BLASTX nr result

ID: Papaver31_contig00025675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00025675
         (413 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873018.1| glycoside hydrolase starch-binding domain-co...    57   5e-06
ref|NP_974720.1| carbohydrate-binding domain-containing protein ...    57   5e-06
ref|NP_568087.1| carbohydrate-binding domain-containing protein ...    56   9e-06

>ref|XP_002873018.1| glycoside hydrolase starch-binding domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297318855|gb|EFH49277.1| glycoside hydrolase
           starch-binding domain-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 387

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 26/137 (18%)
 Frame = -2

Query: 412 ETDKTIVIYEDWDNVELQMVTEEESIAKSYIS-------QEVVVGDSNKEDSMVNADA-- 260
           ET+KTI I EDWDN +LQM+ EE+ +  + IS        EV+V    K   +V  +A  
Sbjct: 173 ETNKTIRICEDWDNADLQMMIEEDLVPYTNISSNSEEEEDEVLVTTQQKASVVVVENAGY 232

Query: 259 -EEDTVVNSN---TAESTISP---ITTIEKVAYPEAEQNDTEDSVLVPGLAPLSTTTVE- 104
             +++  NS+    +E T+ P     T  +V   EA   + E  VLVPGL PLS    E 
Sbjct: 233 VSDESAENSSFDIQSEKTVEPSNGALTAREVT-KEAMFTEEESPVLVPGLIPLSDLDSED 291

Query: 103 ---------ESFPQVFK 80
                    E+FP+V K
Sbjct: 292 VEVINEGKAETFPEVDK 308


>ref|NP_974720.1| carbohydrate-binding domain-containing protein [Arabidopsis
           thaliana] gi|6759449|emb|CAB69854.1| putative protein
           [Arabidopsis thaliana] gi|332002935|gb|AED90318.1|
           carbohydrate-binding domain-containing protein
           [Arabidopsis thaliana]
          Length = 385

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 27/138 (19%)
 Frame = -2

Query: 412 ETDKTIVIYEDWDNVELQMVTEEESIAKSYIS------QEVVVGDSNKEDSMVNAD---- 263
           ET+KTI I EDWDN +LQM+ EE+ +  + IS      ++ V+G   +  S+V  +    
Sbjct: 171 ETNKTIRICEDWDNADLQMMIEEDFVPYTNISSIGSEDEDEVLGSVQQNSSVVAVENAGY 230

Query: 262 AEEDTVVNSN---TAESTISP----ITTIEKVAYPEAEQNDTEDSVLVPGLAPLSTTTVE 104
             +++  NS+    +E T+ P    +T  E +   EA   + E  VLVPGL PLS    E
Sbjct: 231 VSDESAQNSSFSIQSEKTMEPSNGALTAREVI--KEAMFTEEESPVLVPGLIPLSDLDNE 288

Query: 103 ----------ESFPQVFK 80
                     E+FP+V K
Sbjct: 289 QVEVINEGKAETFPEVDK 306


>ref|NP_568087.1| carbohydrate-binding domain-containing protein [Arabidopsis
           thaliana] gi|16323041|gb|AAL15255.1| AT5g01260/F7J8_240
           [Arabidopsis thaliana] gi|23505873|gb|AAN28796.1|
           At5g01260/F7J8_240 [Arabidopsis thaliana]
           gi|332002936|gb|AED90319.1| carbohydrate-binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 306

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 27/136 (19%)
 Frame = -2

Query: 412 ETDKTIVIYEDWDNVELQMVTEEESIAKSYIS------QEVVVGDSNKEDSMVNAD---- 263
           ET+KTI I EDWDN +LQM+ EE+ +  + IS      ++ V+G   +  S+V  +    
Sbjct: 171 ETNKTIRICEDWDNADLQMMIEEDFVPYTNISSIGSEDEDEVLGSVQQNSSVVAVENAGY 230

Query: 262 AEEDTVVNSN---TAESTISP----ITTIEKVAYPEAEQNDTEDSVLVPGLAPLSTTTVE 104
             +++  NS+    +E T+ P    +T  E +   EA   + E  VLVPGL PLS    E
Sbjct: 231 VSDESAQNSSFSIQSEKTMEPSNGALTAREVI--KEAMFTEEESPVLVPGLIPLSDLDNE 288

Query: 103 ----------ESFPQV 86
                     E+FP+V
Sbjct: 289 QVEVINEGKAETFPEV 304


Top