BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00040534
         (2135 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   186   6e-44
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   180   5e-42
ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643...   170   4e-39
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   170   5e-39
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   168   2e-38
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   168   2e-38
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc...   167   3e-38
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   167   5e-38
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [...   166   6e-38
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   165   2e-37
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...   164   2e-37
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   164   4e-37
ref|XP_012079749.1| PREDICTED: uncharacterized protein LOC105640...   164   4e-37
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  164   4e-37
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   164   4e-37
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    163   7e-37
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]           163   7e-37
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc...   163   7e-37
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     163   7e-37
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]        163   7e-37

>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  186 bits (473), Expect = 6e-44
 Identities = 112/305 (36%), Positives = 156/305 (51%), Gaps = 30/305 (9%)
 Frame = -2

Query: 826  PPYNLIRYNYYIECQICIKPGHSSKECRYRY---------ATNDNYMDQAHYTTSAYPGD 674
            PP+N    N    CQ+C K GH   +C YR+          ++ N   +A+Y+ S     
Sbjct: 297  PPWNSDNQNEKPACQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPRAYYSFS----- 351

Query: 673  DYDDFWYPEPEAFAVYNENSPSTSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGN 494
                     P+   V   +   +   W PDSGA++H+T N  NL   +E+ G + V VGN
Sbjct: 352  ---------PQVNGVIPTSEVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGN 402

Query: 493  GSGLNISHIGTS--IIKHDNYTFTLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFY 320
            G+GL+I HIG S  +    +    L+++LHVPSIT+NL+SV +F+K+N  FFEFH D  +
Sbjct: 403  GTGLSIKHIGQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCF 462

Query: 319  VKDVNTNKVLLTGPVRDGLY-----HLGFTFAQ--------------LKQALTSTAPSSS 197
            VKD  T  VL+ G VRDGLY     HL     Q               K   TS + +  
Sbjct: 463  VKDQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFD 522

Query: 196  TWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQNICSACQLAKNHALPFPTSSKSVYGPLDL 17
             WH +LGHP+  T+KNVLS  +    + +  N CS+C L K H  PF  S  +   PL+L
Sbjct: 523  LWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLEL 582

Query: 16   IHSDV 2
            IH D+
Sbjct: 583  IHLDL 587


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score =  180 bits (456), Expect = 5e-42
 Identities = 98/263 (37%), Positives = 143/263 (54%), Gaps = 1/263 (0%)
 Frame = -2

Query: 787 CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 608
           CQ+C K GH++ +C YRY                      D+ + P+ +  A    NS  
Sbjct: 278 CQVCFKRGHTAADCWYRY----------------------DEDYVPDAKHVAAAAVNSYG 315

Query: 607 TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNY-TF 431
             + W  D+GAT H+T  L  L M  +Y G + +   +G+G++ISHIG +I+ + N    
Sbjct: 316 VDTNWYIDTGATDHVTGELDKLTMKEKYNGGEQIHTASGAGMDISHIGHAIVHNPNSRNI 375

Query: 430 TLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLG 251
            L NVL+VP   +NL+SVH+   +N+ F E H D F++KD  T K LL G     LY L 
Sbjct: 376 HLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLKDQITRKTLLKGRSWRRLYPL- 434

Query: 250 FTFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQNICSACQLAKN 71
              + LKQA ++   S   WH++LGHP+  T+K V++       D  S+++C+ACQ AK+
Sbjct: 435 -PHSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKS 493

Query: 70  HALPFPTSSKSVYGPLDLIHSDV 2
           H LPFP SS     PL+L+ SDV
Sbjct: 494 HQLPFPISSSVSKHPLELVFSDV 516


>ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643719 [Jatropha curcas]
          Length = 1003

 Score =  170 bits (431), Expect = 4e-39
 Identities = 104/283 (36%), Positives = 148/283 (52%), Gaps = 22/283 (7%)
 Frame = -2

Query: 787  CQICIKPGHSSKECRYRYATNDNYMDQ---------AHYT-----TSAYPG--------D 674
            CQIC    H++ +CR RY  ++   +Q         A+Y+      S YP          
Sbjct: 255  CQICGYRNHTADKCRRRYHRSNPSQNQNQVRYPPPMANYSYSYPSPSPYPSPSSHFSSPQ 314

Query: 673  DYDDFWYPEPEAFAVYNENSPSTSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGN 494
               +++ P P   A Y+  SP T + W PD+ A +H+T ++ +L+  +EYQGHD++ VGN
Sbjct: 315  SVTNYYSPSPP-MANYSAASP-TQNLWHPDTAANYHVTPDIQSLSATTEYQGHDNLHVGN 372

Query: 493  GSGLNISHIGTSIIKHDNYTFTLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVK 314
            G GL ISH GT +I   N    L + L VP I +NL+SV +F+ +N  FFEF    F+VK
Sbjct: 373  GVGLPISHTGTVVIPSSNGALQLKHTLCVPKIVKNLLSVQKFTTDNCCFFEFWPHCFFVK 432

