BLASTX nr result
ID: Papaver31_contig00037755
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00037755
(675 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010272143.1| PREDICTED: pentatricopeptide repeat-containi... 389 e-106
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi... 381 e-103
ref|XP_010037616.1| PREDICTED: pentatricopeptide repeat-containi... 379 e-103
ref|XP_009369399.1| PREDICTED: pentatricopeptide repeat-containi... 377 e-102
ref|XP_010087734.1| hypothetical protein L484_008930 [Morus nota... 376 e-102
ref|XP_008367545.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 376 e-102
ref|XP_008393129.1| PREDICTED: pentatricopeptide repeat-containi... 376 e-102
ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Popu... 376 e-102
ref|XP_010428477.1| PREDICTED: pentatricopeptide repeat-containi... 375 e-101
ref|XP_011028663.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
ref|XP_010471579.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
ref|XP_010471578.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
ref|XP_010471577.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
ref|XP_010416343.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
ref|XP_008239688.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis... 373 e-101
ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3... 373 e-101
ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2... 373 e-101
ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1... 373 e-101
>ref|XP_010272143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Nelumbo nucifera]
Length = 878
Score = 389 bits (999), Expect = e-106
Identities = 186/202 (92%), Positives = 197/202 (97%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF LV
Sbjct: 65 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALV 124
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIG+LGREGLLDKCAE+FDEMP HG
Sbjct: 125 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLDKCAEIFDEMPTHG 184
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
V+RSVFSFTALINAYGRNGQY+ SLELL+RMK ERISPSILTYNT+I++C RGGL+WEGL
Sbjct: 185 VARSVFSFTALINAYGRNGQYQTSLELLERMKRERISPSILTYNTVINSCARGGLEWEGL 244
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPDLVTYNTL
Sbjct: 245 LGLFAEMRHEGIQPDLVTYNTL 266
Score = 81.3 bits (199), Expect = 5e-13
Identities = 49/179 (27%), Positives = 84/179 (46%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
Y+Y VET KL L ++ + ++ N + + ++ + +A G + ++ +F+ M
Sbjct: 298 YTYLVETF-GKLEKLEKVSNLLKEMESEGNVPDITSYNVLLEAYAHSGSIKEAMGVFRQM 356
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 357 Q-SAGCMPNAATYSILLNLYGRHGRYDDVRELFLEMKVSNTEPDASTYNILIQVFGEGGY 415
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
++ + L + M E + P++ TY +I AC +GGL E + M G+ P Y
Sbjct: 416 FREVVTLFNDMVEENVEPNMETYEGLIFACGKGGLH-EDAKRILLHMNEKGVVPSSKAY 473
Score = 61.2 bits (147), Expect = 5e-07
Identities = 38/134 (28%), Positives = 66/134 (49%)
Frame = -2
Query: 404 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 225
+W+ L LF M+ + +P+ Y ++ G GL D+ +F M G+ + ++
Sbjct: 240 EWEGLLGLFAEMRHE-GIQPDLVTYNTLLCACGSRGLGDEAEMIFRTMNEAGIVPDINTY 298
Query: 224 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 45
T L+ +G+ + + LL M+SE P I +YN ++ A G E + G+F QM+
Sbjct: 299 TYLVETFGKLEKLEKVSNLLKEMESEGNVPDITSYNVLLEAYAHSGSIKEAM-GVFRQMQ 357
Query: 44 HDGIQPDLVTYNTL 3
G P+ TY+ L
Sbjct: 358 SAGCMPNAATYSIL 371
Score = 57.8 bits (138), Expect = 6e-06
Identities = 31/115 (26%), Positives = 60/115 (52%)
Frame = -2
Query: 347 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 168
P+ + YT ++ G+ L+K + + EM + G + S+ L+ AY +G K ++ +
Sbjct: 293 PDINTYTYLVETFGKLEKLEKVSNLLKEMESEGNVPDITSYNVLLEAYAHSGSIKEAMGV 352
Query: 167 LDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
+M+S P+ TY+ +++ R G ++ + LF +M+ +PD TYN L
Sbjct: 353 FRQMQSAGCMPNAATYSILLNLYGRHGR-YDDVRELFLEMKVSNTEPDASTYNIL 406
>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 381 bits (978), Expect = e-103
Identities = 182/202 (90%), Positives = 194/202 (96%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPKEL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF LV
Sbjct: 57 RAKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALV 116
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIG+LGREGLL+KC E+FDEMP+HG
Sbjct: 117 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHG 176
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
V+ SVFSFTALINAYGRNGQYK SLELLDRMK ER+SPSILTYNT+I++C RGGLDWE L
Sbjct: 177 VAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEEL 236
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFAQMRH+GIQ D+VTYNTL
Sbjct: 237 LGLFAQMRHEGIQADIVTYNTL 258
Score = 80.9 bits (198), Expect = 7e-13
Identities = 51/179 (28%), Positives = 85/179 (47%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YSY VET KL+ L + + ++ + + + ++ + AQ G + ++ +F+ M
Sbjct: 290 YSYLVETF-GKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQM 348
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN Y+I++ L GR G D ++F EM + ++ LIN +G G
Sbjct: 349 QGA-GCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGY 407
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
+K + L M E + P++ TY +I AC +GGL E + M G+ P Y
