BLASTX nr result
ID: Papaver31_contig00038743
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00038743
(540 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas] 117 4e-24
ref|XP_013668797.1| PREDICTED: uncharacterized protein LOC106373... 116 6e-24
ref|XP_013658112.1| PREDICTED: uncharacterized protein LOC106362... 115 1e-23
ref|XP_010693613.1| PREDICTED: uncharacterized protein LOC104906... 112 1e-22
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 112 1e-22
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 112 1e-22
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 111 2e-22
ref|XP_013710279.1| PREDICTED: uncharacterized protein LOC106414... 110 3e-22
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 110 4e-22
ref|XP_013679846.1| PREDICTED: uncharacterized protein LOC106384... 110 5e-22
ref|XP_010667308.1| PREDICTED: uncharacterized protein LOC104884... 109 7e-22
ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 108 2e-21
ref|XP_009142123.1| PREDICTED: putative ribonuclease H protein A... 108 2e-21
ref|XP_010686678.1| PREDICTED: uncharacterized protein LOC104900... 107 5e-21
ref|XP_012832905.1| PREDICTED: uncharacterized protein LOC105953... 105 1e-20
ref|XP_009118154.1| PREDICTED: putative ribonuclease H protein A... 105 1e-20
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 104 2e-20
ref|XP_008393342.1| PREDICTED: putative ribonuclease H protein A... 103 4e-20
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 103 4e-20
ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein A... 103 5e-20
>gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]
Length = 1836
Score = 117 bits (292), Expect = 4e-24
Identities = 58/171 (33%), Positives = 91/171 (53%)
Frame = -2
Query: 515 LHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQGRASN 336
L+++S++ G +N +KS I PNL + N+ T YLG+ Q R S
Sbjct: 1177 LNTFSSTSGLQVNLSKSTIFCSPNLHAGLRKQIGDKMNIPTSDNLGTYLGIPMLQKRVSR 1236
Query: 335 QTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQIDRIT 156
TF+ +++++ +K W L AGR +L+++SL + MQ LP + +D+I
Sbjct: 1237 HTFSSVVEKMRKKLATWKASTLNMAGRRILVQSSLASVPTYTMQALALPVSTCNDVDKIC 1296
Query: 155 RDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
R+F WGH NTKK+H + + I +P GGLG+R + D N A L K W +
Sbjct: 1297 RNFLWGHTDNTKKIHTVNWSHICRPRQMGGLGLRTARDFNMAFLTKMAWQI 1347
>ref|XP_013668797.1| PREDICTED: uncharacterized protein LOC106373127 [Brassica napus]
Length = 1818
Score = 116 bits (291), Expect = 6e-24
Identities = 63/175 (36%), Positives = 98/175 (56%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQG 348
++ +L + + GQ +N KS I N+ + H +QT YLG+ Q
Sbjct: 1144 IRGVLERFCLASGQKVNLEKSKIFFSLNVSQEMGRMISHESGIQTTHDLGKYLGMPVLQK 1203
Query: 347 RASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQI 168
R + TF +L+R++ + GW +K L+ AGR+ L K+ L H M T LP + Q+
Sbjct: 1204 RINKDTFGEVLERVSSRLAGWKSKTLSFAGRVTLTKSVLSSIPVHTMSTIMLPQSTLDQL 1263
Query: 167 DRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
DR+ R+F WG +S+ +KLH + +DKI + +EGGLGIR+S + NKAL+ K W +
Sbjct: 1264 DRLARNFLWGSSSDQRKLHLVAWDKICQHKNEGGLGIRRSKEMNKALIAKVGWRV 1318
>ref|XP_013658112.1| PREDICTED: uncharacterized protein LOC106362816 [Brassica napus]
Length = 1707
Score = 115 bits (288), Expect = 1e-23
Identities = 61/175 (34%), Positives = 99/175 (56%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQG 348
++ +L + + GQ +N KS I N+ + H +Q+ YLG+ Q
Sbjct: 1036 IRGVLERFCLASGQKVNLEKSKIFFSLNVSQEMGRMISHESGIQSTHDLGKYLGMPVLQK 1095
Query: 347 RASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQI 168
R + TF +L+R++ + GW +K L+ AGR+ L K+ L H M T LP++ Q+
Sbjct: 1096 RINKDTFGEVLERVSSRLTGWKSKTLSFAGRVTLTKSVLSSIPVHTMSTIMLPHSTLDQL 1155
Query: 167 DRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
DR+ R+F WG +S+ +KLH + +DK+ + +EGGLGIR+S + NKAL+ K W +
Sbjct: 1156 DRLARNFLWGSSSDQRKLHLVAWDKVCQQKNEGGLGIRRSKEMNKALIAKVGWRV 1210
>ref|XP_010693613.1| PREDICTED: uncharacterized protein LOC104906541 [Beta vulgaris subsp.
