BLASTX nr result
ID: Papaver31_contig00039572
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00039572
(437 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC ... 225 1e-56
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 221 2e-55
ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC ... 219 8e-55
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ... 219 8e-55
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ... 217 3e-54
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas] 217 3e-54
gb|AKC88685.1| sigma factor [Francoa sonchifolia] 216 4e-54
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ... 216 5e-54
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ... 216 5e-54
ref|XP_013675845.1| PREDICTED: RNA polymerase sigma factor sigC-... 215 9e-54
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ... 215 1e-53
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 214 2e-53
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 214 3e-53
ref|XP_010427052.1| PREDICTED: RNA polymerase sigma factor sigC-... 213 3e-53
ref|XP_010427051.1| PREDICTED: RNA polymerase sigma factor sigC-... 213 3e-53
ref|XP_010504173.1| PREDICTED: RNA polymerase sigma factor sigC ... 213 3e-53
ref|XP_010504172.1| PREDICTED: RNA polymerase sigma factor sigC ... 213 3e-53
ref|XP_010504171.1| PREDICTED: RNA polymerase sigma factor sigC ... 213 3e-53
ref|XP_010504170.1| PREDICTED: RNA polymerase sigma factor sigC ... 213 3e-53
ref|XP_010504169.1| PREDICTED: RNA polymerase sigma factor sigC ... 213 3e-53
>ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC [Nelumbo nucifera]
gi|720088207|ref|XP_010244379.1| PREDICTED: RNA
polymerase sigma factor sigC [Nelumbo nucifera]
Length = 558
Score = 225 bits (573), Expect = 1e-56
Identities = 109/145 (75%), Positives = 128/145 (88%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
+R+++A+NESEMSR VKEV LERIR+ LEEE GRV SFSSWAEA +DEK L++RLHFG
Sbjct: 258 RRLMIARNESEMSRAVKEVSCLERIRSNLEEELGRVISFSSWAEAVGLDEKELQQRLHFG 317
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRDKLL+STRSLV++LARNYRG+GI+ EDLLQAG GVL GAER+DHTRGYRFSTYVQ
Sbjct: 318 WYCRDKLLRSTRSLVVYLARNYRGLGIAFEDLLQAGNFGVLQGAERFDHTRGYRFSTYVQ 377
Query: 77 YWIRKSMSAYVAQNSRGIQLPATLA 3
YWIRKSMS VAQ+SRG+ +P TL+
Sbjct: 378 YWIRKSMSTLVAQHSRGVHIPLTLS 402
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
tuberosum]
Length = 555
Score = 221 bits (563), Expect = 2e-55
Identities = 105/144 (72%), Positives = 129/144 (89%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +AKNE+EMSRGVK V LERIR++LEEETGRVA+FSSWAEAA I++K L++RLHFG
Sbjct: 256 KRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLHFG 315
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG GVL GA R+DHTRGY+FSTYVQ
Sbjct: 316 WYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQ 375
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKS+S VAQ++RG+++P T+
Sbjct: 376 YWIRKSLSKLVAQHARGVRIPFTI 399
>ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
tomentosiformis]
Length = 560
Score = 219 bits (557), Expect = 8e-55
Identities = 105/144 (72%), Positives = 128/144 (88%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +AKNE+EMSRGVK V LERIR++LEEETGRVASFSSWAEAA +++K L++RLHFG
Sbjct: 261 KRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFG 320
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG GVL GA R+D TRGY+FSTYVQ
Sbjct: 321 WYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQ 380
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKS+S VAQ++RGI++P T+
Sbjct: 381 YWIRKSLSKLVAQHARGIRIPFTI 404
>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
tomentosiformis]
Length = 572
Score = 219 bits (557), Expect = 8e-55
Identities = 105/144 (72%), Positives = 128/144 (88%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +AKNE+EMSRGVK V LERIR++LEEETGRVASFSSWAEAA +++K L++RLHFG
Sbjct: 273 KRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFG 332
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG GVL GA R+D TRGY+FSTYVQ
Sbjct: 333 WYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQ 392
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKS+S VAQ++RGI++P T+
Sbjct: 393 YWIRKSLSKLVAQHARGIRIPFTI 416
>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
Length = 606
Score = 217 bits (552), Expect = 3e-54
Identities = 102/145 (70%), Positives = 128/145 (88%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
+R+++A+NE+EMSRGVK + NLE+IRT LE+ETGR S S WAEAA +D K+L+++LHFG
Sbjct: 306 RRLMIARNEAEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFG 365
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+L++STRSLVLFLARNYRG+GI+LEDLLQAG GVL GAER+D RGYRFSTYVQ
Sbjct: 366 WYCRDELVRSTRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFSTYVQ 425
Query: 77 YWIRKSMSAYVAQNSRGIQLPATLA 3
YWIRKSMS V++++RGIQ+P TL+
