BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00030994
         (2625 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1405   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1335   0.0  
ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1332   0.0  
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...  1331   0.0  
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1330   0.0  
gb|KDO62286.1| hypothetical protein CISIN_1g001795mg [Citrus sin...  1328   0.0  
ref|XP_009366215.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1327   0.0  
gb|KDO62285.1| hypothetical protein CISIN_1g001795mg [Citrus sin...  1327   0.0  
ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof...  1326   0.0  
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...  1326   0.0  
ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1325   0.0  
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...  1322   0.0  
gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium r...  1321   0.0  
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...  1318   0.0  
ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1314   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1312   0.0  
ref|XP_011033373.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1309   0.0  
ref|XP_011069583.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1307   0.0  
ref|XP_010904633.1| PREDICTED: DNA-directed RNA polymerase 3B, c...  1306   0.0  
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...  1306   0.0  

>ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 956

 Score = 1405 bits (3636), Expect = 0.0
 Identities = 685/855 (80%), Positives = 766/855 (89%), Gaps = 4/855 (0%)
 Frame = -1

Query: 2610 GDGDD---RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSL 2440
            GDG+    R  +K+KY++LRRRQIK+ETEAWEK A EYR+L+REM EKKLAPNLPYVKSL
Sbjct: 102  GDGERGRLRDMEKRKYNALRRRQIKVETEAWEKTAAEYRELEREMCEKKLAPNLPYVKSL 161

Query: 2439 FLGWFESLRDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGC 2260
            FLGWFE LR+AI K+Q LQESKKQKAAYA  IGLLPADKMAVIVMHKMMGLLMTG E+G 
Sbjct: 162  FLGWFEPLREAIEKEQKLQESKKQKAAYAPYIGLLPADKMAVIVMHKMMGLLMTGQEEGY 221

Query: 2259 VRVVQAAVHIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIK 2080
            VRVVQAAVHIGEA+EQEVRIH FL+ +K Y+ G++ E   D+ + KEQ ILRKRVN L+K
Sbjct: 222  VRVVQAAVHIGEAIEQEVRIHNFLKKTKKYQGGKKIEGQGDDKVTKEQDILRKRVNILVK 281

Query: 2079 KQKVIEAQRLVTNE-ESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAF 1903
            K+K+IE Q+LV NE E   WGRDAQAKLGSRL+ELLTETA+V PPINQL DSP +IRPAF
Sbjct: 282  KKKLIEVQKLVKNENEIRPWGRDAQAKLGSRLIELLTETAYVQPPINQLGDSPREIRPAF 341

Query: 1902 RHTLKTIRKGSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGG 1723
            RHT +T+ K +G   GKRYGVIECD LV +GLD T RHM + Y+PMLIPPKKWKGY  GG
Sbjct: 342  RHTFRTLSKETGRRVGKRYGVIECDPLVGRGLDRTARHMVIPYVPMLIPPKKWKGYDKGG 401

Query: 1722 HLFLPSYVMRTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWAR 1543
            HLFLPSYVMRTHGA++QQ+A+K+VP KQMQ+VFEALDTLGRTKWRVN++VL V+E++WAR
Sbjct: 402  HLFLPSYVMRTHGAKRQQDAIKNVPGKQMQKVFEALDTLGRTKWRVNRKVLGVVESIWAR 461

Query: 1542 GGNVAGLVDREDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARK 1363
            GGN+AGLVDRED+ IPE+P S+D IE+QKWKW++ K KK NRERHAQRCDIELKLSVARK
Sbjct: 462  GGNMAGLVDREDIPIPEKPDSEDLIEMQKWKWNMRKTKKINRERHAQRCDIELKLSVARK 521

Query: 1362 MKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLAN 1183
            +KDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLAN
Sbjct: 522  IKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLAN 581

Query: 1182 LYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLR 1003
            LYAGGVDKL Y++R+ FV+NHLDDI DSA +PIDG RWWL+AEDPFQCLAAC+NLS++L+
Sbjct: 582  LYAGGVDKLSYDDRLDFVENHLDDIFDSADKPIDGNRWWLNAEDPFQCLAACINLSEALK 641

Query: 1002 SSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDI 823
            SSSP+T ISHLPIHQDGSCNGLQHYAALGR  LEAAAVNL+AGE+PADVYSEIAARVH I
Sbjct: 642  SSSPHTAISHLPIHQDGSCNGLQHYAALGRYQLEAAAVNLVAGEKPADVYSEIAARVHSI 701

Query: 822  MKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNI 643
            MK D  KDP T   A LA +LIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G+I
Sbjct: 702  MKMDAEKDPTTDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHI 761

Query: 642  TDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVV 463
            T+DRLLFSA+CYAAKVT+TAL EMFQAARSIMGWL DCAKVIASEN+PVRWTTPLGLPVV
Sbjct: 762  TNDRLLFSAACYAAKVTLTALEEMFQAARSIMGWLSDCAKVIASENQPVRWTTPLGLPVV 821

Query: 462  QPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAG 283
            QPY KP+RHL+RTSLQVLALQREGD V+VK+Q++AFPPNFVHSLDGSHMMMTAVACRDAG
Sbjct: 822  QPYLKPQRHLVRTSLQVLALQREGDLVEVKRQRTAFPPNFVHSLDGSHMMMTAVACRDAG 881

Query: 282  LHFAGVHDSFWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRG 103
            LHFAGVHDSFWTHACDVD+MN ILREKFVELYDMPILE LLESFQ SFP L+FPPLP+RG
Sbjct: 882  LHFAGVHDSFWTHACDVDRMNQILREKFVELYDMPILERLLESFQVSFPLLTFPPLPDRG 941

Query: 102  DFDLENVHESPYFFN 58
            DFDL+ V ESPYFFN
Sbjct: 942  DFDLKEVLESPYFFN 956


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 1335 bits (3456), Expect = 0.0
 Identities = 641/846 (75%), Positives = 741/846 (87%)
 Frame = -1

Query: 2595 RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESL 2416
            R  +++ Y  LRRRQ+K ETEAWE+M +EYR+++REM EKKLAPNLPYVK+LFLGWFE L
Sbjct: 136  RETERRNYGLLRRRQVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPL 195

Query: 2415 RDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAV 2236
            R+AI K+Q  Q +KKQKAAYA  I LLPADKMAVIVMHKMMGL+M GHE+GCVRVVQAAV
Sbjct: 196  REAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMMGHEEGCVRVVQAAV 255

Query: 2235 HIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQ 2056
             IG A+EQEVRIH+FLE +KN+ R +   +   +  ++E+ ILRKRV + I+K+K+IE Q
Sbjct: 256  QIGMAIEQEVRIHSFLEKTKNFERHKT--VGHSQEGLREKEILRKRVKSFIRKKKIIEVQ 313

Query: 2055 RLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRK 1876
            +LV NEE   WGRD QAKLGSRL+ELLTETA+V  P+NQ AD PPD+RPAFRHT KT+ K
Sbjct: 314  KLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTK 373

Query: 1875 GSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVM 1696
             SG    ++YGVIECD LV  GLD T +HM + Y+PMLIPPKKWKGY  GG+LFLPSYVM
Sbjct: 374  ESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVM 433

Query: 1695 RTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVD 1516
            RTHG+R+QQ+AVKSVPR+Q+Q+VFEALDTLG TKWR+N+RVL V+E++WARGGN+ GLVD
Sbjct: 434  RTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVD 493

Query: 1515 REDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYY 1336
            RE++ +PE+P ++D  EIQ WKW+  KAKK N+ERH+ RCD E+KLSVARKMKDEEGFYY
Sbjct: 494  RENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYY 553

Query: 1335 PHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKL 1156
            PHNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLGK+GLRWLKI LANLYAGGV+KL
Sbjct: 554  PHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKL 613

Query: 1155 PYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVIS 976
             Y+ R+ FVDNHLDD+ DSA  P++G RWWL+AEDPFQCLAAC+NLS++LRSSSP+TVIS
Sbjct: 614  SYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVIS 673

Query: 975  HLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDP 796
            HLPIHQDGSCNGLQHYAALGR+SLEA+AVNL+AGE+PADVYSEIAARVH+IMKRD +KDP
Sbjct: 674  HLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDP 733

Query: 795  ATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSA 616
            AT   A LA +LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL E+G ITD+RLLF+A
Sbjct: 734  ATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTA 793

Query: 615  SCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERH 436
            +CYAAKVT+ ALGE+FQAAR IM WLG+CAKVIASEN+PV+WTTPLGLPV+QPY K ERH
Sbjct: 794  ACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERH 853

Query: 435  LIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 256
            LIRTSLQVLALQREG  V ++KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL FAGVHDS
Sbjct: 854  LIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDS 913

Query: 255  FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHE 76
            FWTHACDVDKMN ILREKFVELY MPILENLLESFQTS PTL+FPPLP+RG+FDL  V E
Sbjct: 914  FWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLE 973

Query: 75   SPYFFN 58
            SPYFFN
Sbjct: 974  SPYFFN 979


>ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Gossypium
            raimondii] gi|763786877|gb|KJB53873.1| hypothetical
            protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score = 1332 bits (3447), Expect = 0.0
 Identities = 641/845 (75%), Positives = 748/845 (88%), Gaps = 2/845 (0%)
 Frame = -1

