BLASTX nr result
ID: Papaver31_contig00040584
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00040584
(905 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325262.2| DNA ligase IV family protein [Populus tricho... 109 3e-21
ref|XP_010273585.1| PREDICTED: putative DNA ligase 4 isoform X3 ... 107 1e-20
ref|XP_010273584.1| PREDICTED: DNA ligase 4 isoform X2 [Nelumbo ... 107 1e-20
ref|XP_010273583.1| PREDICTED: DNA ligase 4 isoform X1 [Nelumbo ... 107 1e-20
ref|XP_011094107.1| PREDICTED: DNA ligase 4 [Sesamum indicum] 92 4e-16
ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume] 92 4e-16
ref|XP_010111548.1| DNA ligase 4 [Morus notabilis] gi|587944758|... 90 2e-15
ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneid... 88 8e-15
dbj|BAF03051.1| DNA ligase IV [Populus nigra] 87 2e-14
ref|XP_011017671.1| PREDICTED: DNA ligase 4 isoform X2 [Populus ... 86 5e-14
ref|XP_010913736.1| PREDICTED: DNA ligase 4 [Elaeis guineensis] 80 2e-12
gb|KDO61940.1| hypothetical protein CISIN_1g0010821mg, partial [... 80 3e-12
ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Cit... 80 3e-12
ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citr... 80 3e-12
ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citr... 80 3e-12
ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [S... 80 3e-12
ref|XP_008781771.1| PREDICTED: DNA ligase 4 isoform X3 [Phoenix ... 79 5e-12
ref|XP_008781769.1| PREDICTED: DNA ligase 4 isoform X1 [Phoenix ... 79 5e-12
ref|XP_008668915.1| PREDICTED: putative DNA ligase 4 [Zea mays] 77 1e-11
ref|XP_008388689.1| PREDICTED: DNA ligase 4 [Malus domestica] 77 2e-11
>ref|XP_002325262.2| DNA ligase IV family protein [Populus trichocarpa]
gi|550318700|gb|EEF03827.2| DNA ligase IV family protein
[Populus trichocarpa]
Length = 1242
Score = 109 bits (272), Expect = 3e-21
Identities = 98/325 (30%), Positives = 149/325 (45%), Gaps = 27/325 (8%)
Frame = -1
Query: 899 QKLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEHAVKNVRTSAASEVVEKRK 720
QKL E+ YNLKP GLEESN + ++D+ K+ S + A+K+ + E RK
Sbjct: 909 QKLLEDTYNLKPSGLEESNCKEVLPSVTDSEAKEKGS---KAALKDSNKLGSLEKETTRK 965
Query: 719 RGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDDTS--------NKDA 564
RGRP +TK+G+ A QAR+TR + +PAK+ + ++S S DD + N++
Sbjct: 966 RGRPAGESTKKGKIGAGQARRTRARIVNKPAKISVEKSDESCSHDDKNEENDMSDGNEEI 1025
Query: 563 IGSKRGAQGVQGSI----TGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXXXS 396
G K + GS G Q+ RTR ++ K AK
Sbjct: 1026 HGGKPAGRPAGGSTKKGKIGAGQALRTRTRIANKPAK--ILEEKSEESCLHDDEIEENEM 1083
Query: 395 DRGFHEIH-----------ETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDY 249
G EIH +T T ED +++ ++KA+ + + LD D
Sbjct: 1084 SEGNEEIHGPVSKYNLDIQQTTTVEDSESSRRDKAKEETAEENRH-----EEWLDKAPDV 1138
Query: 248 QDSEKVTGHNEIYNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGV-KSEAYQSASGSE 72
+ SE+ Y + EK +K EV +DP+ A+L++MIPSLG+ K E G+E
Sbjct: 1139 EMSER-------YYDQVTEK---PEKLEVMVDPVHAILMDMIPSLGMKKGETTNPTIGNE 1188
Query: 71 VPLR---IDPSIQVKKTEASKPALE 6
PS+ +KK E + P L+
Sbjct: 1189 KQAEGPYAQPSLSMKKVENTTPTLD 1213
>ref|XP_010273585.1| PREDICTED: putative DNA ligase 4 isoform X3 [Nelumbo nucifera]
Length = 1099
Score = 107 bits (267), Expect = 1e-20
Identities = 99/299 (33%), Positives = 131/299 (43%), Gaps = 10/299 (3%)
Frame = -1
Query: 899 QKLDEEKYNLKPDGLEESNIEMSEHEISDTS----EKDGKSISEEHAVKNVRTSAASEVV 732
