BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00041244
         (2799 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   520   0.0  
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   500   0.0  
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   491   0.0  
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     496   0.0  
ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648...   489   0.0  
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ...   478   0.0  
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   509   0.0  
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   507   0.0  
ref|XP_010680400.1| PREDICTED: transposon Tf2-1 polyprotein isof...   449   0.0  
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]    486   0.0  
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   467   0.0  
ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isof...   471   0.0  
ref|XP_010541181.1| PREDICTED: uncharacterized protein LOC104814...   446   0.0  
gb|ABF94845.1| retrotransposon protein, putative, unclassified [...   465   0.0  
gb|AAO23078.1| polyprotein [Glycine max]                              464   0.0  
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja...   464   0.0  
gb|ABF93966.1| retrotransposon protein, putative, unclassified, ...   464   0.0  
gb|ABA97104.1| retrotransposon protein, putative, unclassified [...   459   0.0  
ref|XP_006365576.1| PREDICTED: uncharacterized protein LOC102595...   438   0.0  
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]                480   0.0  

>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  520 bits (1340), Expect(2) = 0.0
 Identities = 257/555 (46%), Positives = 358/555 (64%), Gaps = 8/555 (1%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            ++WRHY    Q +I T  QSLK++ DQK++  +Q K +++LL  DY I+YKKG ENK AD
Sbjct: 785  KRWRHYFLGTQLIIRTDQQSLKFMTDQKVAEGIQHKLMLRLLEFDYTIEYKKGKENKVAD 844

Query: 1666 AXXXXXXXXXXXXXXXXXXXLQDIQSSYEADTTAQYLITQLTVT-QSHGNYSYSHGILKF 1490
            A                    + + +SY+ D   + L+ QLT+   +   Y+ + G+L++
Sbjct: 845  ALSRRGNSVMAISIAVPSWI-EAVTNSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRY 903

Query: 1489 KSMIYIDSGNNLK----SSIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTTCDI 1322
            K  IY+     L+     S++ S+VGGHSG  ATY R K  F+WP MK +I   V  C +
Sbjct: 904  KGRIYVGKDPELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAV 963

Query: 1321 CQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSHFIS 1142
            CQ  K E+    GLL+PL IPD AW HIS+DFIEGL  S  K  I VVVDR TKY+H + 
Sbjct: 964  CQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVP 1023

Query: 1141 LGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTAYHP 962
            L HP++   VA+  + ++FKLHG P  IVSDR++IF S+ WQ LFKS+   L+ STAYHP
Sbjct: 1024 LSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHP 1083

Query: 961  QTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYGYDP 782
            QTDGQTER N  +E YLRCM +   K+WV WL LAEWW+NT +HT+LK+ PFQALYG+ P
Sbjct: 1084 QTDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFPP 1143

Query: 781  P---HLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAVG 611
            P    +  P P         ++L+E+ +ML+ L + L++AQ RMK +AD  R++R+  VG
Sbjct: 1144 PLINEVAIPGPEDNE---ARDFLEEKQVMLRRLKENLAQAQTRMKKYADLNRSERQLTVG 1200

Query: 610  DLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVSQ 431
            D+V+LK+QPYR T+  ++Q  KL++ ++GPF V+QR+G VAY+L+L  G  IHPVFH+SQ
Sbjct: 1201 DMVYLKMQPYRTTAFGLKQALKLTSIFYGPFRVMQRVGKVAYRLQLPEGVGIHPVFHISQ 1260

Query: 430  LKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDAT 251
            LK+  G  +  SP+LP+V    +   EP  V +TR   R+++++ Q L QW N  PEDA+
Sbjct: 1261 LKQHCGANSIPSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQWANLPPEDAS 1320

Query: 250  WEDAAHIYAQFPDFY 206
            WEDA+ I + FP+FY
Sbjct: 1321 WEDASFIKSTFPEFY 1335



 Score =  384 bits (986), Expect(2) = 0.0
 Identities = 184/319 (57%), Positives = 241/319 (75%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +I+PS SP+A+P +LVKKKDG+WR C+DYR+LN  T+K+K+ IP+IE+LL EL G+ VFS
Sbjct: 467  IIRPSTSPYASPAILVKKKDGSWRLCIDYRELNAQTIKNKYPIPVIEDLLDELFGAKVFS 526

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIR+   DI KT F T+ GHYE+ VM FGLTN PATFQ LMN +F  YLR+
Sbjct: 527  KLDLRSGYHQIRMNREDICKTAFNTYLGHYEYLVMPFGLTNAPATFQCLMNSIFAQYLRR 586

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            F+LVFFDDIL+YS + E H E+L ++L LLR+H LF KL+KC FA  Q+ YLG++I+  G
Sbjct: 587  FILVFFDDILIYSKNDEEHQEHLTIVLGLLRQHQLFAKLNKCVFAVSQVTYLGHVISGDG 646

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTD 2080
            V  DP+K++++V WP+PQ + QLR FLG+T YYR+FI+ YG I   L DML+K  F W D
Sbjct: 647  VATDPDKISTIVEWPKPQDLTQLRSFLGMTGYYRRFIRHYGVICRPLYDMLRKGGFDWKD 706

Query: 2079 DTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPK 1900
                AF  +K AMTTAPVLALPDFS+ F LETDA   G+G VLMQ  +P+A+FS+ LG +
Sbjct: 707  PQDEAFVKLKLAMTTAPVLALPDFSENFTLETDASGTGIGGVLMQRGRPLAYFSRTLGVR 766

Query: 1899 ALSLSTYEKEFSAIVMDAK 1843
            A ++STY++E  AI+   K
Sbjct: 767  AAAMSTYDREALAIIESLK 785


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  500 bits (1287), Expect(2) = 0.0
 Identities = 254/553 (45%), Positives = 343/553 (62%), Gaps = 5/553 (0%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            +KW+HY      +I T   SLKY+ +Q+++  +Q K L+KLL  DY I+YKKG ENKAAD
Sbjct: 314  KKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQENKAAD 373

Query: 1666 AXXXXXXXXXXXXXXXXXXXLQDIQSSYEADTTAQYLITQLTVT-QSHGNYSYSHGILKF 1490
            A                   + ++ +SY  D     L + L +  QSH  Y+   GIL++
Sbjct: 374  ALSRMQQLNALTTTVIVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGILRY 433

Query: 1489 KSMIYIDSGNNLKS----SIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTTCDI 1322
            K  I + +GN L+     S +DS++GGHSG  ATY R K  F+WP MK  + QFV  C +
Sbjct: 434  KDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPV 493

Query: 1321 CQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSHFIS 1142
            CQ +K E+++  GLLQPL +P+ AW HI++DF+EGL  S  K+ I V+VDR TKY+HFI 
Sbjct: 494  CQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIP 553

Query: 1141 LGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTAYHP 962
            L HPFTA  +  + L H +KLHGLP+ IVSDR++IF S  W+ +F+  G  L  S+AYHP
Sbjct: 554  LSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHP 613

Query: 961  QTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYGYDP 782
            QTDGQ+ER N  +E YLRCMT S  ++W   L  AEWW+NT +HTSL M P+QAL+G  P
Sbjct: 614  QTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKP 673

Query: 781  PHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAVGDLV 602
            P L   +   + +    N  + +  +L+ +   L KAQ RMK+FAD+ R +R   VGD+V
Sbjct: 674  PLLAELLLPGSLLEGERNKQEAKAALLETIKSHLVKAQARMKYFADQHRQERTLEVGDMV 733

Query: 601  FLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVSQLKK 422
            +LK+QPYR  S+ +  + KL ++Y+GPF VL+RIG+VAYKL L V  +IH VFHVSQLKK
Sbjct: 734  YLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVSQLKK 793

Query: 421  KLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDATWED 242
             LG +A     LPL+D   + +  P+AVLD R   R+   + Q    W N     ATWED
Sbjct: 794  HLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWED 853

Query: 241  AAHIYAQFPDFYP 203
            AA I   FP F P
Sbjct: 854  AAFITKVFPSFTP 866



 Score =  392 bits (1008), Expect(2) = 0.0
 Identities = 189/309 (61%), Positives = 237/309 (76%)
 Frame = -1

Query: 2781 SPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFSKIDLR* 2602
            SP+++P +LVKKKDGTWR CVDYR+LN  T+K+K+ IP+IE+LL EL G+ +FSKIDLR 
Sbjct: 2    SPYSSPAILVKKKDGTWRLCVDYRQLNASTIKNKYPIPVIEDLLDELQGAQIFSKIDLRS 61

Query: 2601 GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRKFVLVFF 2422
            GY+QIR++A D+HKT F TH GH+E+ VM FGLTN PATFQALMN++  PYLRKFVLVFF
Sbjct: 62   GYHQIRMHAADVHKTAFSTHLGHFEYLVMPFGLTNAPATFQALMNKILAPYLRKFVLVFF 121

Query: 2421 DDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASGVGADPE 2242
            DDIL+YS S   H ++L L+L LLR H LF K SKC F Q Q+EYLGYII++SGV  DP 
Sbjct: 122  DDILIYSKSATEHAQHLSLVLQLLRHHQLFAKPSKCVFGQDQVEYLGYIISSSGVATDPV 181

Query: 2241 KVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTDDTTHAF 2062
            KV ++ NWP P +I +LRGFLGL  YYR+FIK++G I   + D LKK+ F W +    AF
Sbjct: 182  KVQAVQNWPTPTSITELRGFLGLAGYYRRFIKNFGIICRPMFDALKKNNFHWQEVQQQAF 241

Query: 2061 SSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPKALSLST 1882
             +IK  +  APVLA+PDFS PFILE DA   G+GAVLMQ  +P+A+ SK +GPKA +LST
Sbjct: 242  DAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAIGPKAAALST 301

Query: 1881 YEKEFSAIV 1855
            Y+KE  AI+
Sbjct: 302  YDKEALAIL 310


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  491 bits (1264), Expect(2) = 0.0
 Identities = 252/554 (45%), Positives = 345/554 (62%), Gaps = 9/554 (1%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            +KWR YL    F I T   SLKYL++QK+ T LQQKW+ KLLG ++V++YK+G ENK AD
Sbjct: 910  KKWRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQKWITKLLGYEFVVEYKQGKENKVAD 969

Query: 1666 AXXXXXXXXXXXXXXXXXXXL----QDIQSSYEADTTAQYLITQLTV-TQSHGNYSYSHG 1502
            A                        + +++ Y  D   Q +I  L   + +  NY    G
Sbjct: 970  ALSRKMEDQKEGKLYAITAPANTWLEQLRTXYAIDPKLQQIIKNLEQGSLASQNYKQRDG 1029

Query: 1501 ILKFKSMIYIDSGNNLKSSI----YDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVT 1334
            +L +K  +YI +   L+  I    + S  GGHSG   T HRAK+ F+W  M+ ++ +F+ 
Sbjct: 1030 LLFYKGRLYIPASKELREQILYLLHSSPQGGHSGFHKTLHRAKSEFYWEGMRKEVRRFIK 1089

Query: 1333 TCDICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYS 1154
             CDICQ +K EN    GLLQPL IP   W  ISLDFIEGL  S   + I+VVVDRL+KY+
Sbjct: 1090 ECDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDFIEGLPNSESYSVIMVVVDRLSKYA 1149

Query: 1153 HFISLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLST 974
            HFI + HP+TA  +A+  L+++FKLHGLP+ IV+DR+  F S FW+ LFK  GTTLK S+
Sbjct: 1150 HFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDRDPTFTSTFWKELFKLQGTTLKFSS 1209

Query: 973  AYHPQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALY 794
            AYHPQTDGQTE  N  +EQYLRC +    K WV+WL LAEWW+NTN H S K+ PF+++Y
Sbjct: 1210 AYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLPLAEWWYNTNIHASTKLSPFESVY 1269

Query: 793  GYDPPHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAV 614
            GY PP L+   P +T +  VEN L+ RD ++++L   L  AQ RMK FAD K   R F +
Sbjct: 1270 GYPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRTNLQLAQDRMKKFADIKXTARSFNI 1329

Query: 613  GDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVS 434
            GDLV+L+LQPY+Q SV  R+N KLS +++GP+ VL++IGTVAY+L+L    +IHPVFHVS
Sbjct: 1330 GDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVS 1389

Query: 433  QLKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDA 254
             LK+KLG +  +   LP  D       EP  +L  R   +    + ++L +W     ++A
Sbjct: 1390 CLKEKLGERHQLVVTLPPXDKDGVIRXEPEEILHRRLKKKKNHAVTEVLVKWKGLGEDEA 1449

Query: 253  TWEDAAHIYAQFPD 212
            +W + + +  +FPD
Sbjct: 1450 SWVEYSTLVNEFPD 1463



 Score =  395 bits (1016), Expect(2) = 0.0
 Identities = 188/319 (58%), Positives = 243/319 (76%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +++P  SPF++P+LLV+K DG+WR CVDYR LN  T+K KF IP+++ELL EL+GS +FS
Sbjct: 592  IVRPGQSPFSSPVLLVRKHDGSWRLCVDYRALNKETIKVKFPIPIVDELLDELHGSTIFS 651

