BLASTX nr result
ID: Papaver31_contig00040546
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver31_contig00040546 (1737 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 726 0.0 ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 708 0.0 ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 708 0.0 ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 692 0.0 ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 691 0.0 ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 691 0.0 ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 691 0.0 gb|KDO72326.1| hypothetical protein CISIN_1g036741mg [Citrus sin... 691 0.0 ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 690 0.0 ref|XP_009373754.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 677 0.0 ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 676 0.0 ref|XP_008230318.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 671 0.0 ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 671 0.0 ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 667 0.0 ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun... 667 0.0 ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 663 0.0 ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 660 0.0 ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic... 660 0.0 dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 660 0.0 ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 660 0.0 >ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like [Nelumbo nucifera] Length = 1031 Score = 726 bits (1874), Expect = 0.0 Identities = 373/611 (61%), Positives = 449/611 (73%), Gaps = 43/611 (7%) Frame = -3 Query: 1705 SISMWRNIAKRAVSSRK--------------LMKCLEDSIFKVNLKPLELNP-------- 1592 S +MWR+IA+RA ++ M +DSI +P EL Sbjct: 37 STAMWRHIARRASLTKVRLSRDSSSILRTFGFMGFSQDSILNDTTRPFELKSSMSFRFSE 96 Query: 1591 --FHQNGEV-----NVIRKF--CYRCLGDTSVSFSGNLRHPKGYASVAEAICTTDTEEDI 1439 F +NGE+ + R C+R +S HPKGYASVAEA+C+ D EED+ Sbjct: 97 RSFLRNGELPSKEDELGRPILGCFR----NPISPPRLSNHPKGYASVAEAVCSMDAEEDL 152 Query: 1438 SVMDANQG-----------EFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAK 1292 S +D Q E + +K+ K+V G+G +Y LL+RRQ+KIETEAWEQAAK Sbjct: 153 SAIDEIQELLEEMGKEEKKELELRDQKQIKLVGGMGQGKYLLLRRRQVKIETEAWEQAAK 212 Query: 1291 EYKELLADMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPYFDQLP 1115 EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLRD I +EQELCR+G + YAPYFDQLP Sbjct: 213 EYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRTAYAPYFDQLP 272 Query: 1114 AEMMAVITMHKLMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKG 935 AEMM+VITMHKLMG M+ +HG+ +VVQAACQIGEAIE EVRIH +LEKTRKK K Sbjct: 273 AEMMSVITMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIHKFLEKTRKKTD--KD 330 Query: 934 KSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSR 755 K +G E DP +Q RLR VR I+KGQ D+ KPWGQ+A AKVGSR Sbjct: 331 KKADGGESDPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQ--DDSKPWGQDAQAKVGSR 388 Query: 754 LIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGL 575 LIELL+Q+AYIQPPVDQL+DGPPDIRPAF+HS+KT+ ++ SR++GVIECDPL+ +GL Sbjct: 389 LIELLMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYGVIECDPLVRKGL 448 Query: 574 EKTAKHMVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRV 395 E+TA+HMVIPYMPMLVPP NW YDKGA+LFLPSYVMRTHG++QQR VK P KQ++ V Sbjct: 449 ERTARHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPRKQLEPV 508 Query: 394 FDALNTLGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKW 215 F+AL+TLGNTKWRVNK++L +VDR+WASGG+ A LVDR DV +PE+P+TEDEAE++ WKW Sbjct: 509 FEALDTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIKKWKW 568 Query: 214 KIKNAKKENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSD 35 K+K AKKEN+ERH+ RCD+ELKLAVA +M EDGF+YPHNLDFRGRAYPMHPYLNHLGSD Sbjct: 569 KVKAAKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSD 628 Query: 34 LCRGILEFAEG 2 LCRGILEFAEG Sbjct: 629 LCRGILEFAEG 639 >ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like isoform X2 [Nelumbo nucifera] Length = 942 Score = 708 bits (1828), Expect = 0.0 Identities = 364/606 (60%), Positives = 442/606 (72%), Gaps = 41/606 (6%) Frame = -3 Query: 1696 MWRNIAKRAVS-------SRKLMKCL------EDSIFKVNLKPLELNP----------FH 1586 MWRNI K+A S S +++ + +F + E F Sbjct: 1 MWRNIVKQACSTNFFSRDSSSMLRTFGVVGYSQYPVFHDKARQFEFKSSINAGFSESCFL 60 Query: 1585 QNGE-------VNVIRKFCYRCLGDTSVSFSGNLRHPKGYASVAEAICTTDTEEDISVMD 1427 +NGE + ++ C+R S+ S HPKGYASVAE + +TD EED+SV+D Sbjct: 61 RNGESPSKEDDLGILSFGCFR----NSMGLSRFSNHPKGYASVAEVLSSTDAEEDVSVVD 116 Query: 1426 ANQG----------EFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKEL 1277 Q E + +K+ K+V G+G +Y LL+RRQ+KIETEAWEQAAKEYKEL Sbjct: 117 EIQELLEEMSKEEKELEFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYKEL 176 Query: 1276 LADMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPYFDQLPAEMMA 1100 L DMCEQKLAPNLPYMKSLFLGWFEPLRD IA+EQELCR+G +A YAPYFDQLPAEMM+ Sbjct: 177 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYAPYFDQLPAEMMS 236 Query: 1099 VITMHKLMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEG 920 VITMHKL+G M+ +HG+A+VVQAAC IG+AIE EVRI+ +LEKT+KK K K EG Sbjct: 237 VITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKKKTD--KDKKAEG 294 Query: 919 DEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELL 740 E DP +Q RLR VR I+K Q D+ KPWGQ+A AKVGS LIELL Sbjct: 295 GESDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQ--DDSKPWGQDAQAKVGSHLIELL 352 Query: 739 IQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAK 560 +Q+AYIQ P DQL+DGPPDIRPAF+H++KTI +S SR++G+IECDPL+ +GLE+TA+ Sbjct: 353 MQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVRKGLERTAR 412 Query: 559 HMVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALN 380 HMVIPYMPMLVPP NW YDKGA+LFLPSYVMRTHG++QQR VK T KQ++ +F+AL+ Sbjct: 413 HMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQLEPIFEALD 472 Query: 379 TLGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNA 200 TLGNTKWR+NK++L +VDR+WASGG+ A LVDR DV LPE+PETEDEAEL+ WKWK+K Sbjct: 473 TLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKKWKWKVKAV 532 Query: 199 KKENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 20 KKEN+ERH+ RCD ELKLAVA +M E+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGI Sbjct: 533 KKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 