Sbjct: 408 FKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLH-EDAKKILLHMNEKGVVPSSKAY 465
Score = 61.2 bits (147), Expect = 5e-07
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Frame = -2
Query: 602 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 432
K +E+ PS V +S+ LIN S LD K + S+ +
Sbjct: 164 KCQEIFDEMPSHGVAPSVFSFTA--LINAYGRNGQYKSSLELLDRMKKERVSPSILTYNT 221
Query: 431 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 255
V A+ G DW+ L LF M+ + + + Y ++ R GL D+ VF M
Sbjct: 222 VINSCARGGLDWEELLGLFAQMRHE-GIQADIVTYNTLLSACARRGLGDEAEMVFRTMNE 280
Query: 254 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWE 75
G+ + +++ L+ +G+ + + ELL M+S P I +YN ++ A + G E
Sbjct: 281 GGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKE 340
Query: 74 GLLGLFAQMRHDGIQPDLVTYNTL 3
+G+F QM+ G P+ TY+ L
Sbjct: 341 A-MGVFRQMQGAGCVPNAATYSIL 363
>ref|XP_010037616.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Eucalyptus grandis]
gi|629082906|gb|KCW49351.1| hypothetical protein
EUGRSUZ_K02896 [Eucalyptus grandis]
Length = 861
Score = 379 bits (974), Expect = e-103
Identities = 181/202 (89%), Positives = 194/202 (96%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPKEL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 54 RAKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDMFKNKLSLNDFALV 113
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC E+FDEMP++G
Sbjct: 114 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCREIFDEMPSNG 173
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
VSRSVFS+TALINAYGRNGQY+VSLE L +MK ER+SPSILTYNT+I+AC RGGLDWEGL
Sbjct: 174 VSRSVFSYTALINAYGRNGQYEVSLEFLHQMKKERVSPSILTYNTVINACARGGLDWEGL 233
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
L LFA+MRH+GIQPDLVTYNTL
Sbjct: 234 LDLFAEMRHEGIQPDLVTYNTL 255
Score = 85.5 bits (210), Expect = 3e-14
Identities = 53/179 (29%), Positives = 85/179 (47%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YSY VET KL L + + ++ N + + ++ + +AQ G + S+ +F+ M
Sbjct: 287 YSYLVETF-GKLGKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQSGSIKESMDVFRQM 345
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN Y+I++ G+ G D E+F EM ++ LI +G G
Sbjct: 346 QAA-GCAPNAATYSILLNQYGKHGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGEGGY 404
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
+K + L + M E + P++ TY +I+AC RGGL +E + M GI P Y
Sbjct: 405 FKEVVTLFNDMVEENVEPNMETYEGLIYACGRGGL-YEDSKKILLHMNERGILPSSKVY 462
Score = 61.6 bits (148), Expect = 4e-07
Identities = 31/115 (26%), Positives = 64/115 (55%)
Frame = -2
Query: 347 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 168
P+ Y+ ++ G+ G L+K +E+ EM + G + S+ L+ AY ++G K S+++
Sbjct: 282 PDITTYSYLVETFGKLGKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQSGSIKESMDV 341
Query: 167 LDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
+M++ +P+ TY+ +++ + G ++ + LF +M+ +PD TYN L
Sbjct: 342 FRQMQAAGCAPNAATYSILLNQYGKHGR-YDDVRELFLEMKVSNTEPDAATYNIL 395
Score = 60.8 bits (146), Expect = 7e-07
Identities = 39/134 (29%), Positives = 66/134 (49%)
Frame = -2
Query: 404 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 225
DW+ L LF M+ + +P+ Y ++ GL D+ VF M GV + ++
Sbjct: 229 DWEGLLDLFAEMRHE-GIQPDLVTYNTLLSACSNRGLGDEAEMVFRTMNEGGVIPDITTY 287
Query: 224 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 45
+ L+ +G+ G+ + ELL M+S P I +YN ++ A + G E + +F QM+
Sbjct: 288 SYLVETFGKLGKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQSGSIKES-MDVFRQMQ 346
Query: 44 HDGIQPDLVTYNTL 3
G P+ TY+ L
Sbjct: 347 AAGCAPNAATYSIL 360
>ref|XP_009369399.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Pyrus x bretschneideri]
Length = 876
Score = 377 bits (968), Expect = e-102
Identities = 179/202 (88%), Positives = 192/202 (95%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPK+LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 63 RAKPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 122
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKCAEVFDEMP+ G
Sbjct: 123 FKEFASRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCAEVFDEMPSQG 182
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
V RSVFS+TALINAYGRNGQY+ SLE LDRMK +++SPSILTYN +++AC RGGLDWEGL
Sbjct: 183 VVRSVFSYTALINAYGRNGQYETSLEFLDRMKKDKVSPSILTYNIVLNACARGGLDWEGL 242
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPDLVTYNTL
Sbjct: 243 LGLFAEMRHEGIQPDLVTYNTL 264
Score = 81.3 bits (199), Expect = 5e-13
Identities = 52/179 (29%), Positives = 82/179 (45%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
Y Y VE KL L + + ++ N + + ++ + +AQ G + S+ +F+ M
Sbjct: 296 YRYLVEAF-GKLDKLERVSELLKEMEAGGNLTDITSYNVLLEAYAQLGSIRESMGVFRQM 354
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN Y+I++ L G G D E+F EM ++ LI +G G
Sbjct: 355 QAA-GCMPNAATYSILLNLYGSHGRYDDVRELFLEMKVSNTVPDAATYNILIQVFGAGGY 413
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
+K + L M E+I P++ TY +I+AC +GGL E + M GI P Y
Sbjct: 414 FKEVVTLFHDMVEEKIEPNMETYEGLIYACGKGGLH-EDSKKILLHMHEKGIVPSTQAY 471
>ref|XP_010087734.1| hypothetical protein L484_008930 [Morus notabilis]
gi|587839092|gb|EXB29767.1| hypothetical protein
L484_008930 [Morus notabilis]
Length = 905
Score = 376 bits (965), Expect = e-102
