BLASTX nr result

ID: Papaver31_contig00030853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00030853
         (571 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010247165.1| PREDICTED: transcription factor LHW-like iso...    58   4e-06
ref|XP_010247158.1| PREDICTED: transcription factor LHW-like iso...    58   4e-06
ref|XP_010247149.1| PREDICTED: transcription factor LHW-like iso...    58   4e-06

>ref|XP_010247165.1| PREDICTED: transcription factor LHW-like isoform X3 [Nelumbo
           nucifera]
          Length = 900

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
 Frame = -3

Query: 545 QGSRFGSQPSRSIPVHVESNPQLQPNSSQLAHTTNTQRDSS-----QIKNHPVVRQNNHL 381
           + S+  S PS S+    + N Q     SQ+  T  +    S     Q    P    +  L
Sbjct: 173 RASKIVSHPSHSLSTQAQDNMQANALPSQIPLTMISPVAKSFNVLVQSNIFPSSNADLIL 232

Query: 380 KKETETREIGAQVILSSTKESLNKQLTPNNSSTRPSHQFT--EXXXXXSNLTFIPRQQIL 207
           + + ETR +G+QVILSS+  +LN+Q +   + + P H+ T  +     + LTF+  QQIL
Sbjct: 233 RSQLETRALGSQVILSSSDGTLNQQASAYYTRSGPHHKPTGGQSGVTDNGLTFL-EQQIL 291

Query: 206 SGVVLREPVXXXXXXXXXXXXXXXXXNKGSI-HNSLEDSFPKSLFGESKSLDAGSDIPTL 30
           S   L EPV                   G +  +SL+DS   SL G  +  +AG  + TL
Sbjct: 292 SNSGLLEPV--NNRSSVSSNISSQIRINGDLPPDSLKDSVVTSLLGGRELPNAGCGLQTL 349

Query: 29  SSTP 18
           +S P
Sbjct: 350 TSVP 353


>ref|XP_010247158.1| PREDICTED: transcription factor LHW-like isoform X2 [Nelumbo
           nucifera]
          Length = 930

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
 Frame = -3

Query: 545 QGSRFGSQPSRSIPVHVESNPQLQPNSSQLAHTTNTQRDSS-----QIKNHPVVRQNNHL 381
           + S+  S PS S+    + N Q     SQ+  T  +    S     Q    P    +  L
Sbjct: 245 RASKIVSHPSHSLSTQAQDNMQANALPSQIPLTMISPVAKSFNVLVQSNIFPSSNADLIL 304

Query: 380 KKETETREIGAQVILSSTKESLNKQLTPNNSSTRPSHQFT--EXXXXXSNLTFIPRQQIL 207
           + + ETR +G+QVILSS+  +LN+Q +   + + P H+ T  +     + LTF+  QQIL
Sbjct: 305 RSQLETRALGSQVILSSSDGTLNQQASAYYTRSGPHHKPTGGQSGVTDNGLTFL-EQQIL 363

Query: 206 SGVVLREPVXXXXXXXXXXXXXXXXXNKGSI-HNSLEDSFPKSLFGESKSLDAGSDIPTL 30
           S   L EPV                   G +  +SL+DS   SL G  +  +AG  + TL
Sbjct: 364 SNSGLLEPV--NNRSSVSSNISSQIRINGDLPPDSLKDSVVTSLLGGRELPNAGCGLQTL 421

Query: 29  SSTP 18
           +S P
Sbjct: 422 TSVP 425


>ref|XP_010247149.1| PREDICTED: transcription factor LHW-like isoform X1 [Nelumbo
           nucifera]
          Length = 972

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
 Frame = -3

Query: 545 QGSRFGSQPSRSIPVHVESNPQLQPNSSQLAHTTNTQRDSS-----QIKNHPVVRQNNHL 381
           + S+  S PS S+    + N Q     SQ+  T  +    S     Q    P    +  L
Sbjct: 245 RASKIVSHPSHSLSTQAQDNMQANALPSQIPLTMISPVAKSFNVLVQSNIFPSSNADLIL 304

Query: 380 KKETETREIGAQVILSSTKESLNKQLTPNNSSTRPSHQFT--EXXXXXSNLTFIPRQQIL 207
           + + ETR +G+QVILSS+  +LN+Q +   + + P H+ T  +     + LTF+  QQIL
Sbjct: 305 RSQLETRALGSQVILSSSDGTLNQQASAYYTRSGPHHKPTGGQSGVTDNGLTFL-EQQIL 363

Query: 206 SGVVLREPVXXXXXXXXXXXXXXXXXNKGSI-HNSLEDSFPKSLFGESKSLDAGSDIPTL 30
           S   L EPV                   G +  +SL+DS   SL G  +  +AG  + TL
Sbjct: 364 SNSGLLEPV--NNRSSVSSNISSQIRINGDLPPDSLKDSVVTSLLGGRELPNAGCGLQTL 421

Query: 29  SSTP 18
           +S P
Sbjct: 422 TSVP 425


Top