BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00035058
         (2423 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008349809.1| PREDICTED: uncharacterized protein LOC103413...   237   6e-61
ref|XP_008385055.1| PREDICTED: uncharacterized protein LOC103447...   235   2e-60
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   226   1e-56
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]           211   4e-56
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...   209   5e-54
ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420...   214   6e-54
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...   205   6e-54
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...   215   1e-53
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   215   2e-53
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   213   5e-52
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...   199   4e-51
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...   199   1e-50
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]         207   4e-50
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]    201   1e-49
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]   204   3e-49
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   192   2e-48
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   192   2e-48
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...   199   1e-47
gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Ar...   196   8e-47
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   192   1e-45

>ref|XP_008349809.1| PREDICTED: uncharacterized protein LOC103413096 [Malus domestica]
          Length = 954

 Score =  237 bits (604), Expect(2) = 6e-61
 Identities = 170/591 (28%), Positives = 259/591 (43%), Gaps = 12/591 (2%)
 Frame = -2

Query: 1798 QYQFVRFVDGSIEPQPQFLNHNNVPVVYPIYLEWRTLDQFVGSCINATISPSLATELLGK 1619
            +Y+ +  +DG+      FL   ++   +    +W   DQ +   +N+T+S  +    +G 
Sbjct: 72   RYKLLGVIDGTDVCPSPFLPDRSINXAFE---DWYEKDQNLLIWLNSTLSEEIIPFTVGV 128

Query: 1618 SIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIGEPV 1439
            S +R+ W+ L + F     A   QLR ++ S+Q+G  SI DYL +LK ISDSL   G  V
Sbjct: 129  SSSRELWVKLEQRFGGISEAHIHQLRSRJQSVQKGSRSISDYLQELKEISDSLQAAGASV 188

Query: 1438 QDDDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINHEQWLKDQENAIYSPLIA 1259
             D DL+   L GL  E+  F+  +  R    S  +L   L+  E  +  ++    SP+  
Sbjct: 189  SDRDLIAAILHGLPDEFESFIDCIMLRLSSTSLDELHGLLLTKELSMARRKTVSSSPV-- 246

Query: 1258 DPSNSAFFVRKQQ------NTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGF 1097
              S  AF V+ Q       + F                                     F
Sbjct: 247  PESFQAFSVQSQXPXLPTPSAFAAQNXPLXSASRFNSNRGRNTKGQFFSNRGHRGNRGNF 306

Query: 1096 QFKKGE-----FNPNLTVDYGEIPSQICNKKGHFANTFYYRYVPSMNNSPPMQKAFASFE 932
               +G      F  N    + ++  QIC    H A   + R  P +    P  K  A   
Sbjct: 307  PNNRGNRGYQGFRSNQXSSHFKVLCQICGSTSHEAIDCFDRMNPDICGRIPPAKLAAMCA 366

Query: 931  NALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMTDA 752
                 HS  P++                           W+ DSGATSH+TN+ A +T  
Sbjct: 367  Q----HSAKPSQP--------------------------WLIDSGATSHITNDVANLTSP 396

Query: 751  VEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFTLE 572
              + G+++  +GDGK                   SF L NVL+VPHI HNL S   F  +
Sbjct: 397  TPYTGEDKVYIGDGKGLSILNVGSSTLHT--SHNSFQLRNVLHVPHITHNLLSAYQFVND 454

Query: 571  NSCSYEFFPWGYEIKSLPSRKVLARGPNASELYPIKSSALRRNTALSASIMSNSNTXXXX 392
            N+CS    P+G  +K   S K+L RGP     YP++SS+     + +A +   +      
Sbjct: 455  NNCSLTLDPYGSYVKDRISGKMLLRGPVRDGFYPLQSSSNLHPLSPTALLSIKAPVTI-- 512

Query: 391  XXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNK-VFESVCTSCQLGKSHSLPFLVSPS 215
                    W++RLGHP S++   L ++  + L  K   +  C+ C L K+H LPF  + S
Sbjct: 513  --------WHKRLGHPSSSIFRRLLSSNNLALQGKSTVDFFCSDCALAKNHKLPFKAATS 564

Query: 214  RACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESL 62
                 L L+HCD+WGPA   S  GF+Y+++ VDD+SKY+W FP+K +S+ +
Sbjct: 565  STTHSLQLLHCDLWGPASITSSSGFQYYLLIVDDYSKYSWFFPLKSKSDGI 615



 Score = 28.1 bits (61), Expect(2) = 6e-61
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -3

Query: 1920 NHNYVYRFTPLPFPNVSNFVSTKLDGSNFLVWKDQLSSILISTNLYGLL 1774
            N + +  +T L   N+ + V  KL  SN+L W+     I     L G++
Sbjct: 31   NPSXLTSYTSLTIHNIGSMVPIKLKRSNYLPWRALFGPIFRRYKLLGVI 79


>ref|XP_008385055.1| PREDICTED: uncharacterized protein LOC103447646 [Malus domestica]
          Length = 727

 Score =  235 bits (600), Expect(2) = 2e-60
 Identities = 174/617 (28%), Positives = 277/617 (44%), Gaps = 19/617 (3%)
 Frame = -2

Query: 1798 QYQFVRFVDGS-IEPQPQFLNH--NNVPVVYPIYLEWRTLDQFVGSCINATISPSLATEL 1628
            +Y+    +DGS + P P  L+   N      P +  W   DQ +   +N+T+S  L    
Sbjct: 68   RYKLTGILDGSEVCPSPFLLDASGNTTSTPNPAFDLWYEKDQNILIWLNSTLSEDLIPFT 127

Query: 1627 LGKSIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIG 1448
            +G + +R+ WL+L + F     A   QLR +LH++Q+    I +Y+  +KTI D+L   G
Sbjct: 128  VGVTSSRELWLNLKQRFGGVSAAHIHQLRSRLHTVQKRDLIISNYIQLIKTIYDALMATG 187

Query: 1447 EPVQDDDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINHEQWLKDQENAIYSP 1268
             P+ + DL++ TL+GL  +Y  FV ++  R    S  +L   LIN E ++ +++  I + 
Sbjct: 188  APLSESDLIVVTLNGLSEDYESFVDSIMLRISSTSLDELHGLLINKELFM-NRKKKIVAS 246

Query: 1267 LIADP--SNSAFFVRKQ------------QNTFXXXXXXXXXXXXXXXXXXXXXXXXXXX 1130
             +++P  + +A +   Q            QN +                           
Sbjct: 247  SVSEPFQAYAAQYQHSQAPLLPTPQGHPGQNLYISAPRQFNRGKGTYMGNNYRGNNNYRG 306

Query: 1129 XXXXXXXXPGFQFKKGEFNPNL-TVDYGEIPSQICNKKGHFANTFYYRYVPSMNNSPPMQ 953
                      F    G +  +  T      P QIC+   H A   + R   +     P  
Sbjct: 307  NNYRGNSRGNFNRNSGSYTRHSGTTTSHRDPCQICHSPDHEALDCFERMNHAFAGKIPPA 366

Query: 952  KAFASFENALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNN 773
            K  A   + ++  S+SP                             W+ DSGATSH+TN+
Sbjct: 367  KLAAMCAHTIK--SFSPT----------------------------WLMDSGATSHITND 396

Query: 772  TAIMTDAVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFS 593
             + +     + G ++  +G+G+                   +F L+NVL+VP +KHNLFS
Sbjct: 397  ISAIHSPTNYNGQDKVYIGNGQGMLIHHTGTTFLTTP--TATFRLNNVLHVPAMKHNLFS 454

Query: 592  IANFTLENSCSYEFFPWGYEIKSLPSRKVLARGPNASELYPIKSSALRRNTALSASIMSN 413
               F  +N         G +IK   S  +L R P     YP +      +T+ SA + S 
Sbjct: 455  AYQFLRDNHYKLTLDSDGSKIKDCISGMMLFRRPIKDGFYPFQ-GITPASTSPSALVCSK 513

Query: 412  SNTXXXXXXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNKVFES-VCTSCQLGKSHSL 236
            +             +W+ RLGHP S +      +  I  S+K F S  C+ C +GK+H L
Sbjct: 514  A----------PLQIWHNRLGHPSSAIFRKTLNSSTIVYSDKKFTSFFCSDCAIGKNHKL 563

Query: 235  PFLVSPSRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNC 56
            PF  S S    PL LVHCD+WGP P++S  G+KY+++FVD+F+KY+W+FP+K +SE  + 
Sbjct: 564  PFTTSISFVSVPLELVHCDVWGPTPTLSLSGYKYYVLFVDEFTKYSWMFPLKLKSEVYSV 623

Query: 55   FMLFKSLMENLLEFKKK 5
            F+ FK  +ENL+  K K
Sbjct: 624  FVNFKCYVENLVGNKIK 640



 Score = 27.7 bits (60), Expect(2) = 2e-60
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 1878 NVSNFVSTKLDGSNFLVWKDQLSSILISTNLYGLL 1774
            ++S  V TKL   N+LVWK   + I     L G+L
Sbjct: 41   HISCMVPTKLKRDNYLVWKALFAPIFRRYKLTGIL 75


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  226 bits (575), Expect(2) = 1e-56
 Identities = 169/600 (28%), Positives = 270/600 (45%), Gaps = 5/600 (0%)
 Frame = -2

Query: 1789 FVRFVDG-SIEPQPQFLNHNNVPVVYPIYLEWRTLDQFVGSCINATISPSLATELLGKSI 1613
            F  F+DG S+ P+ +         + P ++  R  D+ + S I ++++P +  +++G + 
Sbjct: 58   FEDFIDGTSVCPEKELRPGE----INPAFVAXRRQDRTILSWIYSSLTPGIMAQIIGHNS 113