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIRV+  DI KT FRTH+GHYEF V+ FGLTN P TFQ+LMN++F+PYLRK
Sbjct: 652  KLDLRSGYHQIRVHPEDIPKTAFRTHEGHYEFLVIPFGLTNAPTTFQSLMNDIFKPYLRK 711

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            F+LVFF DILVYS SL  H+ +LQ +L +L++H LF K SKC F   ++EYLG++I+  G
Sbjct: 712  FILVFFYDILVYSKSLADHVHHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGHLISKDG 771

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTD 2080
            V ADP K+ +M+NWP P ++K LRGFLGLT YYRKFIK YG I   LT +LKK+ F WT+
Sbjct: 772  VQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAPLTALLKKNSFKWTE 831

Query: 2079 DTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPK 1900
                AF  +KH +T+ PVLALPDFS PF ++ DA   GVGAVLMQ  +P+A+ S+ +  K
Sbjct: 832  SAKRAFQDLKHDVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMSQAIHGK 891

Query: 1899 ALSLSTYEKEFSAIVMDAK 1843
            AL LSTYEKE  A+V+  K
Sbjct: 892  ALQLSTYEKELMALVLAVK 910


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  496 bits (1277), Expect(2) = 0.0
 Identities = 252/559 (45%), Positives = 348/559 (62%), Gaps = 11/559 (1%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            +KWRHY+   + +I T  QSLK++M Q+L   +Q K L+KL+  DY I+YK G EN  AD
Sbjct: 918  KKWRHYVLGSKLIIKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDYTIEYKSGKENLVAD 977

Query: 1666 AXXXXXXXXXXXXXXXXXXXL-----QDIQSSYEADTTAQYLITQL-TVTQSHGNYSYSH 1505
            A                   +      DIQ SYE D  A  +++ + T       Y    
Sbjct: 978  ALSRLPQKEAVADRCHPMTVVIPEWIVDIQRSYENDVQAHKILSLIGTAADPDREYKLEA 1037

Query: 1504 GILKFKSMIYIDSGNNLKSSI----YDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFV 1337
            G+LK+K  IY+    +++  +    + SS GGHSG+ AT+HR K  F+W  M+ ++ +F+
Sbjct: 1038 GLLKYKGRIYVGEATDIRRQLITTYHSSSFGGHSGMRATHHRIKMLFYWHGMRGEVERFI 1097

Query: 1336 TTCDICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKY 1157
              C  CQ  K E+  + GLL PL IPD AW HI++DFIEGL  S  K+ ILVVVDRLTKY
Sbjct: 1098 RECPTCQITKSEHVHIPGLLNPLEIPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKY 1157

Query: 1156 SHFISLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLS 977
            +HFI+L HP+    V +  ++++ KLHG+P  I++DR++IF S  +Q +FK++   L+ S
Sbjct: 1158 AHFIALAHPYDVEQVVEAFMNNIHKLHGMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFS 1217

Query: 976  TAYHPQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQAL 797
            TAYHPQ DGQTER N  +E YLR MT     +W  WLALAEWW+NT +HT+++M PF+A+
Sbjct: 1218 TAYHPQMDGQTERVNQCLESYLRNMTFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAM 1277

Query: 796  YGYDPPHL-VFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREF 620
            YGY PP +  F +P + S       ++E++ +L  L + L+ AQHRMK+FADK R +R  
Sbjct: 1278 YGYSPPQINEFSVPCNIS-EEARVTIEEKEAILNKLKNSLADAQHRMKYFADKNRTERNL 1336

Query: 619  AVGDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFH 440
             VGD+V+LKL+PYRQ++  +R + KL +K++GPF+VLQ+IG +AYKL+L    +IHPVFH
Sbjct: 1337 EVGDMVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFH 1396

Query: 439  VSQLKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPE 260
            VSQLKK LG  A     LP V    Q   EP+AVL  R   R    + Q L  W N +P 
Sbjct: 1397 VSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPA 1456

Query: 259  DATWEDAAHIYAQFPDFYP 203
            +ATWEDA+ I A FP F P
Sbjct: 1457 EATWEDASVIQAMFPSFNP 1475



 Score =  384 bits (986), Expect(2) = 0.0
 Identities = 182/314 (57%), Positives = 236/314 (75%)
 Frame = -1

Query: 2796 IQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFSK 2617
            IQ S SP+++P ++V+KKDG+WR CVDYR+LN  TVK+KF +P+IE+LL ELNG+ +FSK
Sbjct: 601  IQTSDSPYSSPAVMVRKKDGSWRMCVDYRQLNAQTVKNKFPMPIIEDLLDELNGARIFSK 660

Query: 2616 IDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRKF 2437
            +DLR GY+QIR+   D+HKT FRTH GHYE++VM FGLTNDPATFQ+LMN V  P+LR+F
Sbjct: 661  LDLRSGYHQIRMAEKDVHKTAFRTHLGHYEYQVMPFGLTNDPATFQSLMNHVLAPFLRRF 720

Query: 2436 VLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASGV 2257
            VLVFFDDIL+YS +   HLE+++L++  L+ + L  KL KCAF    + YLG++I+  GV
Sbjct: 721  VLVFFDDILIYSKTRAEHLEHVKLVMQALQDNHLVIKLKKCAFGLASVSYLGHVISQDGV 780

Query: 2256 GADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTDD 2077
              DP+KV  + NWP P+ +  +R FLG+T YYR+FI+ YG I   + DMLKK+ F W  D
Sbjct: 781  ATDPKKVGKIKNWPTPKDVTDVRKFLGMTGYYRRFIQGYGTICRPIHDMLKKNGFQWGAD 840

Query: 2076 TTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPKA 1897
             T AF ++KH + T+PVLALPDF Q F +E DAC  G+GAVLMQ  +PIAFFSK LGPKA
Sbjct: 841  QTTAFETLKHKLRTSPVLALPDFDQAFTIEADACGVGIGAVLMQGGRPIAFFSKALGPKA 900

Query: 1896 LSLSTYEKEFSAIV 1855
               S YEKE  AI+
Sbjct: 901  AGQSIYEKEAMAIL 914


>ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648418 [Zea mays]
          Length = 1853

 Score =  489 bits (1259), Expect(2) = 0.0
 Identities = 262/566 (46%), Positives = 347/566 (61%), Gaps = 8/566 (1%)
 Frame = -3

Query: 1840 WRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAADAX 1661
            WRHYL   +F I T H++L +L  Q L + LQ+K + KL+GL + + YK+G +NK ADA 
Sbjct: 1053 WRHYLQRSEFEIRTDHKALSFLGSQDLHSELQRKAMAKLMGLQFKVVYKQGKDNKVADAL 1112

Query: 1660 XXXXXXXXXXXXXXXXXXL-QDIQSSYEADTTAQYLITQLTV--TQSHGNYSYSHGILKF 1490
                                Q++ +SY  D  AQ L+ +L V     HG YS S G+++ 
Sbjct: 1113 SRVGAVMALTAVSEVQPLWIQEVTNSYVTDPAAQSLLARLCVHNPDEHG-YSLSQGVIRK 1171

Query: 1489 KSMIYIDSGNNLKS----SIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTTCDI 1322
              +I++   + L++    +++DS+ GGHSG+ ATYHR K  F W  MKSD+  FV  C I
Sbjct: 1172 GGLIWVGQNSALRTKLVAAVHDSAAGGHSGMHATYHRLKKLFVWKGMKSDVADFVQQCQI 1231

Query: 1321 CQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSHFIS 1142
            CQ  KGE     GLL PL IP  AWQ I++DFIE L  S   + ILVVVDR TKY+HFI+
Sbjct: 1232 CQQAKGERVHPAGLLHPLPIPQGAWQDITMDFIEKLPQSGGCDTILVVVDRFTKYAHFIA 1291

Query: 1141 LGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTAYHP 962
            L HPFTA  VA+ +L  V +LHGLP  IVSDR+KIF S FW  LFK LGT L LSTAYHP
Sbjct: 1292 LKHPFTASQVAQVILDQVVRLHGLPKSIVSDRDKIFTSAFWTQLFKILGTKLNLSTAYHP 1351

Query: 961  QTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYGYDP 782
            QTDGQ+ER N  +E YLRC   +   +W  WL+LAE+W+NT+YHTSL   PF+ LYGYDP
Sbjct: 1352 QTDGQSERVNQCVEMYLRCAVHAQPTKWKTWLSLAEFWYNTSYHTSLACSPFKVLYGYDP 1411

Query: 781  PHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAVGDLV 602
            P    P   S + A V   L ER     +L ++L+ AQ+RMK  AD+ R DR+F VGD+V
Sbjct: 1412 PFAAAPSVPSDTAADVAQVLVERAQFTAMLREQLAAAQNRMKLRADRLRTDRQFQVGDMV 1471

Query: 601  FLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVSQLKK 422
             LKLQPY Q SV  R   KL+ K+FGP+++++R+G VAY+L+L    ++HPVFHVSQLK 
Sbjct: 1472 LLKLQPYAQHSVVSRPCPKLAFKFFGPYKIVERVGAVAYRLELPASAQVHPVFHVSQLKP 1531

Query: 421  KLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDA-TWE 245
             +     V   LP         V+P+ +LD R   +    + Q+L +W +  P+DA TWE
Sbjct: 1532 FIPDYTPVFSNLPAYSDLSSRNVQPLEILDRRLVKKGNRAVPQVLIRW-SLLPDDATTWE 1590

Query: 244  DAAHIYAQFPDFYP*GQGSLNGRGNV 167
            D   +  ++P+    GQ SL G  NV
Sbjct: 1591 DYNVLRQRYPNAIAWGQASLEGGANV 1616



 Score =  389 bits (1000), Expect(2) = 0.0
 Identities = 184/316 (58%), Positives = 239/316 (75%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +I PS SPFA+P+LLV+KKDGTWRFCVDYRKLND+T+K++F +P++EE+L EL G+ +FS
Sbjct: 733  LITPSVSPFASPVLLVQKKDGTWRFCVDYRKLNDMTIKNRFPMPVVEEILDELAGTEIFS 792

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
             +D+  GY+QIR+   +  KT F+THQGHY+FRVM FGLTN PATFQ  MN V  P+LRK
Sbjct: 793  SLDMTSGYHQIRMGVSEEFKTAFKTHQGHYQFRVMPFGLTNAPATFQCAMNLVLAPFLRK 852

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            FV+VF DDILVYSP+ ++HLE+L+L+ + LR H  + K  KC F Q +L YLG+II+ +G
Sbjct: 853  FVMVFIDDILVYSPNWQSHLEHLRLVFTALRHHKFYLKERKCVFGQKELSYLGHIISGNG 912

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTD 2080
            V  DP+K  +M+ WP+P  +  LRGFLGLT YYR+F++ YG I   LT +L+K  F WT 
Sbjct: 913  VATDPKKTDAMLKWPKPLNVTDLRGFLGLTGYYRRFVQGYGAIARPLTRLLQKGAFQWTS 972

Query: 2079 DTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPK 1900
            +   AF  +K AM + PVLALPDF+ PF++ETDAC  GVGAVLMQ  +PIAF SK LG K
Sbjct: 973  EAEMAFQRLKQAMVSTPVLALPDFNIPFVVETDACDDGVGAVLMQRGRPIAFLSKALGIK 1032

Query: 1899 ALSLSTYEKEFSAIVM 1852
            +  LS YEKEF A++M
Sbjct: 1033 SQKLSIYEKEFIALIM 1048


>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1548

 Score =  478 bits (1229), Expect(2) = 0.0
 Identities = 265/571 (46%), Positives = 344/571 (60%), Gaps = 16/571 (2%)
 Frame = -3

Query: 1843 KWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAADA 1664
            KWR YL    FVI T HQSL +L DQ L + LQ+K + KL+GL Y  +YK+G ENK+ADA
Sbjct: 970  KWRPYLLRGPFVIRTDHQSLCHLDDQLLGSELQRKAMTKLIGLQYKFQYKRGAENKSADA 1029

Query: 1663 XXXXXXXXXXXXXXXXXXXL-QDIQSSYEADTTAQYLITQLTVTQSHGN-YSYSHGILKF 1490
                                 Q++ +SY  D  AQ L+T+L +   + + +S  HG++K 
Sbjct: 1030 LSRVGHFFSLQAISIAQPVWVQEVVNSYVVDNQAQSLLTELAIMSPNASGFSLVHGLIKK 1089

Query: 1489 KSMIYIDSGNNLK----SSIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTTCDI 1322
            K  I++ + + L     SS +DS++GGHSG+ ATYHR K  F W  +K  + +F+  C +
Sbjct: 1090 KGRIWLGANSALHTKIISSFHDSAIGGHSGVMATYHRVKKLFVWKGLKHSVEEFIQQCVV 1149

Query: 1321 CQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSHFIS 1142
            CQ  K E+    GLLQPL IP  AWQ IS+DFIEGL +S   + ILVVVDR TKY+HF+ 
Sbjct: 1150 CQKAKHEHCSSPGLLQPLPIPTGAWQDISMDFIEGLPLSKGSDVILVVVDRFTKYAHFLP 1209