QKL E KY L+PD LE+ IE +I + EKD K + AV+++R S + E
Sbjct: 832 QKLQEGKYGLRPDSLEDLPIEQRISDIEENQNGHPEKDDKGSTNGPAVEHLRVSESPEKG 891
Query: 731 EKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDDTSNKDAIGSK 552
KRKRGRP L K R SQ R++R + RPAK+D+ E + S D+T + +
Sbjct: 892 AKRKRGRPALTKAKGARKGFSQTRRSRARLGNRPAKIDENESGSNDSCDETKKHEHFVTS 951
Query: 551 RGAQGVQG---SITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXXXSDRGFH 381
G++G G G SQ + + DR
Sbjct: 952 EGSKGTDGMDAMKNGTSQENESPEVL-----------------------------DRSL- 981
Query: 380 EIHET--ETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKVTGHNEIYN 207
I+ T E ED E E F Q ELDG +DSE G Y
Sbjct: 982 GINPTKWEATED------ENPEWFPKDQ--------RTELDGGIYTRDSENAQGSGNAY- 1026
Query: 206 SKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGV-KSEAYQSASGSEVPLRIDPSIQVKK 33
+EK D +K E+ +DP+QAMLL+MIPSLGV K E S + PL + VKK
Sbjct: 1027 ---KEKKDNLEKLEMMVDPVQAMLLDMIPSLGVNKIETADSVIEIKKPLEDPDAEPVKK 1082
>ref|XP_010273584.1| PREDICTED: DNA ligase 4 isoform X2 [Nelumbo nucifera]
Length = 1143
Score = 107 bits (267), Expect = 1e-20
Identities = 99/299 (33%), Positives = 131/299 (43%), Gaps = 10/299 (3%)
Frame = -1
Query: 899 QKLDEEKYNLKPDGLEESNIEMSEHEISDTS----EKDGKSISEEHAVKNVRTSAASEVV 732
QKL E KY L+PD LE+ IE +I + EKD K + AV+++R S + E
Sbjct: 876 QKLQEGKYGLRPDSLEDLPIEQRISDIEENQNGHPEKDDKGSTNGPAVEHLRVSESPEKG 935
Query: 731 EKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDDTSNKDAIGSK 552
KRKRGRP L K R SQ R++R + RPAK+D+ E + S D+T + +
Sbjct: 936 AKRKRGRPALTKAKGARKGFSQTRRSRARLGNRPAKIDENESGSNDSCDETKKHEHFVTS 995
Query: 551 RGAQGVQG---SITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXXXSDRGFH 381
G++G G G SQ + + DR
Sbjct: 996 EGSKGTDGMDAMKNGTSQENESPEVL-----------------------------DRSL- 1025
Query: 380 EIHET--ETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKVTGHNEIYN 207
I+ T E ED E E F Q ELDG +DSE G Y
Sbjct: 1026 GINPTKWEATED------ENPEWFPKDQ--------RTELDGGIYTRDSENAQGSGNAY- 1070
Query: 206 SKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGV-KSEAYQSASGSEVPLRIDPSIQVKK 33
+EK D +K E+ +DP+QAMLL+MIPSLGV K E S + PL + VKK
Sbjct: 1071 ---KEKKDNLEKLEMMVDPVQAMLLDMIPSLGVNKIETADSVIEIKKPLEDPDAEPVKK 1126
>ref|XP_010273583.1| PREDICTED: DNA ligase 4 isoform X1 [Nelumbo nucifera]
Length = 1168
Score = 107 bits (267), Expect = 1e-20
Identities = 99/299 (33%), Positives = 131/299 (43%), Gaps = 10/299 (3%)
Frame = -1
Query: 899 QKLDEEKYNLKPDGLEESNIEMSEHEISDTS----EKDGKSISEEHAVKNVRTSAASEVV 732
QKL E KY L+PD LE+ IE +I + EKD K + AV+++R S + E
Sbjct: 901 QKLQEGKYGLRPDSLEDLPIEQRISDIEENQNGHPEKDDKGSTNGPAVEHLRVSESPEKG 960
Query: 731 EKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDDTSNKDAIGSK 552
KRKRGRP L K R SQ R++R + RPAK+D+ E + S D+T + +
Sbjct: 961 AKRKRGRPALTKAKGARKGFSQTRRSRARLGNRPAKIDENESGSNDSCDETKKHEHFVTS 1020
Query: 551 RGAQGVQG---SITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXXXSDRGFH 381
G++G G G SQ + + DR
Sbjct: 1021 EGSKGTDGMDAMKNGTSQENESPEVL-----------------------------DRSL- 1050
Query: 380 EIHET--ETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKVTGHNEIYN 207
I+ T E ED E E F Q ELDG +DSE G Y
Sbjct: 1051 GINPTKWEATED------ENPEWFPKDQ--------RTELDGGIYTRDSENAQGSGNAY- 1095
Query: 206 SKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGV-KSEAYQSASGSEVPLRIDPSIQVKK 33
+EK D +K E+ +DP+QAMLL+MIPSLGV K E S + PL + VKK
Sbjct: 1096 ---KEKKDNLEKLEMMVDPVQAMLLDMIPSLGVNKIETADSVIEIKKPLEDPDAEPVKK 1151