Identities = 178/202 (88%), Positives = 194/202 (96%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPKE+ILGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 69 RAKPKEVILGNPAVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 128
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDK AE+FDEMP+ G
Sbjct: 129 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKSAEIFDEMPSQG 188
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
V RSVFS+TALINAYGRNGQY+ SL+LLDRMK +++SP+ILTYNT+I+AC RGGLDWEGL
Sbjct: 189 VVRSVFSYTALINAYGRNGQYETSLQLLDRMKKDKVSPNILTYNTVINACARGGLDWEGL 248
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPDLVTYNTL
Sbjct: 249 LGLFAEMRHEGIQPDLVTYNTL 270
Score = 77.0 bits (188), Expect = 1e-11
Identities = 48/179 (26%), Positives = 84/179 (46%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YS VET KL L + + ++ N + + ++ + +A+ G ++ +F+ M
Sbjct: 302 YSCLVETF-GKLGKLEKVSELLKEMESRGNLPDITSYNVLLEAYAESGSISEAVGVFRQM 360
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN + Y+I++ L G++G + E+F EM ++ LI +G G
Sbjct: 361 QTA-GCLPNANTYSILLNLYGKQGRYEDVRELFLEMKVSNTEPDAATYNILIQVFGEGGY 419
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
+K + L M E + P++ TY +I AC +GGL + + + M GI P Y
Sbjct: 420 FKEVVTLFHDMVEENVEPNMETYEGLIIACGKGGLHGDAKI-ILNHMNEKGIVPSSKVY 477
Score = 67.8 bits (164), Expect = 6e-09
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 4/204 (1%)
Frame = -2
Query: 602 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD-VFKNKLSLN--DFVL 432
K E+ PS V + +SY LIN + + LD + K+K+S N +
Sbjct: 176 KSAEIFDEMPSQGVVRSVFSYTA--LINAYGRNGQYETSLQLLDRMKKDKVSPNILTYNT 233
Query: 431 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 255
V A+ G DW+ L LF M+ + +P+ Y ++G GL D+ VF M
Sbjct: 234 VINACARGGLDWEGLLGLFAEMRHE-GIQPDLVTYNTLLGACANRGLGDEAEMVFRTMNE 292
Query: 254 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWE 75
G+ + +++ L+ +G+ G+ + ELL M+S P I +YN ++ A G E
Sbjct: 293 GGIVPDITTYSCLVETFGKLGKLEKVSELLKEMESRGNLPDITSYNVLLEAYAESGSISE 352
Query: 74 GLLGLFAQMRHDGIQPDLVTYNTL 3
+G+F QM+ G P+ TY+ L
Sbjct: 353 A-VGVFRQMQTAGCLPNANTYSIL 375
>ref|XP_008367545.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g74850, chloroplastic-like, partial [Malus
domestica]
Length = 389
Score = 376 bits (965), Expect = e-102
Identities = 178/202 (88%), Positives = 192/202 (95%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPK+LILGNPSVT+EKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 67 RAKPKDLILGNPSVTLEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 126
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKCAEVFDEMP+ G
Sbjct: 127 FKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCAEVFDEMPSQG 186
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
V RSVFS+TALINAYGRNGQY+ SLE LDRMK +++ PSILTYNT+++AC RGGLDWEGL
Sbjct: 187 VVRSVFSYTALINAYGRNGQYETSLEFLDRMKKDKVPPSILTYNTVLNACARGGLDWEGL 246
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPDLVTYNTL
Sbjct: 247 LGLFAEMRHEGIQPDLVTYNTL 268
>ref|XP_008393129.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Malus domestica]
Length = 1062
Score = 376 bits (965), Expect = e-102
Identities = 178/202 (88%), Positives = 192/202 (95%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPK+LILGNPSVT+EKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 249 RAKPKDLILGNPSVTLEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 308
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKCAEVFDEMP+ G
Sbjct: 309 FKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCAEVFDEMPSQG 368
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
V RSVFS+TALINAYGRNGQY+ SLE LDRMK +++ PSILTYNT+++AC RGGLDWEGL
Sbjct: 369 VVRSVFSYTALINAYGRNGQYETSLEFLDRMKKDKVPPSILTYNTVLNACARGGLDWEGL 428
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPDLVTYNTL
Sbjct: 429 LGLFAEMRHEGIQPDLVTYNTL 450
Score = 85.9 bits (211), Expect = 2e-14
Identities = 53/179 (29%), Positives = 85/179 (47%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
Y Y VET KL L + + ++ N + + ++ + +A+ G + S+ +F+ M
Sbjct: 482 YRYLVETF-GKLDKLEKVSELLKEMEAGGNLPEITSYNVLLEAYAELGSIRESMGVFRQM 540
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 541 QAA-GCMPNAATYSILLNLYGRHGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGEGGY 599
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
+K + L M E+I P++ TY +I+AC +GGL E + M +GI P Y
Sbjct: 600 FKEVVTLFHDMVEEKIEPNMETYEGLIYACGKGGLH-EDSKKILLHMHENGIVPSTKAY 657
>ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Populus trichocarpa]
gi|550322283|gb|EEF06266.2| hypothetical protein
POPTR_0015s08030g [Populus trichocarpa]
Length = 866
Score = 376 bits (965), Expect = e-102
Identities = 177/202 (87%), Positives = 196/202 (97%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPKEL+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF LV
Sbjct: 54 RAKPKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALV 113
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFAQRGDWQRSLRLFK+MQRQIWCKPNEHIYTIMI LLGREGLL+KC+++F+EM AHG
Sbjct: 114 FKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHG 173
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
VSRSVFS+TALIN+YGRNG+Y+VSLELL+RMK ER+SPSILTYNT+I++C RGGLDWEGL
Sbjct: 174 VSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGL 233
