BLASTX nr result

ID: Papaver31_contig00042461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00042461
         (984 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010039376.1| PREDICTED: uncharacterized protein LOC104428...    50   2e-09
ref|XP_009105597.1| PREDICTED: uncharacterized protein LOC103831...    53   2e-06
ref|XP_009141427.1| PREDICTED: putative ribonuclease H protein A...    53   2e-06
ref|XP_013616974.1| PREDICTED: uncharacterized protein LOC106323...    42   9e-06

>ref|XP_010039376.1| PREDICTED: uncharacterized protein LOC104428079 [Eucalyptus grandis]
          Length = 1343

 Score = 50.1 bits (118), Expect(3) = 2e-09
 Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
 Frame = +3

Query: 63   SNSDLTLVADPIDSVNKKWNLNLISSMFPARIVS--LISNITHFTNGDNLY*RKIS*DVL 236
            + +D  LVAD ID   K+WN+ L++ +F  +IV+  L   I H    D L          
Sbjct: 916  NRNDPHLVADLIDQERKEWNVPLLNQLFDQKIVNEILTLPIVHQQKDDKLIWTG------ 969

Query: 237  TTSREFTVKSMYDKLNSSIPAPIHSNLGS-------SFCKGLWKLEVSPGIRKFL*KGLQ 395
              S ++TVKS Y+ +N  +  P   N  S       S    LW + + P +R FL    Q
Sbjct: 970  NHSGQYTVKSGYNMIN-DVSLPQECNRASSSYQPPRSLWTKLWHMSIPPKLRIFLWSLCQ 1028

Query: 396  NALSTNHRL 422
            +AL T  +L
Sbjct: 1029 DALPTKEKL 1037



 Score = 33.9 bits (76), Expect(3) = 2e-09
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 771  EKLKEFWKPPAPNQLKINTNTGWLTKEVPSSFALILRNDAGAFEQANAGPS*STTPKEAE 950
            E L   WK P    LK+N ++ W+  +   S A +LR+  G+     A    + +P +AE
Sbjct: 1161 EHLPVTWKAPKTPDLKLNVDSSWIATDSACSVAGLLRDSNGSVIDGFAEEVHAASPLQAE 1220



 Score = 26.2 bits (56), Expect(3) = 2e-09
 Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
 Frame = +2

Query: 458  QKMEHLSPHCHFSKTIWMLRPTPMNFSITNSTNLVEYCRFWMESSNKISNVEKTLTKKNV 637
            + +EH+  HC   K IW      ++   +++T + ++   ++    + S+ E  L  + +
Sbjct: 1056 ETVEHIFLHCQQVKKIWSDPRLNISHVTSSATRMDKWVAEYLLVKTQASDPE--LIVEVL 1113

Query: 638  VYPWKERCTRAFQNN----QVLL*TGIVTQRHINYW-----SKSKPN-NAPLT 766
               WK R    F+      Q L+ T +   R    W     SKSK N + P+T
Sbjct: 1114 WQIWKNRNNFIFRKTHGQPQALIDTALAQNRVSQRWIPTKSSKSKGNEHLPVT 1166


>ref|XP_009105597.1| PREDICTED: uncharacterized protein LOC103831468 [Brassica rapa]
          Length = 773

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
 Frame = +3

Query: 3   IWFDNWIP------NLGSYLAQFRNTSNSDLTLVADPIDSVNKKWNLNLISSMFPARIVS 164
           +W D W+        +G    +F N    DL L           WN +LI  + P    +
Sbjct: 364 VWADPWLSLSAPRRPMGPTPERFANLKVKDLMLPN------GSDWNRDLIQQIMPQEEAT 417

Query: 165 LIS-NITHFTNGDNLY*RKIS*DVLTTSREFTVKSMYDKLNSSIPAPIHSNLGSSFCKGL 341
           ++S   +     D L        + TTS E+T+KS Y K   S P     N    + KG+
Sbjct: 418 ILSIKASRSGTPDKLIW------LGTTSGEYTMKSGYLKALESSPTSPPPNRAIDWNKGV 471

Query: 342 WKLEVSPGIRKFL*KGLQNALSTNHRL 422
           W+LEV+P I+ FL K  Q AL+   RL
Sbjct: 472 WQLEVAPKIKLFLWKIFQGALAIGDRL 498



 Score = 27.3 bits (59), Expect(2) = 2e-06
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
 Frame = +2

Query: 452 DVQKMEHLSPHCHFSKTIWMLRPTPMNFSITNSTNLVEYCRFWMESSNKISNVEKTLTKK 631
           +V+ + HL  HC  +  +W L P     S  +S  L++    W +  +K+  +  T    
Sbjct: 514 NVESINHLFLHCDIAYKVWKLAPFS---SCIDSRRLLDLNTAW-QGLSKLVCLPPTGIST 569