>ref|XP_011094107.1| PREDICTED: DNA ligase 4 [Sesamum indicum]
Length = 1222
Score = 92.4 bits (228), Expect = 4e-16
Identities = 90/315 (28%), Positives = 135/315 (42%), Gaps = 24/315 (7%)
Frame = -1
Query: 905 EDQKLDEEKYNLKPDGLEES-----NIEMSEHEISDTSEKDGKSISEEHAVKNVR-TSAA 744
+DQKL EE Y+L+ G ES N + E + E K +S + V+N TS
Sbjct: 897 KDQKLSEESYSLRAQGFLESLAGDSNEDDLTREEYRSLEIGSKDVSSSYGVRNSNATSDK 956
Query: 743 SEVVE------KRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDD 582
+V KRKRGRP+ +T++G++V + R+TR + PAK+D+ E + ASSDD
Sbjct: 957 PRIVSLPNRDGKRKRGRPSGMSTRKGKSVVN--RRTRPRAGKNPAKIDENESDNGASSDD 1014
Query: 581 TSNKDAIG----------SKRGAQGVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXX 432
+ G SK + Q T +Q R AK+G + D
Sbjct: 1015 KEELEVGGKSDVGSEMLKSKGRSSFNQPKRTARAQIRNKPAKIGGNESDKDPSSEEQSME 1074
Query: 431 XXXXXXXXXXXS-DRGFHEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRN 255
D + E + KE +K++T EK + EL
Sbjct: 1075 QDFEVKRANNGPSDTANLHVPEFQKKEAEKDSTSEKGK--------------EAELGVEE 1120
Query: 254 DYQDSEKVTGHNEIYNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGS 75
Y+ +V NE+ + G +D+ E T+DP+QAMLL+M+P L K
Sbjct: 1121 RYKPGIRVDETNEVGSGYGGSTC-YNDRLEDTVDPVQAMLLDMVPILATKKVESAIPVSD 1179
Query: 74 EVPLR-IDPSIQVKK 33
EV R DP+ + +K
Sbjct: 1180 EVKTRHPDPAPEEEK 1194
>ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume]
Length = 1130
Score = 92.4 bits (228), Expect = 4e-16
Identities = 76/283 (26%), Positives = 123/283 (43%), Gaps = 17/283 (6%)
Frame = -1
Query: 902 DQKLDEEKYNLKPDGLEESNIEMSEHEI-----------------SDTSEKDGKSISEEH 774
DQ+L EE Y+LKP+GLEE +IE +H++ S + ++GK I +
Sbjct: 866 DQRLQEETYSLKPNGLEECSIEEWKHDMDLEEAPSVVDTLQINNSSSSPNQEGKEIGGKE 925
Query: 773 AVKNVRTSAASEVVEKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSA 594
A +N R A+ E KRKRGRP L + +G+T +QAR+TRV+ +PAK+ E ++
Sbjct: 926 APENYRILASPERESKRKRGRPALTSMNKGKTGVNQARRTRVRIGRKPAKISGNESDEGG 985
Query: 593 SSDDTSNKDAIGSKRGAQGVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXX 414
S D+T + + + G+ + Q
Sbjct: 986 SHDNTLLVEEVDKEERKHGMMSDASLDIQENEA--------------------------- 1018
Query: 413 XXXXXSDRGFHEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEK 234
I ++E+ + D +E AE D+ ++ I +++ + + +DS K
Sbjct: 1019 ------------IRDSESLQRDNAAVQEVAE--DIRFEDHSYQIPDVKMIEKCNIEDSGK 1064
Query: 233 VTGHNEIYNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVK 105
+K EV DP+QAML +MIPSL +K
Sbjct: 1065 ------------------PEKLEVMADPVQAMLFDMIPSLAMK 1089
>ref|XP_010111548.1| DNA ligase 4 [Morus notabilis] gi|587944758|gb|EXC31206.1| DNA ligase
4 [Morus notabilis]
Length = 821
Score = 90.1 bits (222), Expect = 2e-15
Identities = 88/321 (27%), Positives = 140/321 (43%), Gaps = 27/321 (8%)
Frame = -1
Query: 902 DQKLDEEKYNLKP--------DGLEESNIEMS-------EHEISDTSEKDGKSISEEHAV 768
+Q+L EE Y+LKP D ++ ++E+S + +S + K+G + A
Sbjct: 498 EQRLPEETYSLKPLLEQLKIEDWNQDMDLEVSSDLDIVKKQNVSLSPSKEGNNRKGSEAP 557
Query: 767 KNVRTSAASEVVEKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASS 588
++ EV KRKRGRP GN RG+ VA AR+TR + ++ AK+ E + S S
Sbjct: 558 ESPGIRPVLEVGSKRKRGRPA-GN--RGKAVAKPARKTRARVGSKAAKISGNESDDSVSD 614
Query: 587 DDTSNKDA---IGSKRG-----AQGVQGSITGLSQSRRTRAKMGAKHAK-SDXXXXXXXX 435
++ + K+ +G G + + G Q RRTRA++G K AK S
Sbjct: 615 EENTTKEESKQLGESHGNIVEEQSQISKAKGGAKQVRRTRARIGKKPAKISGNESEDNAS 674
Query: 434 XXXXXXXXXXXXSDRGFHEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSME--LDG 261
