BLASTX nr result

ID: Papaver31_contig00028961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00028961
         (989 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE60208.1| hypothetical protein OsJ_13177 [Oryza sativa Japo...    65   6e-08
gb|AAO18440.1| putative RNA-binding protein [Oryza sativa Japoni...    65   6e-08
gb|EEC76439.1| hypothetical protein OsI_14130 [Oryza sativa Indi...    65   1e-07

>gb|EEE60208.1| hypothetical protein OsJ_13177 [Oryza sativa Japonica Group]
          Length = 878

 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
 Frame = -2

Query: 919 DANRATELKNGAFVGRKKITVKLGKCRAPLEQRLLKKNQV-------------NADDTKK 779
           DA R+ + K+G  V  +KI VKL   RAPL++RL KK                +AD T +
Sbjct: 80  DAERSIQQKDGFSVAGRKIRVKLATHRAPLKERLQKKENAMQAKDADVTNEAKDADSTNE 139

Query: 778 R*PGNR*SSCFSRYYCYQRGTIRKTERLLEMD-----AAAVLYTGVGSARIAVFKLHQQE 614
               +  +          + T  K +  LE D     AAAVL+  V SA  +V  LH++E
Sbjct: 140 AQDADATNEEDDTSTAKHKETSHKKDAGLERDGCTTDAAAVLFASVTSAWDSVVHLHRKE 199

Query: 613 IKGASVWAR*LGGGV*HFLRW 551
           +KGA VWAR LGG      +W
Sbjct: 200 VKGAVVWARQLGGEGSKIRKW 220


>gb|AAO18440.1| putative RNA-binding protein [Oryza sativa Japonica Group]
           gi|108711831|gb|ABF99626.1| RNA recognition motif family
           protein [Oryza sativa Japonica Group]
          Length = 885

 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
 Frame = -2

Query: 919 DANRATELKNGAFVGRKKITVKLGKCRAPLEQRLLKKNQV-------------NADDTKK 779
           DA R+ + K+G  V  +KI VKL   RAPL++RL KK                +AD T +
Sbjct: 80  DAERSIQQKDGFSVAGRKIRVKLATHRAPLKERLQKKENAMQAKDADVTNEAKDADSTNE 139

Query: 778 R*PGNR*SSCFSRYYCYQRGTIRKTERLLEMD-----AAAVLYTGVGSARIAVFKLHQQE 614
               +  +          + T  K +  LE D     AAAVL+  V SA  +V  LH++E
Sbjct: 140 AQDADATNEEDDTSTAKHKETSHKKDAGLERDGCTTDAAAVLFASVTSAWDSVVHLHRKE 199

Query: 613 IKGASVWAR*LGGGV*HFLRW 551
           +KGA VWAR LGG      +W
Sbjct: 200 VKGAVVWARQLGGEGSKIRKW 220


>gb|EEC76439.1| hypothetical protein OsI_14130 [Oryza sativa Indica Group]
          Length = 878

 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
 Frame = -2

Query: 919 DANRATELKNGAFVGRKKITVKLGKCRAPLEQRLLKKNQV-------------NADDTKK 779
           DA R+ + K+G  V  +KI VKL   RAPL++RL KK                +AD T +
Sbjct: 80  DAERSIQQKDGFSVAGRKIRVKLATHRAPLKERLQKKENAMQAKDADVTNEAKDADATNE 139

Query: 778 R*PGNR*SSCFSRYYCYQRGTIRKTERLLEMD-----AAAVLYTGVGSARIAVFKLHQQE 614
               +  +          + T  K +  LE D     AAAVL+  V SA  +V  LH++E
Sbjct: 140 AQDADATNEEDDTSTAKHKETSHKKDAGLERDGCTTDAAAVLFASVTSAWDSVVHLHRKE 199

Query: 613 IKGASVWAR*LGGGV*HFLRW 551
           +KGA VWAR LGG      +W
Sbjct: 200 VKGAVVWARQLGGEGSKIRKW 220


Top