592 Query: 19 LEFAEG 2 LEFAEG Sbjct: 593 LEFAEG 598 >ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like isoform X1 [Nelumbo nucifera] Length = 990 Score = 708 bits (1828), Expect = 0.0 Identities = 364/606 (60%), Positives = 442/606 (72%), Gaps = 41/606 (6%) Frame = -3 Query: 1696 MWRNIAKRAVS-------SRKLMKCL------EDSIFKVNLKPLELNP----------FH 1586 MWRNI K+A S S +++ + +F + E F Sbjct: 1 MWRNIVKQACSTNFFSRDSSSMLRTFGVVGYSQYPVFHDKARQFEFKSSINAGFSESCFL 60 Query: 1585 QNGE-------VNVIRKFCYRCLGDTSVSFSGNLRHPKGYASVAEAICTTDTEEDISVMD 1427 +NGE + ++ C+R S+ S HPKGYASVAE + +TD EED+SV+D Sbjct: 61 RNGESPSKEDDLGILSFGCFR----NSMGLSRFSNHPKGYASVAEVLSSTDAEEDVSVVD 116 Query: 1426 ANQG----------EFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKEL 1277 Q E + +K+ K+V G+G +Y LL+RRQ+KIETEAWEQAAKEYKEL Sbjct: 117 EIQELLEEMSKEEKELEFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYKEL 176 Query: 1276 LADMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPYFDQLPAEMMA 1100 L DMCEQKLAPNLPYMKSLFLGWFEPLRD IA+EQELCR+G +A YAPYFDQLPAEMM+ Sbjct: 177 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYAPYFDQLPAEMMS 236 Query: 1099 VITMHKLMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEG 920 VITMHKL+G M+ +HG+A+VVQAAC IG+AIE EVRI+ +LEKT+KK K K EG Sbjct: 237 VITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKKKTD--KDKKAEG 294 Query: 919 DEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELL 740 E DP +Q RLR VR I+K Q D+ KPWGQ+A AKVGS LIELL Sbjct: 295 GESDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQ--DDSKPWGQDAQAKVGSHLIELL 352 Query: 739 IQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAK 560 +Q+AYIQ P DQL+DGPPDIRPAF+H++KTI +S SR++G+IECDPL+ +GLE+TA+ Sbjct: 353 MQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVRKGLERTAR 412 Query: 559 HMVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALN 380 HMVIPYMPMLVPP NW YDKGA+LFLPSYVMRTHG++QQR VK T KQ++ +F+AL+ Sbjct: 413 HMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQLEPIFEALD 472 Query: 379 TLGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNA 200 TLGNTKWR+NK++L +VDR+WASGG+ A LVDR DV LPE+PETEDEAEL+ WKWK+K Sbjct: 473 TLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKKWKWKVKAV 532 Query: 199 KKENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 20 KKEN+ERH+ RCD ELKLAVA +M E+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGI Sbjct: 533 KKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 592 Query: 19 LEFAEG 2 LEFAEG Sbjct: 593 LEFAEG 598 >ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Citrus sinensis] Length = 1026 Score = 692 bits (1785), Expect = 0.0 Identities = 353/596 (59%), Positives = 437/596 (73%), Gaps = 26/596 (4%) Frame = -3 Query: 1711 KESISMWRNIAKRAVS---------SRKLMKCLEDSIF--KVNLKPLELNP--FHQNGEV 1571 K S MWRN+AK+A+S + + +DSI KV L++ P H+ G Sbjct: 42 KISSVMWRNVAKQAISLHLKKPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEVGSG 101 Query: 1570 NVIRKFCYR-CLGDTS--VSFSGNLRHPKGYASVAEAICTTDTEEDISVMDANQGEFQHE 1400 + + +G TS V + N P+GYA+VAEA+ +TD EED+S+++ Q E E Sbjct: 102 RIGEILNHEDYMGRTSFGVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQ-ELLQE 160 Query: 1399 QEKEP---------KIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLADMCEQKLA 1247 +KE ++ G+G+ +Y +LK RQ+KIETEAWE+AA EY+ELL DMCEQKLA Sbjct: 161 MKKEQQSGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLA 220 Query: 1246 PNLPYMKSLFLGWFEPLRDSIASEQELCRQGT-KANYAPYFDQLPAEMMAVITMHKLMGF 1070 PNLPYMKSLFLGWFEPLRD+IA EQE CR K YAPYFDQLPA+MMAVITMHKLMG Sbjct: 221 PNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGL 280 Query: 1069 FMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGDEPDPEAIKQ 890 M+ +HG A+VVQAAC IG+AIEQEVRIH +LEKT+KK + +EGDE + +Q Sbjct: 281 LMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQ 340 Query: 889 ARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPV 710 +LR VR I+KGQ D+ KPWGQ+A AKVGSR+IELL Q+AYIQ P Sbjct: 341 EKLRKKVTDLIKKQKLPAVRRIVKGQ--DDFKPWGQDARAKVGSRVIELLTQTAYIQSPA 398 Query: 709 DQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPML 530 DQL+D PPDI PAF H+++T+ ++ S+K+GVIEC+PL+ +GLE+TA+HMVIPYMPML Sbjct: 399 DQLADAPPDIFPAFTHALRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPML 458 Query: 529 VPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNTLGNTKWRVN 350 VPP W YDKGAH FLPSYVMRTHG+KQQR VK TP KQ++ VF+AL+TLGNTKWRVN Sbjct: 459 VPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVN 518 Query: 349 KKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAKKENNERHAH 170 ++L ++DR+W+ GG+ A LVDR DV LPEKPETEDEA+LR W+WK++N KKEN ERH+ Sbjct: 519 NRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQ 578 Query: 169 RCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 2 RCD+ELKL+VA KM E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEG Sbjct: 579 RCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 634 >ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] gi|557533046|gb|ESR44229.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] Length = 928 Score = 691 bits (1783), Expect = 0.0 Identities = 353/599 (58%), Positives = 438/599 (73%), Gaps = 29/599 (4%) Frame = -3 Query: 1711 KESISMWRNIAKRAVS---------SRKLMKCLEDSIF--KVNLKPLELNP--FHQNGEV 1571 K S MWRN+AK+A+S + + +DSI KV L++ P H+ G Sbjct: 42 KISSVMWRNVAKQAISLHLKKPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEVGSG 101 Query: 1570 NVIRKFCYR-CLGDTS--VSFSGNLRHPKGYASVAEAICTTDTEEDISVMDANQG---EF 1409 + + +G TS V + N P+GYA+VAEA+ +TD EED+S+++ Q E Sbjct: 102 RIGEILNHEDYMGRTSFGVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQELLQEM 161 Query: 1408 QHEQEKEP---------KIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLADMCEQ 1256 + E+++E ++ G+G+ +Y +LK RQ+KIETEAWEQAA EY+ELL DMCEQ Sbjct: 162 KKEEQREGENGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQ 221 Query: 1255 KLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQGT-KANYAPYFDQLPAEMMAVITMHKL 1079 KLAPNLPYMKSLFLGWFEPLRD+IA EQE CR K YAPYFDQLPA+MMAVITMHKL Sbjct: 222 KLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKL 281 Query: 1078 MGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGDEPDPEA 899 MG M+ +HG A+VVQAAC IG+AIEQEVRIH +LEKT+KK + +EGDE + Sbjct: 282 MGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVT 341 Query: 898 IKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQ 719 +Q +LR VR I+KGQ D+ KPWGQ+A AKVGSR+IELL Q+AYIQ Sbjct: 342 TEQEKLRKKVTDLIKKQKLPAVRRIVKGQ--DDFKPWGQDARAKVGSRVIELLTQTAYIQ 399 Query: 718 PPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYM 539 P DQL D PPDI PAF H+++T+ ++ S+K+GVIEC+PL+ +GLE+TA+HMVIPYM Sbjct: 400 SPADQLVDAPPDIFPAFTHTLRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYM 459 Query: 538 PMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNTLGNTKW 359 PMLVPP W YDKGAH FLPSYVMRTHG+KQQR VK TP KQ++ VF+AL+TLGNTKW Sbjct: 460 PMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKW 519 Query: 358 RVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAKKENNER 179 RVN ++L ++DR+W+ GG+ A LVDR DV LPEKPETEDEA+LR W+WK++N KKEN ER Sbjct: 520 RVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRER 579 Query: 178 HAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 2 H+ RCD+ELKL+VA KM E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEG Sbjct: 580 HSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 638 >ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] gi|557533045|gb|ESR44228.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] Length = 1030 Score = 691 bits (1783), Expect = 0.0 Identities = 353/599 (58%), Positives = 438/599 (73%), Gaps = 29/599 (4%) Frame = -3 Query: 1711 KESISMWRNIAKRAVS---------SRKLMKCLEDSIF--KVNLKPLELNP--FHQNGEV 1571 K S MWRN+AK+A+S + + +DSI KV L++ P H+ G Sbjct: 42 KISSVMWRNVAKQAISLHLKKPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEVGSG 101 Query: 1570 NVIRKFCYR-CLGDTS--VSFSGNLRHPKGYASVAEAICTTDTEEDISVMDANQG---EF 1409 + + +G TS V + N P+GYA+VAEA+ +TD EED+S+++ Q E Sbjct: 102 RIGEILNHEDYMGRTSFGVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQELLQEM 161 Query: 1408 QHEQEKEP---------KIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLADMCEQ 1256 + E+++E ++ G+G+ +Y +LK RQ+KIETEAWEQAA EY+ELL DMCEQ Sbjct: 162 KKEEQREGENGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQ 221 Query: 1255 KLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQGT-KANYAPYFDQLPAEMMAVITMHKL 1079 KLAPNLPYMKSLFLGWFEPLRD+IA EQE CR K YAPYFDQLPA+MMAVITMHKL Sbjct: 222 KLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKL 281 Query: 1078 MGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGDEPDPEA 899 MG M+ +HG A+VVQAAC IG+AIEQEVRIH +LEKT+KK + +EGDE + Sbjct: 282 MGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVT 341 Query: 898 IKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQ 719 +Q +LR VR I+KGQ D+ KPWGQ+A AKVGSR+IELL Q+AYIQ Sbjct: 342 TEQEKLRKKVTDLIKKQKLPAVRRIVKGQ--DDFKPWGQDARAKVGSRVIELLTQTAYIQ 399 Query: 718 PPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYM 539 P DQL D PPDI PAF H+++T+ ++ S+K+GVIEC+PL+ +GLE+TA+HMVIPYM Sbjct: 400 SPADQLVDAPPDIFPAFTHTLRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYM 459 Query: 538 PMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNTLGNTKW 359 PMLVPP W YDKGAH FLPSYVMRTHG+KQQR VK TP KQ++ VF+AL+TLGNTKW Sbjct: 460 PMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKW 519 Query: 358 RVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAKKENNER 179 RVN ++L ++DR+W+ GG+ A LVDR DV LPEKPETEDEA+LR W+WK++N KKEN ER Sbjct: 520 RVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRER 579 Query: 178 HAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 2 H+ RCD+ELKL+VA KM E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEG Sbjct: 580 HSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 638 >ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] gi|557533044|gb|ESR44227.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] Length = 933 Score = 691 bits (1783), Expect = 0.0 Identities = 353/599 (58%), Positives = 438/599 (73%), Gaps = 29/599 (4%) Frame = -3 Query: 1711 KESISMWRNIAKRAVS---------SRKLMKCLEDSIF--KVNLKPLELNP--FHQNGEV 1571 K S MWRN+AK+A+S + + +DSI KV L++ P H+ G Sbjct: 42 KISSVMWRNVAKQAISLHLKKPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEVGSG 101 Query: 1570 NVIRKFCYR-CLGDTS--VSFSGNLRHPKGYASVAEAICTTDTEEDISVMDANQG---EF 1409 + + +G TS V + N P+GYA+VAEA+ +TD EED+S+++ Q E Sbjct: 102 RIGEILNHEDYMGRTSFGVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQELLQEM 161 Query: 1408 QHEQEKEP---------KIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLADMCEQ 1256 + E+++E ++ G+G+ +Y +LK RQ+KIETEAWEQAA EY+ELL DMCEQ Sbjct: 162 KKEEQREGENGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQ 221 Query: 1255 KLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQGT-KANYAPYFDQLPAEMMAVITMHKL 1079 KLAPNLPYMKSLFLGWFEPLRD+IA EQE CR K YAPYFDQLPA+MMAVITMHKL Sbjct: 222 KLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKL 281 Query: 1078 MGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGDEPDPEA 899 MG M+ +HG A+VVQAAC IG+AIEQEVRIH +LEKT+KK + +EGDE + Sbjct: 282 MGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVT 341 Query: 898 IKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQ 719 +Q +LR VR I+KGQ D+ KPWGQ+A AKVGSR+IELL Q+AYIQ Sbjct: 342 TEQEKLRKKVTDLIKKQKLPAVRRIVKGQ--DDFKPWGQDARAKVGSRVIELLTQTAYIQ 399 Query: 718 PPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYM 539 P DQL D PPDI PAF H+++T+ ++ S+K+GVIEC+PL+ +GLE+TA+HMVIPYM Sbjct: 400 SPADQLVDAPPDIFPAFTHTLRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYM 459 Query: 538 PMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNTLGNTKW 359 PMLVPP W YDKGAH FLPSYVMRTHG+KQQR VK TP KQ++ VF+AL+TLGNTKW Sbjct: 460 PMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKW 519 Query: 358 RVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAKKENNER 179 RVN ++L ++DR+W+ GG+ A LVDR DV LPEKPETEDEA+LR W+WK++N KKEN ER Sbjct: 520 RVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRER 579 Query: 178 HAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 2 H+ RCD+ELKL+VA KM E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEG Sbjct: 580 HSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 638 >gb|KDO72326.1| hypothetical protein CISIN_1g036741mg [Citrus sinensis] Length = 1030 Score = 691 bits (1782), Expect = 0.0 Identities = 352/599 (58%), Positives = 439/599 (73%), Gaps = 29/599 (4%) Frame = -3 Query: 1711 KESISMWRNIAKRAVS---------SRKLMKCLEDSIF--KVNLKPLELNP--FHQNGEV 1571 K S MWRN+AK+A+S + + +DSI KV L++ P H+ G Sbjct: 42 