BLASTX nr result

ID: Papaver31_contig00029414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00029414
         (744 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010244438.1| PREDICTED: mediator of RNA polymerase II tra...    61   9e-07
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    60   2e-06
ref|XP_010658921.1| PREDICTED: mediator of RNA polymerase II tra...    59   3e-06
emb|CDP19700.1| unnamed protein product [Coffea canephora]             58   6e-06
ref|XP_011012235.1| PREDICTED: mediator of RNA polymerase II tra...    58   8e-06
ref|XP_011012234.1| PREDICTED: mediator of RNA polymerase II tra...    58   8e-06
ref|XP_011012230.1| PREDICTED: mediator of RNA polymerase II tra...    58   8e-06
ref|XP_010245153.1| PREDICTED: mediator of RNA polymerase II tra...    57   1e-05
ref|XP_010245151.1| PREDICTED: mediator of RNA polymerase II tra...    57   1e-05
ref|XP_002298206.1| hypothetical protein POPTR_0001s21200g [Popu...    57   1e-05

>ref|XP_010244438.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like [Nelumbo nucifera]
          Length = 1410

 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 34/64 (53%), Positives = 38/64 (59%)
 Frame = -3

Query: 418  QWSQLQIPQLKHHDSNQKNTLIDQKSMLTSLPKDGTPLQSANVPIYILSSFTPLASSDLP 239
            Q  Q   PQ+  H S Q    IDQKS+LTSLPK GTPLQSAN P  + S   PL  S +P
Sbjct: 995  QLLQASSPQISQHSSPQ----IDQKSLLTSLPKAGTPLQSANSPFVVPSPSPPLVPSPIP 1050

Query: 238  GKPE 227
            G  E
Sbjct: 1051 GDSE 1054


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 34/72 (47%), Positives = 42/72 (58%)
 Frame = -3

Query: 442  AALKLPGDQWSQLQIPQLKHHDSNQKNTLIDQKSMLTSLPKDGTPLQSANVPIYILSSFT 263
            A+  +   Q  Q   PQL  H S Q    IDQ+++L+SL K GTPLQSAN P  + S  T
Sbjct: 958  ASFPISSPQLLQAASPQLTQHSSPQ----IDQQNLLSSLTKTGTPLQSANSPFVVQSPST 1013

Query: 262  PLASSDLPGKPE 227
            PLA S +PG  E
Sbjct: 1014 PLAPSPMPGDSE 1025


>ref|XP_010658921.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            [Vitis vinifera]
          Length = 1333

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 33/64 (51%), Positives = 40/64 (62%)
 Frame = -3

Query: 418  QWSQLQIPQLKHHDSNQKNTLIDQKSMLTSLPKDGTPLQSANVPIYILSSFTPLASSDLP 239
            Q  Q   PQ+  H S Q    IDQ+++LTSL K GTPLQSAN P  + S  TPLA S +P
Sbjct: 916  QLLQTASPQIPQHSSPQ----IDQQNLLTSLTKAGTPLQSANSPFVVPSPSTPLAPSPMP 971

Query: 238  GKPE 227
            G+ E
Sbjct: 972  GESE 975


>emb|CDP19700.1| unnamed protein product [Coffea canephora]
          Length = 1383

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 37/72 (51%), Positives = 45/72 (62%)
 Frame = -3

Query: 409  QLQIPQLKHHDSNQKNTLIDQKSMLTSLPKDGTPLQSANVPIYILSSFTPLASSDLPGKP 230
            Q   PQ+  H S Q    IDQ+SMLTS+ K GTPLQ+AN P  + S  TPLA S +PG+ 
Sbjct: 969  QAASPQVPPHGSPQ----IDQQSMLTSIAKTGTPLQTANSPFVVPSPSTPLAPSPMPGES 1024

Query: 229  EY**NVVLSSLS 194
            E   N  +SSLS
Sbjct: 1025 EK-LNSGISSLS 1035


>ref|XP_011012235.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X3 [Populus euphratica]
          Length = 1283

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 33/72 (45%), Positives = 42/72 (58%)
 Frame = -3

Query: 442  AALKLPGDQWSQLQIPQLKHHDSNQKNTLIDQKSMLTSLPKDGTPLQSANVPIYILSSFT 263
            ++  +   Q  Q   PQL+ H S Q    IDQ+++L SL K GTPLQSAN P  + S  T
Sbjct: 858  SSFPISSPQMLQHASPQLQQHSSPQ----IDQQNLLPSLTKTGTPLQSANSPFVVPSPST 913

