BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00020471
         (1727 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]   237   1e-71
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       226   2e-69
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   198   6e-68
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          203   2e-67
emb|CBI20118.3| unnamed protein product [Vitis vinifera]              213   3e-63
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   202   2e-62
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]   196   2e-61
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   197   7e-61
emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]   201   4e-60
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               182   2e-59
ref|XP_006409464.1| hypothetical protein EUTSA_v10023107mg, part...   237   3e-59
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]   195   2e-58
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...   196   5e-58
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...   196   5e-58
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc...   196   7e-58
emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]           195   7e-58
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo...   196   7e-58
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc...   196   1e-57
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]     194   1e-57
gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subc...   195   2e-57

>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score =  237 bits (604), Expect(2) = 1e-71
 Identities = 130/310 (41%), Positives = 185/310 (59%), Gaps = 14/310 (4%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D+GAT HV     GF + R++S+G   +++GNG+    + +G   L+ ++ R L L +VL
Sbjct: 616  DLGATNHVCNSLQGFQETRQLSKGEVNIFLGNGSEVAVLAVGNIALNFKNNRTLFLKNVL 675

Query: 710  YVPGIHHNILSVISLLNLGYSF---KIEDGMLDIFFYGTLFGHGYLCNNFF------KLD 558
            YVP I  N++ + SL   GYS    +  D  + I F   +   G L ++ +      +L 
Sbjct: 676  YVPSIRRNLIPISSLSKNGYSVCFNEFYDDSVVIKFREQMICSGSLIDSLYILKVTPELQ 735

Query: 557  LFNS-ASSETLVSDASSSSVIDC---VTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPV 390
            L NS  ++  +V+       I+      W+ RLGHI  DR++ L ++G L SL    LP 
Sbjct: 736  LTNSEVNNFDIVAPLKRKRPIELSYTYLWHLRLGHINLDRISLLVKDGPLSSLKVEALPT 795

Query: 389  CEPCLEGKACRKPFG-KAKRATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYV 213
            CE CLEGK  ++PF  K  RA   LEL+HSD+CGPM+V+AR G+ YF+TF DDY+RYGY+
Sbjct: 796  CESCLEGKMTKRPFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFVTFTDDYSRYGYI 855

Query: 212  YLIAHRYEALDCFKRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIP 33
            YL+  + E  + FK F AE+E + GK +KTLR+D G EY+S  F  F   +GIT QL+ P
Sbjct: 856  YLLCRKSECFEKFKAFKAEMEQRHGKYIKTLRSDHGGEYISREFITFLSEQGITSQLSAP 915

Query: 32   YTPQQNGVAE 3
              PQQNGVAE
Sbjct: 916  GMPQQNGVAE 925



 Score = 63.5 bits (153), Expect(2) = 1e-71
 Identities = 62/280 (22%), Positives = 118/280 (42%), Gaps = 14/280 (5%)
 Frame = -2

Query: 1702 MASNHVIADLNKGDKLDGKNYDVWHRKIQYXXXXXXXXXXXKNE-MVRPTEGHTTQHRRE 1526
            M S + +A++    KL+G NY  W R +                 + +P EG T   + +
Sbjct: 322  MTSFNPLANILTQXKLEGPNYVDWKRNLDILLTAEEYKFVLSEVCLEKPGEGAT---QDQ 378

Query: 1525 LEAYEAWVKKDRSARYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVL 1346
            ++A++ WVK D  AR  +L+SM N L  +++   T+  + + LK  +G  ++   ++ + 
Sbjct: 379  IKAHQKWVKADEMARCYILASMSNVLQHQHQKMDTAYDILENLKEMFGDQTSAARQNTLR 438

Query: 1345 RFEVYRKDPKQSMTEHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTH 1166
                 + +    +  H+ KM SL+ +++  G  +    Q+  V+ +LP S+   +  L +
Sbjct: 439  EILTSKMEEGTQVRTHVLKMMSLLNDMEVLGAEVDKATQIEMVLNTLPPSFQQFR--LNY 496

Query: 1165 NESIKNFSDISRHVELEAERQEATRMSTLYAQG--------ER-----KPQGKRKRNSQX 1025
            N +  +F+       L     E     T+  QG        ER     + +GK+K+N + 
Sbjct: 497  NMNKMDFT-------LSKLLNELVAAQTIIKQGAAPVVLNIERVFSSVQKKGKKKKNVK- 548

Query: 1024 XXXXXXXXXXXXXXXXXXXXXKSKMKCYNCGIKGHFGREC 905
                                 K K KC++C    H+  +C
Sbjct: 549  ------PNNNGAANGVNGVVKKPKGKCFHCKQPSHWKLQC 582



 Score = 66.6 bits (161), Expect = 7e-08
 Identities = 36/149 (24%), Positives = 71/149 (47%)
 Frame = -2

Query: 1555 EGHTTQHRRELEAYEAWVKKDRSARYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGT 1376
            EG T   ++ + A EAW   D   +  +L+ + N +   Y    T+K++W+ L+  Y   
Sbjct: 23   EGETD--KQIVAAVEAWKHSDFLCKNYILNGLDNTMYNVYSQVKTTKKLWESLEKKYKAE 80

Query: 1375 STTRLRSLVLRFEVYRKDPKQSMTEHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDS 1196
                 + +V +F  Y+    +++T  ++++  ++ EL +    LS+  QV A++  LP S
Sbjct: 81   DVGMKKFIVGKFLDYKMVDSKTVTSQVQELQIILHELHAEKMELSESFQVAAIVEKLPPS 140

Query: 1195 WVHMKQILTHNESIKNFSDISRHVELEAE 1109
            W   K  L H        D+   +++E +
Sbjct: 141  WKDFKNYLKHKHKEMGLEDLIVRLKIEED 169


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  226 bits (576), Expect(2) = 2e-69
 Identities = 125/308 (40%), Positives = 177/308 (57%), Gaps = 12/308 (3%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GAT H+         ++++  G   + +G G    A  +G   L  +  R L L DVL
Sbjct: 304  DSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQD-RYLILKDVL 362

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKL---------- 561
            YVP +  N++S+  +L   Y+   E   + I   G         NN +KL          
Sbjct: 363  YVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTRANVVLN 422

Query: 560  -DLFNSASSETLVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCE 384
             ++F +  ++      SS++ +    W+ RLGHI  +R+ RL + G L  L    LP CE
Sbjct: 423  TEMFRTLETQNKKQKVSSNAYL----WHLRLGHINLNRIERLVKSGILNQLEDNSLPPCE 478

Query: 383  PCLEGKACRKPF-GKAKRATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYL 207
             CLEGK  ++ F GK  RA  PLELVHSD+CGPMNVKAR GY YF++FIDD++RYG+VYL
Sbjct: 479  SCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYL 538

Query: 206  IAHRYEALDCFKRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYT 27
            + H+ E+ + FK + AEVEN+ GK++KTLR+DRG EY+   F+++    GI  QL+ P T
Sbjct: 539  LHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPST 598

Query: 26   PQQNGVAE 3
            PQQNGV+E
Sbjct: 599  PQQNGVSE 606



 Score = 67.0 bits (162), Expect(2) = 2e-69
 Identities = 67/291 (23%), Positives = 114/291 (39%), Gaps = 18/291 (6%)
 Frame = -2

Query: 1693 NHVIADLNKGDKLDGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEGHTTQHRRELEAY 1514
            N  I  L   +KL+G NY  W   +               E   P       +R   EAY
Sbjct: 2    NTSIVQLLASEKLNGDNYSAWKSNLNTILVVDDLRFVLTEEC--PQAPALNANRTVREAY 59

Query: 1513 EAWVKKDRSARYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEV 1334
            + WVK +  AR  +L+SM + L  +++   T+K + D L+  +G  S +     +     
Sbjct: 60   DRWVKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYT 119

Query: 1333 YRKDPKQSMTEHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWV------------ 1190
             R     S+ EH+  M       +  G  + +  QV  +++SLP S+V            
Sbjct: 120  KRMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIE 179

Query: 1189 -HMKQILTHNESIKNFSDISRHVELEA-----ERQEATRMSTLYAQGERKPQGKRKRNSQ 1028
             ++  +L   +  +N + +S+  E+EA     +R+     S+    G  K Q K+K   +
Sbjct: 180  FNLTTLLNELQRFQNLT-LSKGKEVEANVAVTKRKFIRGSSSKNKVGPSKAQMKKKGKGK 238

Query: 1027 XXXXXXXXXXXXXXXXXXXXXXKSKMKCYNCGIKGHFGRECTEPKKIWEQQ 875
                                    K KC++C   GH+ R C  PK + E++
Sbjct: 239  ------------APNTSKVKKNADKGKCFHCNQDGHWKRNC--PKYLAEKK 275


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  198 bits (504), Expect(2) = 6e-68
 Identities = 116/301 (38%), Positives = 163/301 (54%), Gaps = 5/301 (1%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GAT+H+  ++  F  Y+ + +   +++MGN +     G G   L M SG+ LTL+DVL
Sbjct: 466  DTGATRHICSNKWMFSTYKPVEQNE-ELFMGNSSSSKIEGRGKVILKMTSGKELTLNDVL 524

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++S   L   G+          +       G GYL +  FK+++        
Sbjct: 525  HVPDICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGLFKMNVMTVVPKSI 584

Query: 530  LVSDASSSSVI--DCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPV---CEPCLEGK 366
              +   SS+ +      W+ RLGH+  D + RL    HL  L K  +     CE C+E K
Sbjct: 585  NNNKIDSSAYLLKSSNIWHGRLGHVNYDTLCRLI---HLDYLPKFNIDPNHKCETCVESK 641

Query: 365  ACRKPFGKAKRATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEA 186
              + PF   +R+T+PL+L HSDIC    V+ R G  YF+TFIDD TRY YVYL+  + EA
Sbjct: 642  LTKVPFHSVERSTEPLDLFHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEA 701

Query: 185  LDCFKRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVA 6
            ++ FK +  EVENQ  K +K +R+DRG EY S  F EFC   GI  Q   PY+PQ NG+A
Sbjct: 702  IEMFKHYKIEVENQLSKKIKAIRSDRGGEYESP-FEEFCLEHGIIHQTIAPYSPQSNGMA 760

Query: 5    E 3
            E
Sbjct: 761  E 761



 Score = 89.4 bits (220), Expect(2) = 6e-68
 Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 12/289 (4%)
 Frame = -2

Query: 1714 RLQEMASNHVIADLN-----KGDKLDGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEG 1550
            +L +MAS+  +  +N     K +K +G  +  W +K+ +             E     EG
Sbjct: 190  KLNQMASSSNVPIMNLIHGEKPEKFNGNEFKRWQQKMLFYLTTLNLARFLHEECPILEEG 249

Query: 1549 HTTQHRRELEAYEAWVKKDRSARYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTST 1370
             T  ++ ++   +AW   D   R  ML+ + N L   Y    T+K++WD L   Y     
Sbjct: 250  ET--NKEKVAVVDAWKHSDFLCRNYMLNGLDNTLYNVYCSLKTAKELWDSLDKKYKTEDA 307

Query: 1369 TRLRSLVLRFEVYRKDPKQSMTEHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWV 1190
               + +V +F  ++    +++   ++++  ++ E+ S G   SD  QV AVI  LP  W 
Sbjct: 308  GIKKFIVGKFLDFKMIDSKTVISQVQELQVILHEIHSEGMSFSDSFQVAAVIEKLPPLWK 367

Query: 1189 HMKQILTHNESIKNFSDISRHVELEAERQEATRM--STLYAQGERKPQG-----KRKRNS 1031
              K  L H     N  ++   + +E + +++ +   +++ A+     QG     KRK   
Sbjct: 368  DFKNYLKHKRKEMNLEELIVRLRIEEDNRKSEKKGNNSMEAKANVIEQGPKTNKKRKHGD 427

Query: 1030 QXXXXXXXXXXXXXXXXXXXXXXKSKMKCYNCGIKGHFGRECTEPKKIW 884
            Q                        K KCYNCG  GH   +    K+ W
Sbjct: 428  QNQNQESNVAKKF------------KGKCYNCGKTGHKSNDYRNTKEWW 464


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  203 bits (516), Expect(2) = 2e-67
 Identities = 115/298 (38%), Positives = 167/298 (56%), Gaps = 2/298 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GAT+HV  D+  F  +   S    K++MGN    +  G G   L M SG+ LTL++VL
Sbjct: 328  DTGATRHVCSDKGLFTSFEAASNRE-KLFMGNSATSEIEGQGKVALKMTSGKELTLNNVL 386

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            YVP I  N++S   L   G+    E  M+ +   G   G GY+ +  FKL++       T
Sbjct: 387  YVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDGLFKLNVMTL--KPT 444

Query: 530  LVSDASSSSVI--DCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACR 357
            + + A+SS+ +      W+ RLGH+  + + +L    H+ +        C+ C+E K  R
Sbjct: 445  INNKATSSAYLLESSNIWHGRLGHVNFNSLRKLINMKHIPNFQIDLKHKCKTCVEAKLTR 504

Query: 356  KPFGKAKRATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDC 177
              F   +R ++PL+L+HSDIC   +++ R G  YF+TFIDD T+Y YVYL+  + EALD 
Sbjct: 505  SSFQIIQRNSEPLDLIHSDICDFKSIQTRGGNKYFITFIDDCTKYCYVYLLKSKDEALDK 564

Query: 176  FKRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            F  +  EVENQ  + +K LR+DRG EY+   F   CE  GI  Q+T PY+PQ NG+AE
Sbjct: 565  FILYKNEVENQLNRKIKELRSDRGGEYVVP-FMSLCEQSGIIHQVTAPYSPQSNGIAE 621



 Score = 83.2 bits (204), Expect(2) = 2e-67
 Identities = 55/259 (21%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
 Frame = -2

Query: 1663 DKLDGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEGHTTQHRRELEAYEAWVKKDRSA 1484
            +K +G+N+  W +K+ +             +  +P EG T    +   A +AW   D   
Sbjct: 43   EKFNGQNFKRWQQKMFFYLTTLNLARFLTKDAPKPKEGETDI--QVASAIDAWHHSDFLC 100