Query: 313  DVNTNKVLLTGPVRDGLYHLGFTFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLV 134
            D  T K+LL GP  DG+Y L      LK  +++T PS S WH+ LGHP  +T+  ++   
Sbjct: 433  DQVTKKILLQGPSEDGIYSLKL---PLKSVMSATVPSFSDWHSALGHPHRRTVSKIIK-D 488

Query: 133  HEVLDDHLSQNICSACQLAKNHALPFPTSSKSVYGPLDLIHSD 5
              +       N CSAC L K   L   +      GP  +IHSD
Sbjct: 489  FNLPCSSFQFNPCSACNLGKLSRLSLASVEHKSTGPFQIIHSD 531



 Score = 65.1 bits (157), Expect(2) = 4e-10
 Identities = 39/125 (31%), Positives = 61/125 (48%)
 Frame = -1

Query: 1739 KLTSTNYPLWKSQIVPLQRSYNLFIFVDGSFHCLVKYYRKTSPAGQEIVSKEGFVDSDPD 1560
            KL  TNY  WK+Q  PL   +N    +DGS           SP  + I S      S+P+
Sbjct: 22   KLKPTNYLAWKTQFQPLLNYHNFNHLIDGS-----------SPPSKTIKSP-----SNPE 65

Query: 1559 NEFVFNPLYNYWVNQDQAILSWLFSACVKETHSQVIDCTFSHKIWVRLEHNYNATMKSRL 1380
             + + NP Y  W  QDQ + SWL S+  +E  S ++    SH++W  L   + +  ++R 
Sbjct: 66   VD-IPNPDYQSWFKQDQLLHSWLHSSLSEEVFSHIVGLNTSHEVWQALAQAFGSLSQNRQ 124

Query: 1379 MQLKL 1365
            +Q+ +
Sbjct: 125  LQIHI 129



 Score = 29.3 bits (64), Expect(2) = 4e-10
 Identities = 21/84 (25%), Positives = 37/84 (44%)
 Frame = -3

Query: 1374 IETNLVHLKKSSDSMLVYFNKARSISHQLAQMDRPISDEDLVFHILQGLPAEYNAFKTSV 1195
            I   L   KK+  S+  Y  +A+ +  +L    RP+S  +    I + +  EY+    ++
Sbjct: 127  IHIELQEFKKNDLSVSAYLQRAKQLKDELQVAGRPLSTAEFNAIIYRNIGIEYH----NI 182

Query: 1194 ITQQLKNDNLITTAELLGMLLSEE 1123
            IT        +   EL G L++ E
Sbjct: 183  ITALNLRAEPVPFHELHGQLVAHE 206


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  170 bits (430), Expect = 5e-39
 Identities = 96/264 (36%), Positives = 139/264 (52%), Gaps = 2/264 (0%)
 Frame = -2

Query: 787  CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 608
            CQ+C K GH   +C YRY  ++N++  +    +A  G D                     
Sbjct: 1242 CQLCGKIGHVVADCWYRY--DENFIPDSKTAAAASYGVD--------------------- 1278

Query: 607  TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 428
              + W  D+GAT HIT  L  L  H +Y G + +   +G+G++I H+G SII        
Sbjct: 1279 --TNWYMDTGATDHITGELDKLTTHEKYNGKEQIHTASGAGMDIKHVGHSIIHTPICNIQ 1336

Query: 427  LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHL-G 251
            L N+LHVP   +NLIS H+ + +N+ F E H   F +KD  T  +LL GP R+GLY L  
Sbjct: 1337 LKNILHVPKAEKNLISAHRLAVDNHAFVEVHPRFFAIKDQVTKNLLLRGPCRNGLYPLPT 1396

Query: 250  FTFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVH-EVLDDHLSQNICSACQLAK 74
             + A  KQ L +  P+ S WH++LGHP+   ++ V+S  +   L D     +C+ACQ AK
Sbjct: 1397 SSLATSKQVLGAIKPTMSRWHSRLGHPSLAIVQKVVSSNNLPCLGDVNESGVCNACQQAK 1456

Query: 73   NHALPFPTSSKSVYGPLDLIHSDV 2
            +H LP+P S      PL+L+ SDV
Sbjct: 1457 SHQLPYPKSFSVSNNPLELVFSDV 1480


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  168 bits (425), Expect = 2e-38
 Identities = 103/275 (37%), Positives = 139/275 (50%), Gaps = 12/275 (4%)
 Frame = -2

Query: 790  ECQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSP 611
            +CQ+C K GH+   C +R+  N    +         P  D      P  +        SP
Sbjct: 320  QCQLCGKFGHTVVRCYHRFDINFQGYN---------PNMDTVQTNKPNAKNQVQAMMASP 370

Query: 610  STSS--GWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNY 437
            ST S   W  D+GATHH++ ++  L+    Y G+D V VGNG  L I H GT+     + 
Sbjct: 371  STISDEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGKHLRILHTGTTFFPSSSK 430

Query: 436  TFTLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYH 257
            TF L  VLHVP I  NLISV QF  +NN FFEFH   F+VKD  T K+LL G +  GLY 
Sbjct: 431  TFQLRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGLYR 490