Query: 2586 KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 2407
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+L+REM EKKLAPNLPYVK LFLGWFE LR+A
Sbjct: 130  EKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREA 189

Query: 2406 IAKDQILQESKKQK--AAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAVH 2233
            IAK+Q +Q+ K +K  AAYA  I LLPADK+AVIVMHKMMGL+M   EDG V+VVQAAVH
Sbjct: 190  IAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVMGAEEDGYVQVVQAAVH 249

Query: 2232 IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 2053
            IG A+EQEVRIH+FLE +KNY+R  +  +D+ +   KE+ ILRKRVN+LI+++++ E Q+
Sbjct: 250  IGVAIEQEVRIHSFLEKTKNYQR--KQIVDEVQGASKEKEILRKRVNSLIRRRRLTEVQK 307

Query: 2052 LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 1873
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSP D+RPAFRH  KTI +G
Sbjct: 308  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLDVRPAFRHKFKTISRG 367

Query: 1872 SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 1693
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 368  PGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 427

Query: 1692 THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1513
            THG+R+QQEA+K V  K M++VFEALDTLG TKWRVN +VL V+E++WA GGN+AGLVDR
Sbjct: 428  THGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVESIWASGGNIAGLVDR 487

Query: 1512 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1333
             D+ IPE+P+S+D+ EIQ+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 488  NDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLSVARKMENEEGFYYP 547

Query: 1332 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1153
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANLY+GGV+KL 
Sbjct: 548  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLYSGGVEKLS 607

Query: 1152 YEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 973
            ++ R+ FVDNHLD+I DSA+ PI+G RWWL+AEDPFQCLAACMNLS++L+S+SP+++IS+
Sbjct: 608  HDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLSEALKSTSPHSMISY 667

Query: 972  LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 793
            LPIHQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDPA
Sbjct: 668  LPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSNKDPA 727

Query: 792  THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 613
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDRLLFSA+
Sbjct: 728  TNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRLLFSAA 787

Query: 612  CYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHL 433
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAKVIASEN+PVRWTTPLGLPVVQPY K ERHL
Sbjct: 788  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYYKSERHL 847

Query: 432  IRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 253
            IRT+LQVLALQREG+SV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL+FAGVHDSF
Sbjct: 848  IRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLYFAGVHDSF 907

Query: 252  WTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHES 73
            WTHACDV+KMN ILREKFVELY MP+LENLLESF+TS+PTL FPPLP RG+FDL  V +S
Sbjct: 908  WTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPPLPERGNFDLREVLKS 967

Query: 72   PYFFN 58
            PYFFN
Sbjct: 968  PYFFN 972


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
            gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
            superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score = 1331 bits (3445), Expect = 0.0
 Identities = 642/845 (75%), Positives = 746/845 (88%), Gaps = 2/845 (0%)
 Frame = -1

Query: 2586 KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 2407
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+LQREM EKKLAPNLPYVK LFLGWFE +R+A
Sbjct: 136  EKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREA 195

Query: 2406 IAKDQILQE--SKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAVH 2233
            IA++Q +Q+  SKK +AAYA  I LLPADKMAVIVMHKMMGL+M   E+G V+VVQAAVH
Sbjct: 196  IAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVMGAQENGFVQVVQAAVH 255

Query: 2232 IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 2053
            IG A+EQEVRIH FLE +KNY+R  +   D+ + L KE+ IL+KRVN+LI++++++E Q+
Sbjct: 256  IGVAIEQEVRIHNFLEKTKNYQR--KKTTDEVQGLSKEKEILKKRVNSLIRRRRLVEVQK 313

Query: 2052 LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 1873
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSPPD++PAFRH  KTI K 
Sbjct: 314  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKTISKD 373

Query: 1872 SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 1693
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 374  PGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 433

Query: 1692 THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1513
            THG+R+QQ+A+K V  K+MQ+VFEALDTLG TKWRVNK+VL V+E++WA GGN+AGLVDR
Sbjct: 434  THGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDR 493

Query: 1512 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1333
             D+ IPE+P S+D+ E Q+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 494  NDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYP 553

Query: 1332 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1153
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANL+AGGV+KL 
Sbjct: 554  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLS 613

Query: 1152 YEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 973
            ++ R+ FVDNHLDDI DSA+ PI+G RWWL+AEDPFQCLAAC+NLS+SL+SSSP++V+S+
Sbjct: 614  HDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSY 673

Query: 972  LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 793
            LPIHQDGSCNGLQHYAALGRDSLEAAAVNL+AGE+PADVYSEIA RVH+IMKRD  KDPA
Sbjct: 674  LPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPA 733

Query: 792  THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 613
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR+LF+A+
Sbjct: 734  TNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAA 793

Query: 612  CYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHL 433
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAKVIASEN+PV+WTTPLGLPVVQPY K ERHL
Sbjct: 794  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHL 853

Query: 432  IRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 253
            IRTSLQVLALQREGDSV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF
Sbjct: 854  IRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 913

Query: 252  WTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHES 73
            WTHACDV+KMN ILREKFVELY MP+LENL ES QTS+P+L FPPLP RG+FDL  V +S
Sbjct: 914  WTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREVLKS 973

Query: 72   PYFFN 58
            PYFFN
Sbjct: 974  PYFFN 978


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score = 1330 bits (3441), Expect = 0.0
 Identities = 636/846 (75%), Positives = 748/846 (88%)
 Frame = -1

Query: 2595 RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESL 2416
            R  KK+K++ LRRRQ+K ETEAWE+M  EY++L+ +M+EK+LAPNLP++K LFLGWF  L
Sbjct: 165  REMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPL 224

Query: 2415 RDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAV 2236
            R+AI ++Q +Q +KKQKAAYA  I LLPADK+AVIVMHKMMGL+M GHED CV+VVQAAV
Sbjct: 225  REAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAV 284

Query: 2235 HIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQ 2056
            HIG A+EQE+RIH+FLE +KNY+R ++   D +E L KE+ +LRKRVN+LIK ++V+EAQ
Sbjct: 285  HIGMAIEQEIRIHSFLEKTKNYKR-KKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQ 343

Query: 2055 RLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRK 1876
            +L+ NEE+  WGRD QAKLGSRL+ELL ETA+V  P+N    SPPD+RPAFRH  KTI K
Sbjct: 344  KLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILK 403

Query: 1875 GSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVM 1696
              G    KRYGV+ECD LV  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVM
Sbjct: 404  HPGQKTTKRYGVVECDPLVLAGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVM 463

Query: 1695 RTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVD 1516
            RTHG+R+QQEA+KSV    M++VFEALDTLG TKWRVNK+VL V+E++W  GGN+AGLVD
Sbjct: 464  RTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVD 523

Query: 1515 REDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYY 1336
            R D+ IPE+P S+D  E+QKWKWSV KAKK N+ERH+QRCD ELKLSVAR+MKDEEGFYY
Sbjct: 524  RNDVPIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYY 583

Query: 1335 PHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKL 1156
            PHNLDFRGRAYPMH HLNHLSSD+CRGVLEFAEGRPLGK+GLRWLKIHLANL++GGV+KL
Sbjct: 584  PHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKL 643

Query: 1155 PYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVIS 976
             ++ R+ FV+NHL +I DSA+ PI+G RWWL+AEDPFQCLAAC+NLS++L+SSSP++VIS
Sbjct: 644  SHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVIS 703

Query: 975  HLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDP 796
            HLPIHQDGSCNGLQHYAALGR++LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDP
Sbjct: 704  HLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDP 763

Query: 795  ATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSA 616
            + H  A LA +LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR LF+A
Sbjct: 764  SKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAA 823

Query: 615  SCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERH 436
            +CYAAKVT+TALGE+F+AARSIMGWLGDCAKVIASEN+PVRWTTPLGLPVVQPY K ERH
Sbjct: 824  ACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERH 883

Query: 435  LIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 256
            LIRTSLQVLALQREG SV+++KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS
Sbjct: 884  LIRTSLQVLALQREGKSVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 943

Query: 255  FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHE 76
            FWTHACDVD+MN ILR+KFVELY+MPILENLLESFQTS+PTLSFPPLP RG+FDLE V E
Sbjct: 944  FWTHACDVDEMNQILRKKFVELYNMPILENLLESFQTSYPTLSFPPLPERGNFDLEEVLE 1003

Query: 75   SPYFFN 58
            SPYFFN
Sbjct: 1004 SPYFFN 1009


>gb|KDO62286.1| hypothetical protein CISIN_1g001795mg [Citrus sinensis]
            gi|641843387|gb|KDO62287.1| hypothetical protein
            CISIN_1g001795mg [Citrus sinensis]
          Length = 1012

 Score = 1328 bits (3437), Expect = 0.0
 Identities = 634/846 (74%), Positives = 749/846 (88%)
 Frame = -1

Query: 2595 RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESL 2416
            R  KK+K++ LRRRQ+K ETEAWE+M  EY++L+ +M+EK+LAPNLP++K LFLGWF  L
Sbjct: 168  REMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPL 227

