML G L R SYD + + + + R + L +F+TIED LW
Sbjct: 398 EECEKMLRMGDRL-----GRTSYDKKKLLLYTIISGSRRQIERILRDLSTLFNTIEDFLW 452
Query: 289 FKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
FKLS RD GG SSSV+LN+G L +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 453 FKLSCIRDVTGG---SSSVVLNDG--LAPYSLDDLQAYLNKFEPSYYTKNGKDPLVYP 505
Score = 42.0 bits (97), Expect(2) = 5e-19
Identities = 21/27 (77%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLSIQLLP ++HLSKE G GG+NI
Sbjct: 506 YVLLLSIQLLPAIMHLSKEAGDGGYNI 532
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -3
Query: 509 EWISTGSMVS-QDCSCCYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLRG 333
EWI+T MV+ + + + K +RMGD +GR Y KKKL L+ IISGS +QI+++LR
Sbjct: 380 EWITTDGMVAAESAAIASEECEKMLRMGDRLGRTSYDKKKLLLYTIISGSRRQIERILRD 439
Query: 332 LST 324
LST
Sbjct: 440 LST 442
>ref|XP_010512908.1| PREDICTED: uncharacterized protein At2g41620-like, partial
[Camelina sativa]
Length = 562
Score = 79.0 bits (193), Expect(2) = 5e-19
Identities = 55/118 (46%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYD----FMLSYLVHANRLTSCLGVYLPAIFSTIEDLLW 290
E+CEKML G L R SYD + + + + R + L +F+TIED LW
Sbjct: 426 EECEKMLRMGDRL-----GRTSYDKKKLLLYTIISGSRRQIERILRDLSTLFNTIEDFLW 480
Query: 289 FKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
FKLS RD GG SSSV+LN+G L +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 481 FKLSCIRDVTGG---SSSVVLNDG--LAPYSLDDLQAYLNKFEPSYYTKNGKDPLVYP 533
Score = 42.0 bits (97), Expect(2) = 5e-19
Identities = 21/27 (77%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLSIQLLP ++HLSKE G GG+NI
Sbjct: 534 YVLLLSIQLLPAIMHLSKEAGDGGYNI 560
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -3
Query: 509 EWISTGSMVS-QDCSCCYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLRG 333
EWI+T MV+ + + + K +RMGD +GR Y KKKL L+ IISGS +QI+++LR
Sbjct: 408 EWITTDGMVAAESAAIASEECEKMLRMGDRLGRTSYDKKKLLLYTIISGSRRQIERILRD 467
Query: 332 LST 324
LST
Sbjct: 468 LST 470
>ref|XP_006411426.1| hypothetical protein EUTSA_v10016231mg [Eutrema salsugineum]
gi|557112595|gb|ESQ52879.1| hypothetical protein
EUTSA_v10016231mg [Eutrema salsugineum]
Length = 861
Score = 78.2 bits (191), Expect(2) = 8e-19
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYDFMLSYLVHANRLTSCLGVYLPAIFSTIEDLLWFKLS 278
E+CEKML G L +K + + + + R + L +F+TIED LWFKLS
Sbjct: 398 EECEKMLRMGDRLGRTAYDKKKL-LLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLS 456
Query: 277 AARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
RD GG SSSV+LN+G L +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 457 CIRDVAGG---SSSVVLNDG--LAPYSLDDLQAYLNKFEPSYYTKNGKDPLVYP 505
Score = 42.0 bits (97), Expect(2) = 8e-19
Identities = 21/27 (77%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLSIQLLP ++HLSKE G GG+NI
Sbjct: 506 YVLLLSIQLLPAIMHLSKEAGDGGYNI 532
Score = 58.2 bits (139), Expect = 2e-06
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -3
Query: 509 EWISTGSMVSQDCSC-CYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLRG 333
EWI+T MV+ + + + K +RMGD +GR Y KKKL L+ IISGS +QI+++LR
Sbjct: 380 EWITTDGMVAAETAAIASEECEKMLRMGDRLGRTAYDKKKLLLYTIISGSRRQIERILRD 439
Query: 332 LST 324