Query: 1612 ARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIGEPVQD 1433
            +   W  L KIF+    AR  QL  +  S ++G  S+ DY+ ++K  +DSLA IGEPV +
Sbjct: 114  SHSAWNALEKIFSSCSRARIMQLXLEFQSTKKGSMSMIDYIMKVKGAADSLAAIGEPVSE 173

Query: 1432 DDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINHEQWLKDQENAIYSPLI--- 1262
             D +M  L GLGS+Y   V  +  RE  +S   + S L+  EQ L+ Q +    P +   
Sbjct: 174  QDQIMNLLGGLGSDYNAVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIEQLPAMSAN 233

Query: 1261 -ADPSNSAFFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGFQFKK 1085
             A  SN+    RK                                         G   + 
Sbjct: 234  YASXSNNRGGGRKYNG----------------------GRGPNFMMTNSNFRGRGRGXRY 271

Query: 1084 GEFNPNLTVDYGEIPSQICNKKGHFANTFYYRYVPSMNNSPPMQKAFASFENALRFHSWS 905
            G+     +        Q+C K GH     Y+R+  +  ++       ++  N+    +  
Sbjct: 272  GQSGRQNSSSSERPQCQLCGKFGHTVQVCYHRFDITFQSTQNNTTGVSNSGNS----NXM 327

Query: 904  PAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMTDAVEFIGDEQA 725
            PA                    S N     W  DSGA+ H+T N A +T+A  + G ++ 
Sbjct: 328  PA----------------MVAXSNNXADDNWYLDSGASHHLTQNVANLTNATPYTGADKV 371

Query: 724  MVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFTLENSCSYEFFP 545
             +G+GK                   SF L  V +VP I  NL S+A F  +N+   EF  
Sbjct: 372  TIGNGKHLTISNTXFTRLFS--NPHSFQLKKVFHVPFISANLISVAKFCSDNNALIEFHS 429

Query: 544  WGYEIKSLPSRKVLARGPNASELYPIKSSALRRNTALSASIMSNSNTXXXXXXXXXXXLW 365
             G+ +K L +++VLA+G   + LY     + ++   +    ++N +T           LW
Sbjct: 430  NGFFLKDLHTKRVLAQGKLENGLYKFPVISNKKTAYVG---ITNDSTFQCSNIENKRELW 486

Query: 364  NQRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPSRACQPLSLVH 185
            + RLGH  + ++  +     +    K   +VC+SCQL KSH LP  +S   A +PL LV+
Sbjct: 487  HHRLGHAATDIVTRIMHNCNVSCG-KYKATVCSSCQLAKSHRLPTHLSSFHASKPLELVY 545

Query: 184  CDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLFKSLMENLLEFKKK 5
             DIWGPA   S  G KYFI+FVDD+S+Y W++ ++ + ++L  F  FK  +EN  E K K
Sbjct: 546  TDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEAKIK 605



 Score = 25.0 bits (53), Expect(2) = 1e-56
 Identities = 6/20 (30%), Positives = 16/20 (80%)
 Frame = -3

Query: 1854 KLDGSNFLVWKDQLSSILIS 1795
            KLD +N+++W+ Q+ +++ +
Sbjct: 36   KLDRTNYILWRSQIDNVIFA 55


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score =  211 bits (537), Expect(2) = 4e-56
 Identities = 161/608 (26%), Positives = 267/608 (43%), Gaps = 11/608 (1%)
 Frame = -2

Query: 1795 YQFVRFVDGSIEPQPQFLN----HNNVPVVYPIYLEWRTLDQFVGSCINATISPSLATEL 1628
            ++ + FV+G I P P+ LN      +V V  P Y  W   DQ + S +  T+S  +   +
Sbjct: 40   HKLIGFVNGGITPPPRTLNVVTGDTSVDVANPQYESWFCTDQLIRSWLFGTLSEEVLGYV 99

Query: 1627 LGKSIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIG 1448
                 +RD W+ L++ F +   AR+  LR  L  + +   ++  Y  +   + D+L+ IG
Sbjct: 100  HNLQTSRDIWISLAENFNKSSVAREFTLRRTLQLLSKKDKTLSAYCREFIAVCDALSSIG 159

Query: 1447 EPVQDDDLVMYTLSGLGSEYAHFVITMQN---REVPLSFAKLRSRLINHEQWLKDQENAI 1277
            +PV +   +   L+GLG EY      +Q+   +  P +F  + S +   +  L+  E ++
Sbjct: 160  KPVDESMKIFGFLNGLGREYDPITTVIQSSLSKISPPTFRDVISEVKGFDVKLQSYEESV 219

Query: 1276 YSPLIADPSNSAFFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGF 1097
                 A+P + AF  ++ + T                                     G 
Sbjct: 220  ----TANP-HMAFNTQRSEYT----------DNYTSGNRGKGRGGYGQNRGRSGYSTRGR 264

Query: 1096 QFKKGEFNPNLTVDYGEIP-SQICNKKGHFANTFYYRYVPSMNNSPPMQKAFASFENALR 920
             F + + N N T   GE P  QIC + GH A   Y R+             + S + A  
Sbjct: 265  GFSQHQTNSNNT---GERPVCQICGRTGHTALKCYNRF----------DHNYQSVDTAQA 311

Query: 919  FHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMTDAVEFI 740
            F S   ++S                       G  W+PDS AT+H+T++T  +  A  + 
Sbjct: 312  FSSLRVSDS----------------------SGKEWVPDSAATAHVTSSTNNLQAASPYN 349

Query: 739  GDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFTLENSCS 560
            G +  +VGDG                +G  +  L+ VL  P I+ +L S++    +  C 
Sbjct: 350  GSDTVLVGDGAYLPITHVGSTTISSDSG--TLPLNEVLVCPDIQKSLLSVSKLCDDYPCG 407

Query: 559  YEFFPWGYEIKSLPSRKVLARGPNASELYPIKSS---ALRRNTALSASIMSNSNTXXXXX 389
              F      I  + ++KV+++GP ++ LY +++    A   N   +AS            
Sbjct: 408  VYFDANKVCIIDINTQKVVSKGPRSNGLYVLENQEFVAFYSNRQCAAS------------ 455

Query: 388  XXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPSRA 209
                  +W+ RLGH  S ++  L ++  I  +      VC  CQ+GKS  L F  S SR 
Sbjct: 456  ----EEIWHHRLGHSNSRILQQLKSSKEISFNKSRMSPVCEPCQMGKSSKLQFFSSNSRE 511

Query: 208  CQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLFKSLME 29
               L  +HCD+WGP+P +S  GFKY++VFVDD+S+Y+W +P+K +S+    F+ F++L+E
Sbjct: 512  LDLLGRIHCDLWGPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVE 571

Query: 28   NLLEFKKK 5
            N    K K
Sbjct: 572  NQFNTKIK 579



 Score = 37.7 bits (86), Expect(2) = 4e-56
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
 Frame = -3

Query: 1893 PLPFPN---VSNFVSTKLDGSNFLVWKDQLSSILISTNLYGLL 1774
            P PFP+   VS+ V+ KL+ SN+L+WK Q  S+L    L G +
Sbjct: 4    PYPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSCHKLIGFV 46


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score =  209 bits (532), Expect(2) = 5e-54
 Identities = 159/606 (26%), Positives = 267/606 (44%), Gaps = 14/606 (2%)
 Frame = -2

Query: 1780 FVDGSIEP--QPQFLNHNNVPVVYPI--YLEWRTLDQFVGSCINATISPSLATELLGKSI 1613
            FV GSI    Q + + HNNV    P   +  W   DQ V S +  + +  + + ++    
Sbjct: 43   FVTGSISAPAQTRSVTHNNVTSEEPNPEFYTWHQTDQVVKSWLLGSFAEDILSVVVNCFT 102

Query: 1612 ARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIGEPVQD 1433
            +   WL L+  F +   +R  +L+ +L ++++   ++  +L  LK I D LA +G PV +
Sbjct: 103  SHQVWLTLANHFNRVSSSRLFELQRRLQTLEKKDNTMEVFLKDLKHICDQLASVGSPVPE 162

Query: 1432 DDLVMYTLSGLGSEYAHFVITMQNR---EVPLSFAKLRSRLINHEQWLKDQENAIYSPLI 1262
               +   L+GLG EY     T++N       LS  ++ S+L  ++  L   ++ +  P I
Sbjct: 163  KMKIFSALNGLGREYEPIKTTIENSVDSNPSLSLDEVASKLRGYDDRL---QSYVTEPTI 219

Query: 1261 ADPSNSAFFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGFQFKKG 1082
            +   + AF V    + +                                     F  +  
Sbjct: 220  SP--HVAFNVTHSDSGYYHNNNRGKGRSNSGSGKS------------------SFSTRGR 259

Query: 1081 EFNPNLTVDYGE------IPSQICNKKGHFANTFYYRYVPSMNNSP-PMQKAFASFENAL 923
             F+  ++   G       +  QIC K GH A   ++R+  S  +   PM  A     +  
Sbjct: 260  GFHQQISPTSGSQAGNSGLVCQICGKAGHHALKCWHRFDNSYQHEDLPMALATMRITDVT 319

Query: 922  RFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMTDAVEF 743
              H                              G  WIPDS A++H+TNN  ++  +  +
Sbjct: 320  DHH------------------------------GHEWIPDSAASAHVTNNRHVLQQSQPY 349

Query: 742  IGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFTLENSC 563
             G +  MV DG                +G     L  VL  P I  +L S++  T +  C
Sbjct: 350  HGSDSIMVADGNFLPITHTGSGSIASSSG--KIPLKEVLVCPDIVKSLLSVSKLTSDYPC 407

Query: 562  SYEFFPWGYEIKSLPSRKVLARGPNASELYPIKSSALRRNTALSASIMSNSNTXXXXXXX 383
            S EF      I    ++K+L  G N   LY ++   L+    +  S   NS +       
Sbjct: 408  SVEFDADSVRINDKATKKLLVMGRNRDGLYSLEEPKLQ----VLYSTRQNSASSEV---- 459