Query: 2415 RDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAV 2236
             +AI ++Q +Q +KKQKAAYA  I LLPADK+AVIVMHKMMGL+M GHED CV+VVQAAV
Sbjct: 228  SEAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAV 287

Query: 2235 HIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQ 2056
            HIG A+EQE+RIH+FLE +KNY+R ++   D +E L KE+ +LRKRVN+LIK ++V+EAQ
Sbjct: 288  HIGMAIEQEIRIHSFLEKTKNYKR-KKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQ 346

Query: 2055 RLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRK 1876
            +L+ NEE+  WGRD QAKLGSRL+ELL ETA+V  P+N    SPPD+RPAFRH  KTI K
Sbjct: 347  KLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILK 406

Query: 1875 GSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVM 1696
              G    KRYGV+ECD LV +GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVM
Sbjct: 407  HPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVM 466

Query: 1695 RTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVD 1516
            RTHG+R+QQEA+KSV    M++VFEALDTLG TKWRVNK+VL V+E++W  GGN+AGLVD
Sbjct: 467  RTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVD 526

Query: 1515 REDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYY 1336
            R D+LIPE+P S+D  E+QKWKWSV KAKK N+ERH+QRCD ELKLSVAR+MKDEEGFYY
Sbjct: 527  RNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYY 586

Query: 1335 PHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKL 1156
            PHNLDFRGRAYPMH HLNHLSSD+CRGVLEFAEGRPLGK+GLRWLKIHLANL++GGV+KL
Sbjct: 587  PHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKL 646

Query: 1155 PYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVIS 976
             ++ R+ FV+NHL +I DSA+ PI+G RWWL+AEDPFQCLAAC+NLS++L+SSSP++VIS
Sbjct: 647  SHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVIS 706

Query: 975  HLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDP 796
            HLPIHQDGSCNGLQHYAALGR++LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDP
Sbjct: 707  HLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDP 766

Query: 795  ATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSA 616
            + H  A LA +LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR LF+A
Sbjct: 767  SKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAA 826

Query: 615  SCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERH 436
            +CYAAKVT+TALGE+F+AARSIMGWLGDCAKVIASEN+PVRWTTPLGLPVVQPY K ERH
Sbjct: 827  ACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERH 886

Query: 435  LIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 256
            LIRTSLQVLALQREG+ V+++KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS
Sbjct: 887  LIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 946

Query: 255  FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHE 76
            FWTHACDVD+MN ILR+KFVELY+MP+LENLLESFQTS+PTLSFPPLP RG+FDLE V E
Sbjct: 947  FWTHACDVDEMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPPLPERGNFDLEEVLE 1006

Query: 75   SPYFFN 58
            SPYFFN
Sbjct: 1007 SPYFFN 1012


>ref|XP_009366215.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Pyrus x
            bretschneideri]
          Length = 972

 Score = 1327 bits (3435), Expect = 0.0
 Identities = 635/842 (75%), Positives = 738/842 (87%)
 Frame = -1

Query: 2583 KKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDAI 2404
            ++KY+ LRRRQIK ETEAWE+M +EY+DL+R M EKKLAP+LPYVK+LFLGWFE LR+AI
Sbjct: 132  RRKYNLLRRRQIKAETEAWERMVEEYKDLERVMREKKLAPSLPYVKTLFLGWFEPLREAI 191

Query: 2403 AKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAVHIGE 2224
            A++Q +Q++KK KAA+A  I LLP DKMA+IVMHKMMGL+M G++DGCV+VVQAAVHIG 
Sbjct: 192  AREQQVQQTKKHKAAFAPHIDLLPPDKMALIVMHKMMGLVMVGNQDGCVQVVQAAVHIGM 251

Query: 2223 AVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRLVT 2044
            A+EQEVRIH+FLE +KN++R +    D+D +LIKE+ ILRKRVN LIK++++ E Q+L+ 
Sbjct: 252  AIEQEVRIHSFLEKTKNFQRKKTAVADED-SLIKEKEILRKRVNVLIKRKRLREVQKLLV 310

Query: 2043 NEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGSGP 1864
             EE   WGRD QAKLGSRL+ELLTETA+V PP+NQLAD PPD+RPAFRH  K   K  G 
Sbjct: 311  KEEFKPWGRDTQAKLGSRLIELLTETAYVQPPLNQLADGPPDVRPAFRHRFKAAAKTPGQ 370

Query: 1863 GCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRTHG 1684
               K YGVIECD LV  GLD T +HM + Y+PML+PP+KWKGY  GGHLFLPSYVMRTHG
Sbjct: 371  KLVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPRKWKGYDKGGHLFLPSYVMRTHG 430

Query: 1683 ARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDREDL 1504
            +R+Q + ++++  KQMQ+VFEALD LG TKWRVNK+VL V+E++WARGGN+AGLVDRED+
Sbjct: 431  SRKQVDTMRNISGKQMQKVFEALDMLGSTKWRVNKKVLNVVESIWARGGNIAGLVDREDV 490

Query: 1503 LIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHNL 1324
             +P++P  +   EIQ+WKWSV KAKK N+ERH+ RCD ELKLSVARKMKDEEGFYYPHNL
Sbjct: 491  PVPDKPPLEGLTEIQEWKWSVRKAKKINQERHSLRCDTELKLSVARKMKDEEGFYYPHNL 550

Query: 1323 DFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPYEE 1144
            DFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLGK+GLRWLKIHLANLYAGGV+KL YEE
Sbjct: 551  DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEE 610

Query: 1143 RVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHLPI 964
            R  FVD+H+DDI DSA  P++G RWWL+AEDP QCLAAC+NLS++L S SP+TVISHLPI
Sbjct: 611  RHAFVDHHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPI 670

Query: 963  HQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPATHS 784
            HQDGSCNGLQHYAALGRDSLEAAAVNL+AGE+PADVYSEIAARVH+IM+RD +KDP T  
Sbjct: 671  HQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAARVHEIMERDSNKDPTTSP 730

Query: 783  AARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASCYA 604
             A LA +L++Q+DRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G ITDDRLLF+A+CYA
Sbjct: 731  NALLARVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGFITDDRLLFTAACYA 790

Query: 603  AKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHLIRT 424
            AKVT+ ALGE+FQAAR IMGWLGDCAKVIASEN+PVRWTTPLGLPVVQPY K ERHLIRT
Sbjct: 791  AKVTLAALGEIFQAARGIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRT 850

Query: 423  SLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTH 244
            SLQVLALQRE +S+DV+KQ++AFPPNFVHSLDGSHMMMTA+ACRDAGL FAGVHDSFWTH
Sbjct: 851  SLQVLALQRESNSIDVRKQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTH 910

Query: 243  ACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHESPYF 64
            ACDVD+MN ILREKF+ELY MPILENLLESFQ S+P L+FPPLP RGDFDL+ V ESPYF
Sbjct: 911  ACDVDQMNEILREKFIELYSMPILENLLESFQASYPALTFPPLPERGDFDLQEVLESPYF 970

Query: 63   FN 58
            FN
Sbjct: 971  FN 972


>gb|KDO62285.1| hypothetical protein CISIN_1g001795mg [Citrus sinensis]
          Length = 1012

 Score = 1327 bits (3434), Expect = 0.0
 Identities = 633/846 (74%), Positives = 749/846 (88%)
 Frame = -1

Query: 2595 RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESL 2416
            R  KK+K++ LRRRQ+K ETEAWE+M  EY++L+ +M+EK+LAPNLP++K LFLGWF  L
Sbjct: 168  REMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPL 227

Query: 2415 RDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAV 2236
             +AI ++Q +Q +KKQKAAYA  I LLPADK+AVIVMHKMMGL+M GHED CV+VVQAAV
Sbjct: 228  SEAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAV 287

Query: 2235 HIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQ 2056
            HIG A+EQE+RIH+FLE +KNY+R ++   D +E L KE+ +LRKRVN+LIK ++V+EAQ
Sbjct: 288  HIGMAIEQEIRIHSFLEKTKNYKR-KKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQ 346

Query: 2055 RLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRK 1876
            +L+ NEE+  WGRD QAKLGSRL+ELL ETA+V  P+N    SPPD+RPAFRH  KTI K
Sbjct: 347  KLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILK 406

Query: 1875 GSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVM 1696
              G    KRYGV+ECD LV +GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVM
Sbjct: 407  HPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVM 466

Query: 1695 RTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVD 1516
            RTHG+R+QQEA+KSV    M++VFEALDTLG TKWRVNK+VL V+E++W  GGN+AGLVD
Sbjct: 467  RTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVD 526

Query: 1515 REDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYY 1336
            R D+LIPE+P S+D  E+QKWKWSV KAKK N+ERH+QRCD ELKLSVAR+MKDEEGFYY
Sbjct: 527  RNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYY 586

Query: 1335 PHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKL 1156
            PHNLDFRGRAYPMH HLNHLSSD+CRGVLEFAEGRPLGK+GLRWLKIHLANL++GGV+KL
Sbjct: 587  PHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKL 646

Query: 1155 PYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVIS 976
             ++ R+ FV+NHL +I DSA+ PI+G RWWL+AEDPFQCLAAC+NLS++L+SSSP++VIS
Sbjct: 647  SHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVIS 706