vulgaris]
Length = 1067
Score = 112 bits (280), Expect = 1e-22
Identities = 60/175 (34%), Positives = 90/175 (51%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQG 348
++ +L Y GQL+N KS PN DPI F M YLG
Sbjct: 550 IREILDDYCRMSGQLVNYNKSAYQCSPNTDPILATSFTSFLRMGEACSLGKYLGCPIIDS 609
Query: 347 RASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQI 168
+ +N TF + +++ + W L+ AGR +LI+++L N+ MQ LP +I + +
Sbjct: 610 KVTNNTFGNIQEKVQGQLSKWKANSLSQAGRTVLIQSNLATKANYQMQCFLLPPHIVESL 669
Query: 167 DRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
D+ R+FFW +S +K + IG+DKI KP GGLG+RK+ N AL K +W +
Sbjct: 670 DKSYRNFFWNKSSESKSPNLIGWDKICKPKQNGGLGLRKAKVMNMALQFKLLWKI 724
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 112 bits (279), Expect = 1e-22
Identities = 56/177 (31%), Positives = 93/177 (52%)
Frame = -2
Query: 533 QHLKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFK 354
Q + + L S+S + G +N +KS++ N++ + + YLG+
Sbjct: 701 QIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPML 760
Query: 353 QGRASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHK 174
+ R S TF ++ ++ K W L AGR +L++ SL + MQ LP +
Sbjct: 761 KERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCN 820
Query: 173 QIDRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
+ID+ R+F WGH++NT+KLH + + +I KP +EGGLG+R + D N+A L K W +
Sbjct: 821 EIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQI 877
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 112 bits (279), Expect = 1e-22
Identities = 56/177 (31%), Positives = 93/177 (52%)
Frame = -2
Query: 533 QHLKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFK 354
Q + + L S+S + G +N +KS++ N++ + + YLG+
Sbjct: 701 QIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPML 760
Query: 353 QGRASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHK 174
+ R S TF ++ ++ K W L AGR +L++ SL + MQ LP +
Sbjct: 761 KERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCN 820
Query: 173 QIDRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
+ID+ R+F WGH++NT+KLH + + +I KP +EGGLG+R + D N+A L K W +
Sbjct: 821 EIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQI 877
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 111 bits (278), Expect = 2e-22
Identities = 56/177 (31%), Positives = 93/177 (52%)
Frame = -2
Query: 533 QHLKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFK 354
Q + + L S+S + G +N +KS++ N++ + + YLG+
Sbjct: 1233 QIMFDCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPML 1292
Query: 353 QGRASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHK 174
+ R S TF ++ ++ K W L AGR +L++ SL + MQ LP +
Sbjct: 1293 KERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCN 1352
Query: 173 QIDRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
+ID+ R+F WGH++NT+KLH + + +I KP +EGGLG+R + D N+A L K W +
Sbjct: 1353 EIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQI 1409
>ref|XP_013710279.1| PREDICTED: uncharacterized protein LOC106414114 [Brassica napus]
Length = 1895
Score = 110 bits (276), Expect = 3e-22
Identities = 59/175 (33%), Positives = 95/175 (54%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQG 348
++ +L + + GQ +N KSVI N+ N + + ++ + YLG+ Q