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPD+VTYNTL
Sbjct: 234 LGLFAEMRHEGIQPDIVTYNTL 255
Score = 79.3 bits (194), Expect = 2e-12
Identities = 48/179 (26%), Positives = 88/179 (49%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
Y+Y V+T KL+ L + + + N ++ + ++ + +A+ G+ + + +F+ M
Sbjct: 287 YTYLVDTF-GKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q + C PN Y+I++GL G+ G D+ E+F EM ++ LI+ +G G
Sbjct: 346 Q-EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGY 404
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
+K + L M E + P++ TY +I AC +GGL + + M G+ P Y
Sbjct: 405 FKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLH-DDAKKILLHMSEKGMIPSSKAY 462
Score = 58.5 bits (140), Expect = 4e-06
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Frame = -2
Query: 638 RLISNSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLIN-KLSSLPPRGSIARCL-DVF 465
RL+ + P A+ ++LG + + G+Y E + K+S+ P + L DVF
Sbjct: 343 RLMQEAGCVPNAETYSILLG---LYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVF 399
Query: 464 KNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDK 285
+ V +F + A+ +PN Y +I G+ GL D
Sbjct: 400 GEGGYFKEVVTLFHDMAEEN-----------------VEPNMETYEGLIFACGKGGLHDD 442
Query: 284 CAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIH 105
++ M G+ S ++T +I AYG+ Y+ +L L+ M P+I TYNT+I+
Sbjct: 443 AKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIY 502
Query: 104 ACVRGGL 84
RGGL
Sbjct: 503 MFARGGL 509
Score = 57.8 bits (138), Expect = 6e-06
Identities = 40/134 (29%), Positives = 64/134 (47%)
Frame = -2
Query: 404 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 225
DW+ L LF M+ + +P+ Y ++ GL D+ VF M GV + ++
Sbjct: 229 DWEGLLGLFAEMRHE-GIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTY 287
Query: 224 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 45
T L++ +G+ + ELL M S P I +YN ++ A R G + E G+F M+
Sbjct: 288 TYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIG-NIEDATGVFRLMQ 346
Query: 44 HDGIQPDLVTYNTL 3
G P+ TY+ L
Sbjct: 347 EAGCVPNAETYSIL 360
>ref|XP_010428477.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Camelina sativa]
Length = 864
Score = 375 bits (963), Expect = e-101
Identities = 183/219 (83%), Positives = 199/219 (90%)
Frame = -2
Query: 659 FLRITQRRLISNSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIAR 480
FL R+ S S +AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIAR
Sbjct: 36 FLSGGNRKPCSFSSGKIKAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIAR 95
Query: 479 CLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGRE 300
CLD+FKNKLSLNDF LVFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGRE
Sbjct: 96 CLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGRE 155
Query: 299 GLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTY 120
GLLDKC EVFDEMP GVSRSVFS+TALINAYGRNG+Y+ SLELLDRMKSE+ISPSILTY
Sbjct: 156 GLLDKCLEVFDEMPGQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKSEKISPSILTY 215
Query: 119 NTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
NT+I+AC RGGLDWEGLLGLFA+MRH+GIQPD+VTYNTL
Sbjct: 216 NTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 254
Score = 70.1 bits (170), Expect = 1e-09
Identities = 43/155 (27%), Positives = 74/155 (47%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YS+ VET KL L + + + + + ++ + +A+ G + ++ +F M
Sbjct: 286 YSHLVETF-GKLRRLEKVSDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 344
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN + Y++++ L G+ G D ++F EM + ++ LI +G G
Sbjct: 345 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 403
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGL 84
+K + L M E I P + TY II AC +GGL
Sbjct: 404 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 438
>ref|XP_011028663.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Populus euphratica]
Length = 866
Score = 374 bits (961), Expect = e-101
Identities = 176/202 (87%), Positives = 195/202 (96%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPKEL+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF LV
Sbjct: 54 RAKPKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALV 113
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFAQRGDWQRSLRLFK+MQRQIWCKPNEHIYTIMI LLGREGLL+KC+++F+EM AHG
Sbjct: 114 FKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHG 173
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
VSRSVFS+TALIN+YGRNG+Y+VSLE L+RMK ER+SPSILTYNT+I++C RGGLDWEGL
Sbjct: 174 VSRSVFSYTALINSYGRNGKYEVSLEFLERMKKERVSPSILTYNTVINSCARGGLDWEGL 233
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPD+VTYNTL
Sbjct: 234 LGLFAEMRHEGIQPDIVTYNTL 255
Score = 77.0 bits (188), Expect = 1e-11
Identities = 44/155 (28%), Positives = 80/155 (51%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
Y+Y V+T KL+ L + + + N ++ + ++ + +A+ G+ + + +F+ M
Sbjct: 287 YTYLVDTF-GKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q + C PN Y+I++GL G+ D+ E+F EM ++ LI+ +G G
Sbjct: 346 Q-EAGCVPNAETYSILLGLYGKHERYDEVRELFLEMKVSDTEPDAATYNTLIDVFGEGGY 404
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGL 84
YK + L M E + P++ TY +I AC +GGL
Sbjct: 405 YKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGL 439
Score = 58.9 bits (141), Expect = 3e-06
Identities = 40/137 (29%), Positives = 68/137 (49%)