Query: 975  HLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDP 796
            HLPIHQDGSCNGLQHYAALGR+++EAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDP
Sbjct: 707  HLPIHQDGSCNGLQHYAALGRNTVEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDP 766

Query: 795  ATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSA 616
            + H  A LA +LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR LF+A
Sbjct: 767  SKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAA 826

Query: 615  SCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERH 436
            +CYAAKVT+TALGE+F+AARSIMGWLGDCAKVIASEN+PVRWTTPLGLPVVQPY K ERH
Sbjct: 827  ACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERH 886

Query: 435  LIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 256
            LIRTSLQVLALQREG+ V+++KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS
Sbjct: 887  LIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 946

Query: 255  FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHE 76
            FWTHACDVD+MN ILR+KFVELY+MP+LENLLESFQTS+PTLSFPPLP RG+FDLE V E
Sbjct: 947  FWTHACDVDEMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPPLPERGNFDLEEVLE 1006

Query: 75   SPYFFN 58
            SPYFFN
Sbjct: 1007 SPYFFN 1012


>ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
            gi|508784241|gb|EOY31497.1| DNA/RNA polymerases
            superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score = 1327 bits (3433), Expect = 0.0
 Identities = 642/846 (75%), Positives = 746/846 (88%), Gaps = 3/846 (0%)
 Frame = -1

Query: 2586 KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 2407
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+LQREM EKKLAPNLPYVK LFLGWFE +R+A
Sbjct: 14   EKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREA 73

Query: 2406 IAKDQILQE--SKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAVH 2233
            IA++Q +Q+  SKK +AAYA  I LLPADKMAVIVMHKMMGL+M   E+G V+VVQAAVH
Sbjct: 74   IAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVMGAQENGFVQVVQAAVH 133

Query: 2232 IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 2053
            IG A+EQEVRIH FLE +KNY+R  +   D+ + L KE+ IL+KRVN+LI++++++E Q+
Sbjct: 134  IGVAIEQEVRIHNFLEKTKNYQR--KKTTDEVQGLSKEKEILKKRVNSLIRRRRLVEVQK 191

Query: 2052 LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 1873
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSPPD++PAFRH  KTI K 
Sbjct: 192  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKTISKD 251

Query: 1872 SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 1693
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 252  PGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 311

Query: 1692 THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1513
            THG+R+QQ+A+K V  K+MQ+VFEALDTLG TKWRVNK+VL V+E++WA GGN+AGLVDR
Sbjct: 312  THGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDR 371

Query: 1512 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1333
             D+ IPE+P S+D+ E Q+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 372  NDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYP 431

Query: 1332 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1153
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANL+AGGV+KL 
Sbjct: 432  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLS 491

Query: 1152 YEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 973
            ++ R+ FVDNHLDDI DSA+ PI+G RWWL+AEDPFQCLAAC+NLS+SL+SSSP++V+S+
Sbjct: 492  HDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSY 551

Query: 972  LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 793
            LPIHQDGSCNGLQHYAALGRDSLEAAAVNL+AGE+PADVYSEIA RVH+IMKRD  KDPA
Sbjct: 552  LPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPA 611

Query: 792  THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 613
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR+LF+A+
Sbjct: 612  TNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAA 671

Query: 612  CYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHL 433
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAKVIASEN+PV+WTTPLGLPVVQPY K ERHL
Sbjct: 672  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHL 731

Query: 432  IRTSLQVLALQREGDS-VDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 256
            IRTSLQVLALQREGDS V+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS
Sbjct: 732  IRTSLQVLALQREGDSVVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 791

Query: 255  FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHE 76
            FWTHACDV+KMN ILREKFVELY MP+LENL ES QTS+P+L FPPLP RG+FDL  V +
Sbjct: 792  FWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREVLK 851

Query: 75   SPYFFN 58
            SPYFFN
Sbjct: 852  SPYFFN 857


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score = 1326 bits (3432), Expect = 0.0
 Identities = 633/843 (75%), Positives = 735/843 (87%)
 Frame = -1

Query: 2586 KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 2407
            +K+KY+ LRRRQI+ ETEAWE+MA EYR L REM E+KLAPNLPYVK L LGWFE L++A
Sbjct: 41   EKRKYNLLRRRQIREETEAWERMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEA 100

Query: 2406 IAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAVHIG 2227
            I K+Q +++SKKQK+A++  I LLPADKMAVIVMHKMMGLLM GHEDGCVRVVQAAV IG
Sbjct: 101  IEKEQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLMVGHEDGCVRVVQAAVQIG 160

Query: 2226 EAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRLV 2047
             A+EQEVRIH FLE +KNY+R ++   +  E + KE+ +LRKRVN+LI++++++E Q LV
Sbjct: 161  MAIEQEVRIHNFLEKTKNYQR-KKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLV 219

Query: 2046 TNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGSG 1867
              +E+  W R  QAKLGSRL+ELLTETA+V PP+NQ  D PPD+RPAFRH  KT+ K  G
Sbjct: 220  KQDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPG 279

Query: 1866 PGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRTH 1687
                K+YGVIECD L+  GLDGT +HM + Y PML+PPKKWKGY  GGHLFLPSYVMRTH
Sbjct: 280  QKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTH 339

Query: 1686 GARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDRED 1507
            G+RQQQ AV+SVP KQMQ+VFEALDTLG TKWRVN+R+L+V+E +W  GGN+AGLVDRED
Sbjct: 340  GSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDRED 399

Query: 1506 LLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHN 1327
            + IPE+P SDD  EIQKWKWSV KAKK N+ERH+QRCD ELKLSVARK+KDEEGFYYPHN
Sbjct: 400  IPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHN 459

Query: 1326 LDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPYE 1147
            LDFRGRAYPMH HL HLSSDLCRGVLEF EGRPLGK+GLRWLKIHLANLY+GGV+KL ++
Sbjct: 460  LDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHD 519

Query: 1146 ERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHLP 967
             R+ FV+NHL +I DSA+ P++GKRWWL AEDPFQCLAAC+NLS++L S+SP+TVISHLP
Sbjct: 520  GRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLP 579

Query: 966  IHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPATH 787
            IHQDGSCNGLQHYAALGRD+LEAAAVNL+A E+P+DVYSEIA RVH+I++RD +KDPAT+
Sbjct: 580  IHQDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATN 639

Query: 786  SAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASCY 607
              A LA +L+DQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G+ITDDRLLFSA+CY
Sbjct: 640  PHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACY 699

Query: 606  AAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHLIR 427
             AKVT+TALGE+FQAAR IM WLGDCAK+IASE++PV+WTTPLGLPVVQPY K ERHLI+
Sbjct: 700  TAKVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIK 759

Query: 426  TSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWT 247
            TSLQ+LALQREG SV V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL FAGVHDSFWT
Sbjct: 760  TSLQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWT 819

Query: 246  HACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHESPY 67
            HA DVD MN ILREKFVELY+MPILENLLE FQTS+PTL FPPLP RG+FDL+ V  SPY
Sbjct: 820  HATDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLQFPPLPERGNFDLQKVLRSPY 879

Query: 66   FFN 58
            FFN
Sbjct: 880  FFN 882


>ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Populus
            euphratica]
          Length = 983

 Score = 1325 bits (3429), Expect = 0.0
 Identities = 633/843 (75%), Positives = 736/843 (87%)
 Frame = -1

Query: 2586 KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 2407
            +K+KY+ LRRRQI+ ETEAWE+MA EYR L REM E+KLAPNLPYVK L LGWFE L++A
Sbjct: 142  EKRKYNLLRRRQIREETEAWERMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEA 201

Query: 2406 IAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAVHIG 2227
            I K+Q +++SKKQK+A++  I LLPADKMAVIVMHKMMGLLM GHEDGCVRVVQAAV IG
Sbjct: 202  IEKEQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLMVGHEDGCVRVVQAAVQIG 261

Query: 2226 EAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRLV 2047
             A+EQEVRIH FLE +KN++R ++   D  E++ KE+ +LRKRVN+LI++++++E Q LV
Sbjct: 262  MAIEQEVRIHNFLEKTKNHQR-KKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLV 320

Query: 2046 TNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGSG 1867
              +E+  W R  QAKLGSRL+ELLTETA+V PP+NQ  D PPD+RPAFRH  KT+ K  G
Sbjct: 321  KQDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPG 380

Query: 1866 PGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRTH 1687
                K+YGVIECD L+  GLDGT +HM + Y PML+PPKKWKGY  GGHLFLPSY+MRTH
Sbjct: 381  QKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYIMRTH 440

Query: 1686 GARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDRED 1507
            G+RQQQ AV+SVP KQMQ+VFEALDTLG TKWRVN+R+L+V+E +W  GGN+AGLVDRED
Sbjct: 441  GSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDRED 500

Query: 1506 LLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHN 1327
            + IPE+P SDD  EIQKWKWSV KAKK N+ERH+QRCD ELKLSVARK+KDEEGFYYPHN
Sbjct: 501  IPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHN 560

Query: 1326 LDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPYE 1147
            LDFRGRAYPMH HL HLSSDLCRGVLEF EGRPLGK+GLRWLKIHLANLY+GGV+KL ++
Sbjct: 561  LDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHD 620