Query: 1141 LGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTAYHP 962
            L HPFTA+ VA   LS V  L+G+P  IVSDR+KIF S FWQ LFK     L L+TAYHP
Sbjct: 1210 LKHPFTAVQVADNYLSKVASLYGMPKSIVSDRDKIFTSHFWQHLFKRFAIPLNLTTAYHP 1269

Query: 961  QTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYGYDP 782
            Q+DGQTER N  +E YLRC   S   +W  WL LA++W+NT++H++LK  P +ALYG DP
Sbjct: 1270 QSDGQTERVNQCLEMYLRCAVASAPTKWSSWLPLAQYWYNTSFHSALKCSPHKALYGTDP 1329

Query: 781  PHLVFPIP-------TSTSV---ATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRN 632
             + + P P       TS  +   + V   L+ER+L   +L   L++ Q+RMK FAD KR 
Sbjct: 1330 TYGLLPAPLTDDAEQTSDDIDDSSGVSALLKERELFSTMLQHHLARDQNRMKQFADAKRT 1389

Query: 631  DREFAVGDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIH 452
             R F VGDLV LKLQPY Q SV  R   KL+ KYFGPFE+L  +G+VAY+LKL     IH
Sbjct: 1390 ARSFQVGDLVLLKLQPYAQRSVIARPFPKLAFKYFGPFEILAVVGSVAYRLKLPADSLIH 1449

Query: 451  PVFHVSQLKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCN 272
            PVFHVSQLK  +     V  QLP         + P AVL+ R   +  + I Q+L QW +
Sbjct: 1450 PVFHVSQLKSFVPDTKPVFAQLPTAAQLDIADLIPSAVLERRLVKKGNAAIVQVLVQWGS 1509

Query: 271  SAPEDATWEDAAHIYAQFPDFYP*GQGSLNG 179
              P  ATWED   +  +FPD    GQ  + G
Sbjct: 1510 LPPALATWEDYDVVRTRFPDAVAWGQAPIGG 1540



 Score =  397 bits (1021), Expect(2) = 0.0
 Identities = 194/317 (61%), Positives = 244/317 (76%), Gaps = 1/317 (0%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +I PS SPFA+P+LLVKKKD +WRFCVDYR+LND+T+K+KF +P+++ELL EL G+  FS
Sbjct: 650  LISPSCSPFASPVLLVKKKDNSWRFCVDYRRLNDLTIKNKFPLPIVDELLDELAGTQFFS 709

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIR+   D  KT F+TH GH++FRVM FGLTN PATFQ LMN +F PYLRK
Sbjct: 710  KLDLRSGYHQIRMQESDEFKTAFKTHHGHFQFRVMPFGLTNAPATFQCLMNSIFAPYLRK 769

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            FVLVF DDILVYS S   HL++L+ +L LL++H L  KLSKC+FA PQLEYLG+II+A+G
Sbjct: 770  FVLVFMDDILVYSKSWTDHLKHLRCVLQLLQQHQLCAKLSKCSFAAPQLEYLGHIISAAG 829

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDY-FSWT 2083
            V  D EK   M+ WP P  + +LRGFLGLT YYRKF+K+YG +   LT +LKK+  F WT
Sbjct: 830  VATDAEKTKVMLQWPVPTNLTELRGFLGLTGYYRKFVKNYGILAKPLTVLLKKNVKFVWT 889

Query: 2082 DDTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGP 1903
            + T  AF S+K AM++ PVL LP+F++PF +ETDACS G+GAVL Q   P+AF+SK LG 
Sbjct: 890  EHTQKAFDSLKLAMSSTPVLVLPNFAKPFTIETDACSTGIGAVLSQEGHPVAFYSKALGI 949

Query: 1902 KALSLSTYEKEFSAIVM 1852
                LS YEKEF AI+M
Sbjct: 950  NNQKLSIYEKEFLAIMM 966


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  509 bits (1310), Expect(2) = 0.0
 Identities = 258/557 (46%), Positives = 350/557 (62%), Gaps = 9/557 (1%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            +KWRHY+     +I T  QSLK++M Q+L   +Q K L+KL+  DYVI+YK G EN  AD
Sbjct: 1056 KKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLKLMEFDYVIEYKSGKENLVAD 1115

Query: 1666 AXXXXXXXXXXXXXXXXXXXL---QDIQSSYEADTTAQYLITQL-TVTQSHGNYSYSHGI 1499
            A                       QDI+ SYE D  A  +++ + T      +Y    G+
Sbjct: 1116 ALSRSPNLKEEQCLPITVVVPEWVQDIKRSYEEDIFAHKILSLIETDGDPERHYKLESGL 1175

Query: 1498 LKFKSMIYIDSGNNLKSSIYD----SSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTT 1331
            LK+K  IY+     ++  + +    S  GGHSGI ATYHR K  F+WP +K  +  ++  
Sbjct: 1176 LKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQVEHYIRE 1235

Query: 1330 CDICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSH 1151
            C  CQ  K E+  + GLL PL +PD AW HI++DFIEGL  S  K+ ILVVVDRLTKY+H
Sbjct: 1236 CPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAH 1295

Query: 1150 FISLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTA 971
            F++L HP+T   V +  + ++ KLHG+P  IV+DR+++F S F+Q +FK+    L+ STA
Sbjct: 1296 FLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTA 1355

Query: 970  YHPQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYG 791
            +HPQTDGQTER N  +E YLR MT    ++W  WLALAEWW+NT YHTS++M PFQALYG
Sbjct: 1356 HHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYG 1415

Query: 790  YDPPHLV-FPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAV 614
            Y PP +  F IP + S       L+++ L+LQ L   + +AQ R+KF+ADK R++R   +
Sbjct: 1416 YPPPQITEFAIPCNMS-EEARVTLEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLEL 1474

Query: 613  GDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVS 434
            GD+V+LKLQPYRQ ++ +R + KL +KY+GPF+V++++G VAYKL+L  G  IHPVFHVS
Sbjct: 1475 GDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVS 1534

Query: 433  QLKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDA 254
            QLKK LG +A   P LP +    Q   EP AVL  R   R    + Q L  W N  P +A
Sbjct: 1535 QLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEA 1594

Query: 253  TWEDAAHIYAQFPDFYP 203
            TWEDA++I A FP+F P
Sbjct: 1595 TWEDASYIQAAFPNFQP 1611



 Score =  364 bits (935), Expect(2) = 0.0
 Identities = 176/314 (56%), Positives = 232/314 (73%)
 Frame = -1

Query: 2796 IQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFSK 2617
            I+ S SP+ +P ++V+KKDG+WR CVDYR+LN  T+K+KF +P+IE+LL EL+G+ VFSK
Sbjct: 739  IRISDSPYVSPAVMVRKKDGSWRLCVDYRQLNAQTIKNKFPMPIIEDLLDELHGAKVFSK 798

Query: 2616 IDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRKF 2437
            +DLR GY+QIR+   DI KT FRTH GHYE+ VM FGLTN PATFQALMN+V  P+LRKF
Sbjct: 799  LDLRSGYHQIRMAEGDIPKTAFRTHLGHYEYNVMPFGLTNAPATFQALMNQVLAPFLRKF 858

Query: 2436 VLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASGV 2257
            VLVFF DIL+YS +   HLE+++L++  L  + L  +L KC F   ++ YLG+II++ GV
Sbjct: 859  VLVFFADILIYSKTQSEHLEHIKLVMQALSANQLVVRLKKCEFGLDRVSYLGHIISSEGV 918

Query: 2256 GADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTDD 2077
              DP+K++ + N   P+ + ++R FLG+  YYR+FIK YG I   L D+LKKD F W D 
Sbjct: 919  STDPKKISDIKNRKPPKNVTEVREFLGMAGYYRRFIKGYGVICRPLHDLLKKDGFKWGDT 978

Query: 2076 TTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPKA 1897
               AF  +K  M  +PVLALPDFSQPF++ETDAC  G+GAVLMQ  +P+A+FSK LGPKA
Sbjct: 979  QQEAFELLKEKMCNSPVLALPDFSQPFVIETDACGIGIGAVLMQKGRPLAYFSKALGPKA 1038

Query: 1896 LSLSTYEKEFSAIV 1855
             + S YEKE  AI+
Sbjct: 1039 AAQSVYEKEAIAIL 1052


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  507 bits (1305), Expect(2) = 0.0
 Identities = 254/560 (45%), Positives = 346/560 (61%), Gaps = 12/560 (2%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            ++WRHY+   + VI T  QSLKY+M+Q+L   +Q K L+KL+  +Y I+YK G EN  AD
Sbjct: 397  KRWRHYVLGGELVIKTDQQSLKYMMNQRLVEGIQHKLLLKLMEYNYTIEYKAGRENLVAD 456

Query: 1666 AXXXXXXXXXXXXXXXXXXXLQ------DIQSSYEADTTAQYLITQL-TVTQSHGNYSYS 1508
            A                   +       DI+ SYE D  A  L++ + T     G Y + 
Sbjct: 457  ALSRSPKNKEEVTELCAAIAVVVPEWILDIKRSYEEDVQAHKLLSLIGTAGDPEGEYKFE 516

Query: 1507 HGILKFKSMIYIDSGNNLKSSI----YDSSVGGHSGITATYHRAKASFFWPNMKSDIIQF 1340
             GI+K+K  IY+     ++  +    + S+ GGH GI ATY R K  F+WP +K  +   
Sbjct: 517  AGIMKYKGRIYVGETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKLFYWPGLKKGVENH 576

Query: 1339 VTTCDICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTK 1160
            +  C +CQ  K E+  + GLL PL +PD AW HIS+DF+EGL  S  K+ ILVVVDRLTK
Sbjct: 577  IRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVVDRLTK 636

Query: 1159 YSHFISLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKL 980
            Y+HFI+L HP+T   V +  + ++ KLHG+P  IV+DR+++F S F+Q +FKS    L+ 
Sbjct: 637  YAHFIALSHPYTVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRF 696

Query: 979  STAYHPQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQA 800
            STAYHPQTDGQTER N  +E YLRCMT    + W  W+ALAEWW+NT YHT+++M PF+A
Sbjct: 697  STAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKA 756

Query: 799  LYGYDPPHL-VFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDRE 623
            LYGY PP +  F +P   S       L+E++ ++Q L   +  AQ RMK++AD+ R +R+
Sbjct: 757  LYGYSPPQISEFSVPCDVS-QEARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERK 815

Query: 622  FAVGDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVF 443
              VGD+V+LKLQPYRQ +  +R + KL  KY+GPF+VL+++G VAY+L+L     IHPVF
Sbjct: 816  LEVGDMVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVF 875

Query: 442  HVSQLKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAP 263
            HVSQLKK LG  A   P LP V    Q   EP+AVL  R   R+   + Q L  W N  P
Sbjct: 876  HVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTP 935

Query: 262  EDATWEDAAHIYAQFPDFYP 203
             +ATWEDA++I   FP+F P
Sbjct: 936  AEATWEDASYIQKVFPNFQP 955



 Score =  359 bits (921), Expect(2) = 0.0
 Identities = 170/314 (54%), Positives = 236/314 (75%)
 Frame = -1

Query: 2796 IQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFSK 2617
            I+ S SP+A P ++V+K+DG+WR CVDYR+LN  TVK+KF +P+IE+LL EL+G+ +FSK
Sbjct: 80   IRFSDSPYACPAIMVRKRDGSWRMCVDYRQLNAQTVKNKFPMPIIEDLLDELHGARIFSK 139

Query: 2616 IDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRKF 2437
            +DLR GY+QIR+   DI KT F+TH GHYE++VM FGLTN PATFQ+LMN+   P+LRKF
Sbjct: 140  LDLRSGYHQIRMAEEDIPKTAFKTHMGHYEYQVMPFGLTNAPATFQSLMNQALAPFLRKF 199

Query: 2436 VLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASGV 2257
            VLVFF DIL+YS + E H+++++ +L +L K+ L  +L KCAF    + YLG++I++ GV
Sbjct: 200  VLVFFYDILIYSKTREEHIKHIKAVLQVLEKNQLVVRLKKCAFGLSSVAYLGHVISSDGV 259

Query: 2256 GADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTDD 2077
              DP K++ ++N  +P+ + ++R FLG+T YYR+FIK YG I   L DMLKK  F+W   
Sbjct: 260  ATDPSKISDIMNRKEPKNVTEVREFLGMTGYYRRFIKGYGLICRPLHDMLKKGGFNWGLA 319

Query: 2076 TTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPKA 1897
             + AF+ +K  + T+PVLALP+F QPF++E DAC  G+GAVLMQ  +PIA++SK LGPKA
Sbjct: 320  QSEAFTELKGKLCTSPVLALPNFEQPFVIEADACEVGIGAVLMQAGRPIAYYSKALGPKA 379

Query: 1896 LSLSTYEKEFSAIV 1855
             + S YEKE  AI+
Sbjct: 380  AAQSIYEKEAMAIL 393


>ref|XP_010680400.1| PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Beta vulgaris
            subsp. vulgaris]
          Length = 1574