Query: 382  XXXXLWNQRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPSRACQ 203
                 W++RLGH  + V++ L ++ +I + NKV ++VC +C LGKS  LPF++S   A +
Sbjct: 460  -----WHRRLGHANAEVLHQLASSKSIIIINKVVKTVCEACHLGKSTRLPFMLSTFNASR 514

Query: 202  PLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLFKSLMENL 23
            PL  +HCD+WGP+P+ S  GF+Y++VF+D +S++ W +P+K +S+  + F++F+ L+EN 
Sbjct: 515  PLERIHCDLWGPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQ 574

Query: 22   LEFKKK 5
            L  K K
Sbjct: 575  LGHKIK 580



 Score = 32.7 bits (73), Expect(2) = 5e-54
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 1890 LPFPNVSNFVSTKLDGSNFLVWKDQLSSILISTNLYGLL 1774
            +P  N+SN V+  L+  N+++WK Q  S L    L G +
Sbjct: 6    VPPLNISNCVTVTLNQQNYILWKSQFESFLSGQGLLGFV 44


>ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420252 [Malus domestica]
          Length = 1312

 Score =  214 bits (544), Expect(2) = 6e-54
 Identities = 172/623 (27%), Positives = 264/623 (42%), Gaps = 25/623 (4%)
 Frame = -2

Query: 1798 QYQFVRFVDGSIEPQPQ-FLNHNNVPVVYPIYLEWRTLDQFVGSCINATISPSLATELLG 1622
            +Y+ +  VDG+ EP P  FL   ++    P + +W   DQ +    N+T+S  +    +G
Sbjct: 66   RYKLLGIVDGT-EPCPSPFLPDRSIN---PHFEQWYEKDQNLLIWFNSTLSEEIIPFTVG 121

Query: 1621 KSIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIGEP 1442
             S ARD WL L + F     A   QLR +L +IQ+G  S+ DYL Q+K ISDSL   G  
Sbjct: 122  VSSARDLWLKLEQRFGGVSDAHIHQLRSKLQNIQKGSQSMADYLQQIKEISDSLTAAGAS 181

Query: 1441 VQDDDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINHEQWLKDQENAIYS--- 1271
            V D DL+  TL+GL  ++  F  ++  R    S  +L   L+  E  ++ ++ +  S   
Sbjct: 182  VTDRDLIAATLAGLTDDFESFTDSILLRLSSTSLDELHGLLLTKELSMERRKKSSSSEPF 241

Query: 1270 ---------PLIADPSNSAFFVRKQ-----QNTFXXXXXXXXXXXXXXXXXXXXXXXXXX 1133
                     PL+  P   A           QN+F                          
Sbjct: 242  HAFSVQSQAPLLPTPPPHALVAPNPGASPLQNSFRYNSTRSYTRGSNRGFSRGSNRNYNR 301

Query: 1132 XXXXXXXXXPGFQFKKGEFNPNL----TVDYGEIPSQICNKKGHFANTFYYRYVPSMNN- 968
                         F +G +N       +    +   QIC    H A   + R  P ++  
Sbjct: 302  GSNRGNFNSG---FNRGSYNSGFNRPASSSGHKTSCQICGSTSHEALDCFDRMNPEISGK 358

Query: 967  -SPPMQKAFASFENALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGAT 791
             SP    A  +   A   +SW                                + DSGAT
Sbjct: 359  FSPAKLAAMCAHYTAKSSNSW--------------------------------LIDSGAT 386

Query: 790  SHMTNNTAIMTDAVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHI 611
            SH+TN+ + +     + G+++  +GDGK                   SF LHNVL+VP +
Sbjct: 387  SHITNDISNIQSPTPYHGEDKVYIGDGKGLSIDHIGTSILHTPA--HSFKLHNVLHVPQM 444

Query: 610  KHNLFSIANFTLENSCSYEFFPWGYEIKSLPSRKVLARGPNASELYPIKSSALRRNTALS 431
            +H+L S   F  +N CS      G  +K   + + L RG      +P+  S        +
Sbjct: 445  QHSLLSAYQFIKDNBCSLTLDINGSSVKDRFTGRTLLRGQVKDGFFPLHGSP-------A 497

Query: 430  ASIMSNSNTXXXXXXXXXXXLWNQRLGHPISTVINNLHTTGAIQL-SNKVFESVCTSCQL 254
             S +S+S T           +W+ RLGHP S +   + +T  + +         C  C L
Sbjct: 498  LSTVSHSPT-ALVSTAANVRIWHSRLGHPSSAIFRKVLSTNKVVVHGTSSLAFFCKDCAL 556

Query: 253  GKSHSLPFLVSPSRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCR 74
             K+H LPF    S +   L L+HCD+WGP+P +S  G++Y+++ VDD+SKY+W FP+K +
Sbjct: 557  AKNHKLPFGSPQSVSTASLELLHCDVWGPSPVVSVSGYRYYLLIVDDYSKYSWYFPLKSK 616

Query: 73   SESLNCFMLFKSLMENLLEFKKK 5
            S   + F+ FKS +EN +  K K
Sbjct: 617  SSVFSIFVDFKSYVENAIGNKIK 639



 Score = 27.7 bits (60), Expect(2) = 6e-54
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -3

Query: 1920 NHNYVYRFTPLPFPNVSNFVSTKLDGSNFLVWKDQLSSILISTNLYGLL 1774
            N N    +  L   N+ + V  KL  SN+L W+   + IL    L G++
Sbjct: 25   NLNTSQMYHSLTIQNIGSMVPIKLRRSNYLPWRALFAPILRRYKLLGIV 73


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score =  205 bits (522), Expect(2) = 6e-54
 Identities = 158/573 (27%), Positives = 259/573 (45%), Gaps = 5/573 (0%)
 Frame = -2

Query: 1714 PIYLEWRTLDQFVGSCINATISPSLATELLGKSIARDKWLHLSKIFTQQFFARKSQLRGQ 1535
            P Y  W   DQ V       +S  + + ++G   + + W++L+K F +   +R  +L+ +
Sbjct: 74   PDYQAWFRSDQVV-------MSEDILSVVVGSKTSHEVWMNLAKHFNRISSSRIFELQRR 126

Query: 1534 LHSIQRGHYSIFDYLHQLKTISDSLAEIGEPVQDDDLVMYTLSGLGSEYAHFVITMQNRE 1355
            LHS+ +   ++ +YL  LKTI D LA +G PV +   +   + GL  EY   + +++   
Sbjct: 127  LHSLSKEGKTMEEYLRYLKTICDQLASVGSPVAEKMKIFAMVHGLTREYEPLITSLEGTL 186

Query: 1354 VPL---SFAKLRSRLINHEQWLKDQENAIYSPLIADPSNSAFFVRKQQNTFXXXXXXXXX 1184
                  S+  +  RL N +  L+       SP +A             NTF         
Sbjct: 187  DAFPGPSYEDVVYRLKNFDDRLQGYTVTDVSPHLAF------------NTFRSSNRGRGG 234

Query: 1183 XXXXXXXXXXXXXXXXXXXXXXXXXXPGFQFKKGEFNPNLTVDYGEIPS-QICNKKGHFA 1007
                                       G  F++   + + +V   E P  QIC K+GH+A
Sbjct: 235  RNNRGKGNFSTR---------------GRGFQQQFSSSSSSVSASEKPMCQICGKRGHYA 279

Query: 1006 NTFYYRYVPSMNNSPPMQKAFASFENALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCND 827
               ++R+  S  +S     AF+    AL     S                        +D
Sbjct: 280  LQCWHRFDDSYQHSEAAAAAFS----ALHITDVS------------------------DD 311

Query: 826  QGPIWIPDSGATSHMTNNTAIMTDAVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTS 647
             G  W+PDS AT+H+TNN++ +     ++G++  M  DG                +G+  
Sbjct: 312  SG--WVPDSAATAHITNNSSRLQQMQPYLGNDTVMASDGNFLPITHIGSANLPSTSGN-- 367

Query: 646  FDLHNVLYVPHIKHNLFSIANFTLENSCSYEFFPWGYEIKSLPSRKVLARGPNASE-LYP 470
              L +VL  P+I  +L S++  T +  CS+ F   G  +K   + KVL +G + SE LY 
Sbjct: 368  LPLKDVLVCPNIAKSLLSVSKLTKDYPCSFTFDADGVLVKDKATCKVLTKGSSTSEGLYK 427

Query: 469  IKSSALRRNTALSASIMSNSNTXXXXXXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSN 290
            +++   +   +      ++              +W+ RLGHP   V+  L    AIQ+ N
Sbjct: 428  LENPKFQMFYSTRQVKATDE-------------VWHMRLGHPNPQVLQLLANKKAIQI-N 473

Query: 289  KVFESVCTSCQLGKSHSLPFLVSPSRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDF 110
            K    +C SC+LGKS  LPF+ S   A +PL  VHCD+WGPAP  S  GF+Y+++F+D+ 
Sbjct: 474  KSTSKMCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQYYVIFIDNR 533

Query: 109  SKYNWIFPMKCRSESLNCFMLFKSLMENLLEFK 11
            S++ W +P+K +S+  + FM F+S +ENLL+ K
Sbjct: 534  SRFCWFYPLKHKSDFCSLFMKFQSFVENLLQTK 566



 Score = 36.2 bits (82), Expect(2) = 6e-54
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -3

Query: 1890 LPFPNVSNFVSTKLDGSNFLVWKDQLSSILISTNLYGLL 1774
            LP  N+SN V+ KL   N+++WK Q  S L    L G +
Sbjct: 10   LPSLNISNCVTVKLTDRNYILWKSQFESFLSGQGLLGFV 48


