BLASTX nr result

ID: Papaver31_contig00041733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00041733
         (655 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010667078.1| PREDICTED: uncharacterized protein LOC104884...    58   6e-06
gb|AFM94019.1| LINE RNAaseH [Beta vulgaris]                            57   7e-06

>ref|XP_010667078.1| PREDICTED: uncharacterized protein LOC104884173 [Beta vulgaris
           subsp. vulgaris]
          Length = 386

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 6/172 (3%)
 Frame = -1

Query: 646 MRISIAAN--DKLIWNLTRNGSFTLKSAYNKLHETILGNMQVSLNIQDTDIS*KCSGRFN 473
           M IS+  N  D+LIWN + +G+F+++S Y +LH+     ++   N+           R  
Sbjct: 1   MVISVRHNESDELIWNFSMDGNFSVRSFYEELHKRSKPCLE---NLPQKIWKGLVPFRIE 57

Query: 472 CGQELNTLSGIHFTYKRRLSRACEYLNCGYSFCSQHDENTMHVMLTCSFSRDVWMLIPCG 293
               L+ L  I+   K            G S CS   E+  H+ L C FS ++W      
Sbjct: 58  IFTWLSVLERINTKKKLASLNIIPPAEVGCSLCSLEPEDISHLFLFCPFSMEIW----AW 113

Query: 292 SSDLSGLH----KDISAIFETWMYQNQ*QTYQSGWLTMTMVVSWTICNERCE 149
             DL  L     K ++     W Y  + + ++  WL   +V+ W+I  ER E
Sbjct: 114 WWDLWNLSWVWPKSLNLALSQWNYPRKEKLFKKIWLAAFIVIIWSIWRERNE 165


>gb|AFM94019.1| LINE RNAaseH [Beta vulgaris]
          Length = 416

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 6/172 (3%)
 Frame = -1

Query: 646 MRISIAAN--DKLIWNLTRNGSFTLKSAYNKLHETILGNMQVSLNIQDTDIS*KCSGRFN 473
           M IS+  N  D+LIWN + +G+F+++S Y +LH+     ++   N+           R  
Sbjct: 31  MVISVRHNESDELIWNFSMDGNFSVRSFYEELHKRSKPCLE---NLPQKIWKGLVPFRIE 87

Query: 472 CGQELNTLSGIHFTYKRRLSRACEYLNCGYSFCSQHDENTMHVMLTCSFSRDVWMLIPCG 293
               L+ L  I+   K            G S CS   E+  H+ L C FS ++W      
Sbjct: 88  IFTWLSVLERINTKKKLASLNIIPPSEVGCSLCSLEPEDISHLFLFCPFSMEIW----AW 143

Query: 292 SSDLSGLH----KDISAIFETWMYQNQ*QTYQSGWLTMTMVVSWTICNERCE 149
             DL  L     K ++     W Y  + + ++  WL   +V+ W+I  ER E
Sbjct: 144 WWDLWNLSWVWPKSLNLALSQWNYPRKEKLFKKIWLAAFIVIIWSIWRERNE 195


Top