 Score =  449 bits (1154), Expect(2) = 0.0
 Identities = 240/572 (41%), Positives = 342/572 (59%), Gaps = 10/572 (1%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            QKWRHYL  ++FVI T  +SLK++M+Q+   A  Q+W+ KL+G ++ I YK G+ N+ AD
Sbjct: 985  QKWRHYLLGRRFVIRTDQKSLKFIMEQREVGAEYQRWVSKLMGFEFEIHYKPGIANRVAD 1044

Query: 1666 AXXXXXXXXXXXXXXXXXXXL--QDIQSSYEADTTAQYLITQLTVTQSHG----NYSYSH 1505
            A                      + +Q+  +AD   Q ++ +L   Q  G     +S  +
Sbjct: 1045 ALSRQNPAQTELKALLSSSGPSLEAVQNQLKADPYIQQIMAEL---QGDGPPMEGFSVEN 1101

Query: 1504 GILKFKSMIYIDSGNNLKSSI----YDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFV 1337
            G++ +K  I +   + L   +    +DS  GGHSG   TY R  + ++W  M+ ++ Q+V
Sbjct: 1102 GLVMYKGRIVLPPKSPLTHELLKFYHDSPNGGHSGDLKTYLRMASEWYWVGMRKNVAQYV 1161

Query: 1336 TTCDICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKY 1157
              C ICQ +K       GLLQPL  P+  W+ I++DF+EGL  S   + ILVVVDR TK+
Sbjct: 1162 KDCQICQQNKTSTQNPAGLLQPLPPPNQVWEDITMDFVEGLPPSRGVDTILVVVDRFTKF 1221

Query: 1156 SHFISLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLS 977
            +HF+ L HPFTA TVA   +  + +LHG P+ I+SDR+++F+S FW+ LF+  GT LK S
Sbjct: 1222 AHFLGLKHPFTAATVAGTFIKEIVRLHGFPASIISDRDRVFMSLFWKELFRLQGTKLKRS 1281

Query: 976  TAYHPQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQAL 797
            TAYHPQTDGQ+E  N ++E YLRC      ++W  WL   E+W+NT+ H S KM PF+AL
Sbjct: 1282 TAYHPQTDGQSENVNKALETYLRCFVNGQPRKWAGWLPWVEFWYNTSPHVSTKMTPFKAL 1341

Query: 796  YGYDPPHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFA 617
            YG DPP LV      T V ++++YLQERD +L  L   L +AQ +MKF+ADK+R D    
Sbjct: 1342 YGRDPPPLVRTGHNQTPVDSLDSYLQERDAVLDDLRVNLLRAQQKMKFWADKRRRDILLE 1401

Query: 616  VGDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHV 437
            VG  V+LKLQPYRQ S+A R   KL+A+Y+GP++VL+RIG VAY+L L    +IHPVFHV
Sbjct: 1402 VGSFVYLKLQPYRQKSLARRPYEKLAARYYGPYQVLERIGAVAYRLDLPATSKIHPVFHV 1461

Query: 436  SQLKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPED 257
            SQLK   G     S     +    + +VEP A+LD R     +    ++L +W +    +
Sbjct: 1462 SQLKPAAGNIHQPSQLPEQLTQDLELIVEPEALLDVRYGAPGHKKPLEVLIKWKHLPETE 1521

Query: 256  ATWEDAAHIYAQFPDFYP*GQGSLNGRGNVMI 161
            ATWED   +  +FP F+   + +L   GNVM+
Sbjct: 1522 ATWEDLTAMVQRFPTFHLEDKVNLWAAGNVMM 1553



 Score =  410 bits (1055), Expect(2) = 0.0
 Identities = 198/316 (62%), Positives = 247/316 (78%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +IQPS SPF++P+LLVKKKDG+WRFCVDYR LN  TV DK+ IP+I+ELL EL GS+VFS
Sbjct: 667  IIQPSTSPFSSPVLLVKKKDGSWRFCVDYRALNKETVPDKYPIPVIDELLDELYGSVVFS 726

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DL+ GY+QIRV   DIHKT FRTH+GHYEF VM FGLTN PATFQ+LMNEVF+P+LRK
Sbjct: 727  KLDLKSGYHQIRVRKEDIHKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNEVFRPFLRK 786

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            FVLVFFDDILVYSP  E H  +L+ +L +L ++SL+  L KC F + Q+ YLG++I+A G
Sbjct: 787  FVLVFFDDILVYSPDEETHFHHLEQVLHILAENSLYANLEKCEFGRQQVAYLGHVISAQG 846

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTD 2080
            V AD +K+ +MV WP P+TI++LRGFLGLT YYRKFI +Y  +   LTD L+KD ++WT 
Sbjct: 847  VAADMDKIKAMVEWPLPKTIRELRGFLGLTGYYRKFIANYAKVASPLTDQLRKDSYAWTP 906

Query: 2079 DTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPK 1900
              T AF ++K AM  APVLA+PDFSQ F++E DA   G+GAVLMQ ++PIAF+S  LGP+
Sbjct: 907  AATQAFEALKKAMVAAPVLAMPDFSQQFVIEADASGFGLGAVLMQNNRPIAFYSHILGPR 966

Query: 1899 ALSLSTYEKEFSAIVM 1852
                S YEKE  AIVM
Sbjct: 967  GRLKSIYEKELMAIVM 982


>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
          Length = 933

 Score =  486 bits (1252), Expect(2) = 0.0
 Identities = 262/568 (46%), Positives = 355/568 (62%), Gaps = 10/568 (1%)
 Frame = -3

Query: 1840 WRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAADAX 1661
            WR YL  Q+F+I T H SL +L +Q+L T  QQK   KL GL + I Y+KG  N AADA 
Sbjct: 327  WRPYLQFQEFLIITDHHSLMHLTEQRLHTPWQQKAFTKLSGLQFQIVYRKGKHNAAADAL 386

Query: 1660 XXXXXXXXXXXXXXXXXXL---QDIQSSYEADTTAQYLITQLTVT-QSHGNYSYSHGILK 1493
                                  QDI   Y+ D  A  L+T L V   S+ +YS S G++K
Sbjct: 387  SRHVPEETSEFLGISTCSPVWLQDILHGYDQDPLALSLLTGLAVNPSSYPHYSLSKGLIK 446

Query: 1492 FKSMIYIDSGNNLK----SSIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTTCD 1325
             K  +++ + +N++    S+++DS +GGHSG   TY R K+ F WP+MK  + + + +C 
Sbjct: 447  HKGKVWVGNNSNIQQQIISALHDSPLGGHSGFPVTYKRIKSLFSWPHMKLTVQKQLASCA 506

Query: 1324 ICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSHFI 1145
            +C   K + S   GLLQPL +PD AWQ IS+DFIEGL  SY ++ ILVVVD+ +KY+HF+
Sbjct: 507  VCLQAKPDRSKYPGLLQPLPVPDGAWQIISMDFIEGLPKSYHQDCILVVVDKFSKYAHFM 566

Query: 1144 SLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTAYH 965
             L HPF+A+ VAK  + +V+KLHGLP  I+SDR+KIF S  W+ LF   GT L LS+AYH
Sbjct: 567  PLSHPFSALDVAKVFMLNVYKLHGLPQIIISDRDKIFTSALWEQLFLRSGTKLHLSSAYH 626

Query: 964  PQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYGYD 785
            PQ+DGQTER N  +E +LRC   +   +W  WL LAE+W+N++YH++L   PF+ LYGY 
Sbjct: 627  PQSDGQTERVNQCLEIFLRCFVHATPAKWSLWLHLAEFWYNSSYHSALNKTPFEVLYGYP 686

Query: 784  PPHLVFPIPTSTSV-ATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAVGD 608
            P H  F I     V + ++++L ER LM QLL   L++AQ  MK  ADKKR+ R F VGD
Sbjct: 687  PSH--FGIRADACVISDLDSWLSERHLMTQLLRQHLNRAQQVMKTQADKKRSFRSFQVGD 744

Query: 607  LVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVSQL 428
             VFLKLQPY Q+SVA R N KLS +YFGP+++L ++G+VAYKL+L     +HPVFHVSQL
Sbjct: 745  WVFLKLQPYVQSSVAKRANHKLSFRYFGPYQILSKVGSVAYKLQLPADSMVHPVFHVSQL 804

Query: 427  KKKLGLQAAVSPQLP-LVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDAT 251
            K     + ++  QLP + DH    +  P+ +LDTR   +   +++QIL  W N    +AT
Sbjct: 805  KGTQNFKHSIQSQLPNITDH----IQYPVQILDTRIQKKGNKVVRQILVCWSNLPAVEAT 860

Query: 250  WEDAAHIYAQFPDFYP*GQGSLNGRGNV 167
            WED   +  +FP   P GQ SL G G V
Sbjct: 861  WEDEEELKQRFPSALPWGQVSLQGVGFV 888



 Score =  372 bits (954), Expect(2) = 0.0
 Identities = 181/317 (57%), Positives = 233/317 (73%), Gaps = 1/317 (0%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +IQ S SPF++P LLVKKKDG+WR C+DYR+LN IT K  + +P+I+ELL EL G+ +FS
Sbjct: 6    IIQHSSSPFSSPALLVKKKDGSWRVCIDYRQLNAITKKGTYPMPIIDELLDELAGAKIFS 65

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIR+   +  KT F+TH GHYE++VMSFGLT  PATFQ  MN+  +P LRK
Sbjct: 66   KLDLRAGYHQIRMAEGEEFKTAFQTHSGHYEYKVMSFGLTGAPATFQGAMNDTLRPLLRK 125

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
              LVFFDDIL+YSP + +HL++L+ +L LL  H    KLSKC FAQ Q+ YLG+II+  G
Sbjct: 126  CALVFFDDILIYSPDMNSHLDHLKQVLQLLDTHQWKVKLSKCDFAQTQISYLGHIISGQG 185

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDY-FSWT 2083
            V  DP K+ S+V+W  P T+K+LRGFLGL  YYRKF+KD+G +   LT +LKKD  F W+
Sbjct: 186  VSTDPSKIQSIVDWAVPTTLKKLRGFLGLAGYYRKFVKDFGTLSKPLTQLLKKDAPFVWS 245

Query: 2082 DDTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGP 1903
             +   AF ++KHA+T+ PVLALP+F Q F +ETDA   G+GAVL Q   P+AF SK LGP
Sbjct: 246  AEVNQAFQALKHALTSTPVLALPNFQQGFTIETDASDIGIGAVLSQNQHPVAFVSKALGP 305

Query: 1902 KALSLSTYEKEFSAIVM 1852
            +   LSTYEKE  AI+M
Sbjct: 306  RTQGLSTYEKECLAIMM 322


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  467 bits (1202), Expect(2) = 0.0
 Identities = 253/569 (44%), Positives = 340/569 (59%), Gaps = 9/569 (1%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            + WR YL   +F+I T H SL +L +Q+L T  QQK   KLLGL Y I Y+KG+ N AAD
Sbjct: 986  EHWRPYLQQGEFIILTDHHSLMHLTEQRLHTPWQQKAFTKLLGLQYKICYRKGVSNAAAD 1045

Query: 1666 AXXXXXXXXXXXXXXXXXXXL--QDIQSSYEADTTAQYLITQLTVT-QSHGNYSYSHGIL 1496
            A                      Q++   Y+ D  ++ L+ +L ++  S  +Y    GIL
Sbjct: 1046 ALSRRESPISEVAAISECIPSWMQELMQGYQLDGQSKQLLAELAISPNSRKDYQLCQGIL 1105

Query: 1495 KFKSMIYIDSGNN------LKSSIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVT 1334
            K+K  I++  GNN      L + ++ + +GGHSG   TY + K+ F WP MK  I + + 
Sbjct: 1106 KYKGKIWV--GNNTALQHKLVNELHATPLGGHSGFPVTYRKVKSLFAWPGMKKLIKEQLQ 1163

Query: 1333 TCDICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYS 1154
            +C +C   K + +   GLLQPL +P  AWQ ISLDFIEGL  S   N ILVVVD+ +KYS
Sbjct: 1164 SCQVCLQAKPDRARYPGLLQPLPVPAGAWQTISLDFIEGLPRSSHYNCILVVVDKFSKYS 1223

Query: 1153 HFISLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLST 974
            HFI L HPF A  VA+E + +++KLHGLP  I+SDR+KIF SQFW  LF   GT L +S+
Sbjct: 1224 HFIPLSHPFNAGGVAQEFMKNIYKLHGLPRAIISDRDKIFTSQFWDQLFSKFGTDLHMSS 1283

Query: 973  AYHPQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALY 794
            AYHPQ+DGQTER N  +E YLRC   +   +W  WL LAE+W+NT++H++L   PF+ LY
Sbjct: 1284 AYHPQSDGQTERVNQCLEIYLRCFVHAAPHKWSSWLYLAEFWYNTSFHSTLNKTPFEVLY 1343

Query: 793  GYDPPHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAV 614
            GY P H    +     +A +  +  ER  M QLL   L++AQ +MK  ADKKR+ R+FAV
Sbjct: 1344 GYTPSHFGIGL-DDCQIADLHEWHTERKFMQQLLQQHLNRAQQQMKHQADKKRSFRQFAV 1402