Query: 256  LGFTFAQLKQALTSTA----------PSSSTWHNKLGHPAYKTLKNVLSLVHEVLDDHLS 107
                F     A  S++           +++ WH++LGHPA   LK++L+  +     H  
Sbjct: 491  FPARFVPSPAAFVSSSYDRSSNLSLTTTTTLWHSRLGHPADNILKHILTSCNISHQCH-K 549

Query: 106  QNICSACQLAKNHALPFPTSSKSVYGPLDLIHSDV 2
             N+C ACQ AK+H LPF         PL L+H+D+
Sbjct: 550  NNVCCACQFAKSHKLPFNVXVSRASHPLALLHADL 584



 Score = 55.8 bits (133), Expect(2) = 2e-11
 Identities = 46/156 (29%), Positives = 70/156 (44%)
 Frame = -1

Query: 1832 LQTLNLPSIQHFIQTMVDTNQHISLTFKPPSKLTSTNYPLWKSQIVPLQRSYNLFIFVDG 1653
            LQ   LPS     QTM   N  +      P KL   NY LW++Q+  +       +F +G
Sbjct: 75   LQAGTLPSSTGATQTMQMLNHAL------PIKLDRNNYILWRTQMENV-------VFANG 121

Query: 1652 SFHCLVKYYRKTSPAGQEIVSKEGFVDSDPDNEFVFNPLYNYWVNQDQAILSWLFSACVK 1473
             F   ++  +   P  Q+  S E             NP +  W   D+ ILSW++S+   
Sbjct: 122  -FEDHIEGLKICPP--QKTSSGE------------TNPDFVMWRRFDRMILSWIYSSLTP 166

Query: 1472 ETHSQVIDCTFSHKIWVRLEHNYNATMKSRLMQLKL 1365
            E   Q++    SH  W  LE  + A+ ++R+MQL+L
Sbjct: 167  EIMGQIVGYQSSHAXWFALEXXFXASSRARVMQLRL 202



 Score = 42.7 bits (99), Expect(2) = 2e-11
 Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
 Frame = -3

Query: 1350 KKSSDSMLVYFNKARSISHQLAQMDRPISDEDLVFHILQGLPAEYNAFKTSVITQQ---- 1183
            +K S +M+ Y  K +S++  LA +  P++D D +  +L GL A+YN+   S+  ++    
Sbjct: 208  RKGSLTMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNSIVASLTAREDEDN 267

Query: 1182 -LKNDNLIT 1159
             +  DN+I+
Sbjct: 268  SVAEDNVIS 276


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1431

 Score =  168 bits (425), Expect = 2e-38
 Identities = 96/265 (36%), Positives = 137/265 (51%), Gaps = 3/265 (1%)
 Frame = -2

Query: 787 CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPE--AFAVYNENS 614
           CQ+C K GH + +C +RY                      DD + P+ +    A Y   +
Sbjct: 272 CQVCHKRGHVASDCWHRY----------------------DDSYVPDEKLGGAATY---A 306

Query: 613 PSTSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYT 434
               + W  D+GAT HIT  L  L     Y+G D +   +G G +I H+G +I+   ++ 
Sbjct: 307 YGVDTNWYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGTSIKHVGHAIVPTPSHP 366

Query: 433 FTLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHL 254
             L NVLHVP   +NL+SVH+   +N  F E H   F +KD  T + +L GP R GLY L
Sbjct: 367 LHLKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPL 426

Query: 253 GFTFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVH-EVLDDHLSQNICSACQLA 77
               + L+QA  +T PS   WH +LGHP+   +  +LS      L + +++++C ACQ A
Sbjct: 427 P-ARSSLRQAFVAT-PSFVRWHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQA 484

Query: 76  KNHALPFPTSSKSVYGPLDLIHSDV 2
           K H LPFP S+     PL+LIHSDV
Sbjct: 485 KCHQLPFPRSTSVSNNPLELIHSDV 509


>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1202

 Score =  167 bits (424), Expect = 3e-38
 Identities = 96/263 (36%), Positives = 136/263 (51%), Gaps = 1/263 (0%)
 Frame = -2

Query: 787 CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 608
           CQ+C K GH + +C +RY  +D+Y+       +A      D  WY               
Sbjct: 281 CQVCHKRGHVASDCWHRY--DDSYVPDEKLGGAATYAYGIDTNWYV-------------- 324

Query: 607 TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 428
                  D+GAT HIT  L  L     Y+G D +   +G G++I H+G +I+   +    
Sbjct: 325 -------DTGATDHITGQLDKLTTKERYKGTDQIHTASGEGMSIKHVGHAIVPTPSRPLH 377

Query: 427 LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLGF 248
           L NVLHVP   +NL+SVH+   +N  F E H   F +KD  T + +L GP R GLY L  
Sbjct: 378 LKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPLP- 436

Query: 247 TFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVH-EVLDDHLSQNICSACQLAKN 71
             + L+QA  +T PS   WH +LGHP+   +  +LS      L + +++++C ACQ AK 
Sbjct: 437 ARSSLRQAFVAT-PSFVRWHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKC 495

