BLASTX nr result

ID: Papaver31_contig00033636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00033636
         (843 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007027393.1| TBP-associated factor 8, putative [Theobroma...    63   5e-08
ref|XP_010260189.1| PREDICTED: transcription initiation factor T...    59   2e-07
ref|XP_002282259.1| PREDICTED: transcription initiation factor T...    56   7e-07
ref|XP_010937614.1| PREDICTED: transcription initiation factor T...    59   6e-06

>ref|XP_007027393.1| TBP-associated factor 8, putative [Theobroma cacao]
           gi|508715998|gb|EOY07895.1| TBP-associated factor 8,
           putative [Theobroma cacao]
          Length = 373

 Score = 63.2 bits (152), Expect(2) = 5e-08
 Identities = 40/79 (50%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = -3

Query: 805 FVLYNQLKFLGASYGSSGALNINW---SSG*VREIIQFVNCTEEIPFAWRVPQFSGTKNR 635
           F +   L+ LGASYG SGA  I      SG VREIIQFV   EEIPFA  VPQF   +NR
Sbjct: 90  FDITQSLEELGASYGFSGASEIGHCLAGSGAVREIIQFVGSKEEIPFAQPVPQFPVVRNR 149

Query: 634 KYHQKKIQMSERLDDEHIP 578
           K       M+E    +HIP
Sbjct: 150 KLIPSFEHMNETPPGKHIP 168



 Score = 22.3 bits (46), Expect(2) = 5e-08
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 828 LAGRTYCNLFYI 793
           LAGRT CN+F I
Sbjct: 81  LAGRTECNMFDI 92


>ref|XP_010260189.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
           [Nelumbo nucifera]
          Length = 369

 Score = 58.5 bits (140), Expect(2) = 2e-07
 Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
 Frame = -3

Query: 805 FVLYNQLKFLGASYGSSGALNINW---SSG*VREIIQFVNCTEEIPFAWRVPQFSGTKNR 635
           F +   L+ LG+S G SGA ++N    SSG VREI Q+V+  +EIPFA  VP+F  T+NR
Sbjct: 87  FDVIQGLEDLGSSQGFSGASDVNRCLASSGTVREISQYVSLEQEIPFARPVPRFPVTRNR 146

Query: 634 KYHQKKIQMSERLDDEHIP 578
           K     +Q+ E     HIP
Sbjct: 147 KPTPSFLQIGETPPGNHIP 165



 Score = 24.6 bits (52), Expect(2) = 2e-07
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 828 LAGRTYCNLFYII 790
           LAGRT+CN+F +I
Sbjct: 78  LAGRTHCNVFDVI 90


>ref|XP_002282259.1| PREDICTED: transcription initiation factor TFIID subunit 8 [Vitis
           vinifera]
          Length = 368

 Score = 56.2 bits (134), Expect(3) = 7e-07
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
 Frame = -3

Query: 805 FVLYNQLKFLGASYGSSGALNINW---SSG*VREIIQFVNCTEEIPFAWRVPQFSGTKNR 635
           F +   L+ LG+S G SGA  ++    SSG VREI+++VN  +EIPFA  VP+F   +N 
Sbjct: 84  FDVIRGLEDLGSSEGFSGASGVDQCIVSSGTVREIVEYVNSAKEIPFAQPVPRFPVVRNC 143

Query: 634 KYHQKKIQMSERLDDEHIP 578
           K     +QM E    +HIP
Sbjct: 144 KATPSFVQMGETPVGKHIP 162



 Score = 23.5 bits (49), Expect(3) = 7e-07
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 828 LAGRTYCNLFYII 790
           LAGRT CN+F +I
Sbjct: 75  LAGRTQCNVFDVI 87



 Score = 20.8 bits (42), Expect(3) = 7e-07
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 566 FPDCHTYI 543
           FPD HTYI
Sbjct: 168 FPDSHTYI 175


>ref|XP_010937614.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
           [Elaeis guineensis] gi|743760559|ref|XP_010937622.1|
           PREDICTED: transcription initiation factor TFIID subunit
           8-like [Elaeis guineensis]
          Length = 362

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = -3

Query: 805 FVLYNQLKFLGASYGSSGALNINW---SSG*VREIIQFVNCTEEIPFAWRVPQFSGTKNR 635
           F +   L+ LG S G SGA +I+    SSG VREI QFVN  EE+PFAW VP+F   +  
Sbjct: 86  FDVIQGLEDLGLSQGFSGASDIHRCLASSGVVREIGQFVNTAEEVPFAWPVPRFPIARIP 145

Query: 634 KYHQKKIQMSERLDDEHIPN 575
           K      Q+ E     HIPN
Sbjct: 146 KQTSSFAQIGEAPAGNHIPN 165


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