Query: 613  GDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVS 434
            GD V+LKLQPY QT VA R   KL+ +Y+GPF+V+ R+GTVAY ++L     IHPVFHVS
Sbjct: 1403 GDWVYLKLQPYVQTFVAQRACHKLAFRYYGPFQVMSRVGTVAYHIQLPATSSIHPVFHVS 1462

Query: 433  QLKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDA 254
            QLK  +G    V  +LP    A Q    P   LD R   +    + Q+L  W +S+P ++
Sbjct: 1463 QLKAAVGFSKKVQDELPTSLGALQV---PFQFLDKRLVKKGNRSVLQLLTHWYHSSPSES 1519

Query: 253  TWEDAAHIYAQFPDFYP*GQGSLNGRGNV 167
            TWED   ++A+FP     GQ S    G V
Sbjct: 1520 TWEDMEDLFARFPRALAWGQASFQDWGIV 1548



 Score =  389 bits (1000), Expect(2) = 0.0
 Identities = 189/317 (59%), Positives = 238/317 (75%), Gaps = 1/317 (0%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            VIQPS SPF++P LLVKKKDGTWR C+DYR+LND+TVK K+ +P+I+ELL EL GS  FS
Sbjct: 667  VIQPSSSPFSSPALLVKKKDGTWRLCIDYRQLNDVTVKSKYPVPVIDELLDELAGSKWFS 726

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIR+   D +KT F+TH GHYE++VMSFGLT  PATF + MNE   P LRK
Sbjct: 727  KLDLRAGYHQIRMAEGDEYKTAFQTHSGHYEYKVMSFGLTGAPATFLSAMNETLSPVLRK 786

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            F LVFFDDIL+YSP+LE HL++++ +L LL  H    KLSKC+FAQ ++ YLG++I A+G
Sbjct: 787  FALVFFDDILIYSPTLELHLQHVRTVLQLLSAHQWKVKLSKCSFAQQEISYLGHVIGAAG 846

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDY-FSWT 2083
            V  DP K+  +V+WPQP TIK+LRGFLGL  YYRKF++ +G I   LT +LKK   F WT
Sbjct: 847  VATDPAKIQDVVSWPQPTTIKKLRGFLGLAGYYRKFVRHFGLISKPLTQLLKKGIPFKWT 906

Query: 2082 DDTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGP 1903
             +   AF  +K A+  APVLALPDFS+ F +ETDA   G+GAVL Q   PIA+ S+ LGP
Sbjct: 907  PEIESAFQQLKQALVAAPVLALPDFSKHFTIETDASDVGIGAVLSQEKHPIAYLSRALGP 966

Query: 1902 KALSLSTYEKEFSAIVM 1852
            K   LSTYEKE+ AI++
Sbjct: 967  KTRGLSTYEKEYMAIIL 983


>ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
            gi|670423336|ref|XP_008652482.1| PREDICTED: transposon
            Tf2-1 polyprotein isoform X1 [Zea mays]
          Length = 1567

 Score =  471 bits (1211), Expect(2) = 0.0
 Identities = 253/566 (44%), Positives = 343/566 (60%), Gaps = 6/566 (1%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            +KWR YLS   FVI T H+SL +L DQ L+T +Q+K + KL GL + ++YKKG ENKAAD
Sbjct: 987  EKWRCYLSRGPFVIRTDHRSLCHLQDQTLATDMQKKAMTKLAGLQFSVQYKKGAENKAAD 1046

Query: 1666 AXXXXXXXXXXXXXXXXXXXL-QDIQSSYEADTTAQYLITQLTVTQ-SHGNYSYSHGILK 1493
            A                     Q+I +SYE DT AQ L+ +L V+  +   +   +G++ 
Sbjct: 1047 ALSRVAHNMELSAISATTPVWLQEITNSYELDTHAQSLLAELAVSSPNEQGFELKNGLIY 1106

Query: 1492 FKSMIYIDSGNNLK----SSIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTTCD 1325
              + + +     L+    S+ + S +GGHSGI ATY R K  F W  +K+D+ QFV  C 
Sbjct: 1107 KNNRLVVGQNVGLQTKLISAFHASPLGGHSGIQATYQRVKKLFLWNGLKADVEQFVRQCH 1166

Query: 1324 ICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSHFI 1145
            +CQ  K E+    GLLQPL IP ++WQ +S+DFIEGL  S   + ILVVVDRLTKY+HF+
Sbjct: 1167 VCQQAKHEHCKYPGLLQPLPIPQSSWQDLSMDFIEGLPKSNGYSVILVVVDRLTKYAHFL 1226

Query: 1144 SLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTAYH 965
            ++ HPFTA  +A    S V KLHG P  IVSDR+K+F S FWQ LFK  GT L LS+AYH
Sbjct: 1227 AVKHPFTASHIAHLFFSQVVKLHGFPHTIVSDRDKVFTSTFWQELFKLSGTQLHLSSAYH 1286

Query: 964  PQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYGYD 785
            PQ+DGQTER N  +E +LRC   +   QW +WL  AE W+NT+YHTS+K  PF+ALYG +
Sbjct: 1287 PQSDGQTERVNQCLEMFLRCAVHNSPSQWAKWLDSAELWYNTSYHTSIKCSPFKALYGVE 1346

Query: 784  PPHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAVGDL 605
            P     P+  S + +  +  LQ+R   L+++   L+ AQ RMK +AD  R+ R+F +GDL
Sbjct: 1347 PNLGCIPVTDSLNPSEAQLTLQQRQEFLEVIKTNLASAQSRMKHYADLNRSFRQFQIGDL 1406

Query: 604  VFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVSQLK 425
            V+LKLQP+ Q SVA R   KLS KYFGPF+++ ++G+ AYKL L     IHPVFHVSQLK
Sbjct: 1407 VYLKLQPFAQVSVAYRPCAKLSFKYFGPFKIVDKVGSAAYKLLLPESANIHPVFHVSQLK 1466

Query: 424  KKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDATWE 245
              +     V  +LP    +      P  +LD R   +  + + QIL +W     E A+WE
Sbjct: 1467 THVPDYTPVFTELPPTAFSENVTPNPERILDRRLVKKGSAAVTQILIKWEGIPVEMASWE 1526

Query: 244  DAAHIYAQFPDFYP*GQGSLNGRGNV 167
            D   + ++FP+    G    +G G V
Sbjct: 1527 DYTVLQSRFPNSSIWGPAGASGGGTV 1552



 Score =  382 bits (982), Expect(2) = 0.0
 Identities = 188/315 (59%), Positives = 233/315 (73%)
 Frame = -1

Query: 2796 IQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFSK 2617
            I  S SPFA+P+LLVKKKDG+WRFCVDYRKLNDITVK+KF +P+I+E + EL G+ VFSK
Sbjct: 670  ITRSVSPFASPVLLVKKKDGSWRFCVDYRKLNDITVKNKFPMPIIDEFIDELAGAKVFSK 729

Query: 2616 IDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRKF 2437
            +D+  G++QIR+   D  KT F+TH GH++FRVM FGLTN PATFQ LMN VFQ  +RK 
Sbjct: 730  LDMAAGFHQIRMADQDEMKTAFKTHHGHFQFRVMPFGLTNAPATFQCLMNAVFQQLMRKC 789

Query: 2436 VLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASGV 2257
            VL+F DDILVYSPSLE H+ +LQ +  +L  H L+ K SKCAFA  Q+EYLG+II+  GV
Sbjct: 790  VLIFMDDILVYSPSLETHVVHLQQVFQVLETHQLYAKRSKCAFALTQIEYLGHIISDKGV 849

Query: 2256 GADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTDD 2077
              DP K  SM  WP P++  +LRGFLGLT YYRKF+K YG +   LT +L++  F W   
Sbjct: 850  STDPSKTESMRRWPTPKSHTELRGFLGLTGYYRKFVKGYGILAKPLTVLLQQKQFGWPPS 909

Query: 2076 TTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPKA 1897
               AF ++K AM T PVLALP+FS+ F++ETDAC  G+GAVL Q   P+AF+SK LG K 
Sbjct: 910  AQTAFEALKDAMITTPVLALPNFSETFVIETDACDTGIGAVLSQKGHPVAFYSKALGVKN 969

Query: 1896 LSLSTYEKEFSAIVM 1852
              LSTYEKEF AI+M
Sbjct: 970  SQLSTYEKEFLAILM 984


>ref|XP_010541181.1| PREDICTED: uncharacterized protein LOC104814705 [Tarenaya
            hassleriana]
          Length = 1805

 Score =  446 bits (1148), Expect(2) = 0.0
 Identities = 238/560 (42%), Positives = 340/560 (60%), Gaps = 14/560 (2%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            Q+WRHYL  + F++ T  ++LK+L++Q+  +   Q+WL KLLG D+ I Y+ G+ENKAAD
Sbjct: 1196 QRWRHYLLGRSFLVCTDQKALKFLLEQREVSMEYQRWLTKLLGYDFQIVYRPGVENKAAD 1255

Query: 1666 AXXXXXXXXXXXXXXXXXXXL-------QDIQSSYEADTTAQYLITQLTVTQSH-GNYSY 1511
                                         +++     D+  + ++++L   ++  G Y  
Sbjct: 1256 GLSRMPHNTILEPTCMGLAITIPRNIQLVEVEKEIGEDSDLKEIVSKLKEGETKVGKYHL 1315

Query: 1510 SHGILKFKSMIYIDSGNNLKSSI----YDSSVGGHSGITATYHRAKASFFWPNMKSDIIQ 1343
              G+L++K+ + +   ++   +I    +DS +GGHSG+  T  R +  F W  MK+DI +
Sbjct: 1316 LQGMLRYKNRLVVSKHSSFIPTILAEFHDSKMGGHSGVLRTLKRIQELFHWVGMKADIKK 1375

Query: 1342 FVTTCDICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLT 1163
            +V  C +CQ  K       GLLQPL IP+  W+ IS+DFIEGL  S   N +LVVVDRL+
Sbjct: 1376 YVAECAVCQSQKYSTLAPAGLLQPLPIPEHIWEDISMDFIEGLPRSAGYNVVLVVVDRLS 1435

Query: 1162 KYSHFISLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLK 983
            KY+HFI+L HPFTA+ VAK  +  V +LHG P  IVSDR+K+F+S FW  LF+  GT LK
Sbjct: 1436 KYAHFIALKHPFTAMVVAKVFVQEVVRLHGFPKSIVSDRDKVFLSNFWSELFRIAGTKLK 1495

Query: 982  LSTAYHPQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQ 803
             STAYHPQTDGQTE  N  +E YLRC    H ++W+Q+L+ AE+W+NT++HT+L+  PFQ
Sbjct: 1496 FSTAYHPQTDGQTEVLNRCLETYLRCYANDHPRKWIQFLSWAEFWYNTSFHTALQSTPFQ 1555

Query: 802  ALYGYDPPHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDRE 623
             +YG +PP L+     STS   +E  L+ERD M+  +  +L  AQ RMK  ADK R D  
Sbjct: 1556 IVYGREPPTLLKYEEGSTSNFELEKALRERDRMILEIKQKLQAAQQRMKVSADKGRRDLT 1615

Query: 622  FAVGDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVF 443
              VG+ V+LK++PYRQ ++A R N KL+A+Y+GPF++  R+G VAYKLKL  G  IHPVF
Sbjct: 1616 LTVGEWVYLKIRPYRQNTLAARSNQKLAARYYGPFQIESRMGEVAYKLKLPKGCNIHPVF 1675

Query: 442  HVSQLKKKLGLQAAVSP-QLP-LVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNS 269
            H+SQLKK LG    + P QLP  +    +  V+P  + D+R T        ++L +W + 
Sbjct: 1676 HISQLKKALG--GNIQPNQLPRQLTRDLELQVQPKDIKDSRYTKEGR---LEVLVEWQDL 1730

Query: 268  APEDATWEDAAHIYAQFPDF 209
               ++TWE A     QFP F
Sbjct: 1731 PEHESTWEVAEDFNKQFPSF 1750



 Score =  405 bits (1041), Expect(2) = 0.0
 Identities = 190/316 (60%), Positives = 245/316 (77%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +++PS SPF++P+LLVKKKDG+WRFC+DYR LN +TV DKF IP+I++LL EL+G+ VFS
Sbjct: 878  IVRPSQSPFSSPVLLVKKKDGSWRFCIDYRALNKVTVLDKFPIPMIDQLLDELHGARVFS 937

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIR+   DI KT FRTH GHYEF VM FGLTN PATFQALMNE+F+PYLRK
Sbjct: 938  KLDLRSGYHQIRMKTEDIPKTAFRTHDGHYEFLVMPFGLTNAPATFQALMNEIFRPYLRK 997

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            FVLVFFDDILVYS SL+ H  +LQ +L++L+KH L+    KC F + Q++YLG+II+  G
Sbjct: 998  FVLVFFDDILVYSCSLQDHATHLQTVLAVLQKHKLYANKKKCEFGRQQIDYLGHIISQEG 1057