Query: 70  HALPFPTSSKSVYGPLDLIHSDV 2
           H LPFP S+     PL+LIHSDV
Sbjct: 496 HQLPFPRSTSVSNNPLELIHSDV 518


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  167 bits (422), Expect = 5e-38
 Identities = 99/265 (37%), Positives = 141/265 (53%), Gaps = 3/265 (1%)
 Frame = -2

Query: 787  CQICIKPGHSSKECRYRYATNDNYM-DQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSP 611
            CQ+C + GH++  C YR+  ++NY+ DQ    ++A+                     N P
Sbjct: 282  CQVCSRVGHTALNCWYRF--DENYVPDQRSANSAAHQN-----------------GSNVP 322

Query: 610  STSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTF 431
                 W  D+GAT HIT +L  L MH +Y G D +   NG+G+ IS+IG +I+   + + 
Sbjct: 323  -----WYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIGNAIVPTSSRSL 377

Query: 430  TLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHL- 254
             L +VLHVPS  +NLISVH+ + +N+ F EFH   F +KD  T  VLL G  RDGLY L 
Sbjct: 378  HLRSVLHVPSTHKNLISVHRLTNDNDVFIEFHSSHFLIKDRQTKAVLLHGKCRDGLYPLP 437

Query: 253  GFTFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVH-EVLDDHLSQNICSACQLA 77
                 +LK   +ST      WH +LGHP+   +  V+S  +   L ++ + ++C AC  A
Sbjct: 438  PHPDLRLKHNFSSTRVPLEHWHKRLGHPSRDIVHRVISNNNLPCLSNNSTTSVCDACLQA 497

Query: 76   KNHALPFPTSSKSVYGPLDLIHSDV 2
            K H LP+  S      PL LI SDV
Sbjct: 498  KAHQLPYTISMSQSSAPLMLIFSDV 522



 Score = 65.1 bits (157), Expect = 2e-07
 Identities = 36/125 (28%), Positives = 60/125 (48%)
 Frame = -1

Query: 1739 KLTSTNYPLWKSQIVPLQRSYNLFIFVDGSFHCLVKYYRKTSPAGQEIVSKEGFVDSDPD 1560
            KLT  NY LWK+Q++P  R+  L   +                 G EI   +   D+   
Sbjct: 23   KLTKGNYLLWKAQVLPAIRAAQLDDIL----------------TGVEICPPKTISDASDR 66

Query: 1559 NEFVFNPLYNYWVNQDQAILSWLFSACVKETHSQVIDCTFSHKIWVRLEHNYNATMKSRL 1380
               V NP Y  W+ +DQA+L +L S+  +E  S V++C+ S  +W  L   Y++  ++R 
Sbjct: 67   TVTVANPAYGRWIARDQAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSSHSRARK 126

Query: 1379 MQLKL 1365
            +  ++
Sbjct: 127  VNTRI 131


>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
           Japonica Group] gi|31431217|gb|AAP53032.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1042

 Score =  166 bits (421), Expect = 6e-38
 Identities = 96/263 (36%), Positives = 134/263 (50%), Gaps = 1/263 (0%)
 Frame = -2

Query: 787 CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 608
           C +C K GH +  C +RY                      D+ + P+ +  A     S  
Sbjct: 178 CHVCYKRGHVAANCWHRY----------------------DEDYVPDDKLVAAATY-SHG 214

Query: 607 TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 428
             S W  D+GAT HITS L  LN    Y+GHD +   +G+G+ I HIG +I+        
Sbjct: 215 ADSNWYVDTGATDHITSQLEKLNTREVYKGHDQIHTASGAGMKIKHIGHAIVHTPTRPLH 274

Query: 427 LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLGF 248
           L+NVLHVP   +NLIS  + + +N+ F E H   F +KD  T   +L GP R GLY L  
Sbjct: 275 LNNVLHVPQAAKNLISATKLASDNSVFVEIHSKYFLIKDRTTRSTVLKGPRRHGLYPLPS 334

Query: 247 TFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVH-EVLDDHLSQNICSACQLAKN 71
           T +  KQA  + APS   WH++LGHP+   +  V+S      L +   +++C ACQ AK+
Sbjct: 335 T-SSTKQAF-AVAPSLERWHSRLGHPSIPIVMKVISSNKLPCLRESNKESVCDACQKAKS 392

Query: 70  HALPFPTSSKSVYGPLDLIHSDV 2
           H LP+  S      PL+LI+SDV
Sbjct: 393 HQLPYSNSMSVSNKPLELIYSDV 415


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  165 bits (417), Expect = 2e-37
 Identities = 99/276 (35%), Positives = 150/276 (54%), Gaps = 13/276 (4%)
 Frame = -2

Query: 790  ECQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSP 611
            +CQ+C K GH+++ C +R+    +   Q   TT ++  ++ +    P   A A    N+P
Sbjct: 288  QCQLCGKFGHTAQICYHRF----DISFQGGQTTISHSLNNGNQNNIPAMVASA---SNNP 340