Frame = -2
Query: 419 FAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSR 240
F + G ++ + LF M + +PN Y +I G+ GL D ++ M G+
Sbjct: 399 FGEGGYYKEVVTLFHDMAEEN-VEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIP 457
Query: 239 SVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGL 60
S + T +I AYG+ Y+ +L +L+ M P+I TYNT+I+ RGGL ++ +
Sbjct: 458 SSKACTGVIEAYGQAAMYEEALVMLNTMNEMGSKPTIETYNTLIYMFARGGL-YKETEAI 516
Query: 59 FAQMRHDGIQPDLVTYN 9
+M G+ D ++N
Sbjct: 517 LLKMGDFGVARDRDSFN 533
Score = 57.8 bits (138), Expect = 6e-06
Identities = 40/134 (29%), Positives = 64/134 (47%)
Frame = -2
Query: 404 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 225
DW+ L LF M+ + +P+ Y ++ GL D+ VF M GV + ++
Sbjct: 229 DWEGLLGLFAEMRHE-GIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTY 287
Query: 224 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 45
T L++ +G+ + ELL M S P I +YN ++ A R G + E G+F M+
Sbjct: 288 TYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIG-NIEDATGVFRLMQ 346
Query: 44 HDGIQPDLVTYNTL 3
G P+ TY+ L
Sbjct: 347 EAGCVPNAETYSIL 360
>ref|XP_010471579.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X3 [Camelina sativa]
gi|727597185|ref|XP_010471580.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X4 [Camelina sativa]
Length = 863
Score = 374 bits (960), Expect = e-101
Identities = 178/202 (88%), Positives = 193/202 (95%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
+AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 52 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP G
Sbjct: 112 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPGQG 171
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
VSRSVFS+TALINAYGRNG+Y+ SLELLDRMKSE+ISPSILTYNT+I+AC RGGLDWEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKSEKISPSILTYNTVINACARGGLDWEGL 231
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPD+VTYNTL
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTL 253
Score = 70.1 bits (170), Expect = 1e-09
Identities = 43/155 (27%), Positives = 74/155 (47%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YS+ VET KL L + + + + + ++ + +A+ G + ++ +F M
Sbjct: 285 YSHLVETF-GKLRRLEKVSDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN + Y++++ L G+ G D ++F EM + ++ LI +G G
Sbjct: 344 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGL 84
+K + L M E I P + TY II AC +GGL
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
>ref|XP_010471578.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X2 [Camelina sativa]
Length = 863
Score = 374 bits (960), Expect = e-101
Identities = 178/202 (88%), Positives = 193/202 (95%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
+AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 52 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP G
Sbjct: 112 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPGQG 171
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
VSRSVFS+TALINAYGRNG+Y+ SLELLDRMKSE+ISPSILTYNT+I+AC RGGLDWEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKSEKISPSILTYNTVINACARGGLDWEGL 231
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPD+VTYNTL
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTL 253
Score = 70.5 bits (171), Expect = 9e-10
Identities = 43/155 (27%), Positives = 74/155 (47%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YS+ VET KL L + + + + + ++ + +A+ G + ++ +F M
Sbjct: 285 YSHLVETF-GKLGRLEKVSDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN + Y++++ L G+ G D ++F EM + ++ LI +G G
Sbjct: 344 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGL 84
+K + L M E I P + TY II AC +GGL
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Score = 58.2 bits (139), Expect = 5e-06
Identities = 29/115 (25%), Positives = 62/115 (53%)
Frame = -2
Query: 347 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 168
P+ Y+ ++ G+ G L+K +++ EM + G + S+ L+ AY ++G K ++ +
Sbjct: 280 PDLTTYSHLVETFGKLGRLEKVSDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 167 LDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
+M++ +P+ TY+ +++ + G ++ + LF +M+ PD TYN L
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGR-YDDVRQLFLEMKSSNTDPDAATYNIL 393
>ref|XP_010471577.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X1 [Camelina sativa]
Length = 863
Score = 374 bits (960), Expect = e-101
Identities = 178/202 (88%), Positives = 193/202 (95%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
+AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 52 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP G
Sbjct: 112 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPGQG 171
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
VSRSVFS+TALINAYGRNG+Y+ SLELLDRMKSE+ISPSILTYNT+I+AC RGGLDWEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKSEKISPSILTYNTVINACARGGLDWEGL 231
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPD+VTYNTL
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTL 253
Score = 70.5 bits (171), Expect = 9e-10
Identities = 43/155 (27%), Positives = 74/155 (47%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YS+ VET KL L + + + + + ++ + +A+ G + ++ +F M
Sbjct: 285 YSHLVETF-GKLGRLEKVSDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN + Y++++ L G+ G D ++F EM + ++ LI +G G