LST
Sbjct: 440 LST 442
>ref|NP_565951.1| Nup93/Nic96 nucleoporin interacting component-containing protein
[Arabidopsis thaliana]
gi|21542465|sp|O22224.2|NP93A_ARATH RecName:
Full=Nuclear pore complex protein NUP93A; AltName:
Full=Nucleoporin 93A gi|14334432|gb|AAK59414.1| unknown
protein [Arabidopsis thaliana]
gi|20196948|gb|AAB84345.2| expressed protein
[Arabidopsis thaliana] gi|21281026|gb|AAM44953.1|
unknown protein [Arabidopsis thaliana]
gi|330254914|gb|AEC10008.1| Nup93/Nic96 nucleoporin
interacting component-containing protein [Arabidopsis
thaliana]
Length = 861
Score = 78.2 bits (191), Expect(2) = 1e-18
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYDFMLSYLVHANRLTSCLGVYLPAIFSTIEDLLWFKLS 278
E+CEKML G L +K + + + + R + L +F+TIED LWFKLS
Sbjct: 398 EECEKMLRMGDRLGRTAYDKKKL-LLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLS 456
Query: 277 AARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
RD GG SSSV+LN+G L +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 457 CIRDVTGG---SSSVVLNDG--LAPYSLDDLQAYLNKFEPSYYTKNGKDPLVYP 505
Score = 41.6 bits (96), Expect(2) = 1e-18
Identities = 20/27 (74%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLS+QLLP ++HLSKE G GG+NI
Sbjct: 506 YVLLLSVQLLPAIMHLSKEAGDGGYNI 532
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -3
Query: 509 EWISTGSMVS-QDCSCCYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLRG 333
EWI+T MV+ + + + K +RMGD +GR Y KKKL L+ IISGS +QI+++LR
Sbjct: 380 EWITTDGMVAAESAAIASEECEKMLRMGDRLGRTAYDKKKLLLYTIISGSRRQIERILRD 439
Query: 332 LST 324
LST
Sbjct: 440 LST 442
>ref|XP_009384164.1| PREDICTED: uncharacterized protein At2g41620 [Musa acuminata subsp.
malaccensis]
Length = 863
Score = 86.3 bits (212), Expect(2) = 1e-18
Identities = 56/122 (45%), Positives = 72/122 (59%), Gaps = 4/122 (3%)
Frame = -1
Query: 481 PKXXXXXTEKCEKMLGWGI*LVDLGITRKSYDFMLSYLVHANRLTSCLGVYLPAIFSTIE 302
P+ +E+CEK+L G G RK + + + + R L +P++F TIE
Sbjct: 392 PETAAVASEECEKLLRMGDRAGRPGYDRKKL-LLYAIISGSRRQVERLLRDVPSLFGTIE 450
Query: 301 DLLWFKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLV 134
D LWFKLSA RD PGG SSS++L+EG+V NLDDLQ Y NKFEP + G DPLV
Sbjct: 451 DFLWFKLSAIRDCPGG---SSSIVLSEGLV--PYNLDDLQGYLNKFEPSYYTKNGKDPLV 505
Query: 133 YP 128
YP
Sbjct: 506 YP 507
Score = 33.1 bits (74), Expect(2) = 1e-18
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLSIQ LP V++L KE G G+N+
Sbjct: 508 YVLLLSIQFLPAVLYLFKEVGEEGYNV 534
Score = 59.7 bits (143), Expect = 8e-07
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 512 AEWISTGSMVSQDCSC-CYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLR 336
AEWI++G VS + + + K +RMGD GRPGY +KKL L+AIISGS +Q+++LLR
Sbjct: 381 AEWIASGGSVSPETAAVASEECEKLLRMGDRAGRPGYDRKKLLLYAIISGSRRQVERLLR 440
>ref|XP_008346625.1| PREDICTED: uncharacterized protein At2g41620-like [Malus domestica]
Length = 907
Score = 82.8 bits (203), Expect(2) = 2e-18
Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 8/118 (6%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYD---FMLSYLVHANRLT-SCLGVYLPAIFSTIEDLLW 290
E+CEKML +VD + R +YD +L LV +R L LP +F+TIED LW
Sbjct: 445 EECEKMLR----MVDR-VGRAAYDKKKLLLYALVSGSRKQIDRLLRDLPTLFNTIEDFLW 499