Query: 610  STSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTF 431
            +  S W  DSGA+HH+T NL NL   S Y G D V +GNG  L+IS+IG+  +    ++F
Sbjct: 341  ADES-WYLDSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSF 399

Query: 430  TLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLG 251
             L  V HVP I+ NLISV +F  ENN   EFH + F+VKD++T  VL  G + +GLY   
Sbjct: 400  RLKKVFHVPFISANLISVAKFCSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKFP 459

Query: 250  FTFAQLK-------------QALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVHEVLDDHL 110
              F+ LK             Q  ++    +  WHN+LGH ++  +  V++  + V     
Sbjct: 460  -VFSNLKPYSSINNASAFHSQFSSTVENKAELWHNRLGHASFDIVSKVMNTCN-VASGKY 517

Query: 109  SQNICSACQLAKNHALPFPTSSKSVYGPLDLIHSDV 2
               +CS CQLAK+H LP   S+     PL+L+++D+
Sbjct: 518  KSFVCSDCQLAKSHRLPTQLSNFHASKPLELVYTDI 553



 Score = 66.6 bits (161), Expect(2) = 6e-17
 Identities = 44/142 (30%), Positives = 65/142 (45%)
 Frame = -1

Query: 1790 TMVDTNQHISLTFKPPSKLTSTNYPLWKSQIVPLQRSYNLFIFVDGSFHCLVKYYRKTSP 1611
            TM     +  L    P KL  TNY LW+SQI  +  +     F+DG+  C  K       
Sbjct: 22   TMASIPSYQMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEK------- 74

Query: 1610 AGQEIVSKEGFVDSDPDNEFVFNPLYNYWVNQDQAILSWLFSACVKETHSQVIDCTFSHK 1431
                        D  P    V NP +  W  QD+ ILSW++S+      +Q+I    SH 
Sbjct: 75   ------------DLSPG---VMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHS 119

Query: 1430 IWVRLEHNYNATMKSRLMQLKL 1365
             W  LE  ++++ ++R+MQL+L
Sbjct: 120  AWNALESIFSSSSRARIMQLRL 141



 Score = 50.8 bits (120), Expect(2) = 6e-17
 Identities = 31/99 (31%), Positives = 54/99 (54%)
 Frame = -3

Query: 1374 IETNLVHLKKSSDSMLVYFNKARSISHQLAQMDRPISDEDLVFHILQGLPAEYNAFKTSV 1195
            +   L   KK S SM+ Y  K +  +  LA +  P+S++D V ++L GL ++YNA  T++
Sbjct: 139  LRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDYNAVVTAI 198

Query: 1194 ITQQLKNDNLITTAELLGMLLSEEARVFSESKINLTTAS 1078
              +    D+ I+   +  MLL+ E R+  +S I   +A+
Sbjct: 199  NIR----DDKISLEAIHSMLLAFEHRLEQQSSIEQMSAN 233


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score =  164 bits (416), Expect = 2e-37
 Identities = 97/273 (35%), Positives = 141/273 (51%), Gaps = 10/273 (3%)
 Frame = -2

Query: 790  ECQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSP 611
            +CQIC K GH + EC +R+   DN        ++ +     D      P+A         
Sbjct: 313  QCQICCKIGHVATECWHRF---DNQFQPKASHSNQFSSSAQD------PQALMAAPGLLG 363

Query: 610  STSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTF 431
             T   W  D+GATHH+TS+L NL++H+ + G D V VGNG GL + H G S I       
Sbjct: 364  ETP--WFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQGAL 421

Query: 430  TLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLG 251
             L NVLHVP I  NL+SV +   +NN + EF+   F VKD  T  +LL G +  GLY + 
Sbjct: 422  LLKNVLHVPKIAANLVSVQKLCHDNNAYVEFYPSYFAVKDQKTQAILLKGGLDKGLYSVP 481

Query: 250  FTFA---------QLKQALTSTA-PSSSTWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQN 101
              ++         Q+    +ST+  S   WHN+LGHP+   +  VL+  +  +    ++ 
Sbjct: 482  SAYSSHAPQARVFQIFSTSSSTSIDSMRLWHNRLGHPSLAIVNKVLNHYNLPVFSLQNKL 541

Query: 100  ICSACQLAKNHALPFPTSSKSVYGPLDLIHSDV 2
            +C +CQLAK+H LPF  +      P DL+H+D+
Sbjct: 542  LCDSCQLAKSHKLPFVRNYSKAMKPFDLVHADL 574


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  164 bits (414), Expect = 4e-37
 Identities = 94/265 (35%), Positives = 139/265 (52%), Gaps = 3/265 (1%)
 Frame = -2

Query: 787  CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 608
            CQ+C K GH++ +C YR+                       D  Y   E       NS  
Sbjct: 284  CQVCFKRGHTAADCWYRF-----------------------DEDYVADEKLVAAATNSYG 320

Query: 607  TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 428
              + W  D+GAT HIT  L  L    +Y G + +   +G+G++ISHIG +I+   +    
Sbjct: 321  IDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIH 380