Sbjct: 344 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGL 84
+K + L M E I P + TY II AC +GGL
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Score = 58.2 bits (139), Expect = 5e-06
Identities = 29/115 (25%), Positives = 62/115 (53%)
Frame = -2
Query: 347 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 168
P+ Y+ ++ G+ G L+K +++ EM + G + S+ L+ AY ++G K ++ +
Sbjct: 280 PDLTTYSHLVETFGKLGRLEKVSDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 167 LDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
+M++ +P+ TY+ +++ + G ++ + LF +M+ PD TYN L
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGR-YDDVRQLFLEMKSSNTDPDAATYNIL 393
>ref|XP_010416343.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Camelina sativa]
Length = 863
Score = 374 bits (960), Expect = e-101
Identities = 178/202 (88%), Positives = 193/202 (95%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
+AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 52 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP G
Sbjct: 112 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPGQG 171
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
VSRSVFS+TALINAYGRNG+Y+ SLELLDRMKSE+ISPSILTYNT+I+AC RGGLDWEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKSEKISPSILTYNTVINACARGGLDWEGL 231
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPD+VTYNTL
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTL 253
Score = 72.4 bits (176), Expect = 2e-10
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFV---LVFKEFAQRGDWQRSLRLF 378
YS+ VET KL L G ++ L + SL D ++ + +A+ G + ++ +F
Sbjct: 285 YSHLVETF-GKLGRL---GKVSDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 377 KYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGR 198
MQ C PN + Y++++ L G+ G D ++F EM + ++ LI +G
Sbjct: 341 HQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 197 NGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGL 84
G +K + L M E I P + TY II AC +GGL
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Score = 61.6 bits (148), Expect = 4e-07
Identities = 32/112 (28%), Positives = 59/112 (52%)
Frame = -2
Query: 347 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 168
P+ Y +++ + G + + VF +M A G + + +++ L+N +G++G+Y +L
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 167 LDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
MKS P TYN +I GG ++ ++ LF M + I+PD+ TY
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGY-FKEVVTLFHDMVEENIEPDMETY 425
>ref|XP_008239688.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Prunus mume]
Length = 876
Score = 374 bits (960), Expect = e-101
Identities = 176/202 (87%), Positives = 193/202 (95%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPK+LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 63 RAKPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 122
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC+EVFD+MP+ G
Sbjct: 123 FKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCSEVFDDMPSQG 182
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
V RSVFS+TALINAYGRNGQY+ SL+ LDRMK +++SPSILTYNT+++AC RGGL+WEGL
Sbjct: 183 VVRSVFSYTALINAYGRNGQYETSLQFLDRMKKDKVSPSILTYNTVLNACARGGLEWEGL 242
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPDLVTYNTL
Sbjct: 243 LGLFAEMRHEGIQPDLVTYNTL 264
Score = 84.0 bits (206), Expect = 8e-14
Identities = 54/179 (30%), Positives = 83/179 (46%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
Y Y VET KL L + + ++ N + + ++ + +AQ G + S+ +F+ M
Sbjct: 296 YRYLVETF-GKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRESMGVFRQM 354
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 355 QAA-GCMPNAATYSILLNLYGRHGRYDDVRELFLEMKMSNTEPDPATYNILIQVFGEGGY 413
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
+K + L M E I P++ TY +I+AC +GGL E + M GI P Y
Sbjct: 414 FKEVVTLFHDMVEENIEPNMETYEGLIYACGKGGLH-EDAKNILLHMSEKGIVPSSKAY 471
>ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Fragaria vesca subsp. vesca]
Length = 862
Score = 374 bits (960), Expect = e-101
Identities = 175/202 (86%), Positives = 194/202 (96%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
RAKPK+LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 49 RAKPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 108
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFA RGDWQRSLRLFKYMQRQIWCKP+EHIYTIMI LLGREGLLDKCAE+FDEMP G
Sbjct: 109 FKEFAARGDWQRSLRLFKYMQRQIWCKPSEHIYTIMISLLGREGLLDKCAEIFDEMPTQG 168
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
V RSVFS+TALINAYGRNGQ+++SL+LLDRMK +++SP+ILTYNT+++AC RGGLDWEGL
Sbjct: 169 VIRSVFSYTALINAYGRNGQFEMSLQLLDRMKKDKVSPNILTYNTVLNACARGGLDWEGL 228
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+G+QPDLVTYNTL
Sbjct: 229 LGLFAEMRHEGVQPDLVTYNTL 250
Score = 83.2 bits (204), Expect = 1e-13
Identities = 52/179 (29%), Positives = 86/179 (48%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YSY VET KL++L + + ++ N + + ++ + +AQ G + ++ +F+ M
Sbjct: 282 YSYLVETF-GKLNNLEKVSELLKGMESGGNLPDITSYNVLLEAYAQLGSIKEAMGVFRQM 340
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q + C N Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 341 Q-EAGCMANAATYSILLNLYGRLGRYDDVRELFLEMKVSNAEPDAATYNILIQVFGEGGY 399