Query: 1146 ERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHLP 967
             R+ FV+NHL +I DSA+ P++GKRWWL AEDPFQCLAAC+NLS++L S+SP+TVISHLP
Sbjct: 621  GRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLP 680

Query: 966  IHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPATH 787
            IHQDGSCNGLQHYAALGRDSLEAAAVNL+A E+P+DVYSEIA RVH+I++RD +KDPAT+
Sbjct: 681  IHQDGSCNGLQHYAALGRDSLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATN 740

Query: 786  SAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASCY 607
              A LA +L+DQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G+ITDDRLLFSA+CY
Sbjct: 741  PHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACY 800

Query: 606  AAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHLIR 427
             AKVT+TALGE+FQAAR IM WLGDCAK+IASE++PV+WTTPLGLPVVQPY K ERHLI+
Sbjct: 801  TAKVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKRERHLIK 860

Query: 426  TSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWT 247
            TSLQ+LALQREG SV V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL FAGVHDSFWT
Sbjct: 861  TSLQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWT 920

Query: 246  HACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHESPY 67
            HA DVD MN ILREKFVELY+MPILENLLE FQTS+PTL FPPLP RG+FDL+ V  SPY
Sbjct: 921  HARDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFPPLPERGNFDLQKVLRSPY 980

Query: 66   FFN 58
            FFN
Sbjct: 981  FFN 983


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score = 1322 bits (3421), Expect = 0.0
 Identities = 632/846 (74%), Positives = 747/846 (88%)
 Frame = -1

Query: 2595 RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESL 2416
            R  KK+K++ LRRRQ+K ETEAWE+M  EY++L+ +M+EK+LAPNLP++K LFLGWF  L
Sbjct: 168  REMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPL 227

Query: 2415 RDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAV 2236
             +AI ++Q +Q +KKQKAAYA  I LLPADKMAVIVMHKMMGL+M GHED CV+VVQAAV
Sbjct: 228  SEAIEREQKMQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMAGHEDRCVQVVQAAV 287

Query: 2235 HIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQ 2056
            HIG A+EQE+RIH+FLE +KNY+R ++   D +E L KE+ +LRKRVN+LIK ++V+EAQ
Sbjct: 288  HIGMAIEQEIRIHSFLEKTKNYKR-KKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQ 346

Query: 2055 RLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRK 1876
            +L+ NEE+  WGRD QAKLGSRL+ELL ETA+V  P+N    SPPD+RPAFRH  KTI K
Sbjct: 347  KLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILK 406

Query: 1875 GSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVM 1696
              G    KRYGV+ECD LV +GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVM
Sbjct: 407  HPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVM 466

Query: 1695 RTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVD 1516
            RTHG+R+QQEA+KSV    M++VFEALDTLG TKWRVNK+VL V+E++W  GGN+AGLVD
Sbjct: 467  RTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVD 526

Query: 1515 REDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYY 1336
            R D+LIPE+P S+D  E+QKWKWSV KAKK N+ERH+QRCD ELKLSVAR+MKDEEGFYY
Sbjct: 527  RNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYY 586

Query: 1335 PHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKL 1156
            PHNLDFRGRAYPMH HLNHLSSD+CRGVLEFAEGRPLGK+GLRWLKIHLANL++GGV+KL
Sbjct: 587  PHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKL 646

Query: 1155 PYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVIS 976
             ++ R+ FV+NHL +I DSA+ PI+G RWWL+AEDPFQCLAAC+NL+++L+SSSP++VIS
Sbjct: 647  SHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLAEALKSSSPHSVIS 706

Query: 975  HLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDP 796
            HLPIHQDGSCNGLQHYAALGR++LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KD 
Sbjct: 707  HLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDH 766

Query: 795  ATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSA 616
            + H  A LA +LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR LF+A
Sbjct: 767  SKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAA 826

Query: 615  SCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERH 436
            +CYAAKVT+TALGE+F+AARSIMGWLGDCAKVIASEN+PVRWTTPLGLPVVQPY K ERH
Sbjct: 827  ACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERH 886

Query: 435  LIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 256
            LIRTSLQVLALQREG+ V+++KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS
Sbjct: 887  LIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 946

Query: 255  FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHE 76
            FWTHACDVD+MN ILR+KFVELY+MP+LENLLESFQTS+PTLSFP LP RG+FDLE V E
Sbjct: 947  FWTHACDVDEMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPSLPERGNFDLEEVLE 1006

Query: 75   SPYFFN 58
            SPYFFN
Sbjct: 1007 SPYFFN 1012


>gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score = 1321 bits (3418), Expect = 0.0
 Identities = 636/843 (75%), Positives = 744/843 (88%), Gaps = 2/843 (0%)
 Frame = -1

Query: 2586 KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 2407
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+L+REM EKKLAPNLPYVK LFLGWFE LR+A
Sbjct: 130  EKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREA 189

Query: 2406 IAKDQILQESKKQK--AAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAVH 2233
            IAK+Q +Q+ K +K  AAYA  I LLPADK+AVIVMHKMMGL+M   EDG V+VVQAAVH
Sbjct: 190  IAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVMGAEEDGYVQVVQAAVH 249

Query: 2232 IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 2053
            IG A+EQEVRIH+FLE +KNY+R  +  +D+ +   KE+ ILRKRVN+LI+++++ E Q+
Sbjct: 250  IGVAIEQEVRIHSFLEKTKNYQR--KQIVDEVQGASKEKEILRKRVNSLIRRRRLTEVQK 307

Query: 2052 LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 1873
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSP D+RPAFRH  KTI +G
Sbjct: 308  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLDVRPAFRHKFKTISRG 367

Query: 1872 SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 1693
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 368  PGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 427

Query: 1692 THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1513
            THG+R+QQEA+K V  K M++VFEALDTLG TKWRVN +VL V+E++WA GGN+AGLVDR
Sbjct: 428  THGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVESIWASGGNIAGLVDR 487

Query: 1512 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1333
             D+ IPE+P+S+D+ EIQ+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 488  NDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLSVARKMENEEGFYYP 547

Query: 1332 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1153
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANLY+GGV+KL 
Sbjct: 548  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLYSGGVEKLS 607

Query: 1152 YEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 973
            ++ R+ FVDNHLD+I DSA+ PI+G RWWL+AEDPFQCLAACMNLS++L+S+SP+++IS+
Sbjct: 608  HDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLSEALKSTSPHSMISY 667

Query: 972  LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 793
            LPIHQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDPA
Sbjct: 668  LPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSNKDPA 727

Query: 792  THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 613
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDRLLFSA+
Sbjct: 728  TNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRLLFSAA 787

Query: 612  CYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHL 433
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAKVIASEN+PVRWTTPLGLPVVQPY K ERHL
Sbjct: 788  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYYKSERHL 847

Query: 432  IRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 253
            IRT+LQVLALQREG+SV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL+FAGVHDSF
Sbjct: 848  IRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLYFAGVHDSF 907

Query: 252  WTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHES 73
            WTHACDV+KMN ILREKFVELY MP+LENLLESF+TS+PTL FPPLP RG+FDL+ V   
Sbjct: 908  WTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPPLPERGNFDLQTVLAC 967

Query: 72   PYF 64
             +F
Sbjct: 968  TFF 970


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
            gi|462398756|gb|EMJ04424.1| hypothetical protein
            PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score = 1318 bits (3412), Expect = 0.0
 Identities = 631/848 (74%), Positives = 737/848 (86%)
 Frame = -1

Query: 2601 DDRVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFE 2422
            + +  +++ Y+ LRRRQIK ETEAWE+M  EY+DL++ M EKKLAPNLPYVK+LFLGWFE
Sbjct: 130  ESKEIERRNYNVLRRRQIKAETEAWERMVDEYKDLEKVMREKKLAPNLPYVKALFLGWFE 189

Query: 2421 SLRDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQA 2242
             LR+AIA++Q  Q++KK KAA+A  I LLPADKMA+IVMHKMMGL+M G++DGCV+VVQA
Sbjct: 190  PLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVGNQDGCVQVVQA 249

Query: 2241 AVHIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIE 2062
            AVHIG A+EQEVRIH+FLE +KN ++ +    D+D  L KE+ ILRKRVN LI+++++ E
Sbjct: 250  AVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADED-GLSKEKEILRKRVNGLIRRKRLNE 308

Query: 2061 AQRLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTI 1882
             Q+L+  EE   WGRD QAKLGSRL+ELLTETA+V PP++QLADSPPD+RPAFRH  K +
Sbjct: 309  VQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLADSPPDVRPAFRHRFKAV 368

Query: 1881 RKGSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSY 1702
             K  G    K YGVIECD LV  GLD T +HM + Y+PML+PPK+WKGY  GGHLFLPSY
Sbjct: 369  AKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSY 428

Query: 1701 VMRTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGL 1522
            VMRTHG+R+Q +A++++ R QMQ+VFEALD LG TKWRVNK+VL V+E++WARGGN+AGL
Sbjct: 429  VMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVESIWARGGNIAGL 488

