BLASTX nr result
ID: Papaver31_contig00039748
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00039748
(1034 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_013658112.1| PREDICTED: uncharacterized protein LOC106362... 57 3e-09
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 54 4e-08
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 54 1e-07
ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein A... 48 6e-07
ref|XP_009151561.1| PREDICTED: putative ribonuclease H protein A... 45 8e-07
ref|XP_010656238.1| PREDICTED: uncharacterized protein LOC104880... 47 2e-06
emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera] 49 4e-06
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 51 4e-06
ref|XP_009121302.1| PREDICTED: putative ribonuclease H protein A... 46 4e-06
ref|XP_010645576.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 47 5e-06
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 46 9e-06
ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein A... 48 9e-06
>ref|XP_013658112.1| PREDICTED: uncharacterized protein LOC106362816 [Brassica napus]
Length = 1707
Score = 56.6 bits (135), Expect(2) = 3e-09
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +1
Query: 133 LKSLARRLINRWGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKL 294
L LAR + WG + QRK H ++WDK ++K++G LG+R SK +NKALI+K+
Sbjct: 1155 LDRLARNFL--WGSSSDQRKLHLVAWDKVCQQKNEGGLGIRRSKEMNKALIAKV 1206
Score = 33.5 bits (75), Expect(2) = 3e-09
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 12 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRAN--LHHPSMPQVTR 146
SR+ WK + L+ AG+ TL SVL+ IP+ + L H ++ Q+ R
Sbjct: 1111 SRLTGWKSKTLSFAGRVTLTKSVLSSIPVHTMSTIMLPHSTLDQLDR 1157
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 53.5 bits (127), Expect(2) = 4e-08
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +1
Query: 166 WGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV**LIREANS 324
WG +QRKQH ISW + + +S+G LG+R ++ +NKAL+SK+ LI++ +S
Sbjct: 352 WGSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHS 404
Score = 32.7 bits (73), Expect(2) = 4e-08
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +3
Query: 12 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPSMPQVTRKKIDQPVGAF 176
+R+ WK RFL+ AG+ TL +VL+ IP+ + + ++P+ T +D+ +F
Sbjct: 299 TRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTI---ALPKSTLDGLDKVSRSF 350
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 53.5 bits (127), Expect(2) = 1e-07
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +1
Query: 106 VPTCIIPQCLKSLARRLINRWGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALI 285
+P ++ Q L ++R + WG +RKQH +SW K R K+ G LGLR+SK +N+AL+
Sbjct: 608 LPASLLEQ-LDKVSRNFL--WGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALL 664
Query: 286 SKL 294
+K+
Sbjct: 665 AKV 667
Score = 30.8 bits (68), Expect(2) = 1e-07
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 12 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPS 128
SR++ WK R L+ AG+ TL +VL IP+ +++ P+
Sbjct: 572 SRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPA 610
>ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1011
Score = 48.1 bits (113), Expect(2) = 6e-07
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +1
Query: 133 LKSLARRLINRWGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV**LIR 312
L SL+R + WG QH +SW+K + K++G LG+R S+ +NKALI+K+ L+R
Sbjct: 462 LDSLSRSFV--WGS-----GQHLVSWEKICKPKAEGGLGIRGSRDMNKALIAKVGWRLLR 514
Query: 313 EANS 324
+ S
Sbjct: 515 DTES 518
Score = 33.9 bits (76), Expect(2) = 6e-07
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = +3
Query: 12 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPSMPQVTRKKID 158
SR++ WKK+ L+ AG+ T+ +VL+ IP+ + + ++P T +K+D
Sbjct: 418 SRLSGWKKQTLSLAGRVTMTKAVLSSIPVHTMSTI---NLPVSTLEKLD 463
>ref|XP_009151561.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1204
Score = 45.1 bits (105), Expect(2) = 8e-07
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +1
Query: 133 LKSLARRLINRWGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKL 294
L SL+R + WG QH ISWD+ R K+ G LG+R S+ +NKAL++K+
Sbjct: 655 LDSLSRSFV--WGS-----GQHLISWDRVCRPKADGGLGIRVSRDMNKALLAKV 701
Score = 36.6 bits (83), Expect(2) = 8e-07
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 12 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPSMPQVTRKKID 158
SR++ WKK+ L+ AG+ T+ +VL+ IP+ + +H MP T K+D
Sbjct: 611 SRLSGWKKQTLSLAGRVTMTKAVLSSIPVHSMSTIH---MPVSTLDKLD 656
>ref|XP_010656238.1| PREDICTED: uncharacterized protein LOC104880636 [Vitis vinifera]
Length = 1106
