BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00035782
         (2602 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   984   0.0  
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   900   0.0  
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   833   0.0  
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         813   0.0  
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     813   0.0  
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         813   0.0  
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         813   0.0  
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   813   0.0  
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc...   812   0.0  
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   812   0.0  
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   811   0.0  
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     811   0.0  
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   811   0.0  
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   810   0.0  
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...   810   0.0  
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]         808   0.0  
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        807   0.0  
gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subc...   806   0.0  
gb|AAS01934.1| putative Integrase core domain containing protein...   806   0.0  
gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group...   805   0.0  

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  984 bits (2545), Expect = 0.0
 Identities = 484/688 (70%), Positives = 563/688 (81%), Gaps = 1/688 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P N+WGEAILTANY+LNK+P KK E TPYELWKG KPSY +L++WGCLAKV VP PKKVK
Sbjct: 652  PQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVK 711

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIH-TTIIESRNAVFFEDIFPCKDKNKGAS 2245
            IGPKT D IFIGYA NS+AYRFLV+ S I  IH  TI+ESRNA FFED+FPCK K + +S
Sbjct: 712  IGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCKSKEEPSS 771

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINEPRRSKRMIKCTSFGSDFETFLLESEPQ 2065
                     +KR  +  D+N+  +        EPRRSKR+    SFG DF TF+LE EPQ
Sbjct: 772  ---------SKRMLESQDQNEEVEV-------EPRRSKRVRTEKSFGPDFLTFMLEGEPQ 815

Query: 2064 TFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSVD 1885
            TFKEA+++ E   WKEA  SE+ S+LQNHTWE VDLPPGCKPL  KWIFKRKMK DGS+D
Sbjct: 816  TFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSID 875

Query: 1884 KYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGEL 1705
            KYK RLV KGY++ EGL YFDTYSPVTRI SIR+++AIAAL NLEIHQMD+K        
Sbjct: 876  KYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDMK-------- 927

Query: 1704 DEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKCV 1525
              EIYMEQPEG   PGQEKKVCKLVKSLYGLKQAPKQWH+KFD+VM+ +GFKINECDKCV
Sbjct: 928  --EIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCV 985

Query: 1524 YFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKAS 1345
            Y K T  G VI+CLYVDDMLI+G++ ++I  TK +L S+FDMKD+G+ADVILGIKI + S
Sbjct: 986  YVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKRTS 1045

Query: 1344 GGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYLM 1165
              L+LSQSHY++ IL KF+KD+ GV++TP+D TLHL+KN+G+S+SQVEYSRIIGSL YLM
Sbjct: 1046 NELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLM 1105

Query: 1164 NCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDAN 985
            +CTRPDIA AV KLSR+TSNPG  HW+ IIRVLKYLR+TRDY LHYTRYP VLEGYSDAN
Sbjct: 1106 SCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYXLHYTRYPAVLEGYSDAN 1165

Query: 984  WISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFLE 805
            WIS+ KD KS SGYVFT+GG AVSWKSSKQT+I+RSTMESEFIALDK GEEAEWLR+FLE
Sbjct: 1166 WISNVKDSKSHSGYVFTLGGAAVSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHFLE 1225

Query: 804  DIPIWPKPVPAICIHCDSQSAIGRARSDIYNGKSRHIRLRQKTVKELLSMGIITIDYVKS 625
            DIP W KPVP ICIHCDSQSAIGRA+S++YNGKSRHIR R  T+++LLS G+I++DYVKS
Sbjct: 1226 DIPRWSKPVPPICIHCDSQSAIGRAQSNMYNGKSRHIRRRHNTIRQLLSTGVISVDYVKS 1285

Query: 624  KDNLADPFTKGLSREQVYRSSRGMGLKP 541
            KDN+ADP TKGL+RE V +SS GM LKP
Sbjct: 1286 KDNIADPLTKGLNRELVEKSSXGMXLKP 1313


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  900 bits (2327), Expect = 0.0
 Identities = 450/687 (65%), Positives = 525/687 (76%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P N+WGEAILTANY+LNK+P KK E TPYELWKG KPSY +L++WGCLAKV VP PKKVK
Sbjct: 652  PQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVK 711

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHTTIIESRNAVFFEDIFPCKDKNKGASV 2242
            IGPKT D IF                  I Y H                           
Sbjct: 712  IGPKTIDCIF------------------IGYAHN-------------------------- 727