KISSVMWRNVAKQAISLHLKKPFSRAYSFLGISQDSILRDKVKFVCLDMVPRGIHEVGSG 101 Query: 1570 NVIRKFCYR-CLGDTS--VSFSGNLRHPKGYASVAEAICTTDTEEDISVMDANQG---EF 1409 + + +G TS V + N P+GYA+VAEA+ +TD EED+S+++ Q E Sbjct: 102 RIGEILNHEDYMGRTSFGVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQELLQEM 161 Query: 1408 QHEQEKEP---------KIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLADMCEQ 1256 + E+++E ++ G+G+ +Y +LK RQ+KIETEAWE+AA EY+ELL DMCEQ Sbjct: 162 KKEEQREGENGSGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQ 221 Query: 1255 KLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQGT-KANYAPYFDQLPAEMMAVITMHKL 1079 KLAPNLPYMKSLFLGWFEPLRD+IA EQE CR K YAPYFDQLPA+MMAVITMHKL Sbjct: 222 KLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKL 281 Query: 1078 MGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGDEPDPEA 899 MG M+ +HG A+VVQAAC IG+AIEQEVRIH +LEKT+KK + +EGDE + Sbjct: 282 MGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVT 341 Query: 898 IKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQ 719 +Q +LR VR I+KGQ D+ KPWGQ+A AKVGSR+IELL Q+AYIQ Sbjct: 342 TEQEKLRKKVTDLIKKQKLPAVRRIVKGQ--DDFKPWGQDARAKVGSRVIELLTQTAYIQ 399 Query: 718 PPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYM 539 P DQL+D PPDI PAF H+++T+ ++ S+K+GVIEC+PL+ +GLE+TA+HMVIPYM Sbjct: 400 SPADQLADAPPDIFPAFTHALRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYM 459 Query: 538 PMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNTLGNTKW 359 PMLVPP W YDKGAH FLPSYVMRTHG+KQQR VK TP KQ++ VF+AL+TLGNTKW Sbjct: 460 PMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKW 519 Query: 358 RVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAKKENNER 179 RVN ++L ++DR+W+ GG+ A LVDR DV LPEKPETEDEA+LR W+WK++N KKEN ER Sbjct: 520 RVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRER 579 Query: 178 HAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 2 H+ RCD+ELKL+VA KM E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEG Sbjct: 580 HSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 638 >ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Vitis vinifera] gi|731418092|ref|XP_010660553.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed protein product [Vitis vinifera] Length = 1035 Score = 690 bits (1780), Expect = 0.0 Identities = 368/618 (59%), Positives = 440/618 (71%), Gaps = 47/618 (7%) Frame = -3 Query: 1714 LKESISMWRNIAKRAVSSRKLMKCL-----------------EDSIFKVNLKPLELNP-- 1592 LK+ MWRNIAKRA+ R KC+ +D IF +K P Sbjct: 34 LKKPTVMWRNIAKRAIP-RAPRKCVYLDSQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSS 92 Query: 1591 ----------FHQNGEVN----VIRKFCYRCLGDTSVSFSGNLRHPKGYASVAEAICTTD 1454 F + GE++ + + + CL + + FSG PK YASVAEA+ +TD Sbjct: 93 CSSSGFSEMGFRRIGEISSREDAVGRPSFGCLRN-QMGFSGFC--PKSYASVAEAVSSTD 149 Query: 1453 TEEDISVMDANQ---GEFQHEQEKEP--------KIVAGVGNAEYELLKRRQIKIETEAW 1307 EED+S D Q GE + E++++ K+ G+ Y L+RRQ+KIETEAW Sbjct: 150 VEEDVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAW 209 Query: 1306 EQAAKEYKELLADMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPY 1130 E AAKEYKELL DMCEQKLAPNLPYMKSLFLGWFEPLRD+I EQELCR G KA YAPY Sbjct: 210 ELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPY 269 Query: 1129 FDQLPAEMMAVITMHKLMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKT-RKK 953 FDQLPA+MM+VITMHKL+G M+ +HG+ +VVQAAC IG+AIEQEVRIHN+LEKT RKK Sbjct: 270 FDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKK 329 Query: 952 LGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAH 773 +G K K+ EG DP +Q +LR R I+KG D KPWG EA Sbjct: 330 VG--KDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGH--DNSKPWGPEAK 385 Query: 772 AKVGSRLIELLIQSAYIQPPVD-QLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECD 596 AKVGSRLIELL+Q+AYIQPPVD QL+D PPDIRPAF H+ KT+ ++ + R+FGVIECD Sbjct: 386 AKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECD 445 Query: 595 PLIFQGLEKTAKHMVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTP 416 PL+ +GLE+TA+HMVIPY+PMLVPP W YDKGAHLFLPSYVMRTHG++QQR VK P Sbjct: 446 PLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAP 505 Query: 415 VKQIQRVFDALNTLGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEA 236 Q++ VF+ALNTLGNTKWR+NK+L ++VDR+WA GG A LVDR DV LPEKP+TEDEA Sbjct: 506 RNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEA 565 Query: 235 ELRNWKWKIKNAKKENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPY 56 +LR WKWK+K+ KK N+ERH+ RCD+ELKLAVA KM EDGF+YPHNLDFRGRAYPMHPY Sbjct: 566 QLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPY 625 Query: 55 LNHLGSDLCRGILEFAEG 2 LNHLGSDLCRGILEFAEG Sbjct: 626 LNHLGSDLCRGILEFAEG 643 >ref|XP_009373754.1| PREDICTED: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like [Pyrus x bretschneideri] Length = 1024 Score = 677 bits (1746), Expect = 0.0 Identities = 352/605 (58%), Positives = 427/605 (70%), Gaps = 37/605 (6%) Frame = -3 Query: 1705 SISMWRNIAKRAVSSRK--------------LMKCLEDSIFKVNLKPLELNP-------- 1592 S S+WRN+AK+A+S + L++ +S+F KP E Sbjct: 33 STSLWRNLAKQAISGNQRCRLSSQSISRAYSLLRFSRESVFSEKFKPFETGSCLKGFPEV 92 Query: 1591 -FHQNGEVNVIRKFCYR-CLGDTSVSFSGNLRHPKGYASVAEAICTTDTEEDISVMDANQ 1418 F GE++ + LG N PKGYAS+AEA+ +TD EED+SV+D Q Sbjct: 93 GFCGKGEISSGESYMGNPSLGSVRNPIGFNGFCPKGYASIAEAVSSTDAEEDVSVVDEVQ 152 Query: 1417 GEFQ-----------HEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLA 1271 Q H + + V G+G A+Y LKRRQIKIETEAWE+AAKEY+EL+ Sbjct: 153 ELLQQMSKEGKRQTDHWRRMRQRRVRGMGQAKYLALKRRQIKIETEAWERAAKEYRELMM 212 Query: 1270 DMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPYFDQLPAEMMAVI 1094 DMCE KLAPNLPYMKSLFLGWFEPLR++I EQ+LCR+G KA YAPYFDQLPA+MM+VI Sbjct: 213 DMCEHKLAPNLPYMKSLFLGWFEPLRNAIEHEQDLCRKGKNKAAYAPYFDQLPADMMSVI 272 Query: 1093 TMHKLMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGDE 914 TMHKLMG M+ +HGT +VV AAC IGEAIEQEVRIHN+LE+TRKK K +E E Sbjct: 273 TMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHNFLEQTRKK---KVNKDEENRE 329 Query: 913 PDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQ 734 D +Q +L VRHI++ + D KPW EA AKVGSRLIELLIQ Sbjct: 330 SDDVMKEQEKLNKKVTKLMKKQKLRAVRHIVR--KYDASKPWSLEAKAKVGSRLIELLIQ 387 Query: 733 SAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNL-SRKFGVIECDPLIFQGLEKTAKH 557 +A+IQPP DQ +D PPDIRPAF H++ T+ D N SR+FGVI+C+PL+ +GLEKTA H Sbjct: 388 TAFIQPPADQSADSPPDIRPAFVHTLMTVTKDPRNTTSRRFGVIQCNPLVLKGLEKTASH 