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
++ + L M E I P++ TY +I+AC +GGL E + M GI P Y
Sbjct: 400 FREVVTLFHDMVEENIEPNMETYEGLIYACGKGGLH-EDAKNILLHMNEKGIVPSSKAY 457
>ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535
DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical
protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally
active 2 [Arabidopsis thaliana]
Length = 862
Score = 373 bits (958), Expect = e-101
Identities = 177/202 (87%), Positives = 194/202 (96%)
Frame = -2
Query: 608 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 429
+AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 52 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111
Query: 428 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 249
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP+ G
Sbjct: 112 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQG 171
Query: 248 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWEGL 69
VSRSVFS+TALINAYGRNG+Y+ SLELLDRMK+E+ISPSILTYNT+I+AC RGGLDWEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 231
Query: 68 LGLFAQMRHDGIQPDLVTYNTL 3
LGLFA+MRH+GIQPD+VTYNTL
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTL 253
Score = 69.7 bits (169), Expect = 2e-09
Identities = 35/122 (28%), Positives = 62/122 (50%)
Frame = -2
Query: 449 LNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVF 270
+ + ++ + +A+ G + ++ +F MQ C PN + Y++++ L G+ G D ++F
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 269 DEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRG 90
EM + ++ LI +G G +K + L M E I P + TY II AC +G
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 89 GL 84
GL
Sbjct: 436 GL 437
Score = 61.6 bits (148), Expect = 4e-07
Identities = 32/112 (28%), Positives = 59/112 (52%)
Frame = -2
Query: 347 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 168
P+ Y +++ + G + + VF +M A G + + +++ L+N +G++G+Y +L
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 167 LDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTY 12
MKS P TYN +I GG ++ ++ LF M + I+PD+ TY
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGY-FKEVVTLFHDMVEENIEPDMETY 425
>ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3 [Theobroma cacao]
gi|508773301|gb|EOY20557.1| Plastid transcriptionally
active 2 isoform 3 [Theobroma cacao]
Length = 811
Score = 373 bits (958), Expect = e-101
Identities = 182/237 (76%), Positives = 204/237 (86%), Gaps = 13/237 (5%)
Frame = -2
Query: 674 LKKPSFLRITQRRLISNSIKPP-------------RAKPKELILGNPSVTVEKGKYSYDV 534
L +PS + +R+L SN I RAKP+EL+LGNPSVTVEKGKYSYDV
Sbjct: 12 LTQPSNFALNRRQLSSNRIFTGGNHSFLSGGAGICRAKPRELVLGNPSVTVEKGKYSYDV 71
Query: 533 ETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIW 354
ETLINKLSSLPPRGSIARCLDVF+NKLSLNDF LVFKEFA RGDWQRSLRLFKYMQRQIW
Sbjct: 72 ETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQRQIW 131
Query: 353 CKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSL 174
CKPNEHIYTIMI LLGREGLL+KC EVFDEMP+ GV+RSVF++TALINAYGRNG Y +SL
Sbjct: 132 CKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYNISL 191
Query: 173 ELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
ELLD+MK +++ PSILTYNT+I+AC RGGLDWEGLLGLFA+MRH+GIQPD+VTYNTL
Sbjct: 192 ELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 248
Score = 79.3 bits (194), Expect = 2e-12
Identities = 47/155 (30%), Positives = 77/155 (49%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YSY VE+ KL L + + ++ N + + ++ + +A+ G + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGL 84
+K + L M E I P++ TY+ +I AC +GGL
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGL 432
Score = 62.4 bits (150), Expect = 2e-07
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
Frame = -2
Query: 602 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 432
K +E+ PS V + ++Y LIN LD K S+ +
Sbjct: 154 KCREVFDEMPSQGVTRSVFAYTA--LINAYGRNGAYNISLELLDKMKKDKVLPSILTYNT 211
Query: 431 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 255
V A+ G DW+ L LF M+ + +P+ Y ++ GL ++ VF M
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNE 270
Query: 254 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWE 75
G+ + +++ L+ ++G+ G+ + ELL M+S P I++YN ++ A + G E
Sbjct: 271 GGILPDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKE 330
Query: 74 GLLGLFAQMRHDGIQPDLVTYNTL 3
+G+F QM+ G P+ TY+ L
Sbjct: 331 A-MGVFKQMQVAGCAPNATTYSIL 353
Score = 62.0 bits (149), Expect = 3e-07
Identities = 31/115 (26%), Positives = 62/115 (53%)
Frame = -2
Query: 347 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 168
P+ Y+ ++ G+ G L+K +E+ EM + G + S+ L+ AY ++G K ++ +
Sbjct: 275 PDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGV 334
Query: 167 LDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
+M+ +P+ TY+ +++ R G ++ + LF +M+ +PD TYN L
Sbjct: 335 FKQMQVAGCAPNATTYSILLNLYGRNGR-YDDVRELFLEMKESNTEPDAATYNIL 388
>ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2 [Theobroma cacao]
gi|508773300|gb|EOY20556.1| Plastid transcriptionally
active 2 isoform 2 [Theobroma cacao]
Length = 770
Score = 373 bits (958), Expect = e-101
Identities = 182/237 (76%), Positives = 204/237 (86%), Gaps = 13/237 (5%)
Frame = -2
Query: 674 LKKPSFLRITQRRLISNSIKPP-------------RAKPKELILGNPSVTVEKGKYSYDV 534