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
            gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1466

 Score =  215 bits (547), Expect(2) = 1e-53
 Identities = 156/598 (26%), Positives = 261/598 (43%), Gaps = 6/598 (1%)
 Frame = -2

Query: 1801 DQYQFVRFVDGSIEPQPQFLNHNNVPVVYPIYLEWRTLDQFVGSCINATISPSLATELLG 1622
            D Y+   F+DGS    P  +  +  P V P Y  W+  D+ + S +   IS S+   +  
Sbjct: 43   DGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSR 102

Query: 1621 KSIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIGEP 1442
             + A   W  L KI+    +   +QLR QL    +G  +I DY+  L T  D LA +G+P
Sbjct: 103  ATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKP 162

Query: 1441 VQDDDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINHEQWLKDQENAIYSPLI 1262
            +  D+ V   L  L  EY   +  +  ++ P +  ++  RL+NHE  +    +A   P+ 
Sbjct: 163  MDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPIT 222

Query: 1261 ADPSNSAFFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGFQFKKG 1082
            A+  +         N                                       +Q    
Sbjct: 223  ANAVSHRNTTTTNNNN-------------------NGNRNNRYDNRNNNNNSKPWQQSST 263

Query: 1081 EFNPNLTVDYGEIPS-QICNKKGHFAN--TFYYRYVPSMNNSPPMQKAFASFENALRFHS 911
             F+PN       +   QIC  +GH A   +    ++ S+N+  P             F  
Sbjct: 264  NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSP----------FTP 313

Query: 910  WSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMTDAVEFIGDE 731
            W P  ++A               +S N+    W+ DSGAT H+T++   ++    + G +
Sbjct: 314  WQPRANLALGSP-----------YSSNN----WLLDSGATHHITSDFNNLSLHQPYTGGD 358

Query: 730  QAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFTLENSCSYEF 551
              MV DG                      +LHN+LYVP+I  NL S+      N  S EF
Sbjct: 359  DVMVADGSTIPISHTGSTSLSTK--SRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEF 416

Query: 550  FPWGYEIKSLPSRKVLARGPNASELY--PIKSSALRRNTALSASIMSNSNTXXXXXXXXX 377
            FP  +++K L +   L +G    ELY  PI SS   +  +L AS  S +           
Sbjct: 417  FPASFQVKDLNTGVPLLQGKTKDELYEWPIASS---QPVSLFASPSSKAT---------- 463

Query: 376  XXLWNQRLGHPISTVINNLHTTGAIQLSNKVFESV-CTSCQLGKSHSLPFLVSPSRACQP 200
               W+ RLGHP  +++N++ +  ++ + N   + + C+ C + KS+ +PF  S   + +P
Sbjct: 464  HSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRP 523

Query: 199  LSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLFKSLMEN 26
            L  ++ D+W  +P +SH  ++Y+++FVD F++Y W++P+K +S+    F+ FK+L+EN
Sbjct: 524  LEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLEN 580



 Score = 25.8 bits (55), Expect(2) = 1e-53
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 1878 NVSNFVSTKLDGSNFLVWKDQLSSILISTNLYGLL 1774
            N+SN   TKL  +N+L+W  Q+ ++     L G L
Sbjct: 19   NMSNV--TKLTSTNYLMWSRQVHALFDGYELAGFL 51


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  215 bits (548), Expect(2) = 2e-53
 Identities = 147/568 (25%), Positives = 259/568 (45%), Gaps = 5/568 (0%)
 Frame = -2

Query: 1714 PIYLEWRTLDQFVGSCINATISPSLATELLGKSIARDKWLHLSKIFTQQFFARKSQLRGQ 1535
            P ++ WR  D+ + S I ++++P +  +++G   +   W  L   F     AR  QLR +
Sbjct: 144  PDFVMWRRFDRMILSWIYSSLTPEIMGQIVGYQSSHAXWFALEXXFXASSRARVMQLRLE 203

Query: 1534 LHSIQRGHYSIFDYLHQLKTISDSLAEIGEPVQDDDLVMYTLSGLGSEYAHFVITMQNRE 1355
              + ++G  ++ +Y+ +LK+++D+LA IGEPV D D ++  L GLG++Y   V ++  RE
Sbjct: 204  FQTTRKGSLTMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNSIVASLTARE 263

Query: 1354 VPLSFAKLRSRLINHEQWLKDQENAIYSPLIADPSNSAFFVRKQQNTFXXXXXXXXXXXX 1175
                           ++     E+ + S  +A P    F  ++                 
Sbjct: 264  ---------------DEDNSVAEDNVISANLATPQYQHFNNKRSSGQ------------- 295

Query: 1174 XXXXXXXXXXXXXXXXXXXXXXXPGFQFKKGEFNPNLTVDYGEIPSQICNKKGHFANTFY 995
                                    GF  ++G               Q+C K GH     Y
Sbjct: 296  --------------------NRQSGFNTRRGTNGGRSQSSQHRPQCQLCGKFGHTVVRCY 335

Query: 994  YRYVPSMNNSPP----MQKAFASFENALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCND 827
            +R+  +     P    +Q    + +N ++    SP+                    + +D
Sbjct: 336  HRFDINFQGYNPNMDTVQTNKPNAKNQVQAMMASPS--------------------TISD 375

Query: 826  QGPIWIPDSGATSHMTNNTAIMTDAVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTS 647
            +   W  D+GAT H++ +   ++D   ++G+++ +VG+GK                   +
Sbjct: 376  EA--WFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGKHLRILHTGTTFFPS--SSKT 431

Query: 646  FDLHNVLYVPHIKHNLFSIANFTLENSCSYEFFPWGYEIKSLPSRKVLARGPNASELYPI 467
            F L  VL+VP I  NL S++ F  +N+  +EF P  + +K   ++K+L +G     LY  
Sbjct: 432  FQLRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGLYRF 491

Query: 466  KSSALRRNTALSASIMSNSNTXXXXXXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNK 287
             +  +    A  +S    S+             W+ RLGHP   ++ ++ T+    +S++
Sbjct: 492  PARFVPSPAAFVSSSYDRSSNLSLTTTTTL---WHSRLGHPADNILKHILTS--CNISHQ 546

Query: 286  VFES-VCTSCQLGKSHSLPFLVSPSRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDF 110
              ++ VC +CQ  KSH LPF V  SRA  PL+L+H D+WGP    S  G +YFI+FVDDF
Sbjct: 547  CHKNNVCCACQFAKSHKLPFNVXVSRASHPLALLHADLWGPXSIPSTTGARYFILFVDDF 606

Query: 109  SKYNWIFPMKCRSESLNCFMLFKSLMEN 26
            S+++WI+P+  + ++L+ F+ FKSL+EN
Sbjct: 607  SRFSWIYPLHSKDQALSVFIKFKSLVEN 634



 Score = 24.6 bits (52), Expect(2) = 2e-53
 Identities = 9/34 (26%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
 Frame = -3

Query: 1854 KLDGSNFLVWKDQLSSILIST----NLYGLLMVP 1765
            KLD +N+++W+ Q+ +++ +     ++ GL + P
Sbjct: 100  KLDRNNYILWRTQMENVVFANGFEDHIEGLKICP 133


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
            Arabidopsis thaliana BAC gb|AF080119 and is a member of
            the reverse transcriptase family PF|00078 [Arabidopsis
            thaliana]
          Length = 1415

 Score =  213 bits (543), Expect = 5e-52
 Identities = 165/611 (27%), Positives = 265/611 (43%), Gaps = 11/611 (1%)
 Frame = -2

Query: 1804 IDQYQFVRFVDGSIEPQPQFLNHNNVPVVY----PIYLEWRTLDQFVGSCINATISPSLA 1637
            +   + + FV+G++    Q     N  V      P+Y  W   DQ V S +  T+S  + 
Sbjct: 37   LSSQKLIGFVNGAVNAPSQSRLVVNGEVTSEEPNPLYESWFCTDQLVRSWLFGTLSEEVL 96

Query: 1636 TELLGKSIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLA 1457
              +   S +R  W+ L++ F +   AR+  LR  L  + +       Y  + KTI D+L+
Sbjct: 97   GHVHNLSTSRQIWVSLAENFNKSSVAREFSLRQNLQLLSKKEKPFSVYCREFKTICDALS 156

Query: 1456 EIGEPVQDDDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINH---EQWLKDQE 1286
             IG+PV +   +   L+GLG +Y      +Q+     S +KL +   N    E    D +
Sbjct: 157  SIGKPVDESMKIFGFLNGLGRDYDPITTVIQS-----SLSKLPTPTFNDVVSEVQGFDSK 211

Query: 1285 NAIYSPLIADPSNSAFFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1106
               Y    +   + AF + + ++                                     
Sbjct: 212  LQSYEEAASVTPHLAFNIERSES-----------GSPQYNPNQKGRGRSGQNKGRGGYST 260

Query: 1105 PGFQFKKGEFNPNLTVDYGEIP-SQICNKKGHFANTFYYRYVPSMNNSPPMQKAFASFEN 929
             G  F + + +P ++   G  P  QIC + GH A   Y R+    NN     +AF++   
Sbjct: 261  RGRGFSQHQSSPQVS---GPRPVCQICGRTGHTALKCYNRFD---NNYQAEIQAFSTLRV 314

Query: 928  ALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMTDAV 749
            +                               +D G  W PDS AT+H+T++T  +  A 
Sbjct: 315  S-------------------------------DDTGKEWHPDSAATAHVTSSTNGLQSAT 343

Query: 748  EFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFTLEN 569
            E+ GD+  +VGDG                 G     L+ VL VP+I+ +L S++    + 
Sbjct: 344  EYEGDDAVLVGDGTYLPITHTGSTTIKSSNG--KIPLNEVLVVPNIQKSLLSVSKLCDDY 401