Query: 2241 SDSNELLSNKRTFDQIDRNQSNQDRSNLQINEPRRSKRMIKCTSFGSDFETFLLESEPQT 2062
            S++   L  +     I +N   + R+                 SF  D    +   EPQT
Sbjct: 728  SNAYRFLVYESNIPDIHKNTIMESRN----------------ASFFED----VFPCEPQT 767

Query: 2061 FKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSVDK 1882
            FKEA+++ E   WKEA  SE+ S+LQNHTWE V+LP GCKPL  KWIFKRKMK DGS+DK
Sbjct: 768  FKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVBLPLGCKPLSSKWIFKRKMKVDGSIDK 827

Query: 1881 YKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGELD 1702
            YK RLV KGY++ EGL YFDTYSPVTRI SIR+++AIAAL NLEIHQMDVKTAFLNG+LD
Sbjct: 828  YKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFLNGDLD 887

Query: 1701 EEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKCVY 1522
            EEIYMEQPEG   PGQEKKVCKLVKSLYGLKQAPKQWH+KFD+VM+ +GFKINECDKCVY
Sbjct: 888  EEIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVY 947

Query: 1521 FKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKASG 1342
             K T  G VI+CLYVDDMLI+G++ ++I  TK +L S+FDMKD+G+ADVILGIKI + S 
Sbjct: 948  VKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKRTSB 1007

Query: 1341 GLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYLMN 1162
             L+LSQSHY++ IL KF+KD+ GV++TP+D TLHL+KN+G+S+SQVEYSRIIGSL YLM+
Sbjct: 1008 ELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMS 1067

Query: 1161 CTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDANW 982
            CTRPDIA AV+KLSR+TSNPG  HW+ IIRVLKYLR+TRDYGLHYTRYP VLEGYSDANW
Sbjct: 1068 CTRPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANW 1127

Query: 981  ISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFLED 802
            IS+ KD KS SGYVFT+GG AVSWKSSKQ +I+RSTMESEFIALDK GEEAEWLR+FLED
Sbjct: 1128 ISNVKDSKSHSGYVFTLGGAAVSWKSSKQXVIARSTMESEFIALDKCGEEAEWLRHFLED 1187

Query: 801  IPIWPKPVPAICIHCDSQSAIGRARSDIYNGKSRHIRLRQKTVKELLSMGIITIDYVKSK 622
            IP W KPVP ICIHCDSQSAIGRA+S++YNGKSRHI  R  T+++LLS G+I++DYVKSK
Sbjct: 1188 IPRWSKPVPPICIHCDSQSAIGRAQSNMYNGKSRHIXRRHNTIRQLLSTGVISVDYVKSK 1247

Query: 621  DNLADPFTKGLSREQVYRSSRGMGLKP 541
            DN+ADP TKGL+RE V +SSRGM LKP
Sbjct: 1248 DNIADPLTKGLNRELVEKSSRGMXLKP 1274


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  833 bits (2152), Expect = 0.0
 Identities = 418/612 (68%), Positives = 495/612 (80%), Gaps = 2/612 (0%)
 Frame = -2

Query: 2370 SAYRFLVHRSEISYIH-TTIIESRNAVFFEDIFPCKDKNKGASVSDSNELLSNKRTFDQI 2194
            +AYRFLV+ S I  IH  TI+ESRNA FFED+FPCK K + +S         +KR  + I
Sbjct: 507  NAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCKSKEEPSS---------SKRMLETI 557

Query: 2193 DRNQSNQDRSNLQINEPRRSKRMIKCTSFGSDFETFLLESEPQTFKEAMSTPEAPFWKEA 2014
              N+++QD++     EPRRSKR+    SFG DF TF+LE EPQTFKEA+++ E   WKEA
Sbjct: 558  --NENSQDQNEEVEVEPRRSKRVRTEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEA 615

Query: 2013 RDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSVDKYKVRLVAKGYKKKEGL 1834
              SE+ S+LQNHTWE VDLPPGCKPL  KWIFKRKMK DGS+DKYK RLV KGY++ EGL
Sbjct: 616  IKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGL 675