Sbjct: 1222 IRKVLERFCGASGQKVNLEKSVIFFSENIHRDLANSISNESGIKGTKELGKYLGMPVLQK 1281
Query: 347 RASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQI 168
R + +TF ++++++ K GW ++ L+ AGR+ L K+ L H M T +LP + Q+
Sbjct: 1282 RINKETFGEVIEKISSKLAGWKSRFLSLAGRITLTKSVLTSIPVHTMSTISLPISTLNQL 1341
Query: 167 DRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
D+I R F WG + +K H + +D I KP EGGLGIR + + N ALL K W L
Sbjct: 1342 DKIARGFIWGSSEGNRKQHLVSWDVICKPKREGGLGIRLAKEMNIALLAKLGWRL 1396
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 110 bits (275), Expect = 4e-22
Identities = 59/177 (33%), Positives = 97/177 (54%)
Frame = -2
Query: 533 QHLKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFK 354
+++ ++L +Y + GQ +N KS + + NL+P KIN LQ +T+ YLG+
Sbjct: 706 ENVMDILSTYEAASGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEKYLGLPTF 765
Query: 353 QGRASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHK 174
G + + F + R+ +K KGW K L+ AGR +LIK + MQ +P +I
Sbjct: 766 IGSSKKRVFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIID 825
Query: 173 QIDRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
I+++ R+FFWG +++ + ++K+ P EGGLGIR N+ALL K+ W +
Sbjct: 826 GIEKMCRNFFWGQKEEERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQAWRI 882
>ref|XP_013679846.1| PREDICTED: uncharacterized protein LOC106384431 [Brassica napus]
Length = 1854
Score = 110 bits (274), Expect = 5e-22
Identities = 59/175 (33%), Positives = 97/175 (55%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQG 348
++ +L + + GQ +N KS I N+ + H +Q+ YLG+ Q
Sbjct: 1163 IRGVLERFCIASGQKVNLEKSKIFFSLNVSREMGRMISHESGIQSTHDLGKYLGMPVLQK 1222
Query: 347 RASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQI 168
R + TF +L+R++ + GW +K L+ AGR+ L K+ L H M T LP + ++
Sbjct: 1223 RINKDTFGEVLERVSSRLTGWKSKTLSFAGRVTLTKSVLSSIPVHTMSTIMLPQSTLDRL 1282
Query: 167 DRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
DR+ +F WG +S+ +KLH + +DK+ + +EGGLGIR+S + NKAL+ K W +
Sbjct: 1283 DRLACNFLWGSSSDRRKLHLVAWDKVCQQKNEGGLGIRRSKEMNKALIAKVGWRV 1337
>ref|XP_010667308.1| PREDICTED: uncharacterized protein LOC104884364 [Beta vulgaris subsp.
vulgaris]
Length = 1286
Score = 109 bits (273), Expect = 7e-22
Identities = 58/179 (32%), Positives = 93/179 (51%)
Frame = -2
Query: 539 SNQHLKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQ 360
S + ++ +L +Y GQL+N KS PN DPI + M S YLG
Sbjct: 607 SCREIRGILDTYCRMSGQLVNYNKSAYQCSPNTDPILASAFAQVLQMGEASSLGKYLGCP 666
Query: 359 FKQGRASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNI 180
+ +N TF + +++ + W L+ AGR +LI+++L N+ MQ +LP +I
Sbjct: 667 IIDSKVTNNTFGEIQEKVQAQLSKWKANSLSQAGRTILIQSNLATKANYQMQCFSLPTHI 726
Query: 179 HKQIDRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
+D+ R+FFW + +K + IG++K+ K EGGLG+RK+ N AL K +W +
Sbjct: 727 LHSLDKSYRNFFWNKSPESKSPNLIGWEKVCKSKREGGLGLRKAKVMNMALQFKLLWKI 785
>ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103851737
[Brassica rapa]
Length = 1638
Score = 108 bits (270), Expect = 2e-21
Identities = 58/175 (33%), Positives = 95/175 (54%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQG 348
++ +L S+ + GQ ++ KS+I N+ + + H ++ YLG+ Q
Sbjct: 1125 IRKVLESFCGASGQKVSLEKSLIFFSENVHRDLASAISHESGIKGTKDLGKYLGMPVLQK 1184
Query: 347 RASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQI 168