Query: 568  SCSYEFFPWGYEIKSLPSRKVLARGPNASELYPIKSS---ALRRNTALSASIMSNSNTXX 398
             C   F      I  L ++KV+  GP  + LY +++    AL  N   +A+         
Sbjct: 402  PCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVLENQEFVALYSNRQCAAT--------- 452

Query: 397  XXXXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSP 218
                     +W+ RLGH  S  + +L  + AIQ++      VC  CQ+GKS  LPFL+S 
Sbjct: 453  -------EEVWHHRLGHANSKALQHLQNSKAIQINKSRTSPVCEPCQMGKSSRLPFLISD 505

Query: 217  SRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLFKS 38
            SR   PL  +HCD+WGP+P +S+ G KY+ +FVDD+S+Y+W +P+  +SE L+ F+ F+ 
Sbjct: 506  SRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQK 565

Query: 37   LMENLLEFKKK 5
            L+EN L  K K
Sbjct: 566  LVENQLNTKIK 576


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score =  199 bits (506), Expect(2) = 4e-51
 Identities = 157/608 (25%), Positives = 253/608 (41%), Gaps = 12/608 (1%)
 Frame = -2

Query: 1798 QYQFVRFVDGSIEPQPQFLNHNNVPVVYPIYLEWRTLDQFVGSCINATISPSLATELLGK 1619
            Q   V  +DGS    P            P Y  W   D+ V S +  +    + + ++  
Sbjct: 53   QTSVVSDIDGSTSASPN-----------PEYYTWFKTDRVVKSWLLGSFLEDILSVVVNC 101

Query: 1618 SIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIGEPV 1439
            + + + W+ ++  F +   +R  +L+ +L ++ +   S+ +YL  LKTI D LA +G PV
Sbjct: 102  NTSHEVWISVANHFNRVSSSRLFELQRRLQNVSKRDKSMDEYLKDLKTICDQLASVGSPV 161

Query: 1438 QDDDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRS---RLINHEQWLKDQ-ENAIYS 1271
             +   +   L+GLG EY     T++N    L    L     +L  ++  L+   E    S
Sbjct: 162  TEKMKIFAALNGLGREYEPIKTTIENSMDALPGPSLEDVIPKLTGYDDRLQGYLEETAVS 221

Query: 1270 PLIA------DPSNSAFFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1109
            P +A      D SN++ +                                          
Sbjct: 222  PHVAFNITTSDDSNASGYFNAYNR---------------------GKGKSNRGRNSFSTR 260

Query: 1108 XPGFQFKKGEFNPNLTVDYG--EIPSQICNKKGHFANTFYYRYVPSMNNSPPMQKAFASF 935
              GF  +    N +     G   +  QIC K GH                 P  K +  F
Sbjct: 261  GRGFHQQISSTNSSSGSQSGGTSVVCQICGKMGH-----------------PALKCWHRF 303

Query: 934  ENALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMTD 755
             N+ ++     A +                    +  G  W+PDS AT+H+TN+   +  
Sbjct: 304  NNSYQYEELPRALAAMRITDIT------------DQHGNEWLPDSAATAHVTNSPRSLQQ 351

Query: 754  AVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFTL 575
            +  + G +  MV DG                +G+    L +VL  P I  +L S++  T 
Sbjct: 352  SQPYHGSDAVMVADGNFLPITHTGSTNLASSSGNVP--LTDVLVCPSITKSLLSVSKLTQ 409

Query: 574  ENSCSYEFFPWGYEIKSLPSRKVLARGPNASELYPIKSSALRRNTALSASIMSNSNTXXX 395
            +  C+ EF   G  I    ++K+L  G     LY +K  + +     S    S S+    
Sbjct: 410  DYPCTVEFDSDGVRINDKATKKLLIMGSTCDGLYCLKDDS-QFKAFFSTRQQSASDEV-- 466

Query: 394  XXXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPS 215
                     W++RLGHP   V+  L  T +I + NK  +S+C +CQLGKS  LPF+ S  
Sbjct: 467  ---------WHRRLGHPHPQVLQQLVKTNSISI-NKTSKSLCEACQLGKSTRLPFVSSSF 516

Query: 214  RACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLFKSL 35
             + +PL  VHCD+WGP+P  S  GF+Y+ VF+D +S+++WI+P+K +S+  N F+ F  L
Sbjct: 517  TSNRPLERVHCDLWGPSPITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFVAFHKL 576

Query: 34   MENLLEFK 11
            +EN L  K
Sbjct: 577  VENQLNHK 584



 Score = 33.1 bits (74), Expect(2) = 4e-51
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 1890 LPFPNVSNFVSTKLDGSNFLVWKDQLSSILISTNLYGLL 1774
            +P  N+SN V+  L   N+++WK Q  S L    L G +
Sbjct: 6    VPSLNISNCVTVTLTAKNYILWKSQFESFLDGQGLLGFV 44


>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score =  199 bits (505), Expect(2) = 1e-50
 Identities = 151/571 (26%), Positives = 257/571 (45%), Gaps = 5/571 (0%)
 Frame = -2

Query: 1708 YLEWRTLDQFVGSCINATISPSLATELLGKSIARDKWLHLSKIFTQQFFARKSQLRGQLH 1529
            +L+W  +DQ V + I  ++S      ++G + A++ WL L++ F +    RK  L+ +L 
Sbjct: 72   FLKWTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTRKYDLQKRLG 131

Query: 1528 SIQRGHYSIFDYLHQLKTISDSLAEIGEPVQDDDLVMYTLSGLGSEYAHFVITMQNREVP 1349
            +  +   ++  YL ++K I D L  IG PV + + +   L+GLG EY      +++    
Sbjct: 132  TCSKAGKTMDAYLSEVKNICDQLDSIGFPVTEQEKIFGVLNGLGKEYESIATVIEHSLDV 191

Query: 1348 LS---FAKLRSRLINHEQWLKDQE-NAIYSPLIADPSNSAFFVRKQQNTFXXXXXXXXXX 1181
                 F  +  +L   +  L     N+  +P +A  ++ ++  R   N+           
Sbjct: 192  YPGPCFDDVVYKLTTFDDKLSTYTANSEVTPHLAFYTDKSYSSRGNNNS----------- 240

Query: 1180 XXXXXXXXXXXXXXXXXXXXXXXXXPGFQFKKGEFNPNLTVDYGEIPSQICNKKGHFANT 1001
                                      GF  + G  + N + +  +   QIC K GH A  
Sbjct: 241  -------RGGRYGNFRGRGSYSSRGRGFHQQFGSGSNNGSGNGSKPTCQICRKYGHSAFK 293

Query: 1000 FYYRYVPSMNNSPP-MQKAFASFENALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQ 824
             Y R+    N  P  +  AFA    A+R    + A S                       
Sbjct: 294  CYTRF--EENYLPEDLPNAFA----AMRVSDQNQASSHE--------------------- 326

Query: 823  GPIWIPDSGATSHMTNNTAIMTDAVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSF 644
               W+PDS AT+H+TN T  + ++  + GD+  +VG+G                 G  + 
Sbjct: 327  ---WLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPLNISQG--TL 381

Query: 643  DLHNVLYVPHIKHNLFSIANFTLENSCSYEFFPWGYEIKSLPSRKVLARGPNASELYPIK 464
             L +VL  P I  +L S++  T +  CS+ F      IK   ++++L +G     LY +K
Sbjct: 382  PLEDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQQLLTQGNKHKGLYVLK 441

Query: 463  SSALRRNTALSASIMSNSNTXXXXXXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNKV 284
                +  T  S    S+ +             W+QRLGHP   V+ +L  T AI + NK 
Sbjct: 442  DVPFQ--TYYSTRQQSSDDEV-----------WHQRLGHPNKEVLQHLIKTKAIVV-NKT 487

Query: 283  FESVCTSCQLGKSHSLPFLVSPSRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSK 104
              ++C +CQ+GK   LPF+ S   + +PL  +HCD+WGPAP  S  GF+Y+++F+D++S+
Sbjct: 488  SSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDNYSR 547

Query: 103  YNWIFPMKCRSESLNCFMLFKSLMENLLEFK 11
            + W +P+K +S+  + F+LF+ L+EN  + K
Sbjct: 548  FTWFYPLKLKSDFFSVFVLFQQLVENQYQHK 578



 Score = 32.0 bits (71), Expect(2) = 1e-50
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 1878 NVSNFVSTKLDGSNFLVWKDQLSSILISTNLYGLL 1774
            N+S  V+ KL  +N+L+WK Q  S L S  L G +
Sbjct: 11   NISQVVTLKLTPTNYLLWKTQFESYLSSHLLLGFV 45


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  207 bits (527), Expect = 4e-50
 Identities = 166/614 (27%), Positives = 275/614 (44%), Gaps = 13/614 (2%)
 Frame = -2

Query: 1804 IDQYQFVRFVDGSIEP--QPQFLNHNNVP--VVYPIYLEWRTLDQFVGSCINATISPSLA 1637
            +   + + FV+G + P  Q + + +++V   V  P Y +W   DQ V S +  T+S  + 
Sbjct: 37   LSSQKLIGFVNGVVTPPAQTRLVVNDDVTSEVPNPQYEDWFCTDQLVRSWLFGTLSEEVL 96

Query: 1636 TELLGKSIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLA 1457
              +   + +R  W+ L++ F +   AR+  LR  L  + +   S+  Y    K I DSL+
Sbjct: 97   GHVHNLTTSRQIWISLAENFNKSSIAREFSLRRNLQLLTKKDKSLSVYCRDFKIICDSLS 156

Query: 1456 EIGEPVQDDDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINH---EQWLKDQE 1286
             IG+PV++   +   L+GLG EY      +Q+     S +KL +   N    E    D +
Sbjct: 157  SIGKPVEESMKIFGFLNGLGREYDPITTVIQS-----SLSKLPAPTFNDVISEVQGFDSK 211