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTD 2080
            V  DP K A+M  WP P  +K+LRGFLGLT YYR+F+++YG I   LTD+LKKD F+W++
Sbjct: 1058 VSTDPAKTAAMQKWPTPSNVKELRGFLGLTGYYRRFVQNYGTIARPLTDLLKKDGFNWSE 1117

Query: 2079 DTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPK 1900
            D + AF  +K AMT+APVL LPDF + F++ETDA   G+GAVLMQ  +PIAFFS+ L  +
Sbjct: 1118 DASSAFRKLKQAMTSAPVLGLPDFREDFVVETDASGFGIGAVLMQKHRPIAFFSQALSER 1177

Query: 1899 ALSLSTYEKEFSAIVM 1852
                  YE+E  A+V+
Sbjct: 1178 ERLKPVYERELMAVVL 1193



 Score =  405 bits (1041), Expect(2) = e-123
 Identities = 190/316 (60%), Positives = 245/316 (77%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +++PS SPF++P+LLVKKKDG+WRFC+DYR LN +TV DKF IP+I++LL EL+G+ VFS
Sbjct: 6    IVRPSQSPFSSPVLLVKKKDGSWRFCIDYRALNKVTVLDKFPIPMIDQLLDELHGARVFS 65

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIR+   DI KT FRTH GHYEF VM FGLTN PATFQALMNE+F+PYLRK
Sbjct: 66   KLDLRSGYHQIRMKTEDIPKTAFRTHDGHYEFLVMPFGLTNAPATFQALMNEIFRPYLRK 125

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            FVLVFFDDILVYS SL+ H  +LQ +L++L+KH L+    KC F + Q++YLG+II+  G
Sbjct: 126  FVLVFFDDILVYSCSLQDHATHLQTVLAVLQKHKLYANKKKCEFGRQQIDYLGHIISQEG 185

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTD 2080
            V  DP K A+M  WP P  +K+LRGFLGLT YYR+F+++YG I   LTD+LKKD F+W++
Sbjct: 186  VSTDPAKTAAMQKWPTPSNVKELRGFLGLTGYYRRFVQNYGTIARPLTDLLKKDGFNWSE 245

Query: 2079 DTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPK 1900
            D + AF  +K AMT+APVL LPDF + F++ETDA   G+GAVLMQ  +PIAFFS+ L  +
Sbjct: 246  DASSAFRKLKQAMTSAPVLGLPDFREDFVVETDASGFGIGAVLMQKHRPIAFFSQALSER 305

Query: 1899 ALSLSTYEKEFSAIVM 1852
                  YE+E  A+V+
Sbjct: 306  ERLKPVYERELMAVVL 321



 Score = 67.8 bits (164), Expect(2) = e-123
 Identities = 29/60 (48%), Positives = 44/60 (73%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            Q+WRHYL  + F++ T  ++LK+L++Q+  +   Q+WL KLLG D+ I Y+ G+ENKAAD
Sbjct: 324  QRWRHYLLGRSFLVCTDQKALKFLLEQREVSMEYQRWLTKLLGYDFQIVYRPGVENKAAD 383


>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 937

 Score =  465 bits (1196), Expect(2) = 0.0
 Identities = 260/566 (45%), Positives = 337/566 (59%), Gaps = 6/566 (1%)
 Frame = -3

Query: 1843 KWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAADA 1664
            KWR YL    F+I T H+ L +L DQ L T LQQK + KL+GL Y  +YK+G+ N  ADA
Sbjct: 362  KWRCYLQRGPFIIKTYHKILCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVNNIVADA 421

Query: 1663 XXXXXXXXXXXXXXXXXXXL-QDIQSSYEADTTAQYLITQLTVTQSHGN-YSYSHGILKF 1490
                                 Q++ +SY  D  AQ L+ +L V   +   YS + GI++F
Sbjct: 422  LSRMPSSSQFCAFSVVQPIWIQEMINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIRF 481

Query: 1489 KSMIYIDSGNNLKSSI----YDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTTCDI 1322
            ++ I+I S   L + +    + S++GGHSGI ATYHR K  F WP +K D+  FV  C +
Sbjct: 482  QNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHRIKKLFAWPGLKLDVENFVKQCQV 541

Query: 1321 CQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSHFIS 1142
            CQ  K E+  L GLL PL IP  AWQ IS+DFIEGL  S   N ILVVVDR TKY++FI 
Sbjct: 542  CQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFTKYANFIP 601

Query: 1141 LGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTAYHP 962
            L HPFTA  VA  +   VFK HG+P  IVSDR+++F S+FW  LF +  T L++STAYHP
Sbjct: 602  LRHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMSTAYHP 661

Query: 961  QTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYGYDP 782
            QTDGQ ER N  +E YLRCMT ++ K+W  W+ LAE+W+NTNYHT L   P +AL+G DP
Sbjct: 662  QTDGQIERVNQCLEMYLRCMTQANPKKWSHWIHLAEFWYNTNYHTYLGCSPHKALFGVDP 721

Query: 781  PHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAVGDLV 602
             +   P  T  ++  V +   ER  + + L  +L++AQ RMK   DK R+DR FAVGD V
Sbjct: 722  HYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLTRAQLRMKNKVDKGRSDRVFAVGDAV 781

Query: 601  FLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVSQLKK 422
            FLKLQPY Q+SV  R   KL+ K+FGPF VL+RIG  AY+L L     +HPVFHVSQLK 
Sbjct: 782  FLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLERIGVAAYRLDLPASSTVHPVFHVSQLKA 841

Query: 421  KLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDATWED 242
            ++     V   LP         V P A+L+ R   R  +   Q+L +W +   + ATWED
Sbjct: 842  QVPDHTPVYTSLPSQVVLDAADVVPEAILERRLVKRSNAAHVQVLLKWSSLPADHATWED 901

Query: 241  AAHIYAQFPDFYP*GQGSLNGRGNVM 164
               +  +FPD    GQ      G VM
Sbjct: 902  YHVVKTRFPDAPAWGQAETPAGGTVM 927



 Score =  386 bits (991), Expect(2) = 0.0
 Identities = 187/316 (59%), Positives = 238/316 (75%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +I PS SP+A+P+LLVKKKDG+WRFCVDYR+LN +T+K KF +P+++ELL EL+G+  FS
Sbjct: 43   LITPSMSPYASPVLLVKKKDGSWRFCVDYRRLNALTIKSKFPMPVVDELLDELSGTKFFS 102

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DL+ GY+QIR+   D  KT F+TH G ++FRVM FGLTN P+TFQ LMN V  P++RK
Sbjct: 103  KLDLKAGYHQIRMVETDEAKTAFKTHHGQFQFRVMPFGLTNAPSTFQCLMNSVLAPFIRK 162

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            FVLVF DDILVYSP L++HL +LQ +  +LR+H LF + SKC+FA  QLEYLG+II+  G
Sbjct: 163  FVLVFMDDILVYSPDLDSHLHHLQQVFVILRQHQLFARRSKCSFACTQLEYLGHIISDKG 222

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTD 2080
            V  DPEK A+M+ WP P ++ +LRGFLGLT YYRKF++ Y  I   LT +LKK  F WTD
Sbjct: 223  VSTDPEKTAAMLAWPVPTSVTELRGFLGLTGYYRKFVQGYSIIARPLTLLLKKKAFLWTD 282

Query: 2079 DTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPK 1900
                AF  +K AM+  P+LALP+F  PF LETDAC+ G+GAVL Q   PIA++SK LGP 
Sbjct: 283  AAQLAFDQLKTAMSNTPMLALPNFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLGPV 342

Query: 1899 ALSLSTYEKEFSAIVM 1852
               LS YEKEF AI+M
Sbjct: 343  NQKLSIYEKEFLAIMM 358


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  464 bits (1193), Expect(2) = 0.0
 Identities = 253/565 (44%), Positives = 341/565 (60%), Gaps = 6/565 (1%)
 Frame = -3

Query: 1843 KWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAADA 1664
            K+RHYL   +F+I T  +SLK LMDQ L T  QQ WL K LG D+ I+YK G +N+AADA
Sbjct: 944  KFRHYLLGNKFIIRTDQRSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYKPGKDNQAADA 1003

Query: 1663 XXXXXXXXXXXXXXXXXXXLQDIQSSYEADTTAQYLITQLTVTQSHGNYSYSHGILKFKS 1484
                                +++++   +D   + L+          +Y+   G+L +K 
Sbjct: 1004 LSRMFMLAWSEPHSIFL---EELRARLISDPHLKQLMETYKQGADASHYTVREGLLYWKD 1060

Query: 1483 MIYIDSGNNLKSSI----YDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTTCDICQ 1316
             + I +   + + I    + S +GGH+GIT T  R KA F+WP M+ D+  ++  C ICQ
Sbjct: 1061 RVVIPAEEEIVNKILQEYHSSPIGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCLICQ 1120

Query: 1315 CHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSHFISLG 1136
              K  N+L  GLLQPL IP   W+ +++DFI GL  S+  + I+VV+DRLTKY+HFI L 
Sbjct: 1121 QAKSNNTLPAGLLQPLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLK 1180

Query: 1135 HPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTAYHPQT 956
              + +  VA+  +SH+ KLHG+P  IVSDR+++F S FWQ LFK  GTTL +S+AYHPQ+
Sbjct: 1181 ADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQS 1240

Query: 955  DGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYGYDPPH 776
            DGQ+E  N  +E YLRC T  H K WV+ L  AE+W+NT YH SL M PF+ALYG +PP 
Sbjct: 1241 DGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGREPPT 1300

Query: 775  LVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAVGDLVFL 596
            L     +    A V   L +RD +L  L   L++AQ  MK  ADKKR D  F +GD V +
Sbjct: 1301 LTRQACSIDDPAEVREQLTDRDALLAKLKINLTRAQQVMKRQADKKRLDVSFQIGDEVLV 1360

Query: 595  KLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVSQLKKKL 416
            KLQPYRQ S  +R+N KLS +YFGPF+VL +IG VAYKL+L    RIHPVFHVSQLK   
Sbjct: 1361 KLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIGDVAYKLELPSAARIHPVFHVSQLKPFN 1420

Query: 415  GLQAAVSPQLPLVDHARQF--VVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDATWED 242
            G   A  P LPL     +   V++P+ +L +R  +R ++ I+QIL QW N   ++ATWED
Sbjct: 1421 G--TAQDPYLPLPLTVTEMGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWED 1478

Query: 241  AAHIYAQFPDFYP*GQGSLNGRGNV 167
               I A +P F    +    G GNV
Sbjct: 1479 IEDIKASYPTFNLEDKVVFKGEGNV 1503



 Score =  381 bits (979), Expect(2) = 0.0
 Identities = 188/314 (59%), Positives = 234/314 (74%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +IQPS+SPF+ PILLVKKKDG+WRFC DYR LN ITVKD F +P ++ELL EL+G+  FS
Sbjct: 625  IIQPSNSPFSLPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFS 684

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QI V   D  KT FRTH GHYE+ VM FGLTN PATFQ LMN++FQ  LRK
Sbjct: 685  KLDLRSGYHQILVQPEDREKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRK 744

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            FVLVFFDDIL+YS S + HL++L+ +L  L++H LF +LSKC+F   +++YLG+ ++  G
Sbjct: 745  FVLVFFDDILIYSASWKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLG 804

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTD 2080
            V  +  KV ++++WP P  +KQLRGFLGLT YYR+FIK Y NI   LTD+L+KD F W +
Sbjct: 805  VSMENTKVQAVLDWPTPNNVKQLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKDSFLWNN 864

Query: 2079 DTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPK 1900
            +   AF  +K AMT APVL+LPDFSQPFILETDA   GVGAVL Q   PIA+FSK L P+
Sbjct: 865  EAEAAFVKLKKAMTEAPVLSLPDFSQPFILETDASGIGVGAVLGQNGHPIAYFSKKLAPR 924

Query: 1899 ALSLSTYEKEFSAI 1858
                S Y +E  AI
Sbjct: 925  MQKQSAYTRELLAI 938


>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1923

 Score =  464 bits (1194), Expect(2) = 0.0
 Identities = 251/571 (43%), Positives = 344/571 (60%), Gaps = 10/571 (1%)
 Frame = -3

Query: 1843 KWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAADA 1664
            +WR YL   +FVI T H +L ++ DQ+L T LQ K   KL+GL Y + Y++G  N AADA
Sbjct: 423  QWRSYLQHDEFVILTDHHNLMHITDQRLHTPLQHKAFTKLMGLQYKVCYRRGTSNAAADA 482

Query: 1663 XXXXXXXXXXXXXXXXXXXL---QDIQSSYEADTTAQYLITQLTV-TQSHGNYSYSHGIL 1496
                                     +   YE D  AQ L+T+L +   +  ++    G+L
Sbjct: 483  LSRRDEETNDQLWAVSECQPLWLTAVVKGYETDEQAQQLLTELALHPTAREHFHLVQGVL 542

Query: 1495 KFKSMIYIDSGNNLK------SSIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVT 1334
            ++K  I+I  G+NL       ++++ S +GGHSG   TY R KA F WP MK  I Q+V 
Sbjct: 543  RYKGKIWI--GHNLSLQQQLVTALHASPIGGHSGFPVTYQRVKALFAWPQMKKMIQQWVK 600