Query: 1483 RYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMT 1304
            +  +++ + + L   Y    T+K++W+ L   Y        + +V RF  ++    +++ 
Sbjct: 101  KNYVMNGLSDSLYNVYIGKKTAKELWESLDRKYKTEDAGTKKFVVGRFLDFKMVDSKTVI 160

Query: 1303 EHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDISRHV 1124
              ++++  ++ E+ + G  LS+  QV A+I  LP +W   K  L H +   N   +   +
Sbjct: 161  SQVQELQIILSEILAEGMHLSETFQVAAIIEKLPPAWKDFKSYLKHKQKEMNIEGLVVKL 220

Query: 1123 ELEAERQEATRMSTL-YAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMK 947
             +E + + A R+  +  A+      G +K+  +                        + K
Sbjct: 221  RIEEDNRNAERIGAISMAKANFVEHGPKKKKKKLGPKGGISKKQTKF----------QGK 270

Query: 946  CYNCGIKGHFGRECTEPKK 890
            CYNC   GH   +C  PKK
Sbjct: 271  CYNCDKMGHKASDCRLPKK 289


>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score =  213 bits (542), Expect(2) = 3e-63
 Identities = 116/311 (37%), Positives = 170/311 (54%), Gaps = 15/311 (4%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GAT HV     GF+  R+       +YMGN    + + +GTY+L + +G  + L +  
Sbjct: 666  DSGATTHVTNLMQGFLTTRKPKESEKFLYMGNRLKVEVVAVGTYRLLLETGHRMDLLNTF 725

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSE- 534
            YVP I  N++S+  L   GYS     G L +       G G LC+  +K+ L +  +   
Sbjct: 726  YVPSISRNLVSLSKLDATGYSVLFSSGQLSLMLNSVTIGSGILCDGLYKISLNHEFAQAL 785

Query: 533  -TLVSDASSSSVI----DCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEG 369
             TL S+  S   +      + W+ RLGHI ++R+ RL +EG L +L      VC  C++G
Sbjct: 786  ITLHSNVGSKRGLINENSSILWHRRLGHISRERIERLVKEGILQNLDFTDFHVCVNCIKG 845

Query: 368  KACRKPFGKAKRATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYE 189
            K  +     A R+ + LE++H+DICGP+++    G  YF+TFIDD +RYGYVYL+  + +
Sbjct: 846  KQTKHTKKGATRSNELLEIIHTDICGPLSIPCFTGEKYFITFIDDLSRYGYVYLMHEKSQ 905

Query: 188  ALDCFKRFVAEVENQTGKSLKTLRTDRGREYLS---------DMFREFCENKGITRQLTI 36
            A+D F+ F+ EVE Q  K +K +R+D+G EY             F +F E  GI  Q T+
Sbjct: 906  AIDIFEMFITEVERQLDKKIKIVRSDQGGEYYGRYDESGQNPGPFAKFLEKHGIRAQYTM 965

Query: 35   PYTPQQNGVAE 3
            P TPQQNGVAE
Sbjct: 966  PGTPQQNGVAE 976



 Score = 58.9 bits (141), Expect(2) = 3e-63
 Identities = 49/264 (18%), Positives = 104/264 (39%), Gaps = 2/264 (0%)
 Frame = -2

Query: 1654 DGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEGHTTQHRRELEAYEAWVKKDRSARYT 1475
            DG N+  W+ + Q+            ++  +P E        ++E  +AW K +R +   
Sbjct: 388  DGSNFSEWYERGQFSLGILDLDLALISD--KPPEATDDSTPEQVEQSKAWSKSNRLSLMF 445

Query: 1474 MLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMTEHL 1295
            M  ++ N++         + +    ++  +     +   +L+      + D ++ + +H+
Sbjct: 446  MRMTIANNIKTSLPQTEFASEFLKSVEERFKRADKSLAGTLMAELTTMKYDGQKGIQQHI 505

Query: 1294 RKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDI-SRHVEL 1118
              M+    +LK+ G  + +   V  V+ SLP  +   K     N    N +++ S+ ++ 
Sbjct: 506  LNMTEKTAKLKALGMGMDESFLVQFVLNSLPSQFAPFKIHYNTNSDQWNLNELTSKCIQE 565

Query: 1117 EAE-RQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMKCY 941
            E   RQE   ++     G  K +GK K+                            + CY
Sbjct: 566  EVRLRQEGHNLALAVTHGVTKKKGKFKKGRNFPPKKSGPGEGSQNHDGKFT-----VSCY 620

Query: 940  NCGIKGHFGRECTEPKKIWEQQNM 869
             CG KGH  ++C + K  +E++ +
Sbjct: 621  FCGKKGHVKKDCIKRKAWFEKRGI 644


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  202 bits (515), Expect(2) = 2e-62
 Identities = 116/297 (39%), Positives = 165/297 (55%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GAT H+  DR+ F  ++  +     V MGNG      G G   L + SG+ L L DVL
Sbjct: 320  DSGATVHICADRSMFSSFQGFNSAP--VLMGNGVPAAVRGTGQVYLKLTSGKTLVLKDVL 377

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            YVP +  N++SV  L   G     E   + +  +GT  G  Y     F+L + N+ SS  
Sbjct: 378  YVPSMSRNLISVSLLCRQGLKLVFESNKVVLSKFGTFVGKSYESGGLFRLSVLNNHSSYH 437

Query: 530  LVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKP 351
            +    ++ S+ +   W++RL H+  + + RL+    +     V    C  C++ K  RKP
Sbjct: 438  VNVVCNNDSINNI--WHSRLCHVNFEAIKRLSDMSLIPEYKHVKGVKCGICVQAKQPRKP 495

Query: 350  FGKAK-RATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
            F   + R+T PLEL+HSDIC    +  + G  YFLT IDD TR+ Y+YL+  + EAL+ F
Sbjct: 496  FHTVEGRSTTPLELIHSDICEMNGIIIKGGKRYFLTLIDDATRFCYIYLLRTKDEALEHF 555

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            K +  EVENQ  K +K LR+DRG EYLS++F E+C+  GI  + T PY+PQ NGVAE
Sbjct: 556  KIYKTEVENQLDKKIKRLRSDRGGEYLSNLFDEYCKECGIIHETTAPYSPQSNGVAE 612



 Score = 66.6 bits (161), Expect(2) = 2e-62
 Identities = 56/273 (20%), Positives = 104/273 (38%), Gaps = 14/273 (5%)
 Frame = -2

Query: 1681 ADLNKGDKLDGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEGHTTQHRRELEAYEA-- 1508
            +D+ K +  DG ++  W  K +             + + +     +    +     E   
Sbjct: 22   SDVIKPEAFDGASFKRWQIKTRMWLTDLKLFWVVTSAVPQAASDDSDDAAKAAALAEKAK 81

Query: 1507 WVKKDRSARYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYR 1328
            W + + +    +L+ + N L   Y  F ++K +W  L+ ++              +  Y+
Sbjct: 82   WDEANEACLSRLLNVLSNRLFDVYSAFTSAKGLWTDLENEFSEVDNGNESFTTENYLNYK 141