R + +TF ++++++ K GW + L+ AGR+ L K+ L H M T LP++ Q+
Sbjct: 1185 RINKETFGAVIEKVSSKLAGWKRRFLSLAGRITLTKSVLSSVPVHTMSTIALPSSTLNQL 1244
Query: 167 DRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
D+I R F WG T+K H + ++KI KP EGGLGIR + + N ALL K W +
Sbjct: 1245 DKIARAFIWGSIDGTRKQHLVSWEKICKPKREGGLGIRLAKEMNVALLAKLGWRM 1299
>ref|XP_009142123.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 774
Score = 108 bits (269), Expect = 2e-21
Identities = 60/175 (34%), Positives = 94/175 (53%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQG 348
LK +L +Y + GQ IN KS I + ++ +Q YLG+ G
Sbjct: 129 LKTILQTYEEASGQCINAEKSAITFSKHTPADLKTLIKTSLQIQKEGGVGKYLGLPELFG 188
Query: 347 RASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQI 168
R F+ ++ R+ +KA+GW TK L+ AG+++++++ L P + + M LP ++ K+I
Sbjct: 189 RKKRDLFSSIVDRIKQKARGWSTKLLSSAGKMVMLQSVLSPISLYSMTCFKLPVSLCKRI 248
Query: 167 DRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
+ F+W +N N KK+ + +DKITKP S GGLG+R N ALL K W L
Sbjct: 249 QTVLMRFWWDNNENAKKMAWVAWDKITKPKSAGGLGMRDCQSFNDALLAKIGWRL 303
>ref|XP_010686678.1| PREDICTED: uncharacterized protein LOC104900847 [Beta vulgaris
subsp. vulgaris]
Length = 728
Score = 107 bits (266), Expect = 5e-21
Identities = 59/175 (33%), Positives = 90/175 (51%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQG 348
+K++L Y + GQL+N KS N+ +I Q NM S YLG
Sbjct: 173 IKSILDKYCSMSGQLVNFNKSAFQCTANVSDSEIEVFQEILNMDYSSSLDSYLGCPIIDR 232
Query: 347 RASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQI 168
R + +TF P++ ++ + W L+ AGR +LI+ +L N+ MQ+ LP I ++
Sbjct: 233 RVTKETFMPIVNKVQAQLPKWKANSLSQAGRAVLIQANLATKANYQMQSFLLPKTILNKL 292
Query: 167 DRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
D R+FFW + +K + IG+D+I P GGLG RK+ +N A MK +W L
Sbjct: 293 DSSYRNFFWNKENQSKSPNLIGWDRICTPKPFGGLGFRKADVNNIAHQMKLLWRL 347
>ref|XP_012832905.1| PREDICTED: uncharacterized protein LOC105953772 [Erythranthe
guttatus]
Length = 524
Score = 105 bits (263), Expect = 1e-20
Identities = 58/177 (32%), Positives = 97/177 (54%)
Frame = -2
Query: 533 QHLKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFK 354
Q+LKN+L+ Y+ GQ IN KS ++ P+ + + + + + + + IYLG+
Sbjct: 219 QNLKNILNQYARVSGQEINLDKSTLMFSPSTHQSRRDAIYNILGFKIVDRHEIYLGMPAS 278
Query: 353 QGRASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHK 174
G+ N+ F+ LL+R+ + KGW K L+ AG+ +LIK L ++IM LP + K
Sbjct: 279 MGKTRNEVFSYLLERVRTRIKGWEEKFLSKAGKEVLIKAVLQAIPSYIMSCFLLPLGLLK 338
Query: 173 QIDRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
+I+ + F+W N NTK + + ++ KP + GG+G R N A+L K+ W L
Sbjct: 339 EIESTIKRFWWS-NGNTKSMAWKSWREMCKPKNVGGMGFRDMESLNIAVLTKQAWRL 394
>ref|XP_009118154.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 538
Score = 105 bits (263), Expect = 1e-20
Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 1/176 (0%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDL-QHFFNMQTISKPPIYLGVQFKQ 351
L++LL+ Y + GQ IN KS I P ++ D+ + +Q YLG+ +
Sbjct: 129 LQSLLNRYELASGQTINKEKSAITFSRKA-PAELKDMVKQELQIQKEGGVGKYLGLPEQF 187
Query: 350 GRASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQ 171
GR FA +L R+ +KA+GW TK L+ AG+L++I++ L P ++ M LP ++ K+
Sbjct: 188 GRRKRDLFATILDRIQQKARGWSTKFLSSAGKLVMIQSVLSPIPSYSMTCFKLPVSLCKR 247