Query: 427  LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLGF 248
            L+NVL+VP   +NLIS  Q + +N+ F E H   F +KD  T  VLL G  R GLY +  
Sbjct: 381  LNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPK 440

Query: 247  TFAQL--KQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVHEVLD-DHLSQNICSACQLA 77
            +F +   KQAL +   S S WH++LGHP+   +K V+S  +     + ++Q++C+ACQ A
Sbjct: 441  SFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEA 500

Query: 76   KNHALPFPTSSKSVYGPLDLIHSDV 2
            K+H LP+  S+     PL+L+ SDV
Sbjct: 501  KSHQLPYIRSTSVSQFPLELVFSDV 525


>ref|XP_012079749.1| PREDICTED: uncharacterized protein LOC105640134 [Jatropha curcas]
          Length = 719

 Score =  164 bits (414), Expect = 4e-37
 Identities = 88/209 (42%), Positives = 129/209 (61%), Gaps = 3/209 (1%)
 Frame = -2

Query: 619 NSPSTSSG-WVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHD 443
           +SP+TS+  W+ DSG THH+TS L NL +HSEY G D V + NG  L IS+IG++ +  +
Sbjct: 265 SSPTTSNKPWIMDSGTTHHLTSELENLGIHSEYSGTDEVTLTNGKSLPISNIGSTALTLN 324

Query: 442 NYTFTLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGL 263
           ++ F+L N+LHVP    NL+SV QFS  N+   EF  + F +KD+ T ++L  G V+DGL
Sbjct: 325 SHNFSLDNILHVPESNTNLLSVRQFSISNDVSLEFFPNFFVIKDLRTRQLLHKGQVKDGL 384

Query: 262 YHLGFTFAQLKQAL--TSTAPSSSTWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQNICSA 89
           YHL      +  A+       S STWH++LGH   +T+  VL L +      +++++C  
Sbjct: 385 YHL------VSDAIPPACNLVSLSTWHDRLGHACSRTINKVLLLNNLSASGSMNKSLCET 438

Query: 88  CQLAKNHALPFPTSSKSVYGPLDLIHSDV 2
           C ++K+H LPF  SS     PL+LI SD+
Sbjct: 439 CCVSKSHKLPFFDSSFVAKEPLELICSDL 467



 Score = 68.2 bits (165), Expect(2) = 2e-19
 Identities = 40/124 (32%), Positives = 62/124 (50%)
 Frame = -1

Query: 1739 KLTSTNYPLWKSQIVPLQRSYNLFIFVDGSFHCLVKYYRKTSPAGQEIVSKEGFVDSDPD 1560
            KLTS+NY LWK+Q+VPL     LF  VDGS          TSP  +        +++ P 
Sbjct: 18   KLTSSNYILWKTQLVPLLYGQQLFHHVDGSV---------TSPPKE--------INNSP- 59

Query: 1559 NEFVFNPLYNYWVNQDQAILSWLFSACVKETHSQVIDCTFSHKIWVRLEHNYNATMKSRL 1380
                 NP Y  W  +DQ +L W+ S+  +   SQV+    ++  W RL+  Y +  ++++
Sbjct: 60   -----NPAYQEWFIKDQTVLGWILSSLSESVLSQVVGANTAYAAWSRLQTTYASGSRAQI 114

Query: 1379 MQLK 1368
              +K
Sbjct: 115  RTIK 118



 Score = 58.2 bits (139), Expect(2) = 2e-19
 Identities = 34/92 (36%), Positives = 57/92 (61%)
 Frame = -3

Query: 1383 IDAIETNLVHLKKSSDSMLVYFNKARSISHQLAQMDRPISDEDLVFHILQGLPAEYNAFK 1204
            I  I+  L  L + +D +  Y ++A+ +  QL  +D PIS++DL+ HIL+GL ++Y  F 
Sbjct: 114  IRTIKNALHSLSRDTDPIATYMSRAKQLFDQLVALDAPISEDDLIDHILRGLGSDYRPF- 172

Query: 1203 TSVITQQLKNDNLITTAELLGMLLSEEARVFS 1108
            T  I  +L++   I+  +L G+LLSEE ++ S
Sbjct: 173  TRNIEARLQS---ISFDDLFGLLLSEEMQLQS 201


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  164 bits (414), Expect = 4e-37
 Identities = 94/265 (35%), Positives = 139/265 (52%), Gaps = 3/265 (1%)
 Frame = -2

Query: 787  CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 608
            CQ+C K GH++ +C YR+                       D  Y   E       NS  
Sbjct: 284  CQVCFKRGHTAADCWYRF-----------------------DEDYVADEKLVAAATNSYG 320

Query: 607  TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 428
              + W  D+GAT HIT  L  L    +Y G + +   +G+G++ISHIG +I+   +    
Sbjct: 321  IDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIH 380

Query: 427  LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLGF 248
            L+NVL+VP   +NLIS  Q + +N+ F E H   F +KD  T  VLL G  R GLY +  
Sbjct: 381  LNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPK 440