HE + T + + T EK+E + + G G++ +
Sbjct: 675 QDESTFKEPANKQIEDIHERIDIGTSQTRETKTIEKSESSEKGNADKQEGEGNIRYWFNK 734
Query: 260 RNDYQDSEKVTGHNEIYNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSAS 81
+ + SEK N EK+ E+ DP+ AMLL+MIP LG + + S
Sbjct: 735 VPENETSEKQNSENSQPPPPPPEKL------ELMTDPVHAMLLDMIPRLGKEKVEITNTS 788
Query: 80 GSEVPLRIDPSI-QVKKTEAS 21
+ +DP+ Q KK + S
Sbjct: 789 TEDKKPAVDPNAPQPKKKKVS 809
>ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneideri]
Length = 1163
Score = 88.2 bits (217), Expect = 8e-15
Identities = 80/297 (26%), Positives = 125/297 (42%), Gaps = 18/297 (6%)
Frame = -1
Query: 902 DQKLDEEKYNLKPDGLEESNIEMSEHEIS--------DTSE--------KDGKSISEEHA 771
DQ+L EE Y+LKP+GLEESN+E +H++ D E + GK I + A
Sbjct: 899 DQRLQEETYSLKPNGLEESNVEEWKHDMGLEEAPCDVDAVENHNSCFPNRKGKEIEVKAA 958
Query: 770 VKNVRTSAASEVVEKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSAS 591
+N + + E KRKRGRP + +G++ +QAR+ R + +PAK+ E E+ S
Sbjct: 959 PENCKMLDSPERGSKRKRGRPARTSLNKGKSTVNQARRARARIGRKPAKISGNESEEGGS 1018
Query: 590 SDDTSNKDAIGSKRGAQGVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXX 411
D TS + + G G +
Sbjct: 1019 HDSTSLGEEVDLGERIHGTVGQES------------------------------------ 1042
Query: 410 XXXXSDRGFHEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSE-K 234
+I E E +D ++ + KA DV++ I Y+ +E K
Sbjct: 1043 ---------IDIQENEAMKDSESLQRGKAVEQDVAEDIRI----------EEPYKIAEIK 1083
Query: 233 VTGHNEIYNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLG-VKSEAYQSASGSEVP 66
+ + SK E++ E T DP++AML +MIPSLG K+E +++ E P
Sbjct: 1084 MKEKQNVQESKKREEL------ESTADPVEAMLFDMIPSLGRKKAETTYTSTRDEKP 1134
>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
Length = 1319
Score = 87.0 bits (214), Expect = 2e-14
Identities = 98/385 (25%), Positives = 157/385 (40%), Gaps = 87/385 (22%)
Frame = -1
Query: 899 QKLDEEKYNLKPDGLEESN-------IEMSE----------HEISDTSEKDGKSISEEHA 771
QKL E+ YNLKP GLEESN ++M E + ++ + K + A
Sbjct: 909 QKLLEDTYNLKPSGLEESNCKEIVCDLDMEEATPISDGAKNERLPSVTDSEAKEKGSKAA 968
Query: 770 VKNVRTSAASEVVEKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSAS 591
+K+ + E RKRGRP G+TK+G+ A QA++TR + +PAK+ + ++S S
Sbjct: 969 LKDSNKLGSLEKETTRKRGRPAGGSTKKGKIGAGQAQRTRARIVNKPAKISVEKSDESCS 1028
Query: 590 SDDTS--------NKDAIGSKRGAQGVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXX 435
DD + N++ G K + G +RRTRA + K AK+
Sbjct: 1029 QDDKNEENDMSDGNEEIHGGKPAGGITKKRKMGAGLARRTRACIVNKPAKTS--EEKPDE 1086
Query: 434 XXXXXXXXXXXXSDRGFHEIHE--------------------------------TETKED 351
G +EIH E K +
Sbjct: 1087 SCCHDEKSEENEMSEGSYEIHGGRPAGGSTRKGKIGAGQARRTRTRIANKPAKILEEKSE 1146
Query: 350 DKNNTKEKAEVFDVSQGN-NINGIGS---MELDGRNDYQDSE------------KVTGHN 219
+ ++ E ++S+GN I+G S +++ +DSE + H
Sbjct: 1147 ESCLHDDEIEENEMSEGNEEIHGPDSKYNLDIQQTKMVEDSESSRRGKAKEATAEENRHE 1206
Query: 218 EIYNS------KGEEKIDVSDKP---EVTLDPLQAMLLNMIPSLGVK-----SEAYQSAS 81
E + G V++KP EV +DP+ A+L++MIPSLG+K + +
Sbjct: 1207 EWLDKAPDVEMSGRYYDQVTEKPEKLEVMVDPVHAILMDMIPSLGMKKGETTNPTIDNEK 1266
Query: 80 GSEVPLRIDPSIQVKKTEASKPALE 6
+E P S+ +KK E + P L+
Sbjct: 1267 QAEGPY-AQSSLSMKKVENTTPTLD 1290
>ref|XP_011017671.1| PREDICTED: DNA ligase 4 isoform X2 [Populus euphratica]
Length = 1197
Score = 85.5 bits (210), Expect = 5e-14
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 22/320 (6%)
Frame = -1
Query: 899 QKLDEEKYNLKPDGLEESN-------IEMSEHE-ISDTSEKD---------GKSISEEHA 771