Query: 1521 VDREDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGF 1342
            V+RED+ +P++  S+D  EIQ+WKWSV KAKK N+ERH+QRCD ELKLSVARKMKDEEGF
Sbjct: 489  VNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKLSVARKMKDEEGF 548

Query: 1341 YYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVD 1162
            YYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLGK+GLRWLKIHLANLYAGGV+
Sbjct: 549  YYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVE 608

Query: 1161 KLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTV 982
            KL YE R+ FVDNH+DDI DSA  P++G RWWL+AEDP QCLAAC+NLS++L S SP+TV
Sbjct: 609  KLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTV 668

Query: 981  ISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSK 802
            ISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNL+ G++PADVYSEIAARVH+IMKRD +K
Sbjct: 669  ISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNK 728

Query: 801  DPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLF 622
            DP T   A LA +L++Q+DRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G ITDDRLLF
Sbjct: 729  DPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLF 788

Query: 621  SASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPE 442
            +A+CYAAKVT+ ALGE+FQAAR IM WLGDCAKVIASEN+PVRWTTPLGLPVVQPY K E
Sbjct: 789  TAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSE 848

Query: 441  RHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVH 262
            RHLIRTSLQVLALQRE +SVD++KQ++AFPPNFVHSLDGSHMMMTA+ACRDAGL FAGVH
Sbjct: 849  RHLIRTSLQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVH 908

Query: 261  DSFWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENV 82
            DSFWTH CDVD+MN ILREKFVELY MPILE+LLESFQ S+P L+FPPLP RGDFDL  V
Sbjct: 909  DSFWTHPCDVDQMNEILREKFVELYSMPILESLLESFQASYPALTFPPLPERGDFDLLQV 968

Query: 81   HESPYFFN 58
             ESPYFFN
Sbjct: 969  LESPYFFN 976


>ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Prunus mume]
          Length = 976

 Score = 1314 bits (3401), Expect = 0.0
 Identities = 629/848 (74%), Positives = 736/848 (86%)
 Frame = -1

Query: 2601 DDRVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFE 2422
            + +  +++ Y+ LRRRQIK ETEAWE+M  EY+DL++ M EKKLAPNLPYVK+LFLGWFE
Sbjct: 130  ESKEIERRNYNLLRRRQIKAETEAWERMVDEYKDLEKVMREKKLAPNLPYVKALFLGWFE 189

Query: 2421 SLRDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQA 2242
             LR+AIA++Q  Q++KK KAA+A  I LLPADKMA+IVMHKMMGL+M G++DGCV+VVQA
Sbjct: 190  PLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVGNQDGCVQVVQA 249

Query: 2241 AVHIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIE 2062
            AVHIG A+EQEVRIH+FLE +KN ++ +    D+D  L KE+ ILRKRVN LI+++++ E
Sbjct: 250  AVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADED-GLSKEKEILRKRVNGLIRRKRLNE 308

Query: 2061 AQRLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTI 1882
             Q+L+  EE   WGRD QAKLGSRL+ELLTETA+V PP++QLA+SPPD+RPAFRH  K +
Sbjct: 309  VQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLAESPPDVRPAFRHRFKAV 368

Query: 1881 RKGSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSY 1702
             K  G    K YGVIECD LV  GLD T +HM + Y+PML+PPK+WKGY  GGHLFLPSY
Sbjct: 369  AKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSY 428

Query: 1701 VMRTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGL 1522
            VMRTHG+R+Q +A++++ R QMQ+VFEALD LG TKWRVNK+VL V+E++WARGGN+AGL
Sbjct: 429  VMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVESIWARGGNIAGL 488

Query: 1521 VDREDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGF 1342
            V+RED+ +P++  S+D  EIQ+WKWSV KAKK N+ERH+ RCD ELKLSVARKMKDEEGF
Sbjct: 489  VNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSLRCDTELKLSVARKMKDEEGF 548

Query: 1341 YYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVD 1162
            YYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLGK+GLRWLKIHLANLYAGGV+
Sbjct: 549  YYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVE 608

Query: 1161 KLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTV 982
            KL YE R+ FVDNH+DDI DSA  P++G RWWL+AEDP QCLAAC+NLS++L S SP+TV
Sbjct: 609  KLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTV 668

Query: 981  ISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSK 802
            ISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNL+ G++PADVYSEIAARVH+IMKRD +K
Sbjct: 669  ISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNK 728

Query: 801  DPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLF 622
            DP T   A LA +L++Q+DRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G ITDDRLLF
Sbjct: 729  DPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLF 788

Query: 621  SASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPE 442
            +A+CYAAKVT+ ALGE+FQAAR IM WLGDCAKVIASEN+PVRWTTPLGLPVVQPY K E
Sbjct: 789  TAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSE 848

Query: 441  RHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVH 262
            RHLIRTSLQVLALQRE +SVD++KQ++AFPPNFVHSLDGSHMMMTA+ACRDAGL FAGVH
Sbjct: 849  RHLIRTSLQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVH 908

Query: 261  DSFWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENV 82
            DSFWTH CDVD+MN ILREKFVELY MPILE+LLESFQ S+P L+FPPLP RGDFDL  V
Sbjct: 909  DSFWTHPCDVDQMNEILREKFVELYSMPILESLLESFQASYPALTFPPLPERGDFDLLQV 968

Query: 81   HESPYFFN 58
             ESPYFFN
Sbjct: 969  LESPYFFN 976


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Fragaria
            vesca subsp. vesca]
          Length = 973

 Score = 1312 bits (3395), Expect = 0.0
 Identities = 623/842 (73%), Positives = 734/842 (87%)
 Frame = -1

Query: 2583 KKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDAI 2404
            ++KY+ LRRRQIK ETEAWEKM ++Y+DL+R M EKKLAP+LPYVK+LFLGWFE LR+AI
Sbjct: 133  RRKYNLLRRRQIKAETEAWEKMVEDYKDLERVMREKKLAPSLPYVKALFLGWFEPLREAI 192

Query: 2403 AKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAVHIGE 2224
            AK+Q  Q++KK K A+A  I LLPADKMA+IVMHK+MGL+M G++DGCV+VVQAAVHIG 
Sbjct: 193  AKEQKAQQTKKHKQAFAPHIDLLPADKMALIVMHKLMGLVMMGNQDGCVQVVQAAVHIGM 252

Query: 2223 AVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRLVT 2044
            A+EQEVRIH+FLE SK+ +R + +  D+D  L KE+ ILRKRVN LI++++++E Q+L+ 
Sbjct: 253  AIEQEVRIHSFLEKSKSLQRKKTSVADED-GLSKEKEILRKRVNGLIRRKRLVEVQKLLK 311

Query: 2043 NEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGSGP 1864
             E+   WGRD QAKLGSRL+ELLTETA V PP++QLAD PPD+RPAFRH LK   K  G 
Sbjct: 312  KEDMKPWGRDTQAKLGSRLIELLTETAHVQPPLDQLADGPPDVRPAFRHRLKAAAKSPGQ 371

Query: 1863 GCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRTHG 1684
               K YGVIECD LV  GLD T +HM + Y+PML+PPK+WKGY  GGHLFLPSYVMRTHG
Sbjct: 372  KLVKNYGVIECDPLVLAGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSYVMRTHG 431

Query: 1683 ARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDREDL 1504
            +R+Q + ++++  +QMQ+VFEALD LG TKWR+NK+VL V+E++WARGGN+AGLVDRED+
Sbjct: 432  SRKQVDTMRNISGRQMQKVFEALDMLGSTKWRINKKVLNVVESIWARGGNIAGLVDREDV 491

Query: 1503 LIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHNL 1324
             +PE+P S+D  EIQ+W+WS  KAKK N+ERH+QRCD ELKLSVAR+MKDE+GFYYPHNL
Sbjct: 492  PVPEKPPSEDPTEIQEWRWSARKAKKLNQERHSQRCDTELKLSVARRMKDEDGFYYPHNL 551

Query: 1323 DFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPYEE 1144
            DFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLGK+GLRWLKIHLANLY+GGV+KL Y+ 
Sbjct: 552  DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYSGGVEKLSYDG 611

Query: 1143 RVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHLPI 964
            R+ FVDNH+DDI DSA  P++G RWWL+AEDP QCLAAC+NLS++L S SP+TVISHLPI
Sbjct: 612  RISFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPI 671

Query: 963  HQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPATHS 784
            HQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PADVYSEIA RVHDIMKRD +KDP T+ 
Sbjct: 672  HQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAVRVHDIMKRDSNKDPTTNP 731

Query: 783  AARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASCYA 604
             A LA +L++Q+DRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G ITDDRLLF+A+CYA
Sbjct: 732  NALLAKVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYA 791

Query: 603  AKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHLIRT 424
            AKVT+ ALGE+FQAAR IM WLGDCAKVIASEN+PVRWTTPLGLPVVQPY K ERHLIRT
Sbjct: 792  AKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRT 851

Query: 423  SLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTH 244
            SLQVLALQRE + VDV+KQ++AFPPNFVHSLDGSHMMMTA+ACRDAG+ FAGVHDSFWTH
Sbjct: 852  SLQVLALQRESNLVDVRKQRTAFPPNFVHSLDGSHMMMTALACRDAGIRFAGVHDSFWTH 911