Query: 247  TFAQL--KQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVHEVLD-DHLSQNICSACQLA 77
            +F +   KQAL +   S S WH++LGHP+   +K V+S  +     + ++Q++C+ACQ A
Sbjct: 441  SFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEA 500

Query: 76   KNHALPFPTSSKSVYGPLDLIHSDV 2
            K+H LP+  S+     PL+L+ SDV
Sbjct: 501  KSHQLPYIRSTSVSQFPLELVFSDV 525


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  164 bits (414), Expect = 4e-37
 Identities = 89/267 (33%), Positives = 139/267 (52%), Gaps = 4/267 (1%)
 Frame = -2

Query: 790  ECQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSP 611
            +CQ+C K GH+  +C YRY  ++N++    +  +A                       S 
Sbjct: 278  KCQLCYKRGHTVCDCWYRY--DENFVPDERFAGTAV----------------------SY 313

Query: 610  STSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTF 431
               + W  D+GAT H+T  L  L +  +Y G+D V   +G+G+ ISHIG S++K  +   
Sbjct: 314  GVDTNWYLDTGATDHVTGELDKLTVRDKYHGNDQVHTASGAGMEISHIGNSVVKTPSRNL 373

Query: 430  TLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLG 251
             L +VL+VP   +NL+S ++ + +N  F E +   F++KD+   + LL G    GLY L 
Sbjct: 374  HLKDVLYVPKANKNLVSAYKLTSDNLAFIELYRKFFFIKDLAMRRTLLRGRCHKGLYALP 433

Query: 250  FTFA---QLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVH-EVLDDHLSQNICSACQ 83
               +   Q+KQ    T PS   WH++LGHP+Y  ++ V+   +   LD     ++C ACQ
Sbjct: 434  SPSSHHHQVKQVYGVTKPSFERWHSRLGHPSYTVVEKVIKSQNLPCLDVSEQVSVCDACQ 493

Query: 82   LAKNHALPFPTSSKSVYGPLDLIHSDV 2
             AK+H L FP S+     PL+L+ SDV
Sbjct: 494  KAKSHQLSFPKSTSESKYPLELVFSDV 520


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  163 bits (412), Expect = 7e-37
 Identities = 97/273 (35%), Positives = 146/273 (53%), Gaps = 7/273 (2%)
 Frame = -2

Query: 799  YYIECQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDF----WYPEPEAFA 632
            Y   CQIC   GHS++ C        +   Q+    S YP + Y       W P      
Sbjct: 250  YQGRCQICGVHGHSARRCSQFQPYGGSGGSQS--VPSGYPTNGYSPSPMAPWQPRA---- 303

Query: 631  VYNENSPSTSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSII 452
              N  +    + WV DSGATHH+TS+L NL+MH  Y G + V + +GSGL ISH G++++
Sbjct: 304  --NIATAPPFNPWVLDSGATHHLTSDLANLSMHQPYTGGEEVTIADGSGLPISHTGSALL 361

Query: 451  KHDNYTFTLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVR 272
               + +  L ++L+VP++++NLISV++    N    EF    F VKD+NT   LL G  R
Sbjct: 362  PTPSRSLALKDILYVPNVSKNLISVYRLCNANQVSVEFFPAHFQVKDLNTGARLLQGRTR 421

Query: 271  DGLYHLGFTFAQLKQALTSTAPSS--STWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQNI 98
            + LY        +     S +P +  S+WH +LGHPA   LK+V+S  H  L + + + +
Sbjct: 422  NELYEWPVNQKSITILTASPSPKTDLSSWHQRLGHPALPILKDVVSHFHLPLSNTIPKQL 481

Query: 97   -CSACQLAKNHALPFPTSSKSVYGPLDLIHSDV 2
             CS C + K+H LPF T++     PL+ +++DV
Sbjct: 482  PCSDCSINKSHKLPFFTNTIVSSQPLEYLYTDV 514


>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
          Length = 1087

 Score =  163 bits (412), Expect = 7e-37
 Identities = 92/264 (34%), Positives = 135/264 (51%), Gaps = 2/264 (0%)
 Frame = -2

Query: 787  CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 608
            CQ+C K GH+   C  R+               ++ G+D   F     +A +    +S  
Sbjct: 260  CQLCGKEGHTVHTCWKRF-------------DRSFSGNDVI-FQQHHQQAKSASAVSSYG 305

Query: 607  TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 428
              + W  D+ AT HIT  L  L     Y G++ V   N +G++ISHIG +I    N    
Sbjct: 306  VDTNWYLDTAATDHITGELKKLTTKERYHGNEQVHAANSAGMSISHIGRTIFHTPNRNLA 365

Query: 427  LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLY--HL 254
            L+NVL++P   +NL+S H+ + +N+ F E H   F VKD  T   LL G  R GLY   L
Sbjct: 366  LNNVLYIPKAKKNLVSAHRLAYDNHAFVEIHPKFFCVKDQTTKSTLLQGRSRGGLYPIPL 425