Query: 1833 YYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGELDEEIYMEQPEGLVVPGQ 1654
             YFDTYSPVTRI SIR+++AIAAL NLEIHQMDVKTAFLNG+LDEEIYMEQPEG   PGQ
Sbjct: 676  DYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFLNGDLDEEIYMEQPEGFSAPGQ 735

Query: 1653 EKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKCVYFKHTPKGCVILCLYVD 1474
            EKKVCKLVKSLYGLKQAPKQWH+KFD+VM+ +GFKINECDKCVY K T  G VI+CLYVD
Sbjct: 736  EKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVIVCLYVD 795

Query: 1473 DMLIMGNNMEVINDTKKLLKSK-FDMKDLGVADVILGIKIYKASGGLVLSQSHYIESILS 1297
            DMLI+G++ ++I  TK +L+ +    KD+G+ADVILGIKI + S  L+LSQSHY++ IL 
Sbjct: 796  DMLIVGSDDKMITSTKNMLQIQGLTSKDMGLADVILGIKIKRTSNELILSQSHYVDKILG 855

Query: 1296 KFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYLMNCTRPDIACAVNKLSR 1117
            KF+KD+ GV++TP+D TLHL+KN+G+S+SQVEYSRIIGSL YLM+CTRPDIA AV KLSR
Sbjct: 856  KFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVGKLSR 915

Query: 1116 FTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDANWISDSKDVKSTSGYVF 937
            +TSNPG  HW+ IIRVLKYLR+TRDYGLHYTRYP VLEGYSDANWIS+  +V+   G   
Sbjct: 916  YTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWISN--EVQQCRG--- 970

Query: 936  TIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFLEDIPIWPKPVPAICIHC 757
                        KQT+I+RSTMESEFIALDK GEEAEWLR+FLEDIP W KPVP ICIHC
Sbjct: 971  ---------NPQKQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHC 1021

Query: 756  DSQSAIGRARSDIYNGKSRHIRLRQKTVKELLSMGIITIDYVKSKDNLADPFTKGLSREQ 577
            DSQSAIGRA+S++YNGKSRHIR R  T+++LLS G+I++DYVKSKDN+ADP TKGL+RE 
Sbjct: 1022 DSQSAIGRAQSNMYNGKSRHIRRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNREL 1081

Query: 576  VYRSSRGMGLKP 541
            V +SSRGMGLKP
Sbjct: 1082 VEKSSRGMGLKP 1093


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  813 bits (2100), Expect = 0.0
 Identities = 392/690 (56%), Positives = 522/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+NY+LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 615  PKAWWGEALLTSNYVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 735  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 791

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 792  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 851

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 852  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 911

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 912  LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKC 971

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 972  VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1031

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1032 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYL 1091

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+ + RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1092 ASATRPDISFAVSKLSRFTSNPGDDHWRVLERVMRYLKGTVELGLHYTGYPAVLEGYSDS 1151

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1152 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1211

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1212 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1271

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1272 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  813 bits (2100), Expect = 0.0
 Identities = 392/690 (56%), Positives = 523/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 704  PKAWWGEALLTSNHVLNRIPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 763

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 764  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 823

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 824  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 880

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 881  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 940

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 941  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 1000

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 1001 LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKC 1060

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 1061 VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1120

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1121 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYL 1180

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1181 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDS 1240

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1241 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1300

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1301 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1360

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1361 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1390


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  813 bits (2100), Expect = 0.0
 Identities = 392/690 (56%), Positives = 523/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 735  --QPSEIIPSSITPSE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 791

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 792  KSISEAYASPDADYWKEAICSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 851

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 852  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 911

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +I  GF +NE DKC
Sbjct: 912  LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLISAGFAVNEADKC 971

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 972  VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1031

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1032 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYL 1091

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + G HYT YP VLEGYSD+
Sbjct: 1092 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGFHYTGYPAVLEGYSDS 1151

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1152 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1211

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1212 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1271

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1272 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  813 bits (2099), Expect = 0.0
 Identities = 392/690 (56%), Positives = 523/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 735  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 791

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 792  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 851

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 852  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 911

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 912  LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKC 971

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 972  VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1031

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1032 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYL 1091

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1092 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDS 1151

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1152 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1211

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1212 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1271

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1272 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  813 bits (2099), Expect = 0.0
 Identities = 390/696 (56%), Positives = 526/696 (75%), Gaps = 3/696 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 735  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 791

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 792  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 851

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 852  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 911