Query: 243  ACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHESPYF 64
            ACDVD+MN ILRE FVELY  PILENLLESFQ ++P L+FPPLP RGDFDL+ V +SPYF
Sbjct: 912  ACDVDQMNQILRENFVELYSKPILENLLESFQAAYPELTFPPLPERGDFDLQEVLKSPYF 971

Query: 63   FN 58
            FN
Sbjct: 972  FN 973


>ref|XP_011033373.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Populus
            euphratica]
          Length = 982

 Score = 1309 bits (3387), Expect = 0.0
 Identities = 629/843 (74%), Positives = 737/843 (87%)
 Frame = -1

Query: 2586 KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 2407
            +K+KY+ LRRRQI+ ETEAWE+MA+EY  L +EM E+KLAPNLPYVKSLFLGWFE L++A
Sbjct: 141  EKRKYNLLRRRQIREETEAWERMAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEA 200

Query: 2406 IAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAVHIG 2227
            I ++Q L++SKKQK+A++  I LLPADKMAVIVMHKMMGL+M GHEDGCVRVVQAAV IG
Sbjct: 201  IEREQKLEKSKKQKSAFSPYIELLPADKMAVIVMHKMMGLVMVGHEDGCVRVVQAAVQIG 260

Query: 2226 EAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRLV 2047
             A+EQEVRIH FLE +KN++R ++   D  E++ KE+ +LRKRVN+LI++++++E Q LV
Sbjct: 261  IAIEQEVRIHNFLEKTKNHQR-KKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLV 319

Query: 2046 TNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGSG 1867
              +E+  W RD QAKLGSRL+ELLTETA+V PP +Q    PPD+RPAFRH  K++ K  G
Sbjct: 320  IQDETKPWSRDKQAKLGSRLIELLTETAYVQPPADQSEGIPPDVRPAFRHIFKSVTKNPG 379

Query: 1866 PGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRTH 1687
                K+YGVIECD L+  GLDGT +HM + Y PML+PPKKW+GY  GGHLFLPSY+MRTH
Sbjct: 380  QKTVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWRGYDKGGHLFLPSYIMRTH 439

Query: 1686 GARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDRED 1507
            G+RQQQ+AV+SVP KQMQ+VFEALDTLG TKWRVN +VL+V+E +WA GGN AGLV+R D
Sbjct: 440  GSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVVERIWASGGNNAGLVNRGD 499

Query: 1506 LLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHN 1327
            + IPE+P SDD  EIQKWKWSV KAKK N+ERH+QRCD ELKLSVARK+KDEEGFYYPHN
Sbjct: 500  IPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHN 559

Query: 1326 LDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPYE 1147
            LDFRGRAYPMH HL HLSSDLCRGVLEFAEGRPLGK+GL WLKIHLANLY+GGV+KL ++
Sbjct: 560  LDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHD 619

Query: 1146 ERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHLP 967
             R+ FV+NHL +I DSA+ P++GKRWWL+AEDPFQCLAAC+NLS++L+S+SP+TVISHLP
Sbjct: 620  GRLAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSTSPHTVISHLP 679

Query: 966  IHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPATH 787
            IHQDGSCNGLQHYAALG DS EAAAVNL+A E+P+DVYSEIAARVH+I+++D +KDPAT+
Sbjct: 680  IHQDGSCNGLQHYAALGGDSQEAAAVNLVAAEKPSDVYSEIAARVHEIIRKDSNKDPATN 739

Query: 786  SAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASCY 607
              A LA +LID+VDRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G+ITDDRLLFSA+CY
Sbjct: 740  PHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACY 799

Query: 606  AAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHLIR 427
            AAKVT+TALGE+FQAAR IMGWLGDCAKVIASE++PVRWTTPLGLPVVQPY K +RHLIR
Sbjct: 800  AAKVTLTALGELFQAARDIMGWLGDCAKVIASEDQPVRWTTPLGLPVVQPYYKTQRHLIR 859

Query: 426  TSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWT 247
            TSLQVLALQREG SV V+KQ++AFPPNFVHSLDGSHMMMTAVACRDA L FAGVHDSFWT
Sbjct: 860  TSLQVLALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDADLRFAGVHDSFWT 919

Query: 246  HACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHESPY 67
            HA DVD MN ILREKFVELY+MPILENLLE FQTS+PTL FP LP RG+FDL+ V  SPY
Sbjct: 920  HARDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFPSLPERGNFDLQEVLRSPY 979

Query: 66   FFN 58
            FFN
Sbjct: 980  FFN 982


>ref|XP_011069583.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
            [Sesamum indicum]
          Length = 952

 Score = 1307 bits (3382), Expect = 0.0
 Identities = 639/844 (75%), Positives = 730/844 (86%), Gaps = 1/844 (0%)
 Frame = -1

Query: 2586 KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 2407
            +++KY  LRRRQIK ETEAWE M +EYR+L+REM EKKLAPNLPYVK L LGWFE LR+A
Sbjct: 111  ERRKYYLLRRRQIKAETEAWENMVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREA 170

Query: 2406 IAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTG-HEDGCVRVVQAAVHI 2230
            I K+Q  Q SKKQKAA+A  I  LPADKMAVIVMHK+M LLM G  ED CVRVV+AAV I
Sbjct: 171  IEKEQNSQRSKKQKAAFAPFIDALPADKMAVIVMHKIMSLLMMGGKEDRCVRVVEAAVQI 230

Query: 2229 GEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRL 2050
            G A+E EVRIH FLE +K Y+R +    + +E   KE AILRKRV +LI++ +VIE Q+L
Sbjct: 231  GVAIEHEVRIHNFLEKTKKYQR-KETVAETEEDSKKEAAILRKRVKSLIRRNRVIEVQKL 289

Query: 2049 VTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGS 1870
            V NEES SW RD QAKLG  L+ELLT++A+V PP+NQ ADSPPD+RPAFRH  K   + S
Sbjct: 290  VRNEESKSWSRDTQAKLGCCLIELLTQSAYVQPPVNQSADSPPDVRPAFRHFFKIAPRES 349

Query: 1869 GPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRT 1690
            G    K+YGVIECD LV  GLD TV+HM + Y+PML+PPKKWKGY  GG+LFLPSY+MRT
Sbjct: 350  GQNVVKKYGVIECDPLVLTGLDKTVKHMIIPYVPMLVPPKKWKGYDKGGYLFLPSYLMRT 409

Query: 1689 HGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDRE 1510
            HG+R+QQ+AVK+VP KQMQ+V+EALDTLG TKWRVNKR+L V+E +WA GGN+AGLV+RE
Sbjct: 410  HGSRKQQKAVKTVPPKQMQKVYEALDTLGNTKWRVNKRILSVVECIWAAGGNIAGLVNRE 469

Query: 1509 DLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPH 1330
            D+ IPE   SDDA E++KWKWSV K KK N+ERH+QRCD ELKL+VARKMKDEEGFYYPH
Sbjct: 470  DVPIPELL-SDDAKEVKKWKWSVRKVKKINQERHSQRCDTELKLNVARKMKDEEGFYYPH 528

Query: 1329 NLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPY 1150
            NLDFRGRAYPMH HLNHLSSDLCRG+LEFAEGRPLGK+GLRWLKIHLANLY GGV+KL Y
Sbjct: 529  NLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSY 588

Query: 1149 EERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHL 970
            + R+ FV+N++ +I DSA   ++G RWWL AEDPFQCLAAC+NL+++L+SSSP+TVISHL
Sbjct: 589  DGRLSFVENNIAEIFDSADNSLNGNRWWLKAEDPFQCLAACINLAEALKSSSPHTVISHL 648

Query: 969  PIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPAT 790
            PIHQDGSCNGLQHYAALGRDS EAAAVNLIAG++PADVYSEIA RVH+IMKRD  KDPAT
Sbjct: 649  PIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPAT 708

Query: 789  HSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASC 610
              +A LA LLI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G ITDDRLLFSA+C
Sbjct: 709  DPSALLAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAAC 768

Query: 609  YAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHLI 430
            YAAKVT+ ALGE+FQAAR+IMGWLGDCAK+IASEN+PV WTTPLGLPVVQPY K +RH+I
Sbjct: 769  YAAKVTLAALGELFQAARAIMGWLGDCAKIIASENQPVCWTTPLGLPVVQPYFKTQRHVI 828

Query: 429  RTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFW 250
            RTSLQVLALQREGDSV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL FAGVHDSFW
Sbjct: 829  RTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGVHDSFW 888

Query: 249  THACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHESP 70
            THACDVD+MN ILREKFV+LY MPILENLLESFQTS+P L+FPPLPNRGDFDLE V ESP
Sbjct: 889  THACDVDRMNQILREKFVDLYSMPILENLLESFQTSYPMLTFPPLPNRGDFDLEKVIESP 948

Query: 69   YFFN 58
            YFFN
Sbjct: 949  YFFN 952


>ref|XP_010904633.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X1
            [Elaeis guineensis]
          Length = 894

 Score = 1306 bits (3381), Expect = 0.0
 Identities = 639/863 (74%), Positives = 738/863 (85%), Gaps = 8/863 (0%)
 Frame = -1