QKL E+ YNLKP GLEESN ++M E ISD +E + K + A
Sbjct: 909 QKLPEDTYNLKPSGLEESNCKEVVCDLDMEEATPISDGAENERLPSVTDSEAKEKGSKAA 968
Query: 770 VKNVRTSAASEVVEKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSAS 591
+K+ + E RKRGRP G+TK+G+ A QAR+TR + +PAK+ + E+S
Sbjct: 969 LKDSNKLGSLEKETTRKRGRPAGGSTKKGKIGAGQARRTRTRIANKPAKILEERSEESCL 1028
Query: 590 SDDTSNKDAIGSKRGAQGVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXX 411
DD ++ + + + + G ++ +
Sbjct: 1029 HDDEIEENEMNEEN--EEIHGPVSKYNL-------------------------------- 1054
Query: 410 XXXXSDRGFHEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKV 231
+I +T+ ED +++ + KA+ + + ++ D
Sbjct: 1055 ----------DIQQTKKVEDSESSRRGKAKEETAEENRD------------EEWLDKAPG 1092
Query: 230 TGHNEIYNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVK-----SEAYQSASGSEVP 66
E Y ++ EK +K EV +DP+ A+L++MIPSLG+K + + +E P
Sbjct: 1093 VEMRERYYNQVTEK---PEKLEVMVDPVHAILMDMIPSLGMKKGETTNPTIDNEKQAEGP 1149
Query: 65 LRIDPSIQVKKTEASKPALE 6
S+ +KK E + P L+
Sbjct: 1150 Y-AQSSLSMKKVENTTPTLD 1168
>ref|XP_010913736.1| PREDICTED: DNA ligase 4 [Elaeis guineensis]
Length = 1172
Score = 80.1 bits (196), Expect = 2e-12
Identities = 75/285 (26%), Positives = 117/285 (41%), Gaps = 7/285 (2%)
Frame = -1
Query: 899 QKLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEHAVKNVRTSAASEVVEKRK 720
+KL E+ YNLKPD EE I+ + IS + + +E+ V + + EK+K
Sbjct: 900 KKLHEDSYNLKPDTFEEIKIDERHNLISPVTTSN----AEKQCVSRLN------IGEKKK 949
Query: 719 RGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDDTSNKDAIGSKRGAQ 540
R RP + ++GRT R+TR + RPAK+D E E S SD+TS + S++ +
Sbjct: 950 RDRPMHADARKGRTGPKLTRRTRARIGNRPAKIDADEAENSDCSDETSMGKILKSRKESN 1009
Query: 539 -------GVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXXXSDRGFH 381
G++ + +S + A K +K D G
Sbjct: 1010 IDITESAGIKDQESFSDESSQRGALGSRKESKGDMEESEDIKYQAPHFSIQAAECHAGSQ 1069
Query: 380 EIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKVTGHNEIYNSK 201
+H T+ + + E FD Q ++ G+ K TG
Sbjct: 1070 NVHLTDCDKKSEAPEDITNERFDNVQTVHVTETGT-------------KGTG-------- 1108
Query: 200 GEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVP 66
+K E +DPL AMLL+MIPSL + + +GS +P
Sbjct: 1109 --------EKIEQIVDPLHAMLLDMIPSLSQNN----AETGSSIP 1141
>gb|KDO61940.1| hypothetical protein CISIN_1g0010821mg, partial [Citrus sinensis]
gi|641843039|gb|KDO61941.1| hypothetical protein
CISIN_1g0010821mg, partial [Citrus sinensis]
gi|641843040|gb|KDO61942.1| hypothetical protein
CISIN_1g0010821mg, partial [Citrus sinensis]
gi|641843041|gb|KDO61943.1| hypothetical protein
CISIN_1g0010821mg, partial [Citrus sinensis]
gi|641843042|gb|KDO61944.1| hypothetical protein
CISIN_1g0010821mg, partial [Citrus sinensis]
Length = 743
Score = 79.7 bits (195), Expect = 3e-12
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 17/308 (5%)
Frame = -1
Query: 905 EDQKLDEEKYNLKPDGLEESNIEMSEHEIS--------DTSEKDGKSISEEHAVKNVRTS 750
++QK +E +Y+LKP G++ES +E+ E ++ +TS+K S + K T
Sbjct: 483 KEQKSEEYEYSLKPTGMQESYLELCEEDLDMEEPSSTLETSDKQNVSSFPDGDGKQRGTR 542
Query: 749 AASEVVEKR----KRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDD 582
S KR KRGRP G+ K+ ++ + AR+ R R +P+K+ Q E ++S +SD+
Sbjct: 543 GVSPASPKREGKRKRGRPAGGSAKKRKSTVNLARRKRPHVRNKPSKIYQNESDESNASDE 602
Query: 581 TSNKDAIGSKRGAQGVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXX 402
T K+ I + +
Sbjct: 603 TEKKEEINREENHE---------------------------------------------- 616