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G V+ GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 912  LDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTFAGFAVNEADKC 971

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 972  VYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1031

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1032 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYL 1091

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1092 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDS 1151

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1152 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1211

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  +   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1212 MDLPVVEKPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1271

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKPTGTESY 523
            ++  NLADPFTKGLSR  +  +S+ MGL+P   +++
Sbjct: 1272 QTARNLADPFTKGLSRNVIDNASKEMGLRPISNDAF 1307


>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2027

 Score =  812 bits (2098), Expect = 0.0
 Identities = 392/690 (56%), Positives = 523/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 810  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 869

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 870  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 929

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 930  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 986

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 987  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 1046

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 1047 EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 1106

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 1107 LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFGVNEADKC 1166

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 1167 VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1226

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1227 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYL 1286

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1287 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKDTVELGLHYTGYPAVLEGYSDS 1346

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1347 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1406

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1407 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1466

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1467 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1496


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  812 bits (2098), Expect = 0.0
 Identities = 391/690 (56%), Positives = 523/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 735  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 791

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 792  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 851

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 852  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 911

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G V+ GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 912  LDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKC 971

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 972  VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1031

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1032 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYL 1091

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1092 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDS 1151

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1152 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1211

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1212 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1271

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1272 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  811 bits (2096), Expect = 0.0
 Identities = 392/690 (56%), Positives = 522/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 408  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 467

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 468  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 527

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                 E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 528  --QPFEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 584

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 585  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 644

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 645  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 704

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 705  LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKC 764

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 765  VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 824

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 825  ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYL 884

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 885  ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDS 944

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 945  NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1004

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1005 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1064

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1065 QTARNLADPFTKGLSRNVINNASKEMGLRP 1094


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  811 bits (2096), Expect = 0.0
 Identities = 392/690 (56%), Positives = 523/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKHK 674

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 735  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 791

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 792  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 851

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 852  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 911

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 912  LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKC 971

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 972  VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1031

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1032 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYL 1091

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYTRYP VLEGYSD+
Sbjct: 1092 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVLEGYSDS 1151

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1152 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1211

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  K VPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1212 MDLPVVEKLVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1271

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1272 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  811 bits (2094), Expect = 0.0
 Identities = 390/690 (56%), Positives = 523/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 735  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 791

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 792  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 851

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 852  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 911

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G V+ GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 912  LDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKC 971

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 972  VYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1031

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1032 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYL 1091

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1092 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDS 1151

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1152 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1211

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  +   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1212 MDLPVVEKPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1271

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1272 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  810 bits (2093), Expect = 0.0
 Identities = 391/690 (56%), Positives = 522/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KP   +L+ WGCLAKV VP+ KK K
Sbjct: 831  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRK 890

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 891  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 950

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 951  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 1007

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 1008 KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 1067

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 1068 EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 1127

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 1128 LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKC 1187

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 1188 VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1247

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1248 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYL 1307

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1308 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDS 1367

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1368 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1427

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1428 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1487

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1488 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1517


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  810 bits (2093), Expect = 0.0
 Identities = 391/690 (56%), Positives = 522/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KP   +L+ WGCLAKV VP+ KK K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRK 674

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 735  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 791

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 792  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 851

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 852  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 911

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 912  LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKC 971

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 972  VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1031

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 1032 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYL 1091

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1092 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDS 1151

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1152 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1211

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1212 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1271

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1272 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score =  808 bits (2088), Expect = 0.0
 Identities = 389/690 (56%), Positives = 521/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 735  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 791

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N  WE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 792  KSISEAYASPDADYWKEAVRSEMDSIIANGIWEVTERPYGCKPVGCKWVFKKKLRPDGTI 851

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSP+ R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 852  EKYKARLVAKGYTQKEGEDFFDTYSPIARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 911

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKC
Sbjct: 912  LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKC 971

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 972  VYYRHGGGKGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 1031

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN   + +Q+EYS+IIGSL YL
Sbjct: 1032 ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNNRIARNQLEYSQIIGSLMYL 1091

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ R+++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1092 ASATRPDISFAVSKLSRFTSNPGDDHWRALERIMRYLKGTVELGLHYTGYPAVLEGYSDS 1151

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1152 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1211

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1212 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1271

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1272 QTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  807 bits (2085), Expect = 0.0
 Identities = 390/689 (56%), Positives = 516/689 (74%), Gaps = 2/689 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGE +LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 587  PKAWWGEVLLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 646