Query: 1327 KDPKQSMTEHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKN 1148
                +S+ E L+++  L+R+L   G VL D  QV A++  LP SW        H +    
Sbjct: 142  MVEGRSVMEQLQEIQLLVRDLVQYGCVLPDSFQVNAILAKLPPSWRDFVTSRRHMKKQMT 201

Query: 1147 FSDISRHVELEAERQEATRMS------TLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXX 986
             +++S  + +E   + + + S       +   G+RK Q K+K + Q              
Sbjct: 202  LTELSAAINVEERARSSNKPSQQLQAHVVEKGGDRKFQKKKKNSPQ-------------- 247

Query: 985  XXXXXXXXKSKMK------CYNCGIKGHFGREC 905
                      KMK      CY CG+ GH  R C
Sbjct: 248  -KNLNQPKSKKMKKKEDFICYVCGVSGHTARRC 279


>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
          Length = 791

 Score =  196 bits (498), Expect(2) = 2e-61
 Identities = 106/279 (37%), Positives = 161/279 (57%), Gaps = 4/279 (1%)
 Frame = -1

Query: 827  SRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVLYVPGIHHNILSVISLLNLGYS 648
            ++G  +V MGN      +G GT +++  SG+ +TL +VLYVP ++ N++S   L    + 
Sbjct: 308  AKGDQEVQMGNEGRSKVLGKGTIEVAFTSGKRVTLINVLYVPDMNKNLVSGDLLGKPSFK 367

Query: 647  FKIEDGMLDIFFYGTLFGHGYLCNNFFKL----DLFNSASSETLVSDASSSSVIDCVTWY 480
               E G L +   G   G+GY C+   KL    ++   AS+   + D++S      + W+
Sbjct: 368  AVFESGKLILSKSGNFVGNGYSCDGMIKLCTNDNIIKMASTSAYMCDSNS-----LILWH 422

Query: 479  ARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKPFGKAKRATQPLELVHSD 300
             RL H+G   + R+ + G +    K F   CE C++ K  +KPF   +R++  L+L+HSD
Sbjct: 423  NRLAHVGLSIIKRIVKCGLIACDTKKF-EKCEICVKSKMIKKPFHSVERSSNLLDLIHSD 481

Query: 299  ICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCFKRFVAEVENQTGKSLKTL 120
            +C    +  R G  YFLTFIDD +R+ YV+L+ ++ E  + FK + A+VENQ GK++K L
Sbjct: 482  LCELNGMLTRGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYNAKVENQLGKNIKVL 541

Query: 119  RTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            R+DRG EY S  F  FCE  GI  + T PYTPQ NG+AE
Sbjct: 542  RSDRGGEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAE 580



 Score = 69.7 bits (169), Expect(2) = 2e-61
 Identities = 51/261 (19%), Positives = 104/261 (39%), Gaps = 3/261 (1%)
 Frame = -2

Query: 1678 DLNKGDKLDGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEGHTTQHRRELEAYEAWVK 1499
            DL + D+ DG N+  W  K+++              +    E       + + A +   K
Sbjct: 12   DLVRLDRFDGSNFTRWQDKVRFLLTALKIFYILDPTLAPLPEPKENDTPQVVAARKKREK 71

Query: 1498 KDRSARYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDP 1319
             +   R  +L+++ + L   Y +  +++++W+ L+  Y        R L+ ++  ++   
Sbjct: 72   DELICRGHILNALSDRLYDLYTNTNSAREIWEALENKYKAEEEGTKRFLISQYIDFKFVD 131

Query: 1318 KQSMTEHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSD 1139
            ++ +   + K+  ++ +LK     L +  QV A++  LP SW   ++ + H     +  +
Sbjct: 132  EKPLLPQIHKLQVIVNKLKVLKIELPEAFQVGAIVVKLPSSWKGYRKRILHKSEDYSLEE 191

Query: 1138 ISRHVELEAERQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXK 959
            I +H+ +E E +   +M      G  K     K N                        +
Sbjct: 192  IQKHLRIEEESRSRDKMVEESNGGTNKANAVSKANHPKGKNNNNKKNSGNYMSPKKNQEQ 251

Query: 958  SKMK---CYNCGIKGHFGREC 905
             K K   C+ CG  GH+ REC
Sbjct: 252  FKGKKGLCFVCGKPGHYAREC 272


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  197 bits (502), Expect(2) = 7e-61
 Identities = 115/299 (38%), Positives = 165/299 (55%), Gaps = 3/299 (1%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D  AT HV  D++ F  +   ++G  +V MGN      +G GT ++   SG+ +TL +VL
Sbjct: 310  DTCATVHVTYDKSLFKTFED-AKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLKNVL 368

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKL---DLFNSAS 540
            YVP ++ N++S   L   G     E G L +   G   G GY C+   KL   D  N  +
Sbjct: 369  YVPDMNKNLVSGDLLGKPGIKAVFESGKLILTKSGNFVGKGYSCDGMIKLSTNDNINKMT 428

Query: 539  SETLVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKAC 360
            S +     S+S  +    W+ RL H+G   + R+ + G +    K F   CE C++ K  
Sbjct: 429  STSAYMCDSNSLXL----WHNRLAHVGLSTIKRIVKCGLIACDTKKF-EKCEICVKSKMI 483

Query: 359  RKPFGKAKRATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALD 180
            +KPF   +R++  L+L HSD+C    +  R G  YFLTFIDD +R+ YV+L+ ++ E  +
Sbjct: 484  KKPFHSVERSSNLLDLXHSDLCELNGMLTRGGNRYFLTFIDDCSRFTYVFLLKNKSETFN 543

Query: 179  CFKRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
             FK + AEVENQ  K++K LR+DRG EY S  F  FCE  GI  + T PYTPQ NG+AE
Sbjct: 544  AFKVYKAEVENQLXKNIKVLRSDRGXEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAE 602



 Score = 66.6 bits (161), Expect(2) = 7e-61
 Identities = 49/267 (18%), Positives = 106/267 (39%), Gaps = 9/267 (3%)
 Frame = -2

Query: 1678 DLNKGDKLDGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEGHTTQHRRELEAYEAWVK 1499
            DL + D+ DG N+  W  K+++              +    E       + + A +   +
Sbjct: 12   DLVRLDRFDGSNFXRWQDKVRFLLTALKIFYILDPTLXPLPEPKENDTPQVVAARKKREE 71

Query: 1498 KDRSARYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDP 1319
             +   R  +L+++ + L   Y +  +++++W+ L+  Y        + L+ ++  ++   
Sbjct: 72   DELICRGHILNALSDRLYDLYTNTXSAREIWEALENKYKAEEEGTKKFLISQYIDFKFFD 131

Query: 1318 KQSMTEHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSD 1139
            ++ +   + ++  ++ +LK     L +  QV A++  LP SW   ++ + H     +  +
Sbjct: 132  EKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKSEDYSLEE 191

Query: 1138 ISRHVELEAERQEATRMSTLYAQGERK---------PQGKRKRNSQXXXXXXXXXXXXXX 986
            I +H+ +E E +   +M      G  K         P+GK   N +              
Sbjct: 192  IQKHLRIEEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYMSPKKNQEQ 251

Query: 985  XXXXXXXXKSKMKCYNCGIKGHFGREC 905
                      K  C+ CG  GH+ REC
Sbjct: 252  FKG------KKGPCFVCGKPGHYAREC 272


>emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]
          Length = 1180

 Score =  201 bits (511), Expect(2) = 4e-60
 Identities = 110/298 (36%), Positives = 162/298 (54%), Gaps = 15/298 (5%)
 Frame = -1

Query: 851  GFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVLYVPGIHHNILSVI 672
            GF+  R+       +YMGN    + + +GTY+L + +G  + L +  YVP I  N++S+ 
Sbjct: 281  GFLTTRKPKESEKFLYMGNRLKXEVVAVGTYRLLLETGHRMDLLNTFYVPSISRNLVSLS 340

Query: 671  SLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSE--TLVSDASSSSVI 498
             L   GY      G L +       G G LC+  +K+ L +  +    TL S+  S   +
Sbjct: 341  KLDATGYXVLFSSGQLSLMLNSVTXGSGILCDGLYKIXLNHEFAQALITLHSNVGSKRGL 400

Query: 497  ----DCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKPFGKAKRA 330
                  + W+ RLGHI ++ + RL +EG L +L      VC  C++GK  +     A R+
Sbjct: 401  INENSSILWHRRLGHISREXIERLVKEGILQNLDFTDFHVCVDCIKGKQTKHTKKGATRS 460

Query: 329  TQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCFKRFVAEVE 150
             + LE++H+DICGP++V    G  YF+TFIDD +RYGYVYL+  + +A+D F+ F+ EVE
Sbjct: 461  NELLEIIHTDICGPLSVPCFTGEKYFITFIDDLSRYGYVYLMHEKSQAIDIFEMFITEVE 520

Query: 149  NQTGKSLKTLRTDRGREYLS---------DMFREFCENKGITRQLTIPYTPQQNGVAE 3
             Q  K +K +R+DRG EY             F +F E  GI  Q T+P TPQQNGVAE
Sbjct: 521  RQLDKKIKIVRSDRGGEYYGRYDESGQNPGPFAKFLEKHGIRAQYTMPGTPQQNGVAE 578



 Score = 60.5 bits (145), Expect(2) = 4e-60
 Identities = 50/264 (18%), Positives = 105/264 (39%), Gaps = 2/264 (0%)
 Frame = -2

Query: 1654 DGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEGHTTQHRRELEAYEAWVKKDRSARYT 1475
            DG N+  W+ ++Q+            ++  +P E        ++E  +AW K +R +   
Sbjct: 5    DGSNFSEWYERVQFSLGVLDLDLALISD--KPPEATDDSTPEQVEQSKAWXKSNRLSLMF 62

Query: 1474 MLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMTEHL 1295
            M  ++ N++         + +    ++  +     +   +L+      + D ++ + +H+
Sbjct: 63   MRMTIANNIKTSLXQTEFASEFLKSVEERFKRADKSLAGTLMXELTTMKYDGQKGIQQHI 122

Query: 1294 RKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDI-SRHVEL 1118
              M+    +LK+ G  + +   V  V+ SLP  +   K     N    N +++ S+ ++ 
Sbjct: 123  LNMTEKAAKLKALGMGMDESFLVQFVLNSLPSXFAPFKIHYNTNSDQWNLNELTSKCIQE 182

Query: 1117 EAE-RQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMKCY 941
            E   RQE    +     G  K +GK K+                            + CY
Sbjct: 183  EVRLRQEGHNXAXXVTHGVTKKKGKFKKGXNFPPKKSXPGEGSQSHDGKFT-----VSCY 237

Query: 940  NCGIKGHFGRECTEPKKIWEQQNM 869
             CG KGH  ++C + K  +E++ +
Sbjct: 238  FCGKKGHVKKDCIKRKAWFEKRGI 261


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  182 bits (462), Expect(2) = 2e-59
 Identities = 106/297 (35%), Positives = 155/297 (52%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GAT+H+  +R  F  Y  +  G  +VY+G+      +G G   L + SG+ L L+DVL
Sbjct: 325  DSGATRHICANRNVFTSYTSVGDGEEQVYLGDSRTTPVLGKGKVLLKLTSGKTLALNDVL 384

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++SV  L  +G     E   + I       G GY     F L++     SE 
Sbjct: 385  HVPSIRVNLVSVALLSKVGVKVSFESDKIVITKNNVFVGKGYCDQGLFVLNI-----SEI 439

Query: 530  LVSDASSSSVIDCVT-WYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRK 354
            +    SS+ ++D    W+ARLGH+    + +L R G +    K          E   C K
Sbjct: 440  MNESTSSAYIVDSYDIWHARLGHVNSSYVIKLQRLGLINMHDK----------ESSKCDK 489

Query: 353  PFGKAKRATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
              G          L+H+D+       +R G +YF+TFIDD++RY  VYLI H+ EA D F
Sbjct: 490  ILG----------LIHTDLADLKQTMSRGGKNYFVTFIDDFSRYTKVYLIKHKDEAFDMF 539

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
              + AEVENQ  K +K +R+DRG EY+  +F ++C  +GI  ++T PY+P+ NGVAE
Sbjct: 540  LTYKAEVENQLNKKIKRIRSDRGGEYV--LFNDYCVKEGIIHEVTPPYSPESNGVAE 594



 Score = 77.4 bits (189), Expect(2) = 2e-59
 Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 6/269 (2%)
 Frame = -2

Query: 1678 DLNKGDKLDGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEGHTTQHRRELEAYEAWVK 1499
            D++K +   G+N+  W  ++              + +       TT  ++     + W+ 
Sbjct: 32   DVSKIEVFTGQNFRRWQERVS----TLLDMYGVAHALTTAKPDSTTAAKQ----VDDWIH 83

Query: 1498 KDRSARYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDP 1319
             ++  R+T+LS + NDL   Y  +  +K +WD L L Y      R R ++ ++  +    
Sbjct: 84   ANKVCRHTLLSVLSNDLFDVYASYKNAKDIWDSLILKYTAEDIVRQRFVIAKYYRWEMIK 143

Query: 1318 KQSMTEHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSD 1139
             + +   + +   LI ++K+    L DE     +I  LP SW   KQ L H +   + SD
Sbjct: 144  GKDIKIQINEYHKLIEDIKTESIKLPDEFVSELLIEKLPQSWTDYKQQLKHRQKQMSLSD 203

Query: 1138 ISRHVELE-AERQE--ATRMSTLYAQG---ERKPQGKRKRNSQXXXXXXXXXXXXXXXXX 977
            +  H+ +E   R+E  A +   L A+    E KP    KR  +                 
Sbjct: 204  LITHIIIEDTNRKECAAAKAKALSAKANVIEDKP--APKRYEKKFDHKKKPNNKFSRPSG 261

Query: 976  XXXXXKSKMKCYNCGIKGHFGRECTEPKK 890
                 K K  C+ CG  GH   +C    K
Sbjct: 262  TNPTFKKKGNCFVCGKPGHHAPQCRHRAK 290


>ref|XP_006409464.1| hypothetical protein EUTSA_v10023107mg, partial [Eutrema salsugineum]
            gi|557110626|gb|ESQ50917.1| hypothetical protein
            EUTSA_v10023107mg, partial [Eutrema salsugineum]
          Length = 278