Query: 401 XSDRGFHEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKVTGH 222
DR E+ + E E + N E E D + +++ + D+ ++
Sbjct: 617 --DR---EMDDEENLETRQTNVVEDLESLDRGK--------ALQQEVVKDFGKEKQTVRA 663
Query: 221 NEI-----YNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVPLRI 57
+I Y+SK E +DK +V D +QAMLL+MIPSLG+K+E + E
Sbjct: 664 PDIEMRERYHSKDSE---TTDKQQV--DAVQAMLLDMIPSLGMKNEKTTNPIPKEESSSA 718
Query: 56 DPSIQVKK 33
+PS + K
Sbjct: 719 EPSAEPTK 726
>ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Citrus sinensis]
gi|568840649|ref|XP_006474278.1| PREDICTED: DNA ligase
4-like isoform X2 [Citrus sinensis]
Length = 1174
Score = 79.7 bits (195), Expect = 3e-12
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 17/308 (5%)
Frame = -1
Query: 905 EDQKLDEEKYNLKPDGLEESNIEMSEHEIS--------DTSEKDGKSISEEHAVKNVRTS 750
++QK +E +Y+LKP G++ES +E+ E ++ +TS+K S + K T
Sbjct: 914 KEQKSEEYEYSLKPTGMQESYLELCEEDLDMEEPSSTLETSDKQNVSSFPDGDGKQRGTR 973
Query: 749 AASEVVEKR----KRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDD 582
S KR KRGRP G+ K+ ++ + AR+ R R +P+K+ Q E ++S +SD+
Sbjct: 974 GVSPASPKREGKRKRGRPAGGSAKKRKSTVNLARRKRPHVRNKPSKIYQNESDESNASDE 1033
Query: 581 TSNKDAIGSKRGAQGVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXX 402
T K+ I + +
Sbjct: 1034 TEKKEEINREENHE---------------------------------------------- 1047
Query: 401 XSDRGFHEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKVTGH 222
DR E+ + E E + N E E D + +++ + D+ ++
Sbjct: 1048 --DR---EMDDEENLETRQTNVVEDLESLDRGK--------ALQQEVVKDFGKEKQTVRA 1094
Query: 221 NEI-----YNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVPLRI 57
+I Y+SK E +DK +V D +QAMLL+MIPSLG+K+E + E
Sbjct: 1095 PDIEMRERYHSKDSE---TTDKQQV--DAVQAMLLDMIPSLGMKNEKTTNPIPKEESSSA 1149
Query: 56 DPSIQVKK 33
+PS + K
Sbjct: 1150 EPSAEPTK 1157
>ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
gi|568840651|ref|XP_006474279.1| PREDICTED: DNA ligase
4-like isoform X3 [Citrus sinensis]
gi|557556466|gb|ESR66480.1| hypothetical protein
CICLE_v10007283mg [Citrus clementina]
Length = 1159
Score = 79.7 bits (195), Expect = 3e-12
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 17/308 (5%)
Frame = -1
Query: 905 EDQKLDEEKYNLKPDGLEESNIEMSEHEIS--------DTSEKDGKSISEEHAVKNVRTS 750
++QK +E +Y+LKP G++ES +E+ E ++ +TS+K S + K T
Sbjct: 899 KEQKSEEYEYSLKPTGMQESYLELCEEDLDMEEPSSTLETSDKQNVSSFPDGDGKQRGTR 958
Query: 749 AASEVVEKR----KRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDD 582
S KR KRGRP G+ K+ ++ + AR+ R R +P+K+ Q E ++S +SD+
Sbjct: 959 GVSPASPKREGKRKRGRPAGGSAKKRKSTVNLARRKRPHVRNKPSKIYQNESDESNASDE 1018
Query: 581 TSNKDAIGSKRGAQGVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXX 402
T K+ I + +
Sbjct: 1019 TEKKEEINREENHE---------------------------------------------- 1032
Query: 401 XSDRGFHEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKVTGH 222
DR E+ + E E + N E E D + +++ + D+ ++
Sbjct: 1033 --DR---EMDDEENLETRQTNVVEDLESLDRGK--------ALQQEVVKDFGKEKQTVRA 1079
Query: 221 NEI-----YNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVPLRI 57
+I Y+SK E +DK +V D +QAMLL+MIPSLG+K+E + E
Sbjct: 1080 PDIEMRERYHSKDSE---TTDKQQV--DAVQAMLLDMIPSLGMKNEKTTNPIPKEESSSA 1134
Query: 56 DPSIQVKK 33
+PS + K
Sbjct: 1135 EPSAEPTK 1142
>ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
gi|557556465|gb|ESR66479.1| hypothetical protein
CICLE_v10007283mg [Citrus clementina]
Length = 824
Score = 79.7 bits (195), Expect = 3e-12