447 Query: 556 MVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNT 377 MVIPYMPMLVPP NWI YD+G + FLPSYVMRTHG+KQQR +K TP +Q++ VF AL+T Sbjct: 448 MVIPYMPMLVPPVNWIGYDRGGYFFLPSYVMRTHGAKQQREAIKKTPRQQLEPVFKALDT 507 Query: 376 LGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAK 197 LGNT+WRVNK++L +VDR+WASGG+ A LVDR +V LPE+P+T+DE L+ WKWK+K+AK Sbjct: 508 LGNTRWRVNKRVLNVVDRIWASGGRLADLVDRDNVPLPEEPDTDDETLLKKWKWKVKSAK 567 Query: 196 KENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 17 KEN ERH+ RCDLELKL VA KM E+GFYYPHNLDFRGRAYPMHPYLNHLGSDL RGIL Sbjct: 568 KENMERHSQRCDLELKLTVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLSRGIL 627 Query: 16 EFAEG 2 EFAEG Sbjct: 628 EFAEG 632 >ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis vinifera] Length = 978 Score = 676 bits (1745), Expect = 0.0 Identities = 347/597 (58%), Positives = 432/597 (72%), Gaps = 32/597 (5%) Frame = -3 Query: 1696 MWRNIAKRAVSSRKLMKCLEDSIFKVNLK-----PLELNPFHQNGEVNVIRKFC-YRCLG 1535 MWRN+AK A + R + S N P + VN +R R +G Sbjct: 1 MWRNLAKHAYTRRLQLSSQHSSFSPSNCTSRFYFPDKARALESQDHVNSLRPVAGLRRIG 60 Query: 1534 -----------------DTSVSFSGNLRHPKGYASVAEAICTTDTEEDISVMD------- 1427 T V+F G + KGYAS AEAI + EED+S +D Sbjct: 61 VLSFQQDELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIAS---EEDMSGVDEVQELVE 117 Query: 1426 -ANQGEFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLADMCEQKL 1250 N+G+ + EK+PK++ GV ++ +L+RRQIK+ETEAWE+AAKEY+ELL+DMCEQKL Sbjct: 118 EVNKGD---KLEKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKL 174 Query: 1249 APNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPYFDQLPAEMMAVITMHKLMG 1073 APNLPY+KSLFLGWFEPLRD IA+EQ+LC+QG +A YAPYFD LPA+MMAVITMHKLMG Sbjct: 175 APNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMG 234 Query: 1072 FFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGDEPDPEAIK 893 M+ + +G+A+VVQAAC IGEAIE EVRI ++EKT+KK A + +G +P + Sbjct: 235 LLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKK--SASSNNPDGGS-NPVTKE 291 Query: 892 QARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPP 713 Q +LR VR I+K Q D+ KPWGQ+A+ KVGSRLIELLI++AYIQPP Sbjct: 292 QEKLRKKVSMLMKKQKLQQVRQIVKRQ--DDSKPWGQDANVKVGSRLIELLIETAYIQPP 349 Query: 712 VDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPM 533 DQL DGPPDIRPAF H++KT+ ++ +R++GVIECDPL+ +GLEKTA+HMVIPYMPM Sbjct: 350 ADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPM 409 Query: 532 LVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNTLGNTKWRV 353 LVPP NW YDKGA+LFLPSYVMR HG++QQR +K P K ++ F+ALNTLGNTKWR+ Sbjct: 410 LVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRI 469 Query: 352 NKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAKKENNERHA 173 NK++L ++DR+WASGG+ A LVDR DV LPE+P+TEDEAE+R WKWK+++ KKEN+ERH+ Sbjct: 470 NKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHS 529 Query: 172 HRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 2 RCD+ELKLAVA KM EDGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG Sbjct: 530 QRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 586 >ref|XP_008230318.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial isoform X2 [Prunus mume] Length = 862 Score = 671 bits (1731), Expect = 0.0 Identities = 343/605 (56%), Positives = 424/605 (70%), Gaps = 37/605 (6%) Frame = -3 Query: 1705 SISMWRNIAKRAVSSRK--------------LMKCLEDSIFKVNLKPLELNP-------- 1592 S ++WRN AK+A+S ++ L++ ++S+F N KP EL+ Sbjct: 33 STTVWRNFAKQAISRKQRFHINSQSFSRAYSLLRICQESVFPGNFKPFELSSCSSLRFSE 92 Query: 1591 --FHQNGEVNVIRK-FCYRCLGDTSVSFSGNLRHPKGYASVAEAICTTDTEEDISVMDAN 1421 F G ++ C N PKGYASVAEA+ +TD EED+SV+D Sbjct: 93 VGFRGKGTISSPEDCMCKPSFWSVRNPIGFNGFCPKGYASVAEAVSSTDVEEDVSVVDEV 152 Query: 1420 QG-----------EFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELL 1274 Q E Q++Q G+G +Y +LKRRQIKIETEAWE+AAKEY+EL+ Sbjct: 153 QELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELM 212 Query: 1273 ADMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQGTK-ANYAPYFDQLPAEMMAV 1097 DMCEQKLAPNLPYMKSLFLGWFEPLR++I +EQ+LCR+G K A YAPY DQLPA+MM+V Sbjct: 213 MDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDNEQDLCRKGKKKAAYAPYIDQLPADMMSV 272 Query: 1096 ITMHKLMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGD 917 ITMHKLMG M+ +HGT +VV AAC IGEAIEQEVRIH +LE TRKK + K +E Sbjct: 273 ITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVD---KDQENG 329 Query: 916 EPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLI 737 E D ++ +L VR I+ + D K W EA AK+GSRLIELL Sbjct: 330 ESDAAMKEREKLNKKVTNLMKKQKLKAVRGIVS--KHDASKSWSLEARAKIGSRLIELLT 387 Query: 736 QSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKH 557 Q+A+IQPP DQL+DGPPDIRPAF H+ +T+ D+ N SR++GVIECDPL+ +GLEKTA+H Sbjct: 388 QTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARH 447 Query: 556 MVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNT 377 ++IPYMPMLVPP NW YDKG + FLPSYVMR HG++QQR +K TP +Q++ VF AL+ Sbjct: 448 VMIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDA 507 Query: 376 LGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAK 197 LGNT+WRVNK++L +VDR+WASGG A LVDR DV LPE+P+TEDE L+ WKWK+K+ K Sbjct: 508 LGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVK 567 Query: 196 KENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 17 KEN ERH+ RCD+ELKLAVA KM E+GFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGIL Sbjct: 568 KENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGIL 627 Query: 16 EFAEG 2 EF EG Sbjct: 628 EFQEG 632 >ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial isoform X1 [Prunus mume] Length = 1024 Score = 671 bits (1731), Expect = 0.0 Identities = 343/605 (56%), Positives = 424/605 (70%), Gaps = 37/605 (6%) Frame = -3 Query: 1705 SISMWRNIAKRAVSSRK--------------LMKCLEDSIFKVNLKPLELNP-------- 1592 S ++WRN AK+A+S ++ L++ ++S+F N KP EL+ Sbjct: 33 STTVWRNFAKQAISRKQRFHINSQSFSRAYSLLRICQESVFPGNFKPFELSSCSSLRFSE 92 Query: 1591 --FHQNGEVNVIRK-FCYRCLGDTSVSFSGNLRHPKGYASVAEAICTTDTEEDISVMDAN 1421 F G ++ C N PKGYASVAEA+ +TD EED+SV+D Sbjct: 93 VGFRGKGTISSPEDCMCKPSFWSVRNPIGFNGFCPKGYASVAEAVSSTDVEEDVSVVDEV 152 Query: 1420 QG-----------EFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELL 1274 Q E Q++Q G+G +Y +LKRRQIKIETEAWE+AAKEY+EL+ Sbjct: 153 QELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELM 212 