BLASTX nr result
ID: Papaver31_contig00030741
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00030741
(476 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KMZ69245.1| DNA-directed RNA polymerase [Zostera marina] 96 2e-51
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 95 3e-51
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su... 96 4e-51
ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su... 96 4e-51
ref|NP_001292746.1| DNA-directed RNA polymerase II subunit 1 [Ze... 96 4e-51
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 94 4e-51
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 95 4e-51
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 95 4e-51
gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japo... 96 4e-51
gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indi... 96 4e-51
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 94 5e-51
ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S... 94 8e-51
ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II su... 94 1e-50
gb|EMS50869.1| DNA-directed RNA polymerase II subunit RPB1 [Trit... 96 2e-50
ref|XP_003573479.1| PREDICTED: DNA-directed RNA polymerase II su... 96 2e-50
gb|EMT20712.1| DNA-directed RNA polymerase II subunit RPB1 [Aegi... 96 2e-50
dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare] 96 2e-50
ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II su... 93 2e-50
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 95 2e-50
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su... 91 3e-50
>gb|KMZ69245.1| DNA-directed RNA polymerase [Zostera marina]
Length = 1841
Score = 95.5 bits (236), Expect(3) = 2e-51
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEA+DKLQERLKVVP DD MSMEA KNAT+FFNILL STFASKR+ K
Sbjct: 999 SDMHPMEIVEAVDKLQERLKVVPGDDLMSMEAQKNATLFFNILLRSTFASKRVLK 1053
Score = 87.0 bits (214), Expect(3) = 2e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1086 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1142
Score = 68.2 bits (165), Expect(3) = 2e-51
Identities = 31/36 (86%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LTREAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1057 LTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1092
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 94.7 bits (234), Expect(3) = 3e-51
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD +SMEA KNAT+FFNILL STFASKR+ K
Sbjct: 999 SDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLK 1053
Score = 87.0 bits (214), Expect(3) = 3e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1086 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1142
Score = 68.2 bits (165), Expect(3) = 3e-51
Identities = 31/36 (86%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LTREAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1057 LTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1092
>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
brachyantha]
Length = 1855
Score = 95.5 bits (236), Expect(3) = 4e-51
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD+MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 998 SDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1052
Score = 87.0 bits (214), Expect(3) = 4e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1085 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1141
Score = 67.0 bits (162), Expect(3) = 4e-51
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LT+EAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1056 LTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1091
>ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Setaria italica]
gi|944236418|gb|KQL00756.1| hypothetical protein
SETIT_013115mg [Setaria italica]
Length = 1852
Score = 95.5 bits (236), Expect(3) = 4e-51
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD+MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 998 SDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1052
Score = 87.0 bits (214), Expect(3) = 4e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1085 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1141
Score = 67.0 bits (162), Expect(3) = 4e-51
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LT+EAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1056 LTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1091
>ref|NP_001292746.1| DNA-directed RNA polymerase II subunit 1 [Zea mays]
gi|413917378|gb|AFW57310.1| RNA polymerase II large
subunit family protein [Zea mays]
Length = 1850
Score = 95.5 bits (236), Expect(3) = 4e-51
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD+MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 997 SDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1051
Score = 87.0 bits (214), Expect(3) = 4e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1084 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1140
Score = 67.0 bits (162), Expect(3) = 4e-51
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LT+EAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1055 LTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1090
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 94.4 bits (233), Expect(3) = 4e-51
Identities = 46/55 (83%), Positives = 50/55 (90%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEA+DKLQERLKVVP DD +SMEA KNAT+FFNILL STFASKR+ K
Sbjct: 998 SDMHPMEIVEAVDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLK 1052
Score = 87.0 bits (214), Expect(3) = 4e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1085 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1141