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHTTII-ESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  II ESR+A FFE  FP KD + G++
Sbjct: 647  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHVGIIMESRDATFFESFFPMKDTHSGSN 706

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINEPRRSKRMIKCTSFGSDFETFLLESEPQ 2065
               S  + S+    +Q +         ++    PRRSKR     SFG DF  +L++  P+
Sbjct: 707  -QPSEIIPSSIIPPEQTEHTHELVSEEDVS-EAPRRSKRQRTAKSFGDDFTVYLVDDTPK 764

Query: 2064 TFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSVD 1885
            +  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG+++
Sbjct: 765  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTEQPYGCKPVGCKWVFKKKLRPDGTIE 824

Query: 1884 KYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGEL 1705
            KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGEL
Sbjct: 825  KYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGEL 884

Query: 1704 DEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKCV 1525
            DEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD  +   GF +NE DKCV
Sbjct: 885  DEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFGVNEADKCV 944

Query: 1524 YFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKAS 1345
            Y++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ +  
Sbjct: 945  YYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGE 1004

Query: 1344 GGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYLM 1165
             G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL 
Sbjct: 1005 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLA 1064

Query: 1164 NCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDAN 985
            + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+N
Sbjct: 1065 SATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSN 1124

Query: 984  WISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFLE 805
            WISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L 
Sbjct: 1125 WISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLM 1184

Query: 804  DIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYVK 628
            D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY++
Sbjct: 1185 DLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQ 1244

Query: 627  SKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            +  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1245 TARNLADPFTKGLSRNVIDNASKEMGLRP 1273


>gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1197

 Score =  806 bits (2082), Expect = 0.0
 Identities = 390/690 (56%), Positives = 519/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 510  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 569

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 570  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 629

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PR+SKR     SFG DF  +L++  P
Sbjct: 630  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRKSKRQRTAKSFGDDFTVYLVDDTP 686

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 687  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 746

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 747  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 806

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD      GF +NE DKC
Sbjct: 807  LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTFTSAGFAVNEADKC 866

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 867  VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 926

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 927  ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIAGNQLEYSQIIGSLMYL 986

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+  V+KLSRFTSNPG DHW+A+ RV+ YL+ T + GLHYT YP VLEGYSD+
Sbjct: 987  ASATRPDISFVVSKLSRFTSNPGDDHWRALERVMCYLKGTVELGLHYTGYPAVLEGYSDS 1046

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME E  ALD A  EAEWLR+ L
Sbjct: 1047 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEVELTALDTATVEAEWLRDLL 1106

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1107 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1166

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1167 QTARNLADPFTKGLSRNVINNASKEMGLRP 1196


>gb|AAS01934.1| putative Integrase core domain containing protein [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  806 bits (2082), Expect = 0.0
 Identities = 390/690 (56%), Positives = 519/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPYE+W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 493  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 552

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +S AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 553  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 612

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PR+SKR     SFG DF  +L++  P
Sbjct: 613  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRKSKRQRTAKSFGDDFTVYLVDDTP 669

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GCKP+GCKW+FK+K++PDG++
Sbjct: 670  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTI 729

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 730  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 789

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD      GF +NE DKC
Sbjct: 790  LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTFTSAGFAVNEADKC 849

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 850  VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 909

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 910  ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIAGNQLEYSQIIGSLMYL 969

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+  V+KLSRFTSNPG DHW+A+ RV+ YL+ T + GLHYT YP VLEGYSD+
Sbjct: 970  ASATRPDISFVVSKLSRFTSNPGDDHWRALERVMCYLKGTVELGLHYTGYPAVLEGYSDS 1029

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD  ++K+TSGYVFT+GGGAVSW+S KQT+++RSTME E  ALD A  EAEWLR+ L
Sbjct: 1030 NWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEVELTALDTATVEAEWLRDLL 1089

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q+ I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1090 MDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1149

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +  +S+ MGL+P
Sbjct: 1150 QTARNLADPFTKGLSRNVINNASKEMGLRP 1179


>gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711758|gb|ABF99553.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1224

 Score =  805 bits (2079), Expect = 0.0
 Identities = 389/690 (56%), Positives = 520/690 (75%), Gaps = 3/690 (0%)
 Frame = -2