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 17/308 (5%)
Frame = -1
Query: 905 EDQKLDEEKYNLKPDGLEESNIEMSEHEIS--------DTSEKDGKSISEEHAVKNVRTS 750
++QK +E +Y+LKP G++ES +E+ E ++ +TS+K S + K T
Sbjct: 564 KEQKSEEYEYSLKPTGMQESYLELCEEDLDMEEPSSTLETSDKQNVSSFPDGDGKQRGTR 623
Query: 749 AASEVVEKR----KRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDD 582
S KR KRGRP G+ K+ ++ + AR+ R R +P+K+ Q E ++S +SD+
Sbjct: 624 GVSPASPKREGKRKRGRPAGGSAKKRKSTVNLARRKRPHVRNKPSKIYQNESDESNASDE 683
Query: 581 TSNKDAIGSKRGAQGVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXX 402
T K+ I + +
Sbjct: 684 TEKKEEINREENHE---------------------------------------------- 697
Query: 401 XSDRGFHEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKVTGH 222
DR E+ + E E + N E E D + +++ + D+ ++
Sbjct: 698 --DR---EMDDEENLETRQTNVVEDLESLDRGK--------ALQQEVVKDFGKEKQTVRA 744
Query: 221 NEI-----YNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVPLRI 57
+I Y+SK E +DK +V D +QAMLL+MIPSLG+K+E + E
Sbjct: 745 PDIEMRERYHSKDSE---TTDKQQV--DAVQAMLLDMIPSLGMKNEKTTNPIPKEESSSA 799
Query: 56 DPSIQVKK 33
+PS + K
Sbjct: 800 EPSAEPTK 807
>ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [Sorghum bicolor]
gi|241939668|gb|EES12813.1| hypothetical protein
SORBIDRAFT_06g027820 [Sorghum bicolor]
Length = 1164
Score = 79.7 bits (195), Expect = 3e-12
Identities = 86/297 (28%), Positives = 118/297 (39%), Gaps = 17/297 (5%)
Frame = -1
Query: 905 EDQKLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEHAVKNVRTSAASEVVEK 726
+ KL E Y+LKPD LEE IE SE + K EEH + V S A V
Sbjct: 845 KQMKLSETAYSLKPDTLEELEIERSEENVQPPDHK-----LEEH--REVERSHAKNV--P 895
Query: 725 RKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKL-DQTEPEKSASSD--DTSNKDAIGS 555
RKR RPT +++ R R+ R + + AK+ D E E+S S+ D N D +
Sbjct: 896 RKRTRPT--SSRTARAAPRPVRRMRPRRGNQKAKIGDDVESEESGPSECQDDQNLDTDDT 953
Query: 554 KRGAQGVQGSITGL-----SQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXXXSDR 390
+ +G+ GL +RRTRA G +H K D D
Sbjct: 954 SKIEEGITSKKKGLPPPASKPARRTRAARGNQHTKID---------------------DG 992
Query: 389 GFHEIHETETKEDDKNNTKEKAEVFDVSQ---------GNNINGIGSMELDGRNDYQDSE 237
G E ET +DD+ + +V G + +G E G E
Sbjct: 993 GSEESGPCETGQDDQKLDTDYISNMEVDNSDKDCGPPPGAQLFTLGEQEAKGVKLNTVEE 1052
Query: 236 KVTGHNEIYNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVP 66
K + + DK E DPL AMLL+M+P LG K + AS + +P
Sbjct: 1053 KPDSPFQRTTAAEAMSSAPGDKIEQMADPLHAMLLDMLPLLGKKGT--EDASRAPLP 1107
>ref|XP_008781771.1| PREDICTED: DNA ligase 4 isoform X3 [Phoenix dactylifera]
Length = 1163
Score = 79.0 bits (193), Expect = 5e-12
Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 8/286 (2%)
Frame = -1
Query: 899 QKLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEHAVKNVRTSAASEVV-EKR 723
+KL E+ YNLKPD LEE I+ S H + +S + + S + ++ EKR
Sbjct: 900 KKLHEDSYNLKPDTLEEIKIDESRHNL----------VSPVTTINTEKQSVSRLIIGEKR 949
Query: 722 KRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDDTSNKDAIGSKRGA 543
KR RPT +T++GRT R R + R AK+D E E S SSD+TS + S+ +
Sbjct: 950 KRDRPTHADTRKGRTGPRHKRTMRARIGNRLAKIDADEAENSDSSDETSMGKTLKSREES 1009
Query: 542 Q-------GVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXXXSDRGF 384
+ GV+ + S + A K ++ D +
Sbjct: 1010 EIDITESVGVKNQESFSDGSCQREALGSRKESQGDMEESEDIKYQAPHFSIQVAE----Y 1065
Query: 383 HEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKVTGHNEIYNS 204
H+ + T ED N + + +V++ N K TG