Query: 289 FKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
FKLSA RD PGGGA +++NE +V LDDLQ+Y NKF+P + G DPLVYP
Sbjct: 500 FKLSAVRDCPGGGA---PIVMNESLV--PYTLDDLQIYLNKFDPSYYTKXGKDPLVYP 552
Score = 35.8 bits (81), Expect(2) = 2e-18
Identities = 19/27 (70%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLSIQL+P V++L KETG G+NI
Sbjct: 553 YVLLLSIQLIPGVLYLFKETGDEGYNI 579
Score = 58.2 bits (139), Expect = 2e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Frame = -3
Query: 509 EWISTGSMV--------SQDCSCCYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQ 354
EWI+TG MV S++C K +RM D +GR Y KKKL L+A++SGS KQ
Sbjct: 427 EWINTGGMVPAAIAASASEECE-------KMLRMVDRVGRAAYDKKKLLLYALVSGSRKQ 479
Query: 353 IDQLLRGLST 324
ID+LLR L T
Sbjct: 480 IDRLLRDLPT 489
>ref|XP_008356530.1| PREDICTED: uncharacterized protein At2g41620-like [Malus domestica]
Length = 862
Score = 82.8 bits (203), Expect(2) = 2e-18
Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 8/118 (6%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYD---FMLSYLVHANRLT-SCLGVYLPAIFSTIEDLLW 290
E+CEKML +VD + R +YD +L LV +R L LP +F+TIED LW
Sbjct: 400 EECEKMLR----MVDR-VGRAAYDKKKLLLYALVSGSRKQIDRLLRDLPTLFNTIEDFLW 454
Query: 289 FKLSAARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
FKLSA RD PGGGA +++NE +V LDDLQ+Y NKF+P + G DPLVYP
Sbjct: 455 FKLSAVRDCPGGGA---PIVMNESLV--PYTLDDLQIYLNKFDPSYYTKXGKDPLVYP 507
Score = 35.8 bits (81), Expect(2) = 2e-18
Identities = 19/27 (70%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLSIQL+P V++L KETG G+NI
Sbjct: 508 YVLLLSIQLIPGVLYLFKETGDEGYNI 534
Score = 58.2 bits (139), Expect = 2e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Frame = -3
Query: 509 EWISTGSMV--------SQDCSCCYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQ 354
EWI+TG MV S++C K +RM D +GR Y KKKL L+A++SGS KQ
Sbjct: 382 EWINTGGMVPAAIAASASEECE-------KMLRMVDRVGRAAYDKKKLLLYALVSGSRKQ 434
Query: 353 IDQLLRGLST 324
ID+LLR L T
Sbjct: 435 IDRLLRDLPT 444
>emb|CDY06913.1| BnaA04g24020D [Brassica napus]
Length = 863
Score = 76.3 bits (186), Expect(2) = 3e-18
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYDFMLSYLVHANRLTSCLGVYLPAIFSTIEDLLWFKLS 278
E+CEKML G L +K + + + + R + L +F+TIED LWFKL+
Sbjct: 399 EECEKMLRMGDRLGRTAYDKKKL-LLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLA 457
Query: 277 AARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
+D GA+SSSV+LN+G L +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 458 CIKDV--AGASSSSVVLNDG--LAPYSLDDLQTYLNKFEPSYYTKNGKDPLVYP 507
Score = 42.0 bits (97), Expect(2) = 3e-18
Identities = 20/27 (74%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLS+QLLP ++HLSKE G GG+NI
Sbjct: 508 YVLLLSVQLLPAIMHLSKEAGEGGYNI 534
>ref|XP_013635759.1| PREDICTED: nuclear pore complex protein NUP93A [Brassica oleracea
var. oleracea]
Length = 863
Score = 76.3 bits (186), Expect(2) = 4e-18
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYDFMLSYLVHANRLTSCLGVYLPAIFSTIEDLLWFKLS 278
E+CEKML G L +K + + + + R + L +F+TIED LWFKL+
Sbjct: 399 EECEKMLRMGDRLGRTAYDKKKL-LLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLA 457
Query: 277 AARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