Query: 253  GFTFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQNICSACQLAK 74
              T  Q +QAL ST+ + S WH++LGHP++  +  VL   +  + +   + +C ACQ AK
Sbjct: 426  KSTTPQGRQALVSTSSAESRWHSRLGHPSFSVVSRVLRKHNIPVSESREERVCDACQQAK 485

Query: 73   NHALPFPTSSKSVYGPLDLIHSDV 2
            +H LP+  S      PL+L+ SDV
Sbjct: 486  SHQLPYSRSVSRSSAPLELVFSDV 509


>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1241

 Score =  163 bits (412), Expect = 7e-37
 Identities = 96/263 (36%), Positives = 136/263 (51%), Gaps = 1/263 (0%)
 Frame = -2

Query: 787 CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 608
           CQ+C+K GH + EC +RY                      D+ + P+  + A        
Sbjct: 270 CQVCLKRGHVAAECWHRY----------------------DETYVPDERSAAAAAAYGID 307

Query: 607 TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 428
           T+  W  D+GAT HIT+ L  L++  +Y+G D +   +G+G+ I HIG S+I        
Sbjct: 308 TN--WYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIKHIGDSVIHTPTRELH 365

Query: 427 LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLGF 248
           L N+LHVP   +NLIS H+ + +N  F E H + F +KD  T   +L G  R  LY L  
Sbjct: 366 LKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRVTRNTILKGRCRRRLYSLPT 425

Query: 247 TFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQ-NICSACQLAKN 71
           + A  KQ   +T PS S WH++LGHPA   +  VLS  +       ++ +IC ACQ  K+
Sbjct: 426 SPA--KQVHAATTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKS 483

Query: 70  HALPFPTSSKSVYGPLDLIHSDV 2
           H LP+P SS     PL+LI SDV
Sbjct: 484 HQLPYPKSSSVSSQPLELIFSDV 506


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  163 bits (412), Expect = 7e-37
 Identities = 92/263 (34%), Positives = 136/263 (51%), Gaps = 1/263 (0%)
 Frame = -2

Query: 787 CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 608
           CQ+C K GH   +C + Y  +D+++  A    +A  G D                     
Sbjct: 276 CQLCSKVGHVVADCWHCY--DDSFVPDARVAAAASYGVD--------------------- 312

Query: 607 TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 428
             S W  D+GAT HIT+ L  L     Y G + +   +GSG++I HIG S I+       
Sbjct: 313 --SNWYVDTGATDHITNELEKLTTRDRYNGKEQIHTASGSGMDIKHIGQSTIRTPTRNLY 370

Query: 427 LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLGF 248
           L N+LHVP   +NLIS H+ + +N+ F E H   F +KD  T   LL GP  +GLY L  
Sbjct: 371 LRNILHVPRTKKNLISAHRLAVDNHAFVEVHPRFFAIKDQITKNTLLRGPCCNGLYPLPA 430

Query: 247 TFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVH-EVLDDHLSQNICSACQLAKN 71
           + +  KQ L +  P+ S WH++LGHP+++ ++ V+S  +   L +     +C ACQ  K+
Sbjct: 431 STSSSKQVLGAIKPTVSIWHSRLGHPSWQIVQKVVSHNNLPCLGESKELGVCDACQKGKS 490

Query: 70  HALPFPTSSKSVYGPLDLIHSDV 2
           H LPF  S+ +   PL+L+ SDV
Sbjct: 491 HQLPFLKSTSASNFPLELVFSDV 513


>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
          Length = 1131

 Score =  163 bits (412), Expect = 7e-37
 Identities = 92/264 (34%), Positives = 135/264 (51%), Gaps = 2/264 (0%)
 Frame = -2

Query: 787  CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 608
            CQ+C K GH+   C  R+               ++ G+D   F     +A +    +S  
Sbjct: 260  CQLCGKEGHTVHTCWKRF-------------DRSFSGNDVI-FQQHHQQAKSASAVSSYG 305

Query: 607  TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 428
              + W  D+ AT HIT  L  L     Y G++ V   N +G++ISHIG +I    N    
Sbjct: 306  VDTNWYLDTAATDHITGELKKLTTKERYHGNEQVHAANSAGMSISHIGRTIFHTPNRNLA 365

Query: 427  LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLY--HL 254
            L+NVL++P   +NL+S H+ + +N+ F E H   F VKD  T   LL G  R GLY   L
Sbjct: 366  LNNVLYIPKAKKNLVSAHRLAYDNHAFVEIHPKFFCVKDQTTKSTLLQGRSRGGLYPIPL 425

Query: 253  GFTFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQNICSACQLAK 74
              T  Q +QAL ST+ + S WH++LGHP++  +  VL   +  + +   + +C ACQ AK
Sbjct: 426  KSTTPQGRQALVSTSSAESRWHSRLGHPSFSVVSRVLRKHNIPVSESREERVCDACQQAK 485

Query: 73   NHALPFPTSSKSVYGPLDLIHSDV 2
            +H LP+  S      PL+L+ SDV
Sbjct: 486  SHQLPYSRSVSRSSAPLELVFSDV 509