Sbjct: 1066 HQGSQIVTPEDRTNERFDNVQTLNVTETGN-------------------KGTG------- 1099
Query: 203 KGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVP 66
+K E +DPL+A+LL+MIPSL + +GS +P
Sbjct: 1100 ---------EKLEQMVDPLRAILLDMIPSLSQNN----VETGSSIP 1132
>ref|XP_008781769.1| PREDICTED: DNA ligase 4 isoform X1 [Phoenix dactylifera]
Length = 1169
Score = 79.0 bits (193), Expect = 5e-12
Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 8/286 (2%)
Frame = -1
Query: 899 QKLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEHAVKNVRTSAASEVV-EKR 723
+KL E+ YNLKPD LEE I+ S H + +S + + S + ++ EKR
Sbjct: 906 KKLHEDSYNLKPDTLEEIKIDESRHNL----------VSPVTTINTEKQSVSRLIIGEKR 955
Query: 722 KRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDDTSNKDAIGSKRGA 543
KR RPT +T++GRT R R + R AK+D E E S SSD+TS + S+ +
Sbjct: 956 KRDRPTHADTRKGRTGPRHKRTMRARIGNRLAKIDADEAENSDSSDETSMGKTLKSREES 1015
Query: 542 Q-------GVQGSITGLSQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXXXSDRGF 384
+ GV+ + S + A K ++ D +
Sbjct: 1016 EIDITESVGVKNQESFSDGSCQREALGSRKESQGDMEESEDIKYQAPHFSIQVAE----Y 1071
Query: 383 HEIHETETKEDDKNNTKEKAEVFDVSQGNNINGIGSMELDGRNDYQDSEKVTGHNEIYNS 204
H+ + T ED N + + +V++ N K TG
Sbjct: 1072 HQGSQIVTPEDRTNERFDNVQTLNVTETGN-------------------KGTG------- 1105
Query: 203 KGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVP 66
+K E +DPL+A+LL+MIPSL + +GS +P
Sbjct: 1106 ---------EKLEQMVDPLRAILLDMIPSLSQNN----VETGSSIP 1138
>ref|XP_008668915.1| PREDICTED: putative DNA ligase 4 [Zea mays]
Length = 439
Score = 77.4 bits (189), Expect = 1e-11
Identities = 93/319 (29%), Positives = 129/319 (40%), Gaps = 20/319 (6%)
Frame = -1
Query: 905 EDQKLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEHAVKNVRTSAASEVVEK 726
+ KL E Y+LKPD LEE I+ SE + K EEH K V S A +
Sbjct: 128 KQMKLSETAYSLKPDTLEELEIKRSEENVQPPEHK-----FEEH--KEVERSHAENM--P 178
Query: 725 RKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSD--DTSNKDAIGSK 552
RKR RPT T R A R+ R + + AK+ E E+S S+ D N D +
Sbjct: 179 RKRSRPTSSRTARAAPRA--VRRIRPRRGNQKAKIGDVESEESGPSECQDDENLDTDDTS 236
Query: 551 RGAQGVQGSITGL-----SQSRRTRAKMGAKHAKSDXXXXXXXXXXXXXXXXXXXXSDRG 387
+ +G+ GL + RT A G +H K D D G
Sbjct: 237 KIEEGITNKNKGLPAPASKPAWRTGATKGNQHTKID---------------------DSG 275
Query: 386 FHEIHETETKEDDKNNTKEKAEVFDVSQ------GNNINGIGSMELDG-----RNDYQDS 240
E ET +DD + K EV ++ G + +G E+ G + QDS
Sbjct: 276 SEESGPCETAQDDYIS---KMEVDNIDNDRGPPPGAQLFTLGEQEVKGVKLNTVEEKQDS 332
Query: 239 --EKVTGHNEIYNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVP 66
++ T + ++ GE K E DPL AMLL+M+P LG K ++ S+ P
Sbjct: 333 PFQRTTAAEAMSSTPGE-------KIEQMADPLHAMLLDMLPLLGQK----RTEDTSKAP 381
Query: 65 LRIDPSIQVKKTEASKPAL 9
L K E PA+
Sbjct: 382 L--------AKAEKDPPAI 392
>ref|XP_008388689.1| PREDICTED: DNA ligase 4 [Malus domestica]
Length = 1075
Score = 77.0 bits (188), Expect = 2e-11
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Frame = -1
Query: 902 DQKLDEEKYNLKPDGLEESNIEMSEHEI----------------SDTSEKDGKSISEEHA 771
DQ+L EE Y+LKP GLEESN+E +H++ S + GK I + A
Sbjct: 898 DQRLQEETYSLKPYGLEESNVEEWKHDMGLEEAPCDVDAVENHSSSFPNRKGKEIEVKAA 957
Query: 770 VKNVRTSAASEVVEKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSAS 591
+N + + E KRKRGRP + +G++ +QAR+ + +PAK+ E E+S S
Sbjct: 958 PENCKILDSPERGSKRKRGRPARTSLNKGKSTVNQARRAWARIGRKPAKISGNESEESGS 1017
Query: 590 SDDTSNKDAIGSKRGAQGVQG 528
D+TS + + G G
Sbjct: 1018 HDNTSLGEEVDLGERIHGTVG 1038