Score = 68.2 bits (165), Expect(3) = 4e-51
Identities = 31/36 (86%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LTREAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1056 LTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1091
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 94.7 bits (234), Expect(3) = 4e-51
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD +SMEA KNAT+FFNILL STFASKR+ K
Sbjct: 999 SDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLK 1053
Score = 87.0 bits (214), Expect(3) = 4e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1086 CIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1142
Score = 67.8 bits (164), Expect(3) = 4e-51
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LTREAF+WVIGE+ESR L+SL+APGEMIGC+AAQSI
Sbjct: 1057 LTREAFEWVIGEIESRFLQSLVAPGEMIGCIAAQSI 1092
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 94.7 bits (234), Expect(3) = 4e-51
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD +SMEA KNAT+FFNILL STFASKR+ K
Sbjct: 999 SDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLK 1053
Score = 87.0 bits (214), Expect(3) = 4e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1086 CIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1142
Score = 67.8 bits (164), Expect(3) = 4e-51
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LTREAF+WVIGE+ESR L+SL+APGEMIGC+AAQSI
Sbjct: 1057 LTREAFEWVIGEIESRFLQSLVAPGEMIGCIAAQSI 1092
>gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japonica Group]
Length = 1526
Score = 95.5 bits (236), Expect(3) = 4e-51
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD+MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 669 SDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 723
Score = 87.0 bits (214), Expect(3) = 4e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 756 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 812
Score = 67.0 bits (162), Expect(3) = 4e-51
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LT+EAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 727 LTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 762
>gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indica Group]
Length = 1449
Score = 95.5 bits (236), Expect(3) = 4e-51
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD+MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 968 SDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1022
Score = 87.0 bits (214), Expect(3) = 4e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1055 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1111
Score = 67.0 bits (162), Expect(3) = 4e-51
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LT+EAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1026 LTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1061
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 94.0 bits (232), Expect(3) = 5e-51
Identities = 46/55 (83%), Positives = 50/55 (90%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEA+DKLQERLKVVP DD +SMEA KNAT+FFNILL STFASKR+ K
Sbjct: 998 SDMHPMEIVEAVDKLQERLKVVPGDDLISMEAQKNATLFFNILLRSTFASKRVLK 1052
Score = 87.0 bits (214), Expect(3) = 5e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1085 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1141
Score = 68.2 bits (165), Expect(3) = 5e-51
Identities = 31/36 (86%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LTREAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1056 LTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1091
>ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor]
gi|241940227|gb|EES13372.1| hypothetical protein
SORBIDRAFT_07g003680 [Sorghum bicolor]
Length = 1857
Score = 94.4 bits (233), Expect(3) = 8e-51
Identities = 46/55 (83%), Positives = 50/55 (90%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEA+DKLQERLKVVP DD MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 997 SDMHPMEIVEAVDKLQERLKVVPGDDPMSIEAQKNATLFFNILLRSTFASKRVLK 1051
Score = 87.0 bits (214), Expect(3) = 8e-51
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1084 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1140
Score = 67.0 bits (162), Expect(3) = 8e-51
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LT+EAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1055 LTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1090
>ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Amborella
trichopoda] gi|548833823|gb|ERM96260.1| hypothetical
protein AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 94.0 bits (232), Expect(3) = 1e-50
Identities = 46/55 (83%), Positives = 50/55 (90%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEA+DKLQERLKVVP DD MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 1001 SDMHPMEIVEAVDKLQERLKVVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLK 1055
Score = 84.3 bits (207), Expect(3) = 1e-50
Identities = 44/56 (78%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLK 432
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLK
Sbjct: 1088 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1143
Score = 69.7 bits (169), Expect(3) = 1e-50
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LTREAFDWVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1059 LTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1094
>gb|EMS50869.1| DNA-directed RNA polymerase II subunit RPB1 [Triticum urartu]
Length = 2040
Score = 95.5 bits (236), Expect(3) = 2e-50
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD+MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 998 SDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1052