 Score =  237 bits (604), Expect = 3e-59
 Identities = 122/275 (44%), Positives = 168/275 (61%), Gaps = 5/275 (1%)
 Frame = -2

Query: 1699 ASNHVIADLNKGDKLDGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEGHTTQHRRELE 1520
            A  ++IA+LN+GDKLDG NYD+W+RK+QY            + M  P +G T QH ++ +
Sbjct: 4    ACKNIIAELNRGDKLDGDNYDIWYRKVQYVLEEQEVKETLFHHMEEPEQGTTAQHEKDQQ 63

Query: 1519 AYEAWVKKDRSARYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRF 1340
            A   W +K+  AR T+LS M + L+ E+E++ T+K MW+ LK  +G TS T+LR L  +F
Sbjct: 64   ACVVWKRKNSIARITLLSCMQDVLMCEFEEYETAKGMWEALKDKFGATSATKLRRLNQKF 123

Query: 1339 EVYRKDPKQSMTEHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNE 1160
              Y+K P QSM +HLR MS++IRELK+AG ++S+EQQV AV+RSLP+SW HMK  +THNE
Sbjct: 124  NDYKKRPNQSMRQHLRIMSNMIRELKNAGQIMSNEQQVQAVLRSLPESWDHMKVQMTHNE 183

Query: 1159 SIKNFSDISRHVELEAERQEATRMST-----LYAQGERKPQGKRKRNSQXXXXXXXXXXX 995
            + K F DIS H+ELE ER EA++  +         G ++ +G     +            
Sbjct: 184  NEKTFEDISHHLELEDERLEASKSFSEANFASSNSGLKRKKGNMGHKAPYQSELKRQKKD 243

Query: 994  XXXXXXXXXXXKSKMKCYNCGIKGHFGRECTEPKK 890
                       K+KMKCYNC   GHF RECTE KK
Sbjct: 244  AKRGKRGGKKDKTKMKCYNCSSLGHFSRECTEAKK 278


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score =  195 bits (496), Expect(2) = 2e-58
 Identities = 116/297 (39%), Positives = 158/297 (53%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GA  HV  D + F  Y+    G   + MGNG+    +G+GT  L   SG+ + L  V 
Sbjct: 319  DSGANIHVCADASMFTSYQVGRSGA--LLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQ 376

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++S   L   GY   +E     +  +GT  G GY C   F+L L +  +   
Sbjct: 377  HVPSIKKNLVSASMLCRDGYKVVLESNKCVVSKHGTFVGKGYDCGGLFRLSLHDVCNK-- 434

Query: 530  LVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKP 351
            LV+    S   D   W++R  H     + RLA    +     V    C  C+E K  RKP
Sbjct: 435  LVNSVHFSDESDL--WHSRFCHASFGCLMRLANINLIPKFNLVKKSKCHVCVESKQPRKP 492

Query: 350  FGKAK-RATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
               A+ R+  PLELVHSD+C    +  + G  YFLTFIDD TR+ YVYL+  + EA + F
Sbjct: 493  HKAAEARSLAPLELVHSDLCEMNGILTKGGKRYFLTFIDDSTRFCYVYLLKTKDEAFNYF 552

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            K + AEVENQ  + +K LR+DRG EY S++F EFC   GI  + T P++PQ NG+AE
Sbjct: 553  KAYKAEVENQLERKIKRLRSDRGGEYFSNVFDEFCVEHGIIHERTPPFSPQSNGIAE 609



 Score = 60.8 bits (146), Expect(2) = 2e-58
 Identities = 58/264 (21%), Positives = 96/264 (36%), Gaps = 5/264 (1%)
 Frame = -2

Query: 1669 KGDKLDGKNYDVWHRKIQYXXXXXXXXXXXKNEMVRPTEGHTTQHRRELEAYEAWVKKDR 1490
            K D  DGKN+ +W  K++                    EG       E EA   +  +D 
Sbjct: 25   KPDPFDGKNFLIWKAKMELWLTAM--------SCFHAAEGKPANLPPEDEA--KFKAEDN 74

Query: 1489 SARYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQS 1310
              R  ++S++       Y   PT K++WD L   +G T       L+ +   Y+    +S
Sbjct: 75   LFRGAVISALDTKFQKSYIILPTGKELWDALVGKFGVTDAGSELYLMEQLYDYKMVENRS 134

Query: 1309 MTEHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDISR 1130
            + E   +  +L +EL+     L D+     +I  LP SW      L H     N  ++  
Sbjct: 135  VVEQAHEFQALAKELELFPCPLPDKFVAGGIIAKLPPSWKDFATSLKHKRQEFNVEELIG 194

Query: 1129 HVELEAERQ-----EATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXX 965
             +++E   +     +    ST     +R  +   K+ +Q                     
Sbjct: 195  TLDVEERARTKDSGKGVETSTANVVQKRNFRKFNKKKNQNKQENANKPVHTAQFKKKNNN 254

Query: 964  XKSKMKCYNCGIKGHFGRECTEPK 893
             K K  C+ CG   H+ REC + K
Sbjct: 255  NKGKGGCFVCGSDQHWARECPDRK 278


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1448

 Score =  196 bits (497), Expect(2) = 5e-58
 Identities = 116/297 (39%), Positives = 160/297 (53%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GA  HV  D + F  Y+ + RG+  + MGNG+     G+GT  L   SG+ + L +V 
Sbjct: 448  DTGANIHVCADISLFSSYQ-VGRGS-SLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQ 505

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++S   L   G+    E     +  YGT  G GY     F+  L +  ++  
Sbjct: 506  HVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHN 565

Query: 530  LVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKP 351
             V+  S +   +   W++RL H+    MTRLA    +     V    C  C++ K  RKP
Sbjct: 566  AVNHISEND--ESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKP 623

Query: 350  FGKAK-RATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
               ++ R   PLELVHSD+C    V  + G  YF+T IDD TR+ YVYL+  + EAL  F
Sbjct: 624  HKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYF 683

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            K + AEVENQ  + +K LR+DRG EY S+ F  FCE  GI  ++T PY+PQ NGVAE
Sbjct: 684  KIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAE 740



 Score = 58.9 bits (141), Expect(2) = 5e-58
 Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
 Frame = -2

Query: 1483 RYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMT 1304
            R  ++S + ++++  Y   P+ K MWD L+  +G +       ++ +F  Y+    +S+ 
Sbjct: 212  RGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDNRSVV 271

Query: 1303 EHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDISRHV 1124
            E   ++  L +EL++    L D+     +I  LP SW      L H     + SD+   +
Sbjct: 272  EQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVSDLIGSL 331

Query: 1123 ELEAERQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMK- 947
             +E E+  A  +     +G       +K+N                        K K K 
Sbjct: 332  GVE-EKARAKDVRGKKVEGCSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKGKGKA 390

Query: 946  ---CYNCGIKGHFGRECTEPK 893
               C+ CG  GH+ ++C E K
Sbjct: 391  KGDCFVCGKSGHWAKDCPERK 411


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1298

 Score =  196 bits (497), Expect(2) = 5e-58
 Identities = 116/297 (39%), Positives = 160/297 (53%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GA  HV  D + F  Y+ + RG+  + MGNG+     G+GT  L   SG+ + L +V 
Sbjct: 413  DTGANIHVCADISLFSSYQ-VGRGS-SLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQ 470