Score = 47.0 bits (110), Expect(2) = 2e-06
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Frame = +1
Query: 136 KSLARRL--INR---WGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV 297
KS+A+RL + R WG + ++K H I W+ +KS+G LGLR LNKAL+ K V
Sbjct: 711 KSVAKRLDKVQRDFLWGGGSEEKKAHLIKWEAICEDKSKGGLGLRKLVFLNKALLGKWV 769
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +3
Query: 15 RVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPS---MPQVTRKKIDQ 161
R+ WK+++++ G+ TL+ SVLA +P ++H S MP+ K++D+
Sbjct: 674 RLARWKRQYISKGGRITLIRSVLASMP------IYHMSLFRMPKSVAKRLDK 719
>emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera]
Length = 1851
Score = 48.5 bits (114), Expect(2) = 4e-06
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Frame = +1
Query: 136 KSLARRL--INR---WGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV 297
KS+ARRL + R WG +++RK H I W+ +KS+G LGLR LNKAL+ K +
Sbjct: 1456 KSVARRLDKVQRDFLWGGGSAERKAHLIKWEAICEDKSKGGLGLRKLVLLNKALLGKWI 1514
Score = 30.8 bits (68), Expect(2) = 4e-06
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +3
Query: 15 RVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPS---MPQVTRKKIDQ 161
R+ WK+++++ G+ TL+ S LA +P ++H S MP+ +++D+
Sbjct: 1419 RLARWKRQYISKGGRITLIRSALASMP------IYHMSLFRMPKSVARRLDK 1464
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 51.2 bits (121), Expect(2) = 4e-06
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = +1
Query: 166 WGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV**LIREANS 324
WG ++KQH +SW K + K++G +GLRS++ +NKAL++K+ L+++ S
Sbjct: 690 WGSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKES 742
Score = 28.1 bits (61), Expect(2) = 4e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 12 SRVNSWKKRFLTHAGKPTLVHSVLALIPM 98
+R+ WK R L+ AG+ TL +VL+ IP+
Sbjct: 637 ARLAGWKGRSLSLAGRITLTKAVLSSIPV 665
>ref|XP_009121302.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 530
Score = 46.2 bits (108), Expect(2) = 4e-06
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +1
Query: 133 LKSLARRLINRWGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKL 294
L SL+R + WG QH +SWDK + K+ G LG+R S+ +NKALI+K+
Sbjct: 262 LDSLSRSFV--WGS-----GQHLVSWDKICKPKADGGLGIRVSREMNKALIAKV 308
Score = 33.1 bits (74), Expect(2) = 4e-06
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 12 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPSMPQVTRKKID 158
SR++ WKK+ L+ AG+ TL +VL+ IP+ + + +P T K+D
Sbjct: 218 SRLSGWKKQTLSLAGRVTLTKAVLSSIPVHQMSTI---CLPASTLDKLD 263
>ref|XP_010645576.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100855389 [Vitis vinifera]
Length = 1856
Score = 46.6 bits (109), Expect(2) = 5e-06
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Frame = +1
Query: 136 KSLARRL--INR---WGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV 297
KS+ARRL + R WG + ++K H I W+ +KS+G LGLR LNKAL+ K V
Sbjct: 489 KSVARRLDKVQRDFLWGGGSEEKKAHLIKWEAICGDKSKGGLGLRKLVLLNKALLGKWV 547
Score = 32.3 bits (72), Expect(2) = 5e-06
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +3
Query: 15 RVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPS---MPQVTRKKIDQ 161
R+ WK+++++ G+ TL+ SVLA +P ++H S MP+ +++D+
Sbjct: 452 RLARWKRQYISKGGRITLIRSVLASMP------IYHMSLFRMPKSVARRLDK 497
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 46.2 bits (108), Expect(2) = 9e-06
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +1
Query: 166 WGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV**LIREANS 324
WG ++KQH ++W+K K G LG+RSS+ +N AL++K+ L+++ +S
Sbjct: 282 WGSSTEKKKQHLLAWNKIYCTKQAGGLGIRSSRAMNTALLAKIGWRLLQDKSS 334
Score = 32.0 bits (71), Expect(2) = 9e-06
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 12 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPSMPQVTRKKIDQ 161
SR+ WK R L+ AG+ TL SVL+ IP+ + + ++P+ T D+
Sbjct: 229 SRLAGWKGRMLSLAGRLTLTKSVLSSIPIHTMSTI---ALPKATLDGFDR 275
>ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 782
Score = 48.1 bits (113), Expect(2) = 9e-06
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +1
Query: 133 LKSLARRLINRWGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV**LIR 312
L SL+R + WG QH +SW+K + K++G LG+R S+ +NKALI+K+ L+R
Sbjct: 233 LDSLSRSFV--WGS-----GQHLVSWEKICKPKAEGGLGIRGSRDMNKALIAKVGWRLLR 285
Query: 313 EANS 324
+ S
Sbjct: 286 DTES 289
Score = 30.0 bits (66), Expect(2) = 9e-06
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +3
Query: 12 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPSMPQVTRKKID 158
S ++ WKK+ L+ AG+ T +VL+ IP+ + + ++P T +K+D
Sbjct: 189 SLLSGWKKQTLSLAGRVTTTKAVLSSIPVHTMSTI---NLPVSTLEKLD 234