Sbjct: 426 YWIRKSMSKIVSRHARGIQIPCTLS 450
>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
Length = 564
Score = 217 bits (552), Expect = 3e-54
Identities = 102/145 (70%), Positives = 128/145 (88%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
+R+++A+NE+EMSRGVK + NLE+IRT LE+ETGR S S WAEAA +D K+L+++LHFG
Sbjct: 264 RRLMIARNEAEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFG 323
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+L++STRSLVLFLARNYRG+GI+LEDLLQAG GVL GAER+D RGYRFSTYVQ
Sbjct: 324 WYCRDELVRSTRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFSTYVQ 383
Query: 77 YWIRKSMSAYVAQNSRGIQLPATLA 3
YWIRKSMS V++++RGIQ+P TL+
Sbjct: 384 YWIRKSMSKIVSRHARGIQIPCTLS 408
>gb|AKC88685.1| sigma factor [Francoa sonchifolia]
Length = 540
Score = 216 bits (551), Expect = 4e-54
Identities = 103/145 (71%), Positives = 128/145 (88%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
+R+++A+NE+EMSRGVK + +LERIRT LE+ETGRV S S+WAEAA IDEK+L + L +G
Sbjct: 238 RRLMIARNEAEMSRGVKVIQDLERIRTTLEKETGRVVSLSTWAEAAGIDEKVLNQDLRYG 297
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LL+STRSLVL+LARNYRG+GI+ EDLLQAG GVL GAER+DHTRGY+ STYVQ
Sbjct: 298 WYCRDELLRSTRSLVLYLARNYRGLGIASEDLLQAGKLGVLQGAERFDHTRGYKLSTYVQ 357
Query: 77 YWIRKSMSAYVAQNSRGIQLPATLA 3
YWIRKSMS VAQ++RG+Q+P TL+
Sbjct: 358 YWIRKSMSRMVAQHARGVQIPYTLS 382
>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
sylvestris]
Length = 554
Score = 216 bits (550), Expect = 5e-54
Identities = 104/144 (72%), Positives = 126/144 (87%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +AKNE+EMSRGVK V LERIR++LEEETGRVASFSSWAEAA +++K L+ LHFG
Sbjct: 255 KRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFG 314
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG GVL GA R+D TRGY+FSTYVQ
Sbjct: 315 WYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQ 374
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKS+S VAQ++RGI++P T+
Sbjct: 375 YWIRKSLSKLVAQHARGIRIPFTI 398
>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
sylvestris]
Length = 584
Score = 216 bits (550), Expect = 5e-54
Identities = 104/144 (72%), Positives = 126/144 (87%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +AKNE+EMSRGVK V LERIR++LEEETGRVASFSSWAEAA +++K L+ LHFG
Sbjct: 285 KRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFG 344
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG GVL GA R+D TRGY+FSTYVQ
Sbjct: 345 WYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQ 404
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKS+S VAQ++RGI++P T+
Sbjct: 405 YWIRKSLSKLVAQHARGIRIPFTI 428
>ref|XP_013675845.1| PREDICTED: RNA polymerase sigma factor sigC-like [Brassica napus]
Length = 564
Score = 215 bits (548), Expect = 9e-54
Identities = 102/144 (70%), Positives = 127/144 (88%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +++NESEMS+GVK V ++ERIRT LEEE+G+VAS S WAEAA ++EKLL LHFG
Sbjct: 263 KRERISRNESEMSQGVKIVADMERIRTKLEEESGKVASMSCWAEAAGMNEKLLMRNLHFG 322
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+L+KSTRSLVLFLARNYRG+GI+ EDL+QAGY GVL GAER+DHTRGY+FSTYVQ
Sbjct: 323 WYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQ 382
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKSMS V++++RG+ +PA++
Sbjct: 383 YWIRKSMSMMVSRHARGVHIPASI 406
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum lycopersicum]
Length = 551
Score = 215 bits (547), Expect = 1e-53
Identities = 101/144 (70%), Positives = 128/144 (88%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +AKNE+EMS+GVK V LERIR++LEEETG+VA+FSSWA+AA I++K L++ LHFG
Sbjct: 252 KRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSWAKAAGIEQKELQQHLHFG 311
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG GVL GA R+DHTRGY+FSTYVQ
Sbjct: 312 WYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQ 371
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKS+S VAQ++RG+++P T+
Sbjct: 372 YWIRKSLSKLVAQHARGVRIPFTI 395
>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
C, putative [Theobroma cacao]
Length = 848
Score = 214 bits (545), Expect = 2e-53
Identities = 102/145 (70%), Positives = 126/145 (86%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
+R+ +A+NE+EMS+GVK V NLERIRT LEEETGR AS S WAEAA + EK+L++ L FG
Sbjct: 548 RRLRIARNEAEMSKGVKVVANLERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFG 607
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LL+STRSLVL+ ARNYRG+GI+ EDL+QAG GVL GAER+DHTRGYRFSTYVQ
Sbjct: 608 WYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQ 667
Query: 77 YWIRKSMSAYVAQNSRGIQLPATLA 3
+WIRKS+S VA+++RGIQ+P TL+
Sbjct: 668 FWIRKSVSRIVARHARGIQVPCTLS 692
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 214 bits (544), Expect = 3e-53
Identities = 101/144 (70%), Positives = 126/144 (87%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR ++KNE+EMS GVK V ++ERIRT LEEE+G+VAS S WAEAA ++EKLL LH+G