Query: 1285 NAIYSPLIADPSNSAFFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1106
               Y   ++   + AF   +  +                                     
Sbjct: 212  LQSYDDTVSVNPHLAFNTERSNS----------------GAPQYNSNSRGRGRSGQNRGR 255

Query: 1105 PGFQFKKGEFNPNLTVD--YGEIP-SQICNKKGHFANTFYYRYVPSMNNSPPMQKAFASF 935
             G+  +   F+ + +     G+ P  QIC + GH A   Y R+  +  +  P Q AF+  
Sbjct: 256  GGYSTRGRGFSQHQSASPSSGQRPVCQICGRIGHTAIKCYNRFDNNYQSEVPTQ-AFS-- 312

Query: 934  ENALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMTD 755
              ALR                             ++ G  W PDS AT+H+T +T+ + +
Sbjct: 313  --ALRVS---------------------------DETGKEWYPDSAATAHITASTSGLQN 343

Query: 754  AVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFTL 575
            A  + G++  +VGDG                 G  +  L+ VL  P I+ +L S++    
Sbjct: 344  ATTYEGNDAVLVGDGTYLPITHVGSTTISSSKG--TIPLNEVLVCPAIQKSLLSVSKLCD 401

Query: 574  ENSCSYEFFPWGYEIKSLPSRKVLARGPNASELYPIKSS---ALRRNTALSASIMSNSNT 404
            +  C   F      I  L ++KV+++GP  + LY +++S   AL  N   +AS+ +    
Sbjct: 402  DYPCGVYFDANKVCIIDLTTQKVVSKGPRNNGLYMLENSEFVALYSNRQCAASMET---- 457

Query: 403  XXXXXXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLV 224
                        W+ RLGH  S ++  L T   IQ++      VC  CQ+GKS  L F  
Sbjct: 458  ------------WHHRLGHSNSKILQQLLTRKEIQVNKSRTSPVCEPCQMGKSTRLQFFS 505

Query: 223  SPSRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLF 44
            S  RA +PL  VHCD+WGP+P +S+ GFKY+ VFVDDFS+++W FP++ +S+ ++ F+ +
Sbjct: 506  SDFRALKPLDRVHCDLWGPSPVVSNQGFKYYAVFVDDFSRFSWFFPLRMKSKFISVFIAY 565

Query: 43   KSLMENLLEFKKKK 2
            + L+EN L  K K+
Sbjct: 566  QKLVENQLGTKIKE 579


>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
          Length = 1048

 Score =  201 bits (512), Expect(2) = 1e-49
 Identities = 153/598 (25%), Positives = 255/598 (42%), Gaps = 6/598 (1%)
 Frame = -2

Query: 1801 DQYQFVRFVDGSIEPQPQFLNHNNVPVVYPIYLEWRTLDQFVGSCINATISPSLATELLG 1622
            D Y+   F+DGS    P  +  +  P V P Y  W+  D+ + + +   IS S+   +  
Sbjct: 43   DGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYNAVLGAISMSVQPAVSR 102

Query: 1621 KSIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIGEP 1442
             + A   W  L KI+    +   +QLR QL    +G  +I DY+    T  D LA +G+P
Sbjct: 103  ATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGFVTRFDQLALLGKP 162

Query: 1441 VQDDDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINHEQWLKDQENAIYSPLI 1262
            +  D+ V   L  L  EY            P +  ++  RL+N E  +    +A   P+ 
Sbjct: 163  MDHDEQVERVLENLPEEYKPVKAC-----TPPTLTEIHERLLNQESKILAVSSATVIPIT 217

Query: 1261 ADPSNSAFFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGFQFKKG 1082
            A+  +         N                                       +Q    
Sbjct: 218  ANAVSHRNTTTTNNNN-------------------NGNRNNRYDNRNNNNNSKPWQQSST 258

Query: 1081 EFNPNLTVDYGEIPS-QICNKKGHFAN--TFYYRYVPSMNNSPPMQKAFASFENALRFHS 911
             F+PN       +   QIC  +GH A   +    ++ S+N+  P             F  
Sbjct: 259  NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPSSP----------FTP 308

Query: 910  WSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMTDAVEFIGDE 731
            W P  ++A               +S N+    W+ DSGAT H+T++   ++    + G +
Sbjct: 309  WQPRANLALGSP-----------YSSNN----WLLDSGATHHITSDFNNLSLHQPYTGGD 353

Query: 730  QAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFTLENSCSYEF 551
              MV DG                      +LHN+LYVP+I  NL S+      N  S EF
Sbjct: 354  DVMVADGSTIPISHTGSTSLSTK--SRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEF 411

Query: 550  FPWGYEIKSLPSRKVLARGPNASELY--PIKSSALRRNTALSASIMSNSNTXXXXXXXXX 377
            FP  +++K L +   L +G    ELY  PI SS   +  +L AS  S +           
Sbjct: 412  FPASFQVKDLNTGVPLLQGKTKDELYEWPIASS---QPVSLFASPSSKAT---------- 458

Query: 376  XXLWNQRLGHPISTVINNLHTTGAIQLSNKVFESV-CTSCQLGKSHSLPFLVSPSRACQP 200
               W+ RLGHP  +++N++ +  ++ + N   + + C+ C + KS+ +PF  S   + +P
Sbjct: 459  HSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRP 518

Query: 199  LSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLFKSLMEN 26
            L  ++ D+W  +P +SH  ++Y+++FVD F++Y W++P+K +S+    F+ FK+L+EN
Sbjct: 519  LEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLEN 575



 Score = 25.8 bits (55), Expect(2) = 1e-49
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 1878 NVSNFVSTKLDGSNFLVWKDQLSSILISTNLYGLL 1774
            N+SN   TKL  +N+L+W  Q+ ++     L G L
Sbjct: 19   NMSNV--TKLTSTNYLMWSRQVHALFDGYELAGFL 51


>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
          Length = 1198

 Score =  204 bits (519), Expect = 3e-49
 Identities = 160/555 (28%), Positives = 245/555 (44%), Gaps = 12/555 (2%)
 Frame = -2

Query: 1633 ELLGKSIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAE 1454
            +++G + +   W  L K F+    AR  QLR +L S ++G  S+ DY+ ++K  +DSLA 
Sbjct: 3    QIIGHNSSHSAWNALEKTFSSSSRARIMQLRLELQSTKKGSLSMIDYIMKVKGAADSLAA 62

Query: 1453 IGEPVQDDDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINHEQWLKDQEN--- 1283
            IGEPV + D VM  L GLGS+Y   V  +  ++  +S   + S L+  E  L+ Q +   
Sbjct: 63   IGEPVSEQDQVMNLLGGLGSDYNAVVTAINIKDDKISIEVVHSMLLAFEHRLEQQSSIEQ 122

Query: 1282 -AIYSPLIADPSNSAFFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1106
             +  S   A  SNS    R+                                        
Sbjct: 123  FSSISANYASSSNSRGSGRRYNG-----------------GRGQNHTPNISNYTYRGRGR 165

Query: 1105 PGFQFKKGEFNPNLTVDYGEIPS-QICNKKGHFANTFYYRYVPSMNNSPPMQKAFASFEN 929
             G   + G  N N +    E P  Q+C K GH     Y+++  S  +S   Q +  S  N
Sbjct: 166  GGRYGQNGRHNSNSS----EKPQCQLCGKFGHTVQICYHKFDISYQSS---QSSNTSPSN 218

Query: 928  ALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMTDAV 749
            A   +S  PA   +                S N     W  DSGA  H+T +   +T + 
Sbjct: 219  ASNPNS-IPAMVAS----------------SNNLAEDTWYLDSGANHHLTQSVGNLTSSS 261

Query: 748  EFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFTLEN 569
             + G ++  +G+GK                   SF L  V +V  I  NL S+A F L+N
Sbjct: 262  PYTGIDKVTIGNGKHLSISNTGSHRLLSD--SRSFHLKKVFHVHFISANLISVAKFYLDN 319

Query: 568  SCSYEFFPWGYEIKSLPSRKVLARGPNASELYPIKSSALRRNTALSASIMSNSNTXXXXX 389
            +  +EF    + +K L ++KVLA+G   + LY       ++   + A   S   +     
Sbjct: 320  NALFEFRSNSFFVKDLHTKKVLAQGKLENGLYRFPVLNSKKVAFVGAINSSTFYSHNSSI 379

Query: 388  XXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNK-------VFESVCTSCQLGKSHSLPF 230
                  LW+ RLGH  + ++  +  +  +            V  +VC+SCQL KSH LP 
Sbjct: 380  FDNKVKLWHHRLGHASTNIVTQIMQSCNVSFEKNKNTVCSTVCSTVCSSCQLAKSHRLPT 439

Query: 229  LVSPSRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFM 50
             +S S A +PL LVH D+WGPA   S  G +YFI+F+DD+S+Y W +P++ + ++L  F 
Sbjct: 440  HLSLSCASKPLELVHTDLWGPASVKSTSGARYFILFLDDYSRYTWFYPLQTKDQALPAFK 499

Query: 49   LFKSLMENLLEFKKK 5
             FK  +EN  + K K
Sbjct: 500  KFKLQVENQFDAKIK 514


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  192 bits (488), Expect(2) = 2e-48
 Identities = 147/582 (25%), Positives = 252/582 (43%), Gaps = 21/582 (3%)
 Frame = -2

Query: 1708 YLEWRTLDQFVGSCINATISPSLATELLGKSIARDKWLHLSKIFTQQFFARKSQLRGQLH 1529
            Y +W   DQ + + + +T+S  +   +L    A + W  + K F     +R  QLR +L 
Sbjct: 54   YQQWLIKDQTLFTWLLSTLSDGVLPRVLSCRHAHEVWDKIHKYFNSVLKSRARQLRSELK 113