Query: 262  PLASSDLPGKPE 227
            PLA S +PG  E
Sbjct: 914  PLAPSPMPGDSE 925


>ref|XP_011012234.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X2 [Populus euphratica]
          Length = 1307

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 33/72 (45%), Positives = 42/72 (58%)
 Frame = -3

Query: 442  AALKLPGDQWSQLQIPQLKHHDSNQKNTLIDQKSMLTSLPKDGTPLQSANVPIYILSSFT 263
            ++  +   Q  Q   PQL+ H S Q    IDQ+++L SL K GTPLQSAN P  + S  T
Sbjct: 883  SSFPISSPQMLQHASPQLQQHSSPQ----IDQQNLLPSLTKTGTPLQSANSPFVVPSPST 938

Query: 262  PLASSDLPGKPE 227
            PLA S +PG  E
Sbjct: 939  PLAPSPMPGDSE 950


>ref|XP_011012230.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X1 [Populus euphratica]
            gi|743935712|ref|XP_011012231.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 15a-like isoform
            X1 [Populus euphratica] gi|743935714|ref|XP_011012233.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 15a-like isoform X1 [Populus euphratica]
          Length = 1308

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 33/72 (45%), Positives = 42/72 (58%)
 Frame = -3

Query: 442  AALKLPGDQWSQLQIPQLKHHDSNQKNTLIDQKSMLTSLPKDGTPLQSANVPIYILSSFT 263
            ++  +   Q  Q   PQL+ H S Q    IDQ+++L SL K GTPLQSAN P  + S  T
Sbjct: 883  SSFPISSPQMLQHASPQLQQHSSPQ----IDQQNLLPSLTKTGTPLQSANSPFVVPSPST 938

Query: 262  PLASSDLPGKPE 227
            PLA S +PG  E
Sbjct: 939  PLAPSPMPGDSE 950


>ref|XP_010245153.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X2 [Nelumbo nucifera]
          Length = 1386

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 33/72 (45%), Positives = 41/72 (56%)
 Frame = -3

Query: 442  AALKLPGDQWSQLQIPQLKHHDSNQKNTLIDQKSMLTSLPKDGTPLQSANVPIYILSSFT 263
            A+  +   Q  Q   PQ+  H S Q    IDQ+S+L+SL K GTPLQSAN P  + S   
Sbjct: 962  ASFPISSPQLLQAASPQISQHSSPQ----IDQQSLLSSLTKAGTPLQSANSPFVVPSPSP 1017

Query: 262  PLASSDLPGKPE 227
            PLA S +PG  E
Sbjct: 1018 PLAPSPIPGDSE 1029


>ref|XP_010245151.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X1 [Nelumbo nucifera]
            gi|720090613|ref|XP_010245152.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 15a isoform X1
            [Nelumbo nucifera]
          Length = 1422

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 33/72 (45%), Positives = 41/72 (56%)
 Frame = -3

Query: 442  AALKLPGDQWSQLQIPQLKHHDSNQKNTLIDQKSMLTSLPKDGTPLQSANVPIYILSSFT 263
            A+  +   Q  Q   PQ+  H S Q    IDQ+S+L+SL K GTPLQSAN P  + S   
Sbjct: 998  ASFPISSPQLLQAASPQISQHSSPQ----IDQQSLLSSLTKAGTPLQSANSPFVVPSPSP 1053

Query: 262  PLASSDLPGKPE 227
            PLA S +PG  E
Sbjct: 1054 PLAPSPIPGDSE 1065


>ref|XP_002298206.1| hypothetical protein POPTR_0001s21200g [Populus trichocarpa]
           gi|222845464|gb|EEE83011.1| hypothetical protein
           POPTR_0001s21200g [Populus trichocarpa]
          Length = 772

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 33/72 (45%), Positives = 42/72 (58%)
 Frame = -3

Query: 442 AALKLPGDQWSQLQIPQLKHHDSNQKNTLIDQKSMLTSLPKDGTPLQSANVPIYILSSFT 263
           ++  +   Q  Q   PQL+ H S Q    IDQ+++L SL K GTPLQSAN P  + S  T
Sbjct: 354 SSFPISSPQMLQHASPQLQQHSSPQ----IDQQNLLPSLTKTGTPLQSANSPFVVPSPST 409

Query: 262 PLASSDLPGKPE 227
           PLA S +PG  E
Sbjct: 410 PLAPSPVPGDSE 421


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