Query: 1273 ADMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQGTK-ANYAPYFDQLPAEMMAV 1097 DMCEQKLAPNLPYMKSLFLGWFEPLR++I +EQ+LCR+G K A YAPY DQLPA+MM+V Sbjct: 213 MDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDNEQDLCRKGKKKAAYAPYIDQLPADMMSV 272 Query: 1096 ITMHKLMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGD 917 ITMHKLMG M+ +HGT +VV AAC IGEAIEQEVRIH +LE TRKK + K +E Sbjct: 273 ITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVD---KDQENG 329 Query: 916 EPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLI 737 E D ++ +L VR I+ + D K W EA AK+GSRLIELL Sbjct: 330 ESDAAMKEREKLNKKVTNLMKKQKLKAVRGIVS--KHDASKSWSLEARAKIGSRLIELLT 387 Query: 736 QSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKH 557 Q+A+IQPP DQL+DGPPDIRPAF H+ +T+ D+ N SR++GVIECDPL+ +GLEKTA+H Sbjct: 388 QTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARH 447 Query: 556 MVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNT 377 ++IPYMPMLVPP NW YDKG + FLPSYVMR HG++QQR +K TP +Q++ VF AL+ Sbjct: 448 VMIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDA 507 Query: 376 LGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAK 197 LGNT+WRVNK++L +VDR+WASGG A LVDR DV LPE+P+TEDE L+ WKWK+K+ K Sbjct: 508 LGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVK 567 Query: 196 KENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 17 KEN ERH+ RCD+ELKLAVA KM E+GFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGIL Sbjct: 568 KENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGIL 627 Query: 16 EFAEG 2 EF EG Sbjct: 628 EFQEG 632 >ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Phoenix dactylifera] Length = 1038 Score = 667 bits (1721), Expect = 0.0 Identities = 347/613 (56%), Positives = 431/613 (70%), Gaps = 48/613 (7%) Frame = -3 Query: 1696 MWRNIAKRAVSSRKLMKCL-------------------EDSIFKVNLKPLELN-PF-HQN 1580 MWRN+A++A SS + + +DSI + L+L PF H++ Sbjct: 38 MWRNLARKASSSSRYLDFAGRPSSVPAIPSISSFLGSSQDSICCERSRILDLGTPFSHRS 97 Query: 1579 GEVNVIRKF----CYRCLGDTSVSFSGNLRHPKGYASVAEAICTTDTEEDISVMDANQGE 1412 V RC + SG L + +ASVAEA+ +TD +ED S ++ QG Sbjct: 98 SNTGVGHNGDSSPFIRCPNFSIGRISGRLGDSRFFASVAEAVSSTDVDEDTSSIEEIQGM 157 Query: 1411 FQH----------------------EQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQA 1298 + +Q +P++V G+G+ +Y +L+RRQI+IETEAWEQA Sbjct: 158 LEEMSKIDVREGSKIGGNLEEVRPKQQLGQPRMVCGMGSGKYAILRRRQIRIETEAWEQA 217 Query: 1297 AKEYKELLADMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPYFDQ 1121 AKEYKELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IA+EQE CR T+ ++ PYF Q Sbjct: 218 AKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQEQCRDPRTRVSHGPYFYQ 277 Query: 1120 LPAEMMAVITMHKLMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEA 941 LPA+MMAVITMHKLM M+ + G +VVQAACQIGEAIE EVRIH +LEKTRKK Sbjct: 278 LPADMMAVITMHKLMSLLMTGNGDGGIRVVQAACQIGEAIEHEVRIHRFLEKTRKKTD-- 335 Query: 940 KGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVG 761 K K E E +Q LR VR I+KGQ D+ KPWGQ+A AKVG Sbjct: 336 KDKKNEDVEGATLTKEQEFLRKKVTNLMKKQKVHQVRKIVKGQ--DDSKPWGQDAQAKVG 393 Query: 760 SRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQ 581 SRLIELL+++AYIQPPV Q +DGPPDIRPAF+HS++T+ + SR++GVIECDPL+ Q Sbjct: 394 SRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHSRRYGVIECDPLVRQ 453 Query: 580 GLEKTAKHMVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQ 401 GL++TA+HMVIPYMPMLVPP NW Y+KG HLFLPSY+MRTHG++QQR V+ P K++Q Sbjct: 454 GLDRTARHMVIPYMPMLVPPVNWTGYEKGGHLFLPSYIMRTHGARQQREAVRRAPRKEMQ 513 Query: 400 RVFDALNTLGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNW 221 VF+AL+TLG+TKWRVNK++L +VDR+W+SGG+ A LVDR D+ LPEKP+TED AE+R W Sbjct: 514 AVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLVDRDDIPLPEKPDTEDGAEIRKW 573 Query: 220 KWKIKNAKKENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLG 41 KWK+K+ KKEN+E+H+ RCD+ELKLAVA KM E+GFYYPHNLDFRGRAYPMHPYLNHLG Sbjct: 574 KWKVKSVKKENSEKHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLG 633 Query: 40 SDLCRGILEFAEG 2 SDLCRGILEFAEG Sbjct: 634 SDLCRGILEFAEG 646 >ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica] gi|462411068|gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica] Length = 1024 Score = 667 bits (1721), Expect = 0.0 Identities = 344/605 (56%), Positives = 420/605 (69%), Gaps = 37/605 (6%) Frame = -3 Query: 1705 SISMWRNIAKRAVSSRK--------------LMKCLEDSIFKVNLKPLELNP-------- 1592 S ++WRN AK+A+S ++ L+ ++S+F N KP EL+ Sbjct: 33 STTVWRNFAKQAISRKQRFHINSQSFSRAYSLLGICQESVFPGNFKPFELSSCSSLRFSE 92 Query: 1591 --FHQNGEVNVIRK-FCYRCLGDTSVSFSGNLRHPKGYASVAEAICTTDTEEDISVMDAN 1421 F G ++ C N PKGYASVAEA+ +TD EE++SV+D Sbjct: 93 VGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAEAVSSTDVEEEVSVVDEV 152 Query: 1420 Q-----------GEFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELL 1274 Q E Q++Q G+G +Y +LKRRQIKIETEAWE+AAKEY+EL+ Sbjct: 153 QELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELM 212 Query: 1273 ADMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPYFDQLPAEMMAV 1097 DMCEQKLAPNLPYMKSLFLGWFEPLR++I EQ+LCR+G K YAPY DQLPA+MM+V Sbjct: 213 MDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPADMMSV 272 Query: 1096 ITMHKLMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGD 917 ITMHKLMG M+ +HGT +VV AAC IGEAIEQEVRIH +LE TRKK + K +E Sbjct: 273 ITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVD---KDQENG 329 Query: 916 EPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLI 737 E D ++ +L VR I+ + D K W EA AKVGSRLIELL Sbjct: 330 ESDAAKKEREKLNKKVTNLMKKQKLKAVRGIV--SKHDASKSWSLEARAKVGSRLIELLT 387 Query: 736 QSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKH 557 Q+A+IQPP DQL+DGPPDIRPAF H+ +T+ D+ N SR++GVIECDPL+ +GLEKTA+H Sbjct: 388 QTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARH 447 Query: 556 MVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNT 377 MVIPYMPMLVPP NW YDKG + FLPSYVMR HG++QQR +K TP +Q++ VF AL+ Sbjct: 448 MVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDA 507 Query: 376 LGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAK 197 LGNT+WRVNK++L +VDR+WASGG A LVDR DV LPE+P+TEDE L+ WKWK+K+ K Sbjct: 508 LGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVK 567 Query: 196 KENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 17 KEN ERH+ RCD ELKLAVA KM E+GFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGIL Sbjct: 568 KENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGIL 627 Query: 16 EFAEG 2 EF EG Sbjct: 628 EFQEG 632 >ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica] gi|462422319|gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica] Length = 1006 Score = 663 bits (1710), Expect = 0.0 Identities = 347/619 (56%), Positives = 437/619 (70%), Gaps = 54/619 (8%) Frame = -3 Query: 1696 MWRNIAKRAVSSRKL---------------MKCLEDSIFKVNLKPLELNP---------- 1592 MWRN+AK+ V+SRK M ++S F + E Sbjct: 1 MWRNLAKQ-VASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMG 59 Query: 1591 FHQNGEVNVIRKFCYRCLG---DTSVSFSGNLRHPKGYASVAEAICTTDTEEDIS----- 1436 F Q G++ ++ RC SG + KGYASVAEAI +TD EED S Sbjct: 60 FRQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSEEI 119 Query: 1435 -------VMDANQGEFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKEL 1277 + + N E +Q K ++V G+G +Y LL++RQIK+ETEAW++AAKEY+EL Sbjct: 120 QEMLEDLIRENNMVESHFKQPK--RVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQEL 177 Query: 1276 LADMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQ-GTKANYAPYFDQLPAEMMA 1100 LADMCEQKLAPNLPY+KSLFLGWFEPLRD+IA++Q+ C+Q ++ ++APYFD LPA+ MA Sbjct: 178 LADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADKMA 237 Query: 1099 VITMHKLMGFFMSIDDH-GTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKS-- 929 VITMHKLMG M+ + G+ +VVQAAC IGEAIE EVRIH +LEKT+KK K+ Sbjct: 238 VITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTIDKKAEA 297 Query: 928 ----------KEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQE 779 K DE + +Q RLR VR I+K E++++KPWGQE Sbjct: 298 DSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVK--EQEDLKPWGQE 355 Query: 778 AHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIEC 599 AH KVG RLI+LL+ +AYIQPPVDQ+ DGPPDIRPAF H++KTI D+ SR++GVIEC Sbjct: 356 AHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVIEC 415 Query: 598 DPLIFQGLEKTAKHMVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNT 419 DP++ +G+EKTA+HMV+PYMPMLVPP NW YD+GA+LFLPSYVMRTHG+KQQR VK T Sbjct: 416 DPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRT 475 Query: 418 PVKQIQRVFDALNTLGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDE 239 P KQ++ VF+AL+TLG+TKWRVNK++L ++DR+WASGG+ A LVDR DV LPE+P+TEDE Sbjct: 476 PRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDE 535 Query: 238 AELRNWKWKIKNAKKENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHP 59 AE+R WKWK+K AKKEN+ERH+ RCD+ELKLA + KM E+GFYYPHNLDFRGRAYPMHP Sbjct: 536 AEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHP 595 Query: 58 YLNHLGSDLCRGILEFAEG 2 YLNHLGSD+CRGILEF+EG Sbjct: 596 YLNHLGSDMCRGILEFSEG 614 >ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Prunus mume] Length = 1006 Score = 660 bits (1704), Expect = 0.0 Identities = 345/619 (55%), Positives = 436/619 (70%), Gaps = 54/619 (8%) Frame = -3 Query: 1696 MWRNIAKRAVS---------------SRKLMKCLEDSIFK----------VNLKPLELNP 1592 MWRN+AK+ S S ++ E S + +N + L + Sbjct: 1 MWRNLAKQVASRKTNLSSQSHFSSPSSTSMIFSQESSFLEKAWHFEARKCINNRILVMG- 59 Query: 1591 FHQNGEVNVIRKFCYRCLG---DTSVSFSGNLRHPKGYASVAEAICTTDTEEDIS----- 1436 F Q G++ + RC SG + KGYASVAEAI +TD EED S Sbjct: 60 FRQVGDMASQKDELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSEEI 119 Query: 1435 -------VMDANQGEFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKEL 1277 + + N E +Q K ++V G+G +Y LL++RQIK+ETEAW++AAKEY+EL Sbjct: 120 QEMLEDLIRENNMVESHFKQPK--RVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQEL 177 Query: 1276 LADMCEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQ-GTKANYAPYFDQLPAEMMA 1100 LADMCEQKLAPNLPY+KSLFLGWFEPLRD+IA++Q+ C+Q ++ ++APYFD LPA+ MA Sbjct: 178 LADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQTNSRQSHAPYFDHLPADKMA 237 Query: 1099 VITMHKLMGFFMSIDDH-GTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKS-- 929 VITMHKLMG M+ + G+ +VVQAAC IGEAIE EVRIH +LEKT+KK K+ Sbjct: 238 VITMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTTDKKAEA 297 Query: 928 ----------KEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQE 779 K DE A +Q +LR VR I+K E++++KPWGQE Sbjct: 298 DSVPVTDEQEKLADEQGKLADEQEKLRKKVNKLIKRQKMQQVRGIVK--EQEDLKPWGQE 355 Query: 778 AHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIEC 599 AH KVG RLI+LL+ +AYIQPPVDQ+ DGPPDIRPAF H++KTI D+ SR++GVIEC Sbjct: 356 AHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITKDTQKTSRRYGVIEC 415 Query: 598 DPLIFQGLEKTAKHMVIPYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNT 419 DPL+ +G++KTA+HMV+PYMPMLVPP NW YD+GA+LFLPSYVMRTHG+KQQR VK T Sbjct: 416 DPLVRKGMDKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRT 475 Query: 418 PVKQIQRVFDALNTLGNTKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDE 239 P KQ++ VF+AL+TLG+TKWRVNK++L ++DR+WASGG+ A LVDR DV LPE+P+TEDE Sbjct: 476 PRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDE 535 Query: 238 AELRNWKWKIKNAKKENNERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHP 59 AE+R WKWK+K AKKEN+ERH+ RCD+ELKLA + KM E+GFYYPHNLDFRGRAYPMHP Sbjct: 536 AEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHP 595 Query: 58 YLNHLGSDLCRGILEFAEG 2 YLNHLGSD+CRGILEF+EG Sbjct: 596 YLNHLGSDMCRGILEFSEG 614 >ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana sylvestris] gi|90111039|sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2, chloroplastic/mitochondrial; AltName: Full=NsRpoT-B; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 2; Flags: Precursor [Nicotiana sylvestris] gi|21425639|emb|CAC82575.2| phage-type RNA polymerase [Nicotiana sylvestris] Length = 1020 Score = 660 bits (1704), Expect = 0.0 Identities = 342/600 (57%), Positives = 427/600 (71%), Gaps = 35/600 (5%) Frame = -3 Query: 1696 MWRNIAKRAVSSRKLMKCL--------------EDSIFKVNLKPLELNPFHQNGEVNVIR 1559 MWRNI K+ +SSR K L +DSIFK N K L P + V + Sbjct: 35 MWRNIIKQ-LSSRTPQKLLFSSKNRTYSFLGFGQDSIFKDNTKFRSLIPISCSNIVMGFQ 93 Query: 1558 KFCYRCLGDTSVS-------FSGNLRHPKGYASVAEAIC--TTDTEEDISVMDA------ 1424 GD +S + N K YASVAEA+ +TD EED+SV+D Sbjct: 94 NLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLT 153 Query: 1423 -----NQGEFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLADMCE 1259 + +F + K+ + +G+G+ +Y+ LKRRQ+K+ETEAWEQAAKEYKELL DMCE Sbjct: 154 ELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCE 213 Query: 1258 QKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPYFDQLPAEMMAVITMHK 1082 QKLAPNLPY+KSLFLGWFEPLRD IA EQELC QG +KA YA YF QLPA+MMAVITMHK Sbjct: 214 QKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHK 273 Query: 1081 LMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGDEPDPE 902 LMG M+ DHGTA+VVQAA IG+AIEQEVRIHN+LEKT+K+ E + ++G+ E Sbjct: 274 LMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHVTQE 333 Query: 901 AIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYI 722 Q +LR V I++ Q D+ KPWGQ+A AKVGSRLI+LL+Q+AYI Sbjct: 334 ---QEKLRKKVTNLMKKQKLRAVGQIVRRQ--DDSKPWGQDARAKVGSRLIDLLLQTAYI 388 Query: 721 QPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPY 542 QPP +QL+ PPDIRPAF HS++T+ ++ + SR++G+I+CD L+F+GLE+TA+HMVIPY Sbjct: 389 QPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPY 448 Query: 541 MPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNTLGNTK 362 MPMLVPP W YDKG HL+LPSYVMRTHG++QQR VK Q+Q VF+AL+TLGNTK Sbjct: 449 MPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTK 508 Query: 361 WRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAKKENNE 182 WR+NK++L +VDR+WA GG+ A LVDR D LPE+P+TEDEA W+WK+K+ KKEN E Sbjct: 509 WRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRE 568 Query: 181 RHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 2 RH+ RCD+ELKLAVA KM E+ F+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+LEFAEG Sbjct: 569 RHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEG 628 >dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] gi|17221595|dbj|BAB78465.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] Length = 1020 Score = 660 bits (1702), Expect = 0.0 Identities = 342/600 (57%), Positives = 427/600 (71%), Gaps = 35/600 (5%) Frame = -3 Query: 1696 MWRNIAKRAVSSRKLMKCL--------------EDSIFKVNLKPLELNPFHQNGEVNVIR 1559 MWRNI K+ +SSR K L +DSIFK N K L P + V + Sbjct: 35 MWRNIIKQ-LSSRTPQKLLFSSKNRTYSFLGFGQDSIFKDNTKFRSLIPISCSNIVMGFQ 93 Query: 1558 KFCYRCLGDTSVS-------FSGNLRHPKGYASVAEAIC--TTDTEEDISVMDA------ 1424 GD +S + N K YASVAEA+ +TD EED+SV+D Sbjct: 94 NLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLT 153 Query: 1423 -----NQGEFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLADMCE 1259 + +F + K+ + +G+G+ +Y+ LKRRQ+K+ETEAWEQAAKEYKELL DMCE Sbjct: 154 ELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCE 213 Query: 1258 QKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPYFDQLPAEMMAVITMHK 1082 QKLAPNLPY+KSLFLGWFEPLRD IA EQELC QG +KA YA YF QLPA+MMAVITMHK Sbjct: 214 QKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHK 273 Query: 1081 LMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGDEPDPE 902 LMG M+ DHGTA+VVQAA IG+AIEQEVRIHN+LEKT+K+ E + ++G+ E Sbjct: 274 LMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHVTQE 333 Query: 901 AIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYI 722 Q +LR V I++ Q D+ KPWGQ+A AKVGSRLI+LL+Q+AYI Sbjct: 334 ---QEKLRKKVTNLMKKQKLRAVGQIVRRQ--DDSKPWGQDARAKVGSRLIDLLLQTAYI 388 Query: 721 QPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPY 542 QPP +QL+ PPDI PAF HS++T+ ++ + SR++G+I+CD L+F+GLE+TA+HMVIPY Sbjct: 389 QPPANQLAVDPPDIPPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPY 448 Query: 541 MPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNTLGNTK 362 MPMLVPP W YDKG HL+LPSYVMRTHG++QQR VK Q+Q VF+AL+TLGNTK Sbjct: 449 MPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTK 508 Query: 361 WRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAKKENNE 182 WR+NK++L +VDR+WA GG+ A LVDR D LPE+P+TEDEA L W+WK+K+ KKEN E Sbjct: 509 WRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALLPKWRWKVKSVKKENRE 568 Query: 181 RHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 2 RH+ RCD+ELKLAVA KM E+ F+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+LEFAEG Sbjct: 569 RHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEG 628 >ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial [Nicotiana tomentosiformis] Length = 1021 Score = 660 bits (1702), Expect = 0.0 Identities = 345/602 (57%), Positives = 430/602 (71%), Gaps = 37/602 (6%) Frame = -3 Query: 1696 MWRNIAKRAVSSRKLMKCL--------------EDSIFKVNLKPLELNP---------FH 1586 MWRNI K+ +SSR K L +DS+FK N K L P F Sbjct: 35 MWRNIIKQ-LSSRTPQKLLFSSKNRTYSFLGFGQDSVFKDNTKFRSLIPISCSNIVMGFQ 93 Query: 1585 QNGEVNVIRKFCYRCLGDTSVSFSGNLRHPKGYASVAEAIC--TTDTEEDISVMDANQG- 1415 GE +F R L + V+ S + K YASVAEA+ +TD EED+SV+D Q Sbjct: 94 NLGEYLPGDEFLSRPLLKSQVN-SNDFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVQEL 152 Query: 1414 ----------EFQHEQEKEPKIVAGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLADM 1265 +F + K+ + +G+G+ +Y+ LKRRQ+K+ETEAWEQAAKEYKELL DM Sbjct: 153 LTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDM 212 Query: 1264 CEQKLAPNLPYMKSLFLGWFEPLRDSIASEQELCRQG-TKANYAPYFDQLPAEMMAVITM 1088 CEQKLAPNLPY+KSLFLGWFEPLRD IA EQELC QG +KA YA Y QLPA+MMAVITM Sbjct: 213 CEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITM 272 Query: 1087 HKLMGFFMSIDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKLGEAKGKSKEGDEPD 908 HKLMG M+ DHGTA+VVQAA IG+AIEQEVRIHN+LEKT+K+ E + ++G+ Sbjct: 273 HKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHVT 332 Query: 907 PEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSA 728 E Q +LR V I++ Q D+ KPWGQ+A AKVGSRLIELL+Q+A Sbjct: 333 QE---QEKLRKKVTNLMKKQKLRAVGQIVRRQ--DDSKPWGQDAKAKVGSRLIELLLQTA 387 Query: 727 YIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVI 548 YIQPP +QL+ PPDIRPAF HS++T+ ++ + SR++G+I+CD L+F+GLE+TA+HMVI Sbjct: 388 YIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVI 447 Query: 547 PYMPMLVPPENWIRYDKGAHLFLPSYVMRTHGSKQQRLEVKNTPVKQIQRVFDALNTLGN 368 PYMPMLVPP W YDKG HL+LPSYVMRTHG++QQR VK Q+Q VF+AL+TLG+ Sbjct: 448 PYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGS 507 Query: 367 TKWRVNKKLLEIVDRVWASGGKYAGLVDRADVVLPEKPETEDEAELRNWKWKIKNAKKEN 188 TKWR+NK++L +VDR+WA GG+ A LVDR D LPE+P+TEDEA W+WK+K+ KKEN Sbjct: 508 TKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKEN 567 Query: 187 NERHAHRCDLELKLAVAHKMSAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFA 8 ERH+ RCD+ELKLAVA KM E+GF+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+LEFA Sbjct: 568 RERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFA 627 Query: 7 EG 2 EG Sbjct: 628 EG 629