BLASTX nr result

ID: Papaver31_contig00041873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00041873
         (467 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010244821.1| PREDICTED: snRNA-activating protein complex ...    62   2e-07
ref|XP_012082213.1| PREDICTED: snRNA-activating protein complex ...    59   1e-06
ref|XP_012082212.1| PREDICTED: snRNA-activating protein complex ...    59   1e-06

>ref|XP_010244821.1| PREDICTED: snRNA-activating protein complex subunit [Nelumbo
           nucifera] gi|720089612|ref|XP_010244822.1| PREDICTED:
           snRNA-activating protein complex subunit [Nelumbo
           nucifera]
          Length = 506

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 29/57 (50%), Positives = 42/57 (73%)
 Frame = -3

Query: 177 IEEGLEEEDEQSVCSSIARGGPIYVPDLTSPLIRLGRFEDLVLEELQSLKAELCVDS 7
           +E   + +D+  VC+SI RGGPIYVP+L SP+ R+  FE  ++EEL+ L+AEL +DS
Sbjct: 14  VESHSQRDDD--VCNSIPRGGPIYVPNLVSPITRIAEFEASIIEELRMLEAELFIDS 68


>ref|XP_012082213.1| PREDICTED: snRNA-activating protein complex subunit isoform X2
           [Jatropha curcas]
          Length = 541

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/53 (56%), Positives = 37/53 (69%)
 Frame = -3

Query: 168 GLEEEDEQSVCSSIARGGPIYVPDLTSPLIRLGRFEDLVLEELQSLKAELCVD 10
           G E + E +V  S+ARGGPIYVP+   PL R+  FE  +L ELQ LKAELC+D
Sbjct: 8   GGEGDSETNV--SVARGGPIYVPNFVGPLTRVPEFESALLHELQDLKAELCLD 58


>ref|XP_012082212.1| PREDICTED: snRNA-activating protein complex subunit isoform X1
           [Jatropha curcas]
          Length = 542

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/53 (56%), Positives = 37/53 (69%)
 Frame = -3

Query: 168 GLEEEDEQSVCSSIARGGPIYVPDLTSPLIRLGRFEDLVLEELQSLKAELCVD 10
           G E + E +V  S+ARGGPIYVP+   PL R+  FE  +L ELQ LKAELC+D
Sbjct: 8   GGEGDSETNV--SVARGGPIYVPNFVGPLTRVPEFESALLHELQDLKAELCLD 58


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