+D GA+SSSV+LN+G L +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 458 CIKDV--SGASSSSVVLNDG--LAPYSLDDLQAYLNKFEPSYYTKNGKDPLVYP 507
Score = 41.6 bits (96), Expect(2) = 4e-18
Identities = 20/27 (74%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLS+QLLP ++HLSKE G GG+NI
Sbjct: 508 YVLLLSVQLLPAIMHLSKEAGDGGYNI 534
>ref|XP_013687825.1| PREDICTED: nuclear pore complex protein NUP93A [Brassica napus]
gi|674918378|emb|CDY14781.1| BnaC04g47780D [Brassica
napus]
Length = 863
Score = 76.3 bits (186), Expect(2) = 4e-18
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYDFMLSYLVHANRLTSCLGVYLPAIFSTIEDLLWFKLS 278
E+CEKML G L +K + + + + R + L +F+TIED LWFKL+
Sbjct: 399 EECEKMLRMGDRLGRTAYDKKKL-LLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLA 457
Query: 277 AARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
+D GA+SSSV+LN+G L +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 458 CIKDV--SGASSSSVVLNDG--LAPYSLDDLQTYLNKFEPSYYTKNGKDPLVYP 507
Score = 41.6 bits (96), Expect(2) = 4e-18
Identities = 20/27 (74%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLS+QLLP ++HLSKE G GG+NI
Sbjct: 508 YVLLLSVQLLPAIMHLSKEAGDGGYNI 534
>ref|XP_008780113.1| PREDICTED: uncharacterized protein At2g41620-like [Phoenix
dactylifera]
Length = 863
Score = 80.9 bits (198), Expect(2) = 5e-18
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYDFMLSYLVHANRLTSCLGVYLPAIFSTIEDLLWFKLS 278
E+CEKML G G RK + + + R L LP +F+TIED LWFKLS
Sbjct: 400 EECEKMLRMGDRAGRPGYDRKKL-LLYAIISGCRRQIDRLLRDLPTLFNTIEDFLWFKLS 458
Query: 277 AARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
+ RD GG +SSV+L+EG+V +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 459 SVRDCAGG---TSSVVLSEGLV--PYSLDDLQSYLNKFEPSYYTKNGKDPLVYP 507
Score = 36.6 bits (83), Expect(2) = 5e-18
Identities = 19/27 (70%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLSIQLLP V++LS+E G G+NI
Sbjct: 508 YVLLLSIQLLPAVLYLSREVGEDGYNI 534
Score = 66.6 bits (161), Expect = 7e-09
Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Frame = -3
Query: 512 AEWISTGSMVSQD-CSCCYRKM*KNVRMGDLIGRPGYHKKKLRLHAIISGSCKQIDQLLR 336
AEWI++G +VSQ+ + + K +RMGD GRPGY +KKL L+AIISG +QID+LLR
Sbjct: 381 AEWITSGGLVSQETATAASEECEKMLRMGDRAGRPGYDRKKLLLYAIISGCRRQIDRLLR 440
Query: 335 GLST 324
L T
Sbjct: 441 DLPT 444
>ref|XP_013744958.1| PREDICTED: nuclear pore complex protein NUP93A-like [Brassica
napus]
Length = 863
Score = 76.3 bits (186), Expect(2) = 7e-18
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 457 EKCEKMLGWGI*LVDLGITRKSYDFMLSYLVHANRLTSCLGVYLPAIFSTIEDLLWFKLS 278
E+CEKML G L +K + + + + R + L +F+TIED LWFKL+
Sbjct: 399 EECEKMLRMGDRLGRTAYDKKKL-LLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLA 457
Query: 277 AARDPPGGGAASSSVMLNEGMVLTVPNLDDLQVYFNKFEPPH----GTDPLVYP 128
+D GA+SSSV+LN+G L +LDDLQ Y NKFEP + G DPLVYP
Sbjct: 458 CIKDV--SGASSSSVVLNDG--LAPYSLDDLQTYLNKFEPSYYTKNGKDPLVYP 507
Score = 40.8 bits (94), Expect(2) = 7e-18
Identities = 20/27 (74%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Frame = -2
Query: 126 YVLLLSIQLLP-VVHLSKETGVGGFNI 49
YVLLLS+QLLP ++HLSKE G GG NI
Sbjct: 508 YVLLLSVQLLPAIIHLSKEAGEGGCNI 534