BLASTX nr result

ID: Papaver31_contig00038536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00038536
         (483 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010246557.1| PREDICTED: uncharacterized protein LOC104589...    75   2e-11
ref|XP_010262956.1| PREDICTED: uncharacterized protein LOC104601...    74   5e-11
ref|XP_007027924.1| COPII coat assembly protein SEC16, putative ...    59   1e-06
ref|XP_010654140.1| PREDICTED: uncharacterized protein LOC104880...    56   9e-06
emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]    56   9e-06

>ref|XP_010246557.1| PREDICTED: uncharacterized protein LOC104589812 [Nelumbo nucifera]
          Length = 170

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 57/105 (54%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
 Frame = -2

Query: 302 MGSEEVPVSSSIRRRNSFPSSMV--LDIPIQLQSSSYPNGDKVSSSL--DFEXXXXXXXX 135
           MGS +   SS++RRRNS  SS+   LD+P  L SSS+PNGDK SSSL  DFE        
Sbjct: 1   MGSIKPDTSSTLRRRNSIASSLPIKLDLPPVL-SSSFPNGDK-SSSLPNDFELVSL---- 54

Query: 134 XXXSQDEKYTSLKDLMPYSLSAV-QSPTGSMIQPCYEIPIRNRLV 3
               Q + YTSL+DLMP S  AV QSPTG   Q  YEI I+NRLV
Sbjct: 55  ----QSQTYTSLRDLMPSSPGAVVQSPTGPGSQSGYEISIKNRLV 95


>ref|XP_010262956.1| PREDICTED: uncharacterized protein LOC104601361 [Nelumbo nucifera]
          Length = 174

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 51/97 (52%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
 Frame = -2

Query: 278 SSSIRRRNSFPSSMV---LDIPIQLQSSSYPNGDKVSS-SLDFEXXXXXXXXXXXSQDEK 111
           SS +RRRNS  SS+V   LD+P Q  S    NGDK SS   DFE            + + 
Sbjct: 10  SSMLRRRNSISSSVVPTKLDLPAQSSSFPVVNGDKSSSLPTDFELVSL--------RSQT 61

Query: 110 YTSLKDLMPYSLSAV-QSPTGSMIQPCYEIPIRNRLV 3
           YTSLKDL+P S +AV QSPTG   Q CYEI IRNRLV
Sbjct: 62  YTSLKDLLPSSPAAVVQSPTGPGSQSCYEISIRNRLV 98


>ref|XP_007027924.1| COPII coat assembly protein SEC16, putative [Theobroma cacao]
           gi|508716529|gb|EOY08426.1| COPII coat assembly protein
           SEC16, putative [Theobroma cacao]
          Length = 241

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 52/129 (40%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
 Frame = -2

Query: 359 KRHVILPFSFFPLPYFCQTMGSE-EVPVSSSIRRRNSF------PSSMVLDIPIQLQSS- 204
           +R +   F  F LP    TM  E E P  S++ RRNS       P  + L  P  LQ++ 
Sbjct: 41  QRELTSHFHCFFLP--SSTMDDEPEQPPLSTLGRRNSISSPVQLPRRLTLLTPKPLQTAN 98

Query: 203 SYPNGDKVSSSLDFEXXXXXXXXXXXSQDEKYTSLKDLMPYSLSAVQSPT--GSMIQPCY 30
           S PNG   SS LD E                YTSLKD++P S  A+ SPT  GS     Y
Sbjct: 99  SLPNGSASSSPLDLELISLKTSLA------SYTSLKDILPSSAVAINSPTAAGSATNSGY 152

Query: 29  EIPIRNRLV 3
           EI IRNRLV
Sbjct: 153 EISIRNRLV 161


>ref|XP_010654140.1| PREDICTED: uncharacterized protein LOC104880160 [Vitis vinifera]
          Length = 184

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 48/114 (42%), Positives = 60/114 (52%), Gaps = 20/114 (17%)
 Frame = -2

Query: 284 PVSSSIRRRNSFPSSMV---LDIPIQLQSSSY---PNGDKVSSS------------LDFE 159
           P SS++RRRNS  ++ +   L +P +   SS    PNG +VSSS            +DFE
Sbjct: 12  PPSSNLRRRNSIGTAAIPTKLTLPSKAHYSSSFPRPNGVRVSSSTSSSSPQSSFPNVDFE 71

Query: 158 XXXXXXXXXXXSQDEKYTSLKDLMPYSLSAVQSPT--GSMIQPCYEIPIRNRLV 3
                       +   YTSLKDL+P S SA QSPT  G+    CYEI IRNRLV
Sbjct: 72  LISL--------KSLAYTSLKDLLP-STSAAQSPTAAGTGSGSCYEISIRNRLV 116


>emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]
          Length = 735

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 48/114 (42%), Positives = 60/114 (52%), Gaps = 20/114 (17%)
 Frame = -2

Query: 284 PVSSSIRRRNSFPSSMV---LDIPIQLQSSSY---PNGDKVSSS------------LDFE 159
           P SS++RRRNS  ++ +   L +P +   SS    PNG +VSSS            +DFE
Sbjct: 563 PPSSNLRRRNSIGTAAIPTKLTLPSKAHYSSSFPRPNGVRVSSSTSSSSPQSSFPNVDFE 622

Query: 158 XXXXXXXXXXXSQDEKYTSLKDLMPYSLSAVQSPT--GSMIQPCYEIPIRNRLV 3
                       +   YTSLKDL+P S SA QSPT  G+    CYEI IRNRLV
Sbjct: 623 LISL--------KSLAYTSLKDLLP-STSAAQSPTAAGTGSGSCYEISIRNRLV 667


Top