Query: 170 IDRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
I I F+W N N KK+ + +D+I KP S GGLG R N +LL K W +
Sbjct: 248 IQSIVTRFWWESNENEKKMAWVAWDRIAKPKSCGGLGFRDFQKFNDSLLAKIGWRM 303
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 104 bits (260), Expect = 2e-20
Identities = 58/175 (33%), Positives = 89/175 (50%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQG 348
L +LLH+Y + GQLIN KS I PN P + L + +S P YLG+
Sbjct: 1308 LSDLLHTYCIASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVVSDPGTYLGLPTFWH 1367
Query: 347 RASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQI 168
R+ + + + RK KGW L+ AG+ +LIK + M P+ + K++
Sbjct: 1368 RSKKKALGFIKDSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKEL 1427
Query: 167 DRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
+ I DF+WG N +T+ +H +D + +P +GG+G R D N +LL K+ W L
Sbjct: 1428 NGILADFWWG-NVDTRGIHWKSWDFLARPKKDGGMGFRNLEDFNNSLLAKQAWRL 1481
>ref|XP_008393342.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 749
Score = 103 bits (258), Expect = 4e-20
Identities = 54/175 (30%), Positives = 92/175 (52%)
Frame = -2
Query: 533 QHLKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFK 354
+++ ++L+ Y + GQ ++ KS + N P L M ++S P YLG+
Sbjct: 102 ENIMHILNKYCLASGQQVSLRKSSVYFGRNAPPQLRAQLSSILGMNSVSDPGDYLGLPAI 161
Query: 353 QGRASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHK 174
GR+ Q+ A L R+ K +GW L+ AG+ +LIK + ++ M P + K
Sbjct: 162 WGRSKRQSLAYLKGRMLGKVQGWKQSSLSLAGKEVLIKAVIQAIPSYPMNLFKFPKAVCK 221
Query: 173 QIDRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIW 9
+D I F+WG + +K+H + +D++++P +GGLG R D N ALL+K+ W
Sbjct: 222 DLDSIAARFWWGDSEARRKIHWMSWDQLSRPKCDGGLGFRNFQDFNDALLVKQCW 276
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 103 bits (258), Expect = 4e-20
Identities = 61/178 (34%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIK---INDLQHFFNMQTISKPPIYLGVQF 357
++ +L + + GQ ++ KS I N+ I+D + + + K YLG+
Sbjct: 224 IRRVLERFCVASGQKVSLEKSKIFFSENVSRDLGKLISDESGISSTRELGK---YLGMPV 280
Query: 356 KQGRASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIH 177
Q R + TF +L++L + GW + L+ AGR+ L K L H M T LP +
Sbjct: 281 LQRRINKDTFGDILEKLTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTL 340
Query: 176 KQIDRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
+D+++R F WG + +K H I + ++ KP SEGGLGIRK+ D NKALL K W L
Sbjct: 341 DGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRL 398
>ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 1235
Score = 103 bits (257), Expect = 5e-20
Identities = 57/175 (32%), Positives = 94/175 (53%)
Frame = -2
Query: 527 LKNLLHSYSTSVGQLINTTKSVIIHHPNLDPIKINDLQHFFNMQTISKPPIYLGVQFKQG 348
++ +L ++ + GQ ++ KSVI N+ + + ++ + YLG+ Q
Sbjct: 562 IRKVLENFCEASGQKVSLEKSVIFFSENVHRDLATLISNESGIKGTKELGKYLGMPVLQK 621
Query: 347 RASNQTFAPLLQRLARKAKGWMTKCLTPAGRLMLIKTSLIPTTNHIMQTQNLPNNIHKQI 168
+ + +TF ++++++ K GW K L+ AGR+ L K+ + H M T LP + Q+
Sbjct: 622 KINKETFGEVVEKVSSKLAGWKRKFLSLAGRITLTKSVISSIPVHTMSTIALPASTLGQL 681
Query: 167 DRITRDFFWGHNSNTKKLHPIGYDKITKPISEGGLGIRKSSDHNKALLMKRIWNL 3
D+I R F WG + +K H I ++KI P EGGLGIRK+ + N ALL K W L
Sbjct: 682 DKIARSFIWGSSEGNRKQHLIAWEKICTPKREGGLGIRKAKEMNVALLGKLGWRL 736