L +PS + +R+L SN I RAKP+EL+LGNPSVTVEKGKYSYDV
Sbjct: 12 LTQPSNFALNRRQLSSNRIFTGGNHSFLSGGAGICRAKPRELVLGNPSVTVEKGKYSYDV 71
Query: 533 ETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIW 354
ETLINKLSSLPPRGSIARCLDVF+NKLSLNDF LVFKEFA RGDWQRSLRLFKYMQRQIW
Sbjct: 72 ETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQRQIW 131
Query: 353 CKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSL 174
CKPNEHIYTIMI LLGREGLL+KC EVFDEMP+ GV+RSVF++TALINAYGRNG Y +SL
Sbjct: 132 CKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYNISL 191
Query: 173 ELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
ELLD+MK +++ PSILTYNT+I+AC RGGLDWEGLLGLFA+MRH+GIQPD+VTYNTL
Sbjct: 192 ELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 248
Score = 79.3 bits (194), Expect = 2e-12
Identities = 47/155 (30%), Positives = 77/155 (49%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YSY VE+ KL L + + ++ N + + ++ + +A+ G + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGL 84
+K + L M E I P++ TY+ +I AC +GGL
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGL 432
Score = 62.4 bits (150), Expect = 2e-07
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
Frame = -2
Query: 602 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 432
K +E+ PS V + ++Y LIN LD K S+ +
Sbjct: 154 KCREVFDEMPSQGVTRSVFAYTA--LINAYGRNGAYNISLELLDKMKKDKVLPSILTYNT 211
Query: 431 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 255
V A+ G DW+ L LF M+ + +P+ Y ++ GL ++ VF M
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNE 270
Query: 254 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWE 75
G+ + +++ L+ ++G+ G+ + ELL M+S P I++YN ++ A + G E
Sbjct: 271 GGILPDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKE 330
Query: 74 GLLGLFAQMRHDGIQPDLVTYNTL 3
+G+F QM+ G P+ TY+ L
Sbjct: 331 A-MGVFKQMQVAGCAPNATTYSIL 353
Score = 62.0 bits (149), Expect = 3e-07
Identities = 31/115 (26%), Positives = 62/115 (53%)
Frame = -2
Query: 347 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 168
P+ Y+ ++ G+ G L+K +E+ EM + G + S+ L+ AY ++G K ++ +
Sbjct: 275 PDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGV 334
Query: 167 LDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
+M+ +P+ TY+ +++ R G ++ + LF +M+ +PD TYN L
Sbjct: 335 FKQMQVAGCAPNATTYSILLNLYGRNGR-YDDVRELFLEMKESNTEPDAATYNIL 388
>ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1 [Theobroma cacao]
gi|508773299|gb|EOY20555.1| Plastid transcriptionally
active 2 isoform 1 [Theobroma cacao]
Length = 859
Score = 373 bits (958), Expect = e-101
Identities = 182/237 (76%), Positives = 204/237 (86%), Gaps = 13/237 (5%)
Frame = -2
Query: 674 LKKPSFLRITQRRLISNSIKPP-------------RAKPKELILGNPSVTVEKGKYSYDV 534
L +PS + +R+L SN I RAKP+EL+LGNPSVTVEKGKYSYDV
Sbjct: 12 LTQPSNFALNRRQLSSNRIFTGGNHSFLSGGAGICRAKPRELVLGNPSVTVEKGKYSYDV 71
Query: 533 ETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIW 354
ETLINKLSSLPPRGSIARCLDVF+NKLSLNDF LVFKEFA RGDWQRSLRLFKYMQRQIW
Sbjct: 72 ETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQRQIW 131
Query: 353 CKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSL 174
CKPNEHIYTIMI LLGREGLL+KC EVFDEMP+ GV+RSVF++TALINAYGRNG Y +SL
Sbjct: 132 CKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYNISL 191
Query: 173 ELLDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
ELLD+MK +++ PSILTYNT+I+AC RGGLDWEGLLGLFA+MRH+GIQPD+VTYNTL
Sbjct: 192 ELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 248
Score = 79.3 bits (194), Expect = 2e-12
Identities = 47/155 (30%), Positives = 77/155 (49%)
Frame = -2
Query: 548 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 369
YSY VE+ KL L + + ++ N + + ++ + +A+ G + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338
Query: 368 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 189
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397
Query: 188 YKVSLELLDRMKSERISPSILTYNTIIHACVRGGL 84
+K + L M E I P++ TY+ +I AC +GGL
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGL 432
Score = 62.4 bits (150), Expect = 2e-07
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
Frame = -2
Query: 602 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 432
K +E+ PS V + ++Y LIN LD K S+ +
Sbjct: 154 KCREVFDEMPSQGVTRSVFAYTA--LINAYGRNGAYNISLELLDKMKKDKVLPSILTYNT 211
Query: 431 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 255
V A+ G DW+ L LF M+ + +P+ Y ++ GL ++ VF M
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNE 270
Query: 254 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRGGLDWE 75
G+ + +++ L+ ++G+ G+ + ELL M+S P I++YN ++ A + G E
Sbjct: 271 GGILPDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKE 330
Query: 74 GLLGLFAQMRHDGIQPDLVTYNTL 3
+G+F QM+ G P+ TY+ L
Sbjct: 331 A-MGVFKQMQVAGCAPNATTYSIL 353
Score = 62.0 bits (149), Expect = 3e-07
Identities = 31/115 (26%), Positives = 62/115 (53%)
Frame = -2
Query: 347 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 168
P+ Y+ ++ G+ G L+K +E+ EM + G + S+ L+ AY ++G K ++ +
Sbjct: 275 PDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGV 334
Query: 167 LDRMKSERISPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 3
+M+ +P+ TY+ +++ R G ++ + LF +M+ +PD TYN L
Sbjct: 335 FKQMQVAGCAPNATTYSILLNLYGRNGR-YDDVRELFLEMKESNTEPDAATYNIL 388