Query: 1528 SIQRGHYSIFDYLHQLKTISDSLAEIGEPVQDDDLVMYTLSGLGSEYAHFVITMQNREVP 1349
            + ++   S+ +YL ++K+I +SL  +G+ V + + V   L GL  E+  FV+ + +R   
Sbjct: 114  NTKKLSRSVNEYLLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFNSFVMMVYSRFDT 173

Query: 1348 LSFAKLRSRLINHEQWLKDQENAIYSPLIADPSNSAFFVRKQQNTFXXXXXXXXXXXXXX 1169
             +   + + L+     L++ +   +   +  PS SA     + N                
Sbjct: 174  PTVEDVEALLL-----LQEAQFEKFKQELTSPSVSANVAHTETNA------SDSNSEHES 222

Query: 1168 XXXXXXXXXXXXXXXXXXXXXPGFQFKKGEFNPNLTVDYGEIPSQICNKKGHFANTFYYR 989
                                  G    KG+       + G++  QIC K  H A   +YR
Sbjct: 223  QELGTEHYNVNANRGRGRGKGRGRGRGKGQAQ-----NQGKVKCQICAKPNHDAINCWYR 277

Query: 988  YVPSMNNSPPMQKAFASFENALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQ--GPI 815
            Y P   N    Q +   ++      S  P     Y                  DQ     
Sbjct: 278  YDPQAMN----QNSRGGYQVG---PSNRPQNFNPYMRPTAHLAMPQPYAMPNMDQFSNGA 330

Query: 814  WIPDSGATSHMTNNTAIMTDAVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTG-DTSFDL 638
            W PDSGA+ H+T N   ++ +  + G +Q ++G+G+                  +    L
Sbjct: 331  WYPDSGASHHLTYNPNNLSYSSPYTGQDQVVMGNGQGVSIHSLGQSQFHSPNEPNVKLTL 390

Query: 637  HNVLYVPHIKHNLFSIANFTLENSCSYEFFPWGYEIKSLPSRKVLARGP-NASELYPIKS 461
             ++L+VP+I  NL S++ F  +N+  +EF P+   +K   S++VL  G   A  LY  K 
Sbjct: 391  KDLLHVPNISKNLLSVSKFAQDNNVIFEFHPYHCFVKYQDSKQVLLEGTVGADGLYQFKP 450

Query: 460  SALRRNTALSASIMSNS-----------------NTXXXXXXXXXXXLWNQRLGHPISTV 332
                 N+  +++  S+S                 NT           +W+ RLGH  ++ 
Sbjct: 451  FKFLTNSGAASNSDSSSMSSSSQFSVFNNPVNCNNTVSVMQNGNVFQMWHLRLGHAHTSA 510

Query: 331  INNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPSRACQPLSLVHCDIWGPAPSIS 152
            + N+     I  SNK     CT C +GKSH L   +S +   +P  ++HCD+WGPAP +S
Sbjct: 511  VKNILNLCNIPFSNKTATLPCTFCCMGKSHRLHSPLSNTVYTKPFEVIHCDLWGPAPFVS 570

Query: 151  HLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLFKSLMEN 26
            + G+ Y+I FVD ++K+ WI+ +K +S++L  F  FK+L++N
Sbjct: 571  YYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQN 612



 Score = 30.8 bits (68), Expect(2) = 2e-48
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = -3

Query: 1863 VSTKLDGSNFLVWKDQLSSILISTNLYGLLMVP 1765
            ++ KLD  NFL+W  Q++ ++ + NL+  ++ P
Sbjct: 1    LTIKLDEKNFLLWSQQVNGVITAHNLHRFVVNP 33


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  192 bits (488), Expect(2) = 2e-48
 Identities = 147/582 (25%), Positives = 252/582 (43%), Gaps = 21/582 (3%)
 Frame = -2

Query: 1708 YLEWRTLDQFVGSCINATISPSLATELLGKSIARDKWLHLSKIFTQQFFARKSQLRGQLH 1529
            Y +W   DQ + + + +T+S  +   +L    A + W  + K F     +R  QLR +L 
Sbjct: 54   YQQWLIKDQTLFTWLLSTLSDGVLPRVLSCRHAHEVWDKIHKYFNSVLKSRARQLRSELK 113

Query: 1528 SIQRGHYSIFDYLHQLKTISDSLAEIGEPVQDDDLVMYTLSGLGSEYAHFVITMQNREVP 1349
            + ++   S+ +YL ++K+I +SL  +G+ V + + V   L GL  E+  FV+ + +R   
Sbjct: 114  NTKKLSRSVNEYLLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFNSFVMMVYSRFDT 173

Query: 1348 LSFAKLRSRLINHEQWLKDQENAIYSPLIADPSNSAFFVRKQQNTFXXXXXXXXXXXXXX 1169
             +   + + L+     L++ +   +   +  PS SA     + N                
Sbjct: 174  PTVEDVEALLL-----LQEAQFEKFKQELTSPSVSANVAHTETNA------SDSNSEHES 222

Query: 1168 XXXXXXXXXXXXXXXXXXXXXPGFQFKKGEFNPNLTVDYGEIPSQICNKKGHFANTFYYR 989
                                  G    KG+       + G++  QIC K  H A   +YR
Sbjct: 223  QELGTEHYNVNANRGRGRGKGRGRGRGKGQAQ-----NQGKVKCQICAKPNHDAINCWYR 277

Query: 988  YVPSMNNSPPMQKAFASFENALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQ--GPI 815
            Y P   N    Q +   ++      S  P     Y                  DQ     
Sbjct: 278  YDPQAMN----QNSRGGYQVG---PSNRPQNFNPYMRPTAHLAMPQPYAMPNMDQFSNGA 330

Query: 814  WIPDSGATSHMTNNTAIMTDAVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTG-DTSFDL 638
            W PDSGA+ H+T N   ++ +  + G +Q ++G+G+                  +    L
Sbjct: 331  WYPDSGASHHLTYNPNNLSYSSPYTGQDQVVMGNGQGVSIHSLGQSQFHSPNEPNVKLTL 390

Query: 637  HNVLYVPHIKHNLFSIANFTLENSCSYEFFPWGYEIKSLPSRKVLARGP-NASELYPIKS 461
             ++L+VP+I  NL S++ F  +N+  +EF P+   +K   S++VL  G   A  LY  K 
Sbjct: 391  KDLLHVPNISKNLLSVSKFAQDNNVIFEFHPYHCFVKYQDSKQVLLEGTVGADGLYQFKP 450

Query: 460  SALRRNTALSASIMSNS-----------------NTXXXXXXXXXXXLWNQRLGHPISTV 332
                 N+  +++  S+S                 NT           +W+ RLGH  ++ 
Sbjct: 451  FKFLTNSGAASNSDSSSMSSSSQFSVFNNPVNCNNTVSVMQNGNVFQMWHLRLGHAHTSA 510

Query: 331  INNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPSRACQPLSLVHCDIWGPAPSIS 152
            + N+     I  SNK     CT C +GKSH L   +S +   +P  ++HCD+WGPAP +S
Sbjct: 511  VKNILNLCNIPFSNKTATLPCTFCCMGKSHRLHSPLSNTVYTKPFEVIHCDLWGPAPFVS 570

Query: 151  HLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLFKSLMEN 26
            + G+ Y+I FVD ++K+ WI+ +K +S++L  F  FK+L++N
Sbjct: 571  YYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQN 612



 Score = 30.8 bits (68), Expect(2) = 2e-48
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = -3

Query: 1863 VSTKLDGSNFLVWKDQLSSILISTNLYGLLMVP 1765
            ++ KLD  NFL+W  Q++ ++ + NL+  ++ P
Sbjct: 1    LTIKLDEKNFLLWSQQVNGVITAHNLHRFVVNP 33


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7267767|emb|CAB81170.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1515

 Score =  199 bits (505), Expect = 1e-47
 Identities = 151/571 (26%), Positives = 257/571 (45%), Gaps = 5/571 (0%)
 Frame = -2

Query: 1708 YLEWRTLDQFVGSCINATISPSLATELLGKSIARDKWLHLSKIFTQQFFARKSQLRGQLH 1529
            +L+W  +DQ V + I  ++S      ++G + A++ WL L++ F +    RK  L+ +L 
Sbjct: 69   FLKWTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTRKYDLQKRLG 128

Query: 1528 SIQRGHYSIFDYLHQLKTISDSLAEIGEPVQDDDLVMYTLSGLGSEYAHFVITMQNREVP 1349
            +  +   ++  YL ++K I D L  IG PV + + +   L+GLG EY      +++    
Sbjct: 129  TCSKAGKTMDAYLSEVKNICDQLDSIGFPVTEQEKIFGVLNGLGKEYESIATVIEHSLDV 188

Query: 1348 LS---FAKLRSRLINHEQWLKDQE-NAIYSPLIADPSNSAFFVRKQQNTFXXXXXXXXXX 1181
                 F  +  +L   +  L     N+  +P +A  ++ ++  R   N+           
Sbjct: 189  YPGPCFDDVVYKLTTFDDKLSTYTANSEVTPHLAFYTDKSYSSRGNNNS----------- 237

Query: 1180 XXXXXXXXXXXXXXXXXXXXXXXXXPGFQFKKGEFNPNLTVDYGEIPSQICNKKGHFANT 1001
                                      GF  + G  + N + +  +   QIC K GH A  
Sbjct: 238  -------RGGRYGNFRGRGSYSSRGRGFHQQFGSGSNNGSGNGSKPTCQICRKYGHSAFK 290

Query: 1000 FYYRYVPSMNNSPP-MQKAFASFENALRFHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQ 824
             Y R+    N  P  +  AFA    A+R    + A S                       
Sbjct: 291  CYTRF--EENYLPEDLPNAFA----AMRVSDQNQASSHE--------------------- 323