Query: 2601 PDNLWGEAILTANYILNKLPHKKKESTPYELWKGHKPSYKFLKVWGCLAKVEVPLPKKVK 2422
            P   WGEA+LT+N++LN++P++ K+ TPY++W G KPS  +L+ WGCLAKV VP+ KK K
Sbjct: 537  PKAWWGEALLTSNHVLNRVPNRNKDKTPYKIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 596

Query: 2421 IGPKTFDGIFIGYAENSSAYRFLVHRSEISYIHT-TIIESRNAVFFEDIFPCKDKNKGAS 2245
            +GPKT D +F+GYA +  AYRFL+ +SE+  +H  TI+ESR+A FFE  FP KD + G++
Sbjct: 597  LGPKTVDCVFLGYAHHIIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 656

Query: 2244 VSDSNELLSNKRTFDQIDRNQSNQDRSNLQINE-PRRSKRMIKCTSFGSDFETFLLESEP 2068
                +E++ +  T  +     +++  S   ++E PRRSKR     SFG DF  +L++  P
Sbjct: 657  --QPSEIIPSSITPPE-QTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTP 713

Query: 2067 QTFKEAMSTPEAPFWKEARDSEVQSLLQNHTWEWVDLPPGCKPLGCKWIFKRKMKPDGSV 1888
            ++  EA ++P+A +WKEA  SE+ S++ N TWE  + P GC+P+GCKW+FK+K++PDG++
Sbjct: 714  KSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCQPVGCKWVFKKKLRPDGTI 773

Query: 1887 DKYKVRLVAKGYKKKEGLYYFDTYSPVTRITSIRVLIAIAALYNLEIHQMDVKTAFLNGE 1708
            +KYK RLVAKGY +KEG  +FDTYSPV R+T+IRVL+++AA + L +HQMDVKTAFLNGE
Sbjct: 774  EKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGE 833

Query: 1707 LDEEIYMEQPEGLVVPGQEKKVCKLVKSLYGLKQAPKQWHQKFDSVMI*NGFKINECDKC 1528
            LDEEIYM+QP+G VV GQE KVCKL+KSLYGLKQAPKQWH+KFD ++   GF +NE DKC
Sbjct: 834  LDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKILTSAGFAVNEADKC 893

Query: 1527 VYFKHTPKGCVILCLYVDDMLIMGNNMEVINDTKKLLKSKFDMKDLGVADVILGIKIYKA 1348
            VY++H     VILCLYVDD+LI G N+EVIN+ K  L   FDMKDLGVADVIL IK+ + 
Sbjct: 894  VYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRG 953

Query: 1347 SGGLVLSQSHYIESILSKFEKDDGGVSKTPIDPTLHLAKNRGQSISQVEYSRIIGSLTYL 1168
              G+ L QSHY+E IL++F   D   S TP DP+L L KN+  + +Q+EYS+IIGSL YL
Sbjct: 954  ENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLHKNKRIARNQLEYSQIIGSLMYL 1013

Query: 1167 MNCTRPDIACAVNKLSRFTSNPGKDHWKAIIRVLKYLRYTRDYGLHYTRYPPVLEGYSDA 988
             + TRPDI+ AV+KLSRFTSNPG DHW+A+ RV++YL+ T + GLHYT YP VLEGYSD+
Sbjct: 1014 ASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDS 1073

Query: 987  NWISDSKDVKSTSGYVFTIGGGAVSWKSSKQTLISRSTMESEFIALDKAGEEAEWLRNFL 808
            NWISD   +K+TSGYVFT+GGGAVSW+S KQT+++RSTME+E  ALD A  EAEWLR+ L
Sbjct: 1074 NWISDVDKIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLL 1133

Query: 807  EDIPIWPKPVPAICIHCDSQSAIGRARSDIYNGK-SRHIRLRQKTVKELLSMGIITIDYV 631
             D+P+  KPVPAI ++CD+Q  I +  S   N K SRH++ R K+V++L + G+IT+DY+
Sbjct: 1134 MDLPVVEKPVPAILMNCDNQMVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYI 1193

Query: 630  KSKDNLADPFTKGLSREQVYRSSRGMGLKP 541
            ++  NLADPFTKGLSR  +   S+ MGL+P
Sbjct: 1194 QTARNLADPFTKGLSRNVIDNVSKEMGLRP 1223