Sbjct: 267 KRERISKNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYG 326
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY GVL GAER+DHTRGY+FSTYVQ
Sbjct: 327 WYCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQ 386
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKSMS V++++RG+ +P+++
Sbjct: 387 YWIRKSMSMMVSRHARGVHIPSSI 410
>ref|XP_010427052.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
[Camelina sativa]
Length = 563
Score = 213 bits (543), Expect = 3e-53
Identities = 101/144 (70%), Positives = 126/144 (87%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS S WAEAA ++EKLL LH+G
Sbjct: 262 KRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYG 321
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY GVL GAER+DHTRGY+FSTYVQ
Sbjct: 322 WYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTYVQ 381
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKSMS V++++RG+ +PA++
Sbjct: 382 YWIRKSMSMMVSRHARGVHIPASI 405
>ref|XP_010427051.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
[Camelina sativa]
Length = 572
Score = 213 bits (543), Expect = 3e-53
Identities = 101/144 (70%), Positives = 126/144 (87%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS S WAEAA ++EKLL LH+G
Sbjct: 271 KRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYG 330
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY GVL GAER+DHTRGY+FSTYVQ
Sbjct: 331 WYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTYVQ 390
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKSMS V++++RG+ +PA++
Sbjct: 391 YWIRKSMSMMVSRHARGVHIPASI 414
>ref|XP_010504173.1| PREDICTED: RNA polymerase sigma factor sigC isoform X5 [Camelina
sativa]
Length = 499
Score = 213 bits (543), Expect = 3e-53
Identities = 101/144 (70%), Positives = 126/144 (87%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS S WAEAA ++EKLL LH+G
Sbjct: 198 KRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYG 257
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY GVL GAER+DHTRGY+FSTYVQ
Sbjct: 258 WYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTYVQ 317
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKSMS V++++RG+ +PA++
Sbjct: 318 YWIRKSMSMMVSRHARGVHIPASI 341
>ref|XP_010504172.1| PREDICTED: RNA polymerase sigma factor sigC isoform X4 [Camelina
sativa]
Length = 560
Score = 213 bits (543), Expect = 3e-53
Identities = 101/144 (70%), Positives = 126/144 (87%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS S WAEAA ++EKLL LH+G
Sbjct: 259 KRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYG 318
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY GVL GAER+DHTRGY+FSTYVQ
Sbjct: 319 WYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTYVQ 378
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKSMS V++++RG+ +PA++
Sbjct: 379 YWIRKSMSMMVSRHARGVHIPASI 402
>ref|XP_010504171.1| PREDICTED: RNA polymerase sigma factor sigC isoform X3 [Camelina
sativa]
Length = 569
Score = 213 bits (543), Expect = 3e-53
Identities = 101/144 (70%), Positives = 126/144 (87%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS S WAEAA ++EKLL LH+G
Sbjct: 268 KRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYG 327
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY GVL GAER+DHTRGY+FSTYVQ
Sbjct: 328 WYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTYVQ 387
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKSMS V++++RG+ +PA++
Sbjct: 388 YWIRKSMSMMVSRHARGVHIPASI 411
>ref|XP_010504170.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Camelina
sativa]
Length = 573
Score = 213 bits (543), Expect = 3e-53
Identities = 101/144 (70%), Positives = 126/144 (87%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS S WAEAA ++EKLL LH+G
Sbjct: 272 KRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYG 331
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY GVL GAER+DHTRGY+FSTYVQ
Sbjct: 332 WYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTYVQ 391
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKSMS V++++RG+ +PA++
Sbjct: 392 YWIRKSMSMMVSRHARGVHIPASI 415
>ref|XP_010504169.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Camelina
sativa]
Length = 582
Score = 213 bits (543), Expect = 3e-53
Identities = 101/144 (70%), Positives = 126/144 (87%)
Frame = -1
Query: 437 KRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFG 258
KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS S WAEAA ++EKLL LH+G
Sbjct: 281 KRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYG 340
Query: 257 WYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQ 78
WYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY GVL GAER+DHTRGY+FSTYVQ
Sbjct: 341 WYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTYVQ 400
Query: 77 YWIRKSMSAYVAQNSRGIQLPATL 6
YWIRKSMS V++++RG+ +PA++
Sbjct: 401 YWIRKSMSMMVSRHARGVHIPASI 424