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++S   L   G+    E     +  YGT  G GY     F+  L +  ++  
Sbjct: 471  HVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHN 530

Query: 530  LVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKP 351
             V+  S +   +   W++RL H+    MTRLA    +     V    C  C++ K  RKP
Sbjct: 531  AVNHISEND--ESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKP 588

Query: 350  FGKAK-RATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
               ++ R   PLELVHSD+C    V  + G  YF+T IDD TR+ YVYL+  + EAL  F
Sbjct: 589  HKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFF 648

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            K + AEVENQ  + +K LR+DRG EY S+ F  FCE  GI  ++T PY+PQ NGVAE
Sbjct: 649  KIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAE 705



 Score = 58.9 bits (141), Expect(2) = 5e-58
 Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
 Frame = -2

Query: 1483 RYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMT 1304
            R  ++S + ++++  Y   P+ K MWD L+  +G +       ++ +F  Y+    +S+ 
Sbjct: 177  RGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVV 236

Query: 1303 EHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDISRHV 1124
            E   ++  L +EL++    L D+     +I  LP SW      L H     +  D+   +
Sbjct: 237  EQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSL 296

Query: 1123 ELEAERQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMK- 947
             +E E+  A  +     +G       +K+N                        KSK K 
Sbjct: 297  GVE-EKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKA 355

Query: 946  ---CYNCGIKGHFGRECTEPK 893
               C+ CG  GH+ ++C E K
Sbjct: 356  KGDCFVCGKSGHWAKDCPERK 376


>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1413

 Score =  196 bits (499), Expect(2) = 7e-58
 Identities = 116/297 (39%), Positives = 161/297 (54%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GA  HV  D + F  Y+ + RG+  + MGNG+     G+GT  L   SG+ + L +V 
Sbjct: 413  DTGANIHVCADISLFSSYQ-VGRGS-SLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQ 470

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++S   L   G+    E     +  YGT  G GY     F+  L +  ++  
Sbjct: 471  HVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHN 530

Query: 530  LVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKP 351
            +V+  S +   +   W++RL H+    MTRLA    +     V    C  C++ K  RKP
Sbjct: 531  VVNHISEND--ESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKP 588

Query: 350  FGKAK-RATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
               ++ R   PLELVHSD+C    V  + G  YF+T IDD TR+ YVYL+  + EAL  F
Sbjct: 589  HKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFF 648

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            K + AEVENQ  + +K LR+DRG EY S+ F  FCE  GI  ++T PY+PQ NGVAE
Sbjct: 649  KIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAE 705



 Score = 57.8 bits (138), Expect(2) = 7e-58
 Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
 Frame = -2

Query: 1483 RYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMT 1304
            R  ++S + ++++  Y   P+ K MWD L+  +G +       ++ +F  Y+    +S+ 
Sbjct: 177  RGALISVLADNIVDVYMHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDYKMVDDRSVV 236

Query: 1303 EHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDISRHV 1124
            E   ++  L +EL++    L D+     +I  LP SW      L H     +  D+   +
Sbjct: 237  EQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSL 296

Query: 1123 ELEAERQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMK- 947
             +E E+  A  +     +G       +K+N                        KSK K 
Sbjct: 297  GVE-EKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKA 355

Query: 946  ---CYNCGIKGHFGRECTEPK 893
               C+ CG  GH+ ++C E K
Sbjct: 356  KGDCFVCGKSGHWAKDCPERK 376


>emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]
          Length = 1413

 Score =  195 bits (496), Expect(2) = 7e-58
 Identities = 115/297 (38%), Positives = 160/297 (53%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GA  HV  D + F  Y+ + RG + + MGNG+     G+GT  L   SG+ + L +V 
Sbjct: 413  DTGANIHVCADISLFSSYQ-VGRG-FSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQ 470

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++S   L   G+    E     +  YGT  G GY     F+  L +  ++  
Sbjct: 471  HVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHN 530

Query: 530  LVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKP 351
             V+  S +   +   W++RL H+    MTRLA    +     V    C  C++ K  RKP
Sbjct: 531  AVNHISEND--ESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKP 588

Query: 350  FGKAK-RATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
               ++ R   PLELVHSD+C    V  + G  YF+T IDD TR+ YVYL+  + EAL  F
Sbjct: 589  HKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFF 648

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            K + AEVENQ  + +K LR+DRG EY S+ F  FCE  GI  ++T PY+PQ NG+AE
Sbjct: 649  KIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGMAE 705



 Score = 58.9 bits (141), Expect(2) = 7e-58
 Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
 Frame = -2

Query: 1483 RYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMT 1304
            R  ++S + ++++  Y   P+ K MWD L+  +G +       ++ +F  Y+    +S+ 
Sbjct: 177  RGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVV 236

Query: 1303 EHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDISRHV 1124
            E   ++  L +EL++    L D+     +I  LP SW      L H     +  D+   +
Sbjct: 237  EQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSL 296

Query: 1123 ELEAERQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMK- 947
             +E E+  A  +     +G       +K+N                        KSK K 
Sbjct: 297  GVE-EKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKA 355

Query: 946  ---CYNCGIKGHFGRECTEPK 893
               C+ CG  GH+ ++C E K
Sbjct: 356  KGDCFVCGKSGHWAKDCPERK 376


>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1394

 Score =  196 bits (499), Expect(2) = 7e-58
 Identities = 116/297 (39%), Positives = 161/297 (54%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GA  HV  D + F  Y+ + RG+  + MGNG+     G+GT  L   SG+ + L +V 
Sbjct: 394  DTGANIHVCADISLFSSYQ-VGRGS-SLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQ 451

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++S   L   G+    E     +  YGT  G GY     F+  L +  ++  
Sbjct: 452  HVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHN 511

Query: 530  LVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKP 351
            +V+  S +   +   W++RL H+    MTRLA    +     V    C  C++ K  RKP
Sbjct: 512  VVNHISEND--ESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKP 569

Query: 350  FGKAK-RATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
               ++ R   PLELVHSD+C    V  + G  YF+T IDD TR+ YVYL+  + EAL  F
Sbjct: 570  HKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFF 629

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            K + AEVENQ  + +K LR+DRG EY S+ F  FCE  GI  ++T PY+PQ NGVAE
Sbjct: 630  KIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAE 686



 Score = 57.8 bits (138), Expect(2) = 7e-58
 Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
 Frame = -2

Query: 1483 RYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMT 1304
            R  ++S + ++++  Y   P+ K MWD L+  +G +       ++ +F  Y+    +S+ 
Sbjct: 158  RGALISVLADNIVDVYMHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDYKMVDDRSVV 217

Query: 1303 EHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDISRHV 1124
            E   ++  L +EL++    L D+     +I  LP SW      L H     +  D+   +
Sbjct: 218  EQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSL 277

Query: 1123 ELEAERQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMK- 947
             +E E+  A  +     +G       +K+N                        KSK K 
Sbjct: 278  GVE-EKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKA 336

