BLASTX nr result

ID: Papaver31_contig00041153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00041153
         (800 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008377787.1| PREDICTED: uncharacterized protein LOC103440...    59   5e-06
ref|XP_008359871.1| PREDICTED: F-box protein At3g07870-like [Mal...    58   7e-06

>ref|XP_008377787.1| PREDICTED: uncharacterized protein LOC103440863 [Malus domestica]
          Length = 493

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
 Frame = +2

Query: 8   SCNGLVCLSVPYVKPGFPCGFTDPIYICNPVTREEWNLP----RCNLIKSTYNSDGAIIT 175
           SCNG +CLS P           DP+ +CNP+T E  +LP    +C   K +Y+       
Sbjct: 182 SCNGFLCLSSPXXN--------DPVVVCNPITGEFIHLPESASKCEKEKESYDC------ 227

Query: 176 SGFCYVPSTNQYKVVRICYHLNEVIGYLQMYTLGVDETWE 295
            GF + P TN+YKV+RI           +++TLG D +W+
Sbjct: 228 -GFGFNPKTNEYKVLRIFQQREPYTKVAEVHTLGTD-SWK 265


>ref|XP_008359871.1| PREDICTED: F-box protein At3g07870-like [Malus domestica]
          Length = 410

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
 Frame = +2

Query: 8   SCNGLVCLSVPYVKPGFPCGFTDPIYICNPVTREEWNLP----RCNLIKSTYNSDGAIIT 175
           SCNG +CLS P+          DP+ +CNP+T E  +LP    +C   K +Y+       
Sbjct: 102 SCNGFLCLSSPFSN--------DPVVVCNPITGEFIHLPESASKCEKEKESYD------- 146

Query: 176 SGFCYVPSTNQYKVVRICYHLNEVIGYLQMYTLGVDETWE 295
            GF + P TN+YKV+RI     +V    +++TLG D +W+
Sbjct: 147 CGFGFNPKTNEYKVLRIFQPYTKV---AEVHTLGTD-SWK 182


Top