Score = 85.9 bits (211), Expect(3) = 2e-50
Identities = 45/61 (73%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKPVPS 444
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S++LKP S
Sbjct: 1085 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPEVS 1144
Query: 445 E 447
+
Sbjct: 1145 K 1145
Score = 65.9 bits (159), Expect(3) = 2e-50
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LT+E+F+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1056 LTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1091
>ref|XP_003573479.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Brachypodium
distachyon] gi|944059756|gb|KQJ95346.1| hypothetical
protein BRADI_3g16660 [Brachypodium distachyon]
Length = 1862
Score = 95.5 bits (236), Expect(3) = 2e-50
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD+MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 999 SDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1053
Score = 85.9 bits (211), Expect(3) = 2e-50
Identities = 45/61 (73%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKPVPS 444
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S++LKP S
Sbjct: 1086 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPEVS 1145
Query: 445 E 447
+
Sbjct: 1146 K 1146
Score = 65.9 bits (159), Expect(3) = 2e-50
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LT+E+F+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1057 LTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1092
>gb|EMT20712.1| DNA-directed RNA polymerase II subunit RPB1 [Aegilops tauschii]
Length = 1861
Score = 95.5 bits (236), Expect(3) = 2e-50
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD+MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 998 SDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1052
Score = 85.9 bits (211), Expect(3) = 2e-50
Identities = 45/61 (73%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKPVPS 444
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S++LKP S
Sbjct: 1085 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPEVS 1144
Query: 445 E 447
+
Sbjct: 1145 K 1145
Score = 65.9 bits (159), Expect(3) = 2e-50
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LT+E+F+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1056 LTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1091
>dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1859
Score = 95.5 bits (236), Expect(3) = 2e-50
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD+MS+EA KNAT+FFNILL STFASKR+ K
Sbjct: 998 SDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1052
Score = 85.9 bits (211), Expect(3) = 2e-50
Identities = 45/61 (73%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKPVPS 444
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S++LKP S
Sbjct: 1085 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPEVS 1144
Query: 445 E 447
+
Sbjct: 1145 K 1145
Score = 65.9 bits (159), Expect(3) = 2e-50
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LT+E+F+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1056 LTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1091
>ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Pyrus x
bretschneideri]
Length = 1820
Score = 92.8 bits (229), Expect(3) = 2e-50
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRL 161
SDMHPMEIVEAIDKLQERLKVVP DD +S+EA KNAT+FFNILL STFASKR+
Sbjct: 998 SDMHPMEIVEAIDKLQERLKVVPGDDQLSVEAQKNATLFFNILLRSTFASKRV 1050
Score = 85.9 bits (211), Expect(3) = 2e-50
Identities = 44/57 (77%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAK+IKT +S+YLKP
Sbjct: 1085 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKP 1141
Score = 68.2 bits (165), Expect(3) = 2e-50
Identities = 31/36 (86%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LTREAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1056 LTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1091
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 94.7 bits (234), Expect(3) = 2e-50
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD +SMEA KNAT+FFNILL STFASKR+ K
Sbjct: 999 SDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLK 1053
Score = 84.3 bits (207), Expect(3) = 2e-50
Identities = 44/56 (78%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLK 432
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLK
Sbjct: 1086 CIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1141
Score = 67.8 bits (164), Expect(3) = 2e-50
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LTREAF+WVIGE+ESR L+SL+APGEMIGC+AAQSI
Sbjct: 1057 LTREAFEWVIGEIESRFLQSLVAPGEMIGCIAAQSI 1092
>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 91.3 bits (225), Expect(3) = 3e-50
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = +3
Query: 3 SDMHPMEIVEAIDKLQERLKVVPSDDSMSMEAHKNATMFFNILLHSTFASKRLSK 167
SDMHPMEIVEAIDKLQERLKVVP DD +SMEA KNAT+ FNILL S+FASKR+ K
Sbjct: 999 SDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKNATLLFNILLRSSFASKRVMK 1053
Score = 87.0 bits (214), Expect(3) = 3e-50
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 CSTVYCIGEPATQLTLNTFHYAEVSAKNVTLGVPR*REIINVAKKIKT-IISIYLKP 435
C IGEPATQ+TLNTFHYA VSAKNVTLGVPR REIINVAKKIKT +S+YLKP
Sbjct: 1086 CVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP 1142
Score = 68.2 bits (165), Expect(3) = 3e-50
Identities = 31/36 (86%), Positives = 35/36 (97%)
Frame = +2
Query: 176 LTREAFDWVIGEVESRLLRSLIAPGEMIGCVAAQSI 283
LTREAF+WVIGE+ESR L+SL+APGEMIGCVAAQSI
Sbjct: 1057 LTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1092