Query: 946  ---CYNCGIKGHFGRECTEPK 893
               C+ CG  GH+ ++C E K
Sbjct: 337  KGDCFVCGKSGHWAKDCPERK 357


>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  196 bits (497), Expect(2) = 1e-57
 Identities = 116/297 (39%), Positives = 160/297 (53%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GA  HV  D + F  Y+ + RG+  + MGNG+     G+GT  L   SG+ + L +V 
Sbjct: 413  DTGANIHVCADISLFSSYQ-VGRGS-SLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQ 470

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++S   L   G+    E     +  YGT  G GY     F+  L +  ++  
Sbjct: 471  HVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHN 530

Query: 530  LVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKP 351
             V+  S +   +   W++RL H+    MTRLA    +     V    C  C++ K  RKP
Sbjct: 531  AVNHISEND--ESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKP 588

Query: 350  FGKAK-RATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
               ++ R   PLELVHSD+C    V  + G  YF+T IDD TR+ YVYL+  + EAL  F
Sbjct: 589  HKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFF 648

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            K + AEVENQ  + +K LR+DRG EY S+ F  FCE  GI  ++T PY+PQ NGVAE
Sbjct: 649  KIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAE 705



 Score = 57.8 bits (138), Expect(2) = 1e-57
 Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
 Frame = -2

Query: 1483 RYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMT 1304
            R  ++S + ++++  Y   P+ K MWD L+  +G +       ++ +F  Y+    +S+ 
Sbjct: 177  RGALISVLADNIVDVYMHMPSRKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVV 236

Query: 1303 EHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDISRHV 1124
            E   ++  L +EL++    L D+     +I  LP SW      L H     +  D+   +
Sbjct: 237  EQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSL 296

Query: 1123 ELEAERQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMK- 947
             +E E+  A  +     +G       +K+N                        KSK K 
Sbjct: 297  GVE-EKARAKDVRGKKVEGGCSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKA 355

Query: 946  ---CYNCGIKGHFGRECTEPK 893
               C+ CG  GH+ ++C E K
Sbjct: 356  KGDCFVCGKSGHWAKDCPERK 376


>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  194 bits (494), Expect(2) = 1e-57
 Identities = 116/297 (39%), Positives = 159/297 (53%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GA  HV  D + F  Y+ + RG+  + MGNG+     G+GT  L   SG+ + L +V 
Sbjct: 268  DTGANIHVCADISLFSSYQ-VGRGS-SLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQ 325

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++S   L   G+    E     +  YGT  G GY     F+  L +  ++  
Sbjct: 326  HVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHN 385

Query: 530  LVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKP 351
             V+  S +   +   W++RL H+    MTRLA    +     V    C  C++ K  RKP
Sbjct: 386  AVNHISEND--ESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKDSKCHTCVQSKQPRKP 443

Query: 350  FGKAK-RATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
               ++ R   PLELVHSD+C    V  + G  YF T IDD TR+ YVYL+  + EAL  F
Sbjct: 444  HKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFTTLIDDCTRFCYVYLLKTKDEALHFF 503

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            K + AEVENQ  + +K LR+DRG EY S+ F  FCE  GI  ++T PY+PQ NGVAE
Sbjct: 504  KIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAE 560



 Score = 58.5 bits (140), Expect(2) = 1e-57
 Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
 Frame = -2

Query: 1483 RYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMT 1304
            R  ++S + ++++  Y   P+ K MWD L+  +G +       ++ +F  Y+    +S+ 
Sbjct: 32   RGALISVLADNIVDVYMHMPSRKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVV 91

Query: 1303 EHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDISRHV 1124
            E   ++  L +EL++    L D+     +I  LP SW      L H     +  D+   +
Sbjct: 92   EQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSL 151

Query: 1123 ELEAERQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMK- 947
             +E E+  A  +     +G       +K+N                        KSK K 
Sbjct: 152  GVE-EKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKA 210

Query: 946  ---CYNCGIKGHFGRECTEPK 893
               C+ CG  GH+ ++C E K
Sbjct: 211  KGDCFVCGKSGHWAKDCPERK 231


>gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1457

 Score =  195 bits (495), Expect(2) = 2e-57
 Identities = 115/297 (38%), Positives = 160/297 (53%), Gaps = 1/297 (0%)
 Frame = -1

Query: 890  DMGATKHVARDRAGFVDYRRISRGTYKVYMGNGTCEDAIGIGTYKLSMRSGRILTLHDVL 711
            D GA  HV  D + F  Y+ + RG+  + MGNG+     G+GT  L   SG+ + L +V 
Sbjct: 457  DTGANIHVCADISLFSSYQ-VGRGS-SLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQ 514

Query: 710  YVPGIHHNILSVISLLNLGYSFKIEDGMLDIFFYGTLFGHGYLCNNFFKLDLFNSASSET 531
            +VP I  N++S   L   G+    E     +  YGT  G GY     F+  L +  ++  
Sbjct: 515  HVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHN 574

Query: 530  LVSDASSSSVIDCVTWYARLGHIGQDRMTRLAREGHLGSLAKVFLPVCEPCLEGKACRKP 351
             V+  S +   +   W++RL H+    MTRLA    +     V    C  C++ K  RKP
Sbjct: 575  AVNHISEND--ESNVWHSRLCHVNFGCMTRLANMSLISKFTLVKGSKCHTCVQSKQPRKP 632

Query: 350  FGKAK-RATQPLELVHSDICGPMNVKARHGYSYFLTFIDDYTRYGYVYLIAHRYEALDCF 174
               ++ R   PLELVHSD+C    V  + G  YF+T IDD TR+ YVYL+  + EAL  F
Sbjct: 633  HKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYF 692

Query: 173  KRFVAEVENQTGKSLKTLRTDRGREYLSDMFREFCENKGITRQLTIPYTPQQNGVAE 3
            K + AEVENQ  + +K LR+DRG EY S+ F  FCE  GI  +++ PY+PQ NGVAE
Sbjct: 693  KIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMSPPYSPQSNGVAE 749



 Score = 57.4 bits (137), Expect(2) = 2e-57
 Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
 Frame = -2

Query: 1483 RYTMLSSMHNDLIGEYEDFPTSKQMWDQLKLDYGGTSTTRLRSLVLRFEVYRKDPKQSMT 1304
            R  ++S + ++++  Y   P+ K MWD L+  +G +       ++ +F  Y+    +S+ 
Sbjct: 221  RGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVV 280

Query: 1303 EHLRKMSSLIRELKSAGHVLSDEQQVLAVIRSLPDSWVHMKQILTHNESIKNFSDISRHV 1124
            E   ++  L +EL++    L D+     +I  LP SW  +   L H     +  D+   +
Sbjct: 281  EQAYEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDLATSLKHKRQEFSVPDLIGSL 340

Query: 1123 ELEAERQEATRMSTLYAQGERKPQGKRKRNSQXXXXXXXXXXXXXXXXXXXXXXKSKMK- 947
             +E E+  A  +     +G       +K+N                        K K K 
Sbjct: 341  GVE-EKARAKYVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKGKGKA 399

Query: 946  ---CYNCGIKGHFGRECTEPK 893
               C+ CG  GH+ ++C E K
Sbjct: 400  KGDCFVCGKSGHWAKDCPERK 420