Query: 1333 TCDICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYS 1154
             C ICQ  K + +   GLLQPL IP+ AWQ +SLDFIEGL  S + N ILVVVD+ ++Y+
Sbjct: 601  NCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGLPKSERYNCILVVVDKFSRYA 660

Query: 1153 HFISLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLST 974
            HF+ L HPF+A+ VA   + +++KLHG+P  ++SDR+KIF S+ W+ LF   G  L LS+
Sbjct: 661  HFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLISDRDKIFTSKLWEFLFLKSGIALHLSS 720

Query: 973  AYHPQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALY 794
            AYHPQ+DGQT+R N  +E +LRC T +   +WV WL LA +W+NT +H++L   PF+ LY
Sbjct: 721  AYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLHLAGYWYNTCFHSALNKTPFEVLY 780

Query: 793  GYDPPHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAV 614
            G++P  L   + T  ++  +  +L ER LM +LL   L + Q +MKF ADK R+ REFAV
Sbjct: 781  GHNPLQLGVTMET-CAIPDLAVWLHERKLMAELLQQHLHRVQQKMKFHADKNRSFREFAV 839

Query: 613  GDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVS 434
            GD VFLKLQPY Q SVA R   KL+ K++GPF++L R+GTVAYKL+L     IHPVFHVS
Sbjct: 840  GDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILARVGTVAYKLQLPDDSTIHPVFHVS 899

Query: 433  QLKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDA 254
            QLK   G +  V  +LP      +  V P+ +LD R   +    + Q+L  W +S  EDA
Sbjct: 900  QLKVAHGFKHQVQSRLP---KFLKSTVYPLQILDQRLIRKGNRTVSQVLVYWSDSVAEDA 956

Query: 253  TWEDAAHIYAQFPDFYP*GQGSLNGRGNVMI 161
            TWED   +  +FP     GQ +  G G V I
Sbjct: 957  TWEDREDLQQRFPMALAWGQATFQGEGVVKI 987



 Score =  377 bits (968), Expect(2) = 0.0
 Identities = 185/317 (58%), Positives = 236/317 (74%), Gaps = 1/317 (0%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            VIQ S+S F++P LLVKKKDGTWR C+DY+ LN IT+K K+ +P+I+ELL EL+G+  FS
Sbjct: 103  VIQNSNSAFSSPALLVKKKDGTWRLCIDYKHLNAITIKGKYPLPVIDELLDELSGAKYFS 162

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIR+   + HKT F+TH GHYE+RVMSFGLT  PATFQ  MN+     LRK
Sbjct: 163  KLDLRAGYHQIRLQPGEEHKTAFQTHSGHYEYRVMSFGLTGAPATFQKAMNDTLATVLRK 222

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            F LVFFDDIL+YSP L +H+++L+ +L LL+      KLSKC+FAQ QL YLG+II   G
Sbjct: 223  FTLVFFDDILIYSPDLPSHIQHLEQVLQLLQAQQWKVKLSKCSFAQQQLAYLGHIIGKDG 282

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDY-FSWT 2083
            V  DP K+A +++W  PQ++KQLRGFLGL  YYRKF++++G I   LT +LKK   F WT
Sbjct: 283  VTTDPSKIADVLHWKIPQSVKQLRGFLGLAGYYRKFVRNFGTINKPLTQLLKKGVPFKWT 342

Query: 2082 DDTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGP 1903
                 AF+++K A+ +APVLALPDFS+ F +ETDAC  G+GAVL Q   PIAF SK LGP
Sbjct: 343  AQMDEAFNALKQALVSAPVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAFVSKALGP 402

Query: 1902 KALSLSTYEKEFSAIVM 1852
            K   LSTYEKE+ AI++
Sbjct: 403  KTRGLSTYEKEYLAILL 419


>gb|ABF93966.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1920

 Score =  464 bits (1194), Expect(2) = 0.0
 Identities = 251/571 (43%), Positives = 344/571 (60%), Gaps = 10/571 (1%)
 Frame = -3

Query: 1843 KWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAADA 1664
            +WR YL   +FVI T H +L ++ DQ+L T LQ K   KL+GL Y + Y++G  N AADA
Sbjct: 423  QWRSYLQHDEFVILTDHHNLMHITDQRLHTPLQHKAFTKLMGLQYKVCYRRGTSNAAADA 482

Query: 1663 XXXXXXXXXXXXXXXXXXXL---QDIQSSYEADTTAQYLITQLTV-TQSHGNYSYSHGIL 1496
                                     +   YE D  AQ L+T+L +   +  ++    G+L
Sbjct: 483  LSRRDEETNDQLWAVSECQPLWLTAVVKGYETDEQAQQLLTELALHPTAREHFHLVQGVL 542

Query: 1495 KFKSMIYIDSGNNLK------SSIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVT 1334
            ++K  I+I  G+NL       ++++ S +GGHSG   TY R KA F WP MK  I Q+V 
Sbjct: 543  RYKGKIWI--GHNLSLQQQLVTALHASPIGGHSGFPVTYQRVKALFAWPQMKKMIQQWVK 600

Query: 1333 TCDICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYS 1154
             C ICQ  K + +   GLLQPL IP+ AWQ +SLDFIEGL  S + N ILVVVD+ ++Y+
Sbjct: 601  NCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGLPKSERYNCILVVVDKFSRYA 660

Query: 1153 HFISLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLST 974
            HF+ L HPF+A+ VA   + +++KLHG+P  ++SDR+KIF S+ W+ LF   G  L LS+
Sbjct: 661  HFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLISDRDKIFTSKLWEFLFLKSGIALHLSS 720

Query: 973  AYHPQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALY 794
            AYHPQ+DGQT+R N  +E +LRC T +   +WV WL LA +W+NT +H++L   PF+ LY
Sbjct: 721  AYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLHLAGYWYNTCFHSALNKTPFEVLY 780

Query: 793  GYDPPHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAV 614
            G++P  L   + T  ++  +  +L ER LM +LL   L + Q +MKF ADK R+ REFAV
Sbjct: 781  GHNPLQLGVTMET-CAIPDLAVWLHERKLMAELLQQHLHRVQQKMKFHADKNRSFREFAV 839

Query: 613  GDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVS 434
            GD VFLKLQPY Q SVA R   KL+ K++GPF++L R+GTVAYKL+L     IHPVFHVS
Sbjct: 840  GDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILARVGTVAYKLQLPDDSTIHPVFHVS 899

Query: 433  QLKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDA 254
            QLK   G +  V  +LP      +  V P+ +LD R   +    + Q+L  W +S  EDA
Sbjct: 900  QLKVAHGFKHQVQSRLP---KFLKSTVYPLQILDQRLIRKGNRTVSQVLVYWSDSVAEDA 956

Query: 253  TWEDAAHIYAQFPDFYP*GQGSLNGRGNVMI 161
            TWED   +  +FP     GQ +  G G V I
Sbjct: 957  TWEDREDLQQRFPMALAWGQATFQGEGVVKI 987



 Score =  377 bits (968), Expect(2) = 0.0
 Identities = 185/317 (58%), Positives = 236/317 (74%), Gaps = 1/317 (0%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            VIQ S+S F++P LLVKKKDGTWR C+DY+ LN IT+K K+ +P+I+ELL EL+G+  FS
Sbjct: 103  VIQNSNSAFSSPALLVKKKDGTWRLCIDYKHLNAITIKGKYPLPVIDELLDELSGAKYFS 162

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIR+   + HKT F+TH GHYE+RVMSFGLT  PATFQ  MN+     LRK
Sbjct: 163  KLDLRAGYHQIRLQPGEEHKTAFQTHSGHYEYRVMSFGLTGAPATFQKAMNDTLATVLRK 222

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            F LVFFDDIL+YSP L +H+++L+ +L LL+      KLSKC+FAQ QL YLG+II   G
Sbjct: 223  FTLVFFDDILIYSPDLPSHIQHLEQVLQLLQAQQWKVKLSKCSFAQQQLAYLGHIIGKDG 282

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDY-FSWT 2083
            V  DP K+A +++W  PQ++KQLRGFLGL  YYRKF++++G I   LT +LKK   F WT
Sbjct: 283  VTTDPSKIADVLHWKIPQSVKQLRGFLGLAGYYRKFVRNFGTINKPLTQLLKKGVPFKWT 342

Query: 2082 DDTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGP 1903
                 AF+++K A+ +APVLALPDFS+ F +ETDAC  G+GAVL Q   PIAF SK LGP
Sbjct: 343  AQMDEAFNALKQALVSAPVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAFVSKALGP 402

Query: 1902 KALSLSTYEKEFSAIVM 1852
            K   LSTYEKE+ AI++
Sbjct: 403  KTRGLSTYEKEYLAILL 419


>gb|ABA97104.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1412

 Score =  459 bits (1181), Expect(2) = 0.0
 Identities = 248/529 (46%), Positives = 329/529 (62%), Gaps = 8/529 (1%)
 Frame = -3

Query: 1840 WRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAADAX 1661
            WR YL  Q+FVI T H SL +L +Q+L T  Q K   KLLGL + I Y+KG  N AA+A 
Sbjct: 880  WRSYLQQQEFVILTDHHSLMHLNEQRLHTPWQHKAFTKLLGLQFKICYRKGSSNAAANAL 939

Query: 1660 XXXXXXXXXXXXXXXXXXL---QDIQSSYEADTTAQYLITQLTVT-QSHGNYSYSHGILK 1493
                                  Q++   Y  D  +  L+T LT+  +S  N+S  +G+L+
Sbjct: 940  SRKYPEELSELHVVSSCSPVWLQEVSDGYLQDVFSAQLLTDLTLNAESRPNFSLCNGVLR 999

Query: 1492 FKSMIYIDSGNNLK----SSIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTTCD 1325
            FK  ++ID+  +++    S+++ S +GGHSG   TY + K+ F WP MK  I   V TC 
Sbjct: 1000 FKGRVWIDNNPSVQDKIISALHSSPLGGHSGFPVTYSKIKSLFAWPKMKKQIHTAVKTCG 1059

Query: 1324 ICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSHFI 1145
            IC   K ++S   GLLQPL +PD AWQ I++DFIEGL  S + N ILVVVD+ +KYSHF 
Sbjct: 1060 ICMQAKPDHSKYPGLLQPLPVPDGAWQIITMDFIEGLPKSGQFNCILVVVDKFSKYSHFF 1119

Query: 1144 SLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTAYH 965
             L HPF+AI VA+  + +V+KLHGLP +I+SDR+KI  S FW+ LF   GT L+LSTAYH
Sbjct: 1120 PLSHPFSAIDVAQSFMVNVYKLHGLPKFIISDRDKILTSHFWEQLFLRTGTQLQLSTAYH 1179

Query: 964  PQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYGYD 785
             QTD QTER N  +E YLRC   +   +W  WL LAE+WFNT+YH+++   PF+ALYGY 
Sbjct: 1180 LQTDEQTERVNQCLEIYLRCFVHAVPHKWSSWLYLAEFWFNTSYHSAILQSPFEALYGYP 1239

Query: 784  PPHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAVGDL 605
            P H       + SV  +  +L ER +M QLL   L++AQ +MK +ADKK + REF+  D 
Sbjct: 1240 PGHFGIR-DDACSVPDLHEWLNERKVMTQLLKQHLNRAQQQMKLYADKKCSFREFSNVDW 1298

Query: 604  VFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVSQLK 425
            V+LKLQPY Q+SVA R N KLS +YFGPF+VL R+G VAYKL L     IHPVFHVSQLK
Sbjct: 1299 VYLKLQPYIQSSVAKRANHKLSFRYFGPFQVLYRVGKVAYKLSLSAESSIHPVFHVSQLK 1358

Query: 424  KKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQW 278
              +G + +V P LP     +     P+AVL +R   +  S+  Q+L +W
Sbjct: 1359 HAVGFRHSVQPCLPACSDLK----VPVAVLASRQIRKGNSVKAQVLIRW 1403



 Score =  382 bits (980), Expect(2) = 0.0
 Identities = 189/317 (59%), Positives = 237/317 (74%), Gaps = 1/317 (0%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            VIQPS+S F++P LLVKKKDGTWR C+DYR+LN IT+K KF +P+I+ELL EL+GS VFS
Sbjct: 559  VIQPSNSAFSSPALLVKKKDGTWRLCIDYRQLNSITMKGKFPMPVIDELLDELSGSKVFS 618

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIR+   + HKT F+TH GHYE+RVMSFGLT  PATFQ  MN+   P LRK
Sbjct: 619  KLDLRAGYHQIRLVEGEEHKTTFQTHSGHYEYRVMSFGLTGAPATFQGAMNDTLAPVLRK 678

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            F LVFFDDILVYSP L +H+ +L+ +L LL +H    KLSKC+FAQ QL YLG+II+   
Sbjct: 679  FALVFFDDILVYSPDLVSHVHHLRQVLQLLTEHQWKVKLSKCSFAQHQLSYLGHIISDQR 738