Query: 632 NVVYP------WKERCTRAFQNNQVLL*TGIVTQ--RHINYWSKSKPNNAPLTK 769
             + P      W  R  R F NN++     IV++       W K +    P TK
Sbjct: 570 GPLAPWILWSLWLARNNRLF-NNKISTPEEIVSRATAAAQEWLKEQRTEPPNTK 622


>ref|XP_009141427.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 554

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 45/147 (30%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
 Frame = +3

Query: 3   IWFDNWIP------NLGSYLAQFRNTSNSDLTLVADPIDSVNKKWNLNLISSMFPARIVS 164
           +W D W+        +G    +F N    DL L           WN +LI  + P    +
Sbjct: 145 VWADPWLSLSAPRRPMGPTPERFANLKVKDLMLPN------GSDWNRDLIQQIMPQEEAT 198

Query: 165 LIS-NITHFTNGDNLY*RKIS*DVLTTSREFTVKSMYDKLNSSIPAPIHSNLGSSFCKGL 341
           ++S   +     D L        + TTS E+T KS Y K   S P     N    + KG+
Sbjct: 199 ILSIKASRSGTPDKLIW------LGTTSGEYTTKSGYLKAMESSPTSPPPNRAIDWNKGV 252

Query: 342 WKLEVSPGIRKFL*KGLQNALSTNHRL 422
           W+LEV+P I+ FL K  Q AL+   RL
Sbjct: 253 WQLEVAPKIKLFLWKIFQGALAIGDRL 279



 Score = 27.3 bits (59), Expect(2) = 2e-06
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
 Frame = +2

Query: 452 DVQKMEHLSPHCHFSKTIWMLRPTPMNFSITNSTNLVEYCRFWMESSNKISNVEKTLTKK 631
           +V+ + HL  HC  +  +W L P     S  +S  L++    W +  +K+  +  T    
Sbjct: 295 NVESINHLFLHCDIAYKVWKLAPFS---SCIDSRRLLDLNTAW-QGLSKLVCLPPTGIST 350

Query: 632 NVVYP------WKERCTRAFQNNQVLL*TGIVTQ--RHINYWSKSKPNNAPLTK 769
             + P      W  R  R F NN++     IV++       W K +    P TK
Sbjct: 351 GPLAPCILWSLWLARNNRLF-NNKISTPEEIVSRATAAAQEWLKEQRTEPPNTK 403


>ref|XP_013616974.1| PREDICTED: uncharacterized protein LOC106323383 [Brassica oleracea
           var. oleracea]
          Length = 464

 Score = 42.4 bits (98), Expect(3) = 9e-06
 Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
 Frame = +3

Query: 3   IWFDNWIPNLGSYLAQFRNTSNSDLTL-VADPIDSVNKKWNLNLISSMFPARIVSLISNI 179
           +W+D WI +       +R  S  DLT+ V D ++     WN  L+   F  +   +I  I
Sbjct: 58  VWWDKWIIDYVPRTPDYRPESLVDLTVKVDDLLEPQIGSWNRELVLQTFSQKDADIIFKI 117

Query: 180 TH-FTNGDNLY*RKIS*DVLTTSREFTVKSMYDKLNS-----SIPAPIHSNLGSSFCKGL 341
               +  D++          T +R ++ KS +D L +     S P      +     K +
Sbjct: 118 KPLLSRSDSVVWG------FTKNRVYSSKSGHDLLVASEDLKSPPLAPTPPVEQQLWKSI 171

Query: 342 WKLEVSPGIRKFL*KGLQNALSTNHRL 422
           WK + +P +R FL + L  AL+   RL
Sbjct: 172 WKAKTTPKLRHFLWRILSGALAVKERL 198



 Score = 29.6 bits (65), Expect(3) = 9e-06
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = +3

Query: 765 PKEKLKEFWKPPAPNQLKINTNTGWLTKEVPSSFALILRNDAG-AFEQANAGPS*STTPK 941
           P     + W  P  + +K N    WL   V +  A I+RN  G     +    S  +TP 
Sbjct: 323 PLVSCPKVWTKPPDDWIKCNVGASWLNCSVNNGGAWIVRNPTGMTLLHSRRAFSNVSTPL 382

Query: 942 EAEQRQFCKAPWRL 983
           EA+    C   W +
Sbjct: 383 EAD---LCSLLWSI 393



 Score = 25.0 bits (53), Expect(3) = 9e-06
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
 Frame = +2

Query: 458 QKMEHLSPHCHFSKTIWMLRPTPM-------NFSITNSTNLVEYCRFWMESSNKISNVEK 616
           + + H+   C F++ +W L   PM       N    N  +L++ C+      N +S   +
Sbjct: 217 EDINHVLFQCRFAQDVWSLSAVPMPPSGSWYNSVFLNLYHLMKCCKM-----NTLSPDAR 271

Query: 617 TLTKKNVVYPWKERCTRAFQ 676
            ++   + + WK R    F+
Sbjct: 272 LVSPWLLWHIWKARNAFCFE 291


Top