Query: 2622 LSSDGDGDDRVA-------KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAP 2464
            LS++ D   ++A       ++K Y++LRRRQIK ETEAWE+ A EY++L+R MLEKKLAP
Sbjct: 34   LSTEFDAPAKIATSDSCREERKTYNALRRRQIKAETEAWERAAAEYKELERVMLEKKLAP 93

Query: 2463 NLPYVKSLFLGWFESLRDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLL 2284
             LPYVKSLFLGWFE LRDAI K+Q+LQ++K+QKAAYA  IGLLPADKMAVIVMHKMMGLL
Sbjct: 94   CLPYVKSLFLGWFEPLRDAIEKEQMLQKTKRQKAAYALHIGLLPADKMAVIVMHKMMGLL 153

Query: 2283 MTGHEDGCVRVVQAAVHIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILR 2104
            MTG E+GCVRVVQAA+HIGEA+E E +IHT+LE +K   R R+N+ +KD  L + Q  LR
Sbjct: 154  MTGQEEGCVRVVQAAIHIGEAIEHEFKIHTYLEKTKRPGR-RKNQEEKDVILNQGQGNLR 212

Query: 2103 KRVNTLIKKQKVIEAQRLVTNE-ESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADS 1927
            K+V  LIK +K+IE Q+LV NE E  SWGRDAQAKLGSRL+ELL E+AFV  P  QL DS
Sbjct: 213  KKVTKLIKMKKLIEVQKLVKNEIELDSWGRDAQAKLGSRLIELLIESAFVQSPPKQLIDS 272

Query: 1926 PPDIRPAFRHTLKTIRKGSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKK 1747
             PDIRPAFRH+ K + K  G     +YGVIECD LV KGLD T RH+ + Y+PMLIPPK 
Sbjct: 273  LPDIRPAFRHSFKAVAKEDGK-LRNKYGVIECDPLVQKGLDSTARHVVIPYLPMLIPPKN 331

Query: 1746 WKGYQTGGHLFLPSYVMRTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLE 1567
            WKGY  GGHLFLPSYVMRTHGA+ QQ+A+KSVPRKQ+Q+VF+ALD LG TKWRVN+ +L+
Sbjct: 332  WKGYDKGGHLFLPSYVMRTHGAKDQQDAIKSVPRKQLQKVFKALDILGSTKWRVNRPILD 391

Query: 1566 VIEAVWARGGNVAGLVDREDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIE 1387
            V+E +W++GG +AGLVDR D+ +PE   S+D++EI+KW+W V K KK N E HAQRCD E
Sbjct: 392  VVEGIWSKGGGIAGLVDRVDIPVPERSDSEDSVEIRKWRWRVRKVKKANNEMHAQRCDTE 451

Query: 1386 LKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLR 1207
            LKLSVARKM+DEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRG+LEFAEGRPLGK+GLR
Sbjct: 452  LKLSVARKMRDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRPLGKSGLR 511

Query: 1206 WLKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAAC 1027
            WLKIHLANLY GGV KL Y+ R+ FV+NHL DI DSA  PI+G RWWL+AEDPFQCLAAC
Sbjct: 512  WLKIHLANLYGGGVGKLSYDGRLAFVENHLHDIFDSAANPIEGDRWWLNAEDPFQCLAAC 571

Query: 1026 MNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSE 847
            +NLSD+L+SSSP   ISH+PIHQDGSCNGLQHYAALGRDSLEAAAVNL+AGE+P DVYS 
Sbjct: 572  INLSDALKSSSPTEAISHIPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPGDVYSG 631

Query: 846  IAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKR 667
            IAARV DIM++D ++DP T+  A LA  L+DQVDRKLVKQTVMTSVYGVT+VGAREQIKR
Sbjct: 632  IAARVMDIMRKDSARDPTTNPTALLAKALVDQVDRKLVKQTVMTSVYGVTFVGAREQIKR 691

Query: 666  RLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWT 487
            RL E+G ITDDRLLF+ASCYAAKVT+ ALGEMFQAARSIM WL DCAKVIASE++PVRWT
Sbjct: 692  RLEEKGLITDDRLLFTASCYAAKVTLDALGEMFQAARSIMKWLADCAKVIASEDQPVRWT 751

Query: 486  TPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMT 307
            TPLGLPVVQPY+  ERHLIRTSLQVLALQREG SV VK+QKSAFPPNFVHSLDGSHMMMT
Sbjct: 752  TPLGLPVVQPYKNCERHLIRTSLQVLALQREGHSVSVKRQKSAFPPNFVHSLDGSHMMMT 811

Query: 306  AVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLS 127
            A++C++AGLHFAGVHDSFWTHACDVD+MN ILRE+FVELY++PILENLLE FQTSFPTLS
Sbjct: 812  AISCKNAGLHFAGVHDSFWTHACDVDRMNQILREQFVELYNIPILENLLEDFQTSFPTLS 871

Query: 126  FPPLPNRGDFDLENVHESPYFFN 58
            FPPLP+RG+FDL+ V  SPYFFN
Sbjct: 872  FPPLPDRGNFDLKKVLGSPYFFN 894


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
            gi|222854390|gb|EEE91937.1| hypothetical protein
            POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score = 1306 bits (3381), Expect = 0.0
 Identities = 627/843 (74%), Positives = 736/843 (87%)
 Frame = -1

Query: 2586 KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 2407
            +K+KY+ LRRRQI+ ETEAWE+MA+EY  L +EM E+KLAPNLPYVKSLFLGWFE L++A
Sbjct: 141  EKRKYNLLRRRQIREETEAWERMAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEA 200

Query: 2406 IAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKMMGLLMTGHEDGCVRVVQAAVHIG 2227
            I ++Q L++SKKQK+A++  I LLPADKMAVIVMHKMMGL+M GHEDGCVRVVQAAV IG
Sbjct: 201  IEREQKLEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLVMVGHEDGCVRVVQAAVQIG 260

Query: 2226 EAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRLV 2047
             A+EQEVRIH FLE +KN++R ++   D  E++ KE+ +LRKRVN+LI++++++E Q LV
Sbjct: 261  IAIEQEVRIHNFLEKTKNHQR-KKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLV 319

Query: 2046 TNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGSG 1867
              +E+  W RD QAKLGSRL+ELLTETA+V PP++Q    PPD+RPAFRH  K++ K  G
Sbjct: 320  IQDETKPWNRDKQAKLGSRLIELLTETAYVQPPVDQSEGIPPDVRPAFRHIFKSVTKNPG 379

Query: 1866 PGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRTH 1687
                K+YGVIECD L+  GLDGT +HM + Y PML+PPKKW+GY  GGHLFLPSY+MRTH
Sbjct: 380  QKTVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWRGYDKGGHLFLPSYIMRTH 439

Query: 1686 GARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDRED 1507
            G+RQQQ+AV+SVP KQMQ+VFEALDTLG TKWRVN +VL+V+E +WA GGN AGLV+R D
Sbjct: 440  GSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVVERIWASGGNNAGLVNRGD 499

Query: 1506 LLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHN 1327
            + IPE+  SDD  EIQKWKWSV KAKK N+ERH+QRCD ELKLSVARK+KDEEGFYYPHN
Sbjct: 500  IPIPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHN 559

Query: 1326 LDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPYE 1147
            LDFRGRAYPMH HL HLSSDLCRGVLEFAEGRPLGK+GL WLKIHLANLY+GGV+KL ++
Sbjct: 560  LDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHD 619

Query: 1146 ERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHLP 967
             R+ FV+NHL +I DSA+ P++GKRWWL+AEDPFQCLAAC+NLS++L+S+SP+TVISHLP
Sbjct: 620  GRLAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHLP 679

Query: 966  IHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPATH 787
            IHQDGSCNGLQHYAALGRDS EAAAVNL+A E+P+DVYSEIA RVH+I++RD +KDPAT+
Sbjct: 680  IHQDGSCNGLQHYAALGRDSQEAAAVNLVAAEKPSDVYSEIATRVHEIIRRDSNKDPATN 739

Query: 786  SAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASCY 607
              A LA +LID+VDRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G+ITDDR+LFSA+CY
Sbjct: 740  PHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRVLFSAACY 799

Query: 606  AAKVTMTALGEMFQAARSIMGWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKPERHLIR 427
            AAKVT+TALGE+FQAAR IMGWLGDCAKVIASE++PVRWTTPLGLPVVQPY K +RHLIR
Sbjct: 800  AAKVTLTALGELFQAARDIMGWLGDCAKVIASEDQPVRWTTPLGLPVVQPYYKTQRHLIR 859

Query: 426  TSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWT 247
            TSLQVLALQREG SV V+KQ++AFPPNFVHSLDGSHMMMTAVACRDA L FAGVHDSFWT
Sbjct: 860  TSLQVLALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDADLRFAGVHDSFWT 919

Query: 246  HACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPNRGDFDLENVHESPY 67
            HA D D MN ILREKFVELY+MPILENLLE FQTS+PTL FP LP RG+FDL+ V  SPY
Sbjct: 920  HARDADLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFPSLPERGNFDLQEVLRSPY 979

Query: 66   FFN 58
            FFN
Sbjct: 980  FFN 982