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDY-FSWT 2083
            V  DP K+  +VNW  P+ +K+LRGFLGL  YYRKF+K +G +   LT++LKKD  F W+
Sbjct: 739  VTTDPAKIEEVVNWAVPKFVKKLRGFLGLAGYYRKFVKQFGILCRPLTNLLKKDVPFVWS 798

Query: 2082 DDTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGP 1903
             +   AF ++K A+ +APVL+LPDFS PF +ETDA   G+GAVL Q   PIAF SK LG 
Sbjct: 799  VEADQAFKALKQALVSAPVLSLPDFSLPFTIETDASDEGIGAVLSQCGHPIAFLSKALGV 858

Query: 1902 KALSLSTYEKEFSAIVM 1852
            K   LSTYEKE+ AI++
Sbjct: 859  KTKGLSTYEKEYLAILL 875


>ref|XP_006365576.1| PREDICTED: uncharacterized protein LOC102595311 [Solanum tuberosum]
          Length = 1907

 Score =  438 bits (1127), Expect(2) = 0.0
 Identities = 239/565 (42%), Positives = 325/565 (57%), Gaps = 5/565 (0%)
 Frame = -3

Query: 1846 QKWRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAAD 1667
            QKWRHYL  +  +I T  +SL++LM Q +    QQKW+ KL+G D+ I+Y+ G ENKAAD
Sbjct: 962  QKWRHYLMGKHIIIRTDQRSLQFLMGQHVMAEEQQKWVTKLMGFDFEIQYRPGCENKAAD 1021

Query: 1666 AXXXXXXXXXXXXXXXXXXXLQDIQSSYEADTTAQYLITQLTVTQ-SHGNYSYSHGILKF 1490
            A                     D+ +  + D   + L  +L     S  NY   +G L F
Sbjct: 1022 ALSRQFHFMAFSVLRSSTL--DDLSTEIQQDDQLRKLTQELLQNPASRPNYVLKNGCLFF 1079

Query: 1489 KSMIYIDSGN----NLKSSIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTTCDI 1322
            KS + I   +     L    + S  GGHSG   TY R     +W  +K D+  +V +C++
Sbjct: 1080 KSRLVIPRSSLHIPTLLREFHSSPTGGHSGFFRTYKRISQVLYWNGIKRDVQNYVASCEV 1139

Query: 1321 CQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSHFIS 1142
            C+ +K E   L GLLQPL IP   W  I++DFI GL  +   + ILVVVD  TKY HF+ 
Sbjct: 1140 CKQNKYEALSLAGLLQPLPIPTQVWNDIAMDFISGLPKAMGHDTILVVVDHFTKYCHFLL 1199

Query: 1141 LGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTAYHP 962
            L HP+TA +VA+  +  + +LHG P  IVSDR++IF+SQFWQ LFK  GT+LKLS+ YHP
Sbjct: 1200 LCHPYTAKSVAELFVREIVRLHGFPKTIVSDRDRIFVSQFWQELFKLSGTSLKLSSGYHP 1259

Query: 961  QTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYGYDP 782
            QTDGQTE  N S+E YLRC + +H KQW +W+  AE+WFNT YH S KM PF+ALYG DP
Sbjct: 1260 QTDGQTEVVNRSLETYLRCFSGAHPKQWPRWIPWAEFWFNTTYHGSAKMTPFRALYGRDP 1319

Query: 781  PHLVFPIPTSTSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAVGDLV 602
            P L+      ++V  V   L  R+ +L  L D L  AQ +MK +AD KR +  F  GDLV
Sbjct: 1320 PSLLRFTDEISAVEEVNQQLMARNNILDELKDNLIHAQAQMKVYADAKRREVVFQPGDLV 1379

Query: 601  FLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVSQLKK 422
            +L++QP++  S+A + N KLS +Y+GP+ +L +IG VAY+L L    R+HPVFHVS LK+
Sbjct: 1380 YLRVQPFKLRSLAKKVNQKLSPRYYGPYTILNKIGEVAYRLDLPPHSRVHPVFHVSWLKR 1439

Query: 421  KLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDATWED 242
             +     V    P +    +  V+P  V+D    L      K++L +W      + TWE 
Sbjct: 1440 AVKDSTPVQQLPPFLSDELELQVQPEGVVDCHTLLNG---SKEVLIKWEGLPDFENTWES 1496

Query: 241  AAHIYAQFPDFYP*GQGSLNGRGNV 167
               I AQFP F+   +  L G G V
Sbjct: 1497 YEIIDAQFPHFHLEDKVKLVGAGIV 1521



 Score =  402 bits (1033), Expect(2) = 0.0
 Identities = 197/315 (62%), Positives = 239/315 (75%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            +IQPS SPF++P+LLV+KKDG+WRFCVDYR LN ITV DKF IP I+ELL EL G+ VFS
Sbjct: 644  IIQPSTSPFSSPVLLVRKKDGSWRFCVDYRALNKITVPDKFPIPAIDELLDELGGATVFS 703

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIRV   D+ KT FRTH+GHYEF VM FGL+N P+TFQALMNE+F+ +LRK
Sbjct: 704  KLDLRSGYHQIRVCKEDVAKTAFRTHEGHYEFLVMPFGLSNAPSTFQALMNEIFRLHLRK 763

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            FVLVFFDDILVYS     HL +L+ +L +L+ H+L     KC F QPQLEYLG+II+ASG
Sbjct: 764  FVLVFFDDILVYSADFSTHLGHLREVLQILKHHNLVVNRKKCHFGQPQLEYLGHIISASG 823

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDYFSWTD 2080
            V ADP K+ SM+NWP P+ +K LRGFLGLT YYRKF++DYG I   LT +LKKD F W  
Sbjct: 824  VSADPAKITSMINWPNPKDVKGLRGFLGLTGYYRKFVRDYGKIARPLTQLLKKDAFHWNK 883

Query: 2079 DTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGPK 1900
            +   AF S+K AM T PVLALP+F + F++ETDA   G+GAVLMQ   PIAF S+    +
Sbjct: 884  EAQLAFESLKEAMVTLPVLALPNFKKVFVVETDASGLGIGAVLMQEGHPIAFLSQGFSIR 943

Query: 1899 ALSLSTYEKEFSAIV 1855
            A S S YE+E  AIV
Sbjct: 944  AQSKSVYERELMAIV 958


>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
          Length = 1602

 Score =  480 bits (1235), Expect(2) = 0.0
 Identities = 261/572 (45%), Positives = 344/572 (60%), Gaps = 11/572 (1%)
 Frame = -3

Query: 1840 WRHYLSSQQFVIHTCHQSLKYLMDQKLSTALQQKWLVKLLGLDYVIKYKKGMENKAADAX 1661
            WR YL   +F+I T H SL +L DQ+L T  Q K   KLLGL Y I Y+KG  N AADA 
Sbjct: 971  WRSYLQHGEFIILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYKICYRKGSSNAAADAL 1030

Query: 1660 XXXXXXXXXXXXXXXXXXLQ---DIQSSYEADTTAQYLITQLTV-TQSHGNYSYSHGILK 1493
                               Q   ++   YE D  A  L++ L +  + H +Y   +GI++
Sbjct: 1031 SRKFQDSNSEIFAISSSVPQWLMEVTQGYEKDAQAAKLLSTLAIHPEKHIHYFLDNGIIR 1090

Query: 1492 FKSMIYIDSGNN------LKSSIYDSSVGGHSGITATYHRAKASFFWPNMKSDIIQFVTT 1331
            +K+ I++  GNN      L   ++ S VGGHSG   TY + K  F WPNMK  I + V  
Sbjct: 1091 YKNRIWV--GNNPELQLKLIRELHASPVGGHSGFPVTYRKIKQLFAWPNMKKMIKESVQR 1148

Query: 1330 CDICQCHKGENSLLGGLLQPLTIPDTAWQHISLDFIEGLRMSYKKNDILVVVDRLTKYSH 1151
            C +C   K +     GLLQPL +P+ +WQ +SLDFIEGL  S   N ILVVVDR +KY+H
Sbjct: 1149 CQVCLQAKPDRLKYPGLLQPLPVPEGSWQAVSLDFIEGLPKSAGYNCILVVVDRFSKYAH 1208

Query: 1150 FISLGHPFTAITVAKELLSHVFKLHGLPSYIVSDREKIFISQFWQALFKSLGTTLKLSTA 971
            F++L HPFTAI VA+  + H++KLHGLP  IVSDR+KIF SQ W+ LF   GT L  S+A
Sbjct: 1209 FVALKHPFTAIDVAQAYMFHIYKLHGLPQTIVSDRDKIFTSQLWEQLFLRAGTKLHYSSA 1268

Query: 970  YHPQTDGQTERTNASIEQYLRCMTISHHKQWVQWLALAEWWFNTNYHTSLKMLPFQALYG 791
            YHPQ+DGQTER N  +E YLRC   S   +W  WL LAE+W+N+ YH+SL   PF+ LYG
Sbjct: 1269 YHPQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWLHLAEYWYNSTYHSSLGTTPFEVLYG 1328

Query: 790  YDPPHLVFPIPT-STSVATVENYLQERDLMLQLLNDELSKAQHRMKFFADKKRNDREFAV 614
            Y P H  F I +   ++  +  +L++R  M QL+   L +AQ +MK FADKKR+ R+F +
Sbjct: 1329 YPPNH--FGISSRDCAIPELSVWLRDRKFMQQLVQQHLHRAQQQMKHFADKKRSFRQFTI 1386

Query: 613  GDLVFLKLQPYRQTSVAVRQN*KLSAKYFGPFEVLQRIGTVAYKLKLHVGFRIHPVFHVS 434
            GD V+LKLQPY Q+SVA R N KL+ KY+GPF+V+ ++GTVAYKL+L     +HPVFHVS
Sbjct: 1387 GDWVYLKLQPYVQSSVAPRANHKLAFKYYGPFQVIDKLGTVAYKLQLPETSSVHPVFHVS 1446

Query: 433  QLKKKLGLQAAVSPQLPLVDHARQFVVEPIAVLDTRNTLRDYSIIKQILFQWCNSAPEDA 254
             LK   G       QLP    + Q    P+A+LD R   +  S+I Q+L  W ++ PE A
Sbjct: 1447 LLKPAKGFTQPAFLQLPSEVVSWQL---PLAILDQRLAKKGNSVITQVLIHWSHTVPEQA 1503

Query: 253  TWEDAAHIYAQFPDFYP*GQGSLNGRGNVMIL 158
            TWED   +  +FP+    GQ  + G G V  L
Sbjct: 1504 TWEDLEDLKTRFPNALAWGQAKIQGEGIVRCL 1535



 Score =  360 bits (924), Expect(2) = 0.0
 Identities = 179/317 (56%), Positives = 233/317 (73%), Gaps = 1/317 (0%)
 Frame = -1

Query: 2799 VIQPSHSPFAAPILLVKKKDGTWRFCVDYRKLNDITVKDKFSIPLIEELLYELNGSMVFS 2620
            VIQ S SPF++P +LVKKKDGTWR  +DYR+LN+ITVK K+ +P+IEELL EL G+  F+
Sbjct: 650  VIQHSQSPFSSPAILVKKKDGTWRLVIDYRQLNNITVKTKYPVPVIEELLDELTGAKWFT 709

Query: 2619 KIDLR*GYYQIRVYAPDIHKTDFRTHQGHYEFRVMSFGLTNDPATFQALMNEVFQPYLRK 2440
            K+DLR GY+QIR+   +  KT F+TH GHYE++VMSFGLT  PATF   MN+  +  LRK
Sbjct: 710  KLDLRSGYHQIRMAEGEEPKTAFQTHSGHYEYKVMSFGLTGAPATFLKAMNDTLKSVLRK 769

Query: 2439 FVLVFFDDILVYSPSLEAHLEYLQLILSLLRKHSLFDKLSKCAFAQPQLEYLGYIITASG 2260
            F LVFFDDIL+YSP+L +HLE+L+ +L LLR H    KLSKC+F Q QL YLG+II  +G
Sbjct: 770  FALVFFDDILIYSPTLSSHLEHLKQVLQLLRNHHWKVKLSKCSFGQQQLSYLGHIIGVNG 829

Query: 2259 VGADPEKVASMVNWPQPQTIKQLRGFLGLTCYYRKFIKDYGNIYMLLTDMLKKDY-FSWT 2083
            V  DP KV  +++W  P + K+LRGFLGL  YYRKF+K++G I   LT +L+K   + WT
Sbjct: 830  VATDPSKVQDVLDWAVPVSTKKLRGFLGLAGYYRKFVKNFGIISKPLTQLLRKGVPYVWT 889

Query: 2082 DDTTHAFSSIKHAMTTAPVLALPDFSQPFILETDACSRGVGAVLMQYDKPIAFFSKPLGP 1903
             +T +AF ++K A+ +APVL+LPDF + F +ETDA   G+GAVL Q   PIA+ SK LGP
Sbjct: 890  TETDNAFHTLKQALASAPVLSLPDFQKTFTVETDASDCGIGAVLSQDKHPIAYVSKALGP 949

Query: 1902 KALSLSTYEKEFSAIVM 1852
            +   LSTYEKE  AI++
Sbjct: 950  RTRGLSTYEKECMAILL 966