Query: 823  GPIWIPDSGATSHMTNNTAIMTDAVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSF 644
               W+PDS AT+H+TN T  + ++  + GD+  +VG+G                 G  + 
Sbjct: 324  ---WLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPLNISQG--TL 378

Query: 643  DLHNVLYVPHIKHNLFSIANFTLENSCSYEFFPWGYEIKSLPSRKVLARGPNASELYPIK 464
             L +VL  P I  +L S++  T +  CS+ F      IK   ++++L +G     LY +K
Sbjct: 379  PLEDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQQLLTQGNKHKGLYVLK 438

Query: 463  SSALRRNTALSASIMSNSNTXXXXXXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNKV 284
                +  T  S    S+ +             W+QRLGHP   V+ +L  T AI + NK 
Sbjct: 439  DVPFQ--TYYSTRQQSSDDEV-----------WHQRLGHPNKEVLQHLIKTKAIVV-NKT 484

Query: 283  FESVCTSCQLGKSHSLPFLVSPSRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSK 104
              ++C +CQ+GK   LPF+ S   + +PL  +HCD+WGPAP  S  GF+Y+++F+D++S+
Sbjct: 485  SSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDNYSR 544

Query: 103  YNWIFPMKCRSESLNCFMLFKSLMENLLEFK 11
            + W +P+K +S+  + F+LF+ L+EN  + K
Sbjct: 545  FTWFYPLKLKSDFFSVFVLFQQLVENQYQHK 575


>gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Arabis alpina]
          Length = 2090

 Score =  196 bits (498), Expect = 8e-47
 Identities = 158/607 (26%), Positives = 263/607 (43%), Gaps = 14/607 (2%)
 Frame = -2

Query: 1804 IDQYQFVRFVDGSIEPQPQFLNHNNVPVVYPIYLEWRTLDQFVGSCINATISPSLATELL 1625
            +D Y     +DGS E     L  N+V  V P Y  W   D+ + S +   IS  L   + 
Sbjct: 50   LDGYALAGHLDGSKEIPAATLTTNDVVSVNPAYTLWTRQDRLIFSSLIGAISTPLQPLVS 109

Query: 1624 GKSIARDKWLHLSKIFTQQFFARKSQLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIGE 1445
              + + + W  L+  + +       QL+ QL    +   +I  Y+  + T  D LA +G 
Sbjct: 110  RATSSSEIWNTLASTYAKPSRGHIRQLKTQLKQWHKETKTIDVYVQGITTRLDQLAILGA 169

Query: 1444 PVQDDDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINHEQWLKDQENAI--YS 1271
             +  ++ +   L GL  EY + V  ++ R+ P +  +L  RL+NHE  L      +  + 
Sbjct: 170  AMGHEEQIDLILDGLPEEYKNVVDQVEGRDTPPTITELHERLLNHEAKLLSAMETLVPHG 229

Query: 1270 PLIADPSNSAFFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGFQF 1091
            P+ A+ +    F    +N                                     P   +
Sbjct: 230  PVTANAAQHRNFSNNNKNQ-----------------------SRNRTTNNQWQHSPSSNW 266

Query: 1090 KKGEFNPNLTVDYGEIP----SQICNKKGHFANTFYYRYVPSMNNSPPMQKAFASFENAL 923
            + G+   N     G  P     QIC  +GH A     R      +S        SF+++ 
Sbjct: 267  QSGQ---NRADSQGPRPYLGRCQICGIQGHSAK----RCSKLQRHSAKRCSKLQSFQSSA 319

Query: 922  R-----FHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTAIMT 758
            +     F SW P  ++A               +S ++    W+ DSGAT HMT++   ++
Sbjct: 320  QQQQSPFTSWQPRANLAMNSS-----------YSADN----WLLDSGATHHMTSDLHNLS 364

Query: 757  DAVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIANFT 578
                + G +   + DG                + D    LH VLYVP ++ NL S+    
Sbjct: 365  LHQPYRGSDGVTIADGSTIPITQTGFKSFPSNSRD--LQLHKVLYVPDLQKNLISVYRLC 422

Query: 577  LENSCSYEFFPWGYEIKSLPSRKVLARGPNASELY--PIKSSALRRNTALSASIMSNSNT 404
              N  S EFFP  +++K L +   L +G   +ELY  PI SS+    TA +AS  S +  
Sbjct: 423  NTNRVSVEFFPASFQVKDLSTETPLLQGRTINELYEWPISSSS---PTAFAASPSSTTTL 479

Query: 403  XXXXXXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNKVFESV-CTSCQLGKSHSLPFL 227
                        W+ RLGHP S + NN+ +  +I +S +  + + C+ C + K+H +PF 
Sbjct: 480  QS----------WHSRLGHPSSLIFNNIVSRFSIPISKQSSQPLSCSDCFINKTHKIPFS 529

Query: 226  VSPSRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFML 47
             S   + +PL  ++ D+W  +P +S   FKY+++FVD +++Y W++P+K +S+  + F+ 
Sbjct: 530  KSTITSSKPLEYIYSDVWS-SPILSLENFKYYLIFVDHYTRYTWLYPLKLKSQVKDTFIA 588

Query: 46   FKSLMEN 26
            FKSL+EN
Sbjct: 589  FKSLVEN 595



 Score = 95.5 bits (236), Expect = 2e-16
 Identities = 54/163 (33%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
 Frame = -2

Query: 505  LARGPNASELY--PIKSSALRRNTALSASIMSNSNTXXXXXXXXXXXLWNQRLGHPISTV 332
            L +G   +ELY  PI SS+    TA +AS  S +              W+ RLGHP S +
Sbjct: 1507 LLQGRTINELYEWPISSSS---PTAFAASPSSTTTLQS----------WHSRLGHPSSLI 1553

Query: 331  INNLHTTGAIQLSNKVFESV-CTSCQLGKSHSLPFLVSPSRACQPLSLVHCDIWGPAPSI 155
             NN+ +  +I +S +  + + C+ C + K+H +PF  S   + +PL  ++ D+W      
Sbjct: 1554 FNNIVSRFSIPISKQSSQPLSCSDCFINKTHKIPFSKSTITSSKPLEYIYSDVWS----- 1608

Query: 154  SHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFMLFKSLMEN 26
            SH+   Y+++FVD +++Y W++P+K +S+  + F+ FKSL+EN
Sbjct: 1609 SHI---YYLIFVDHYTRYTWLYPLKLKSQVKDTFIAFKSLVEN 1648


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  192 bits (488), Expect = 1e-45
 Identities = 152/560 (27%), Positives = 252/560 (45%), Gaps = 29/560 (5%)
 Frame = -2

Query: 1597 LHLSKIFTQQFFARKS-----QLRGQLHSIQRGHYSIFDYLHQLKTISDSLAEIGEPVQD 1433
            L LS+ F +Q+FA ++     Q + QL   ++G  +I +YL ++K   DSLA +G  +  
Sbjct: 102  LFLSQYFLEQYFASQTRAKAKQFKTQLQHTKKGGSTIDEYLAKIKVCVDSLASVGVSLST 161

Query: 1432 DDLVMYTLSGLGSEYAHFVITMQNREVPLSFAKLRSRLINHEQWLKDQENAIYSPLIADP 1253
             D V   L GL ++Y  FV ++  R    S  ++ + L+ HE  ++   N++ S   A  
Sbjct: 162  KDHVESILDGLPNDYESFVTSVILRNDDFSVEEIEALLMAHESRVEKNNNSLDSSPSAHV 221

Query: 1252 SNSA-----------FFVRKQQNTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1106
            ++S            ++    Q +                                    
Sbjct: 222  ASSNAVEKGNRFKQDYYAANSQGSHSGYNGGFGRGGDFGRRGGFYGGRGFNWNYNGRSNR 281

Query: 1105 PGFQFK--KGEFN---PNLTVDYGEIPS-QICNKKGHFANTFYYRYVPSMNNSPPMQKAF 944
             GF+ +  KG F    P  + +  E P+ Q+C K GH     YYR+    +++  + +  
Sbjct: 282  GGFRGRGNKGSFQARPPWNSDNQNEKPACQLCGKIGHVVAQCYYRF----DHTFQVPQNL 337

Query: 943  ASFENALR-FHSWSPAESMAYXXXXXXXXXXXXSHWSCNDQGPIWIPDSGATSHMTNNTA 767
            +S  ++ R ++S+SP  +                          W PDSGA++H+T N  
Sbjct: 338  SSRNSSPRAYYSFSPQVNGVIPTSEVFSDDN-------------WYPDSGASNHVTPNPE 384

Query: 766  IMTDAVEFIGDEQAMVGDGKXXXXXXXXXXXXXXXTGDTSFDLHNVLYVPHIKHNLFSIA 587
             +  + EF G  Q  VG+G                       L+++L+VP I  NL S++
Sbjct: 385  NLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVS 444

Query: 586  NFTLENSCSYEFFPWGYEIKSLPSRKVLARGPNASELYPIKSS--ALRRNTALSAS---- 425
             F  +N   +EF      +K   ++ VL  G     LY   SS  ALR   +LS S    
Sbjct: 445  KFAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVV 504

Query: 424  IMSNSNTXXXXXXXXXXXLWNQRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKS 245
              S S+            LW++RLGHP +  I N+ +   +   NK+  + C+SC LGK 
Sbjct: 505  ASSFSSKVCTTSLSSTFDLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKI 564

Query: 244  HSLPFLVSPSRACQPLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSES 65
            H  PF +S +   +PL L+H D+WGP   +S+ G++Y+I FVD FS+++WIF ++ +SE+
Sbjct: 565  HRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEA 624

Query: 64   LNCFMLFKSLMENLLEFKKK 5
            +  F+ FK+ +E   + K K
Sbjct: 625  IKTFVNFKTQVELQFDLKIK 644