BLASTX nr result
ID: Papaver31_contig00020438
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00020438
(793 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC08960.1| RNA polymerase II second largest subunit [Peperom... 51 1e-09
gb|AAW22886.1| RNA polymerase II second largest subunit, partial... 49 4e-08
gb|AAY85216.1| RNA polymerase II second largest subunit, partial... 53 1e-07
gb|AAY85204.1| RNA polymerase II second largest subunit, partial... 53 1e-07
gb|AJS14100.1| RNA polymerase II second largest subunit, partial... 53 1e-07
gb|AAY85208.1| RNA polymerase II second largest subunit, partial... 52 1e-07
gb|AAY85203.1| RNA polymerase II second largest subunit, partial... 52 2e-07
ref|XP_011086076.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 57 2e-07
gb|AAY89340.1| RNA polymerase II second largest subunit [Berberi... 51 4e-07
gb|AAY85190.1| RNA polymerase II second largest subunit, partial... 51 4e-07
gb|AAY85223.1| RNA polymerase II second largest subunit, partial... 51 4e-07
gb|AAY89339.1| RNA polymerase II second largest subunit [Berberi... 51 4e-07
gb|AAY85217.1| RNA polymerase II second largest subunit, partial... 50 8e-07
gb|AJS14096.1| RNA polymerase II second largest subunit, partial... 55 9e-07
gb|AJS14120.1| RNA polymerase II second largest subunit, partial... 55 9e-07
gb|AFV74911.1| RNA polymerase II second largest subunit, partial... 55 9e-07
gb|AAY85200.1| RNA polymerase II second largest subunit, partial... 55 1e-06
ref|XP_008225092.1| PREDICTED: DNA-directed RNA polymerase II su... 54 2e-06
ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prun... 54 2e-06
gb|AAZ08462.1| RNA polymerase II second largest subunit [Platanu... 54 2e-06
>gb|AAC08960.1| RNA polymerase II second largest subunit [Peperomia caperata]
Length = 554
Score = 51.2 bits (121), Expect(3) = 1e-09
Identities = 37/98 (37%), Positives = 51/98 (52%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D Q AS ++ H + RHSES + + ++ G+
Sbjct: 366 KTSPIAQDESQGQASRYNRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 413
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 414 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 451
Score = 33.1 bits (74), Expect(3) = 1e-09
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -3
Query: 395 ITPDIILNPHLFLLK-EIGQLTDCIMGRL 312
ITPDII+N H + IGQL +CIMG++
Sbjct: 456 ITPDIIVNQHAIPSRMTIGQLIECIMGKV 484
Score = 25.8 bits (55), Expect(3) = 1e-09
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 340 GSYDKLDDDGLAPPG 354
>gb|AAW22886.1| RNA polymerase II second largest subunit, partial [Isoetes sp.
JZ73]
Length = 536
Score = 48.5 bits (114), Expect(2) = 4e-08
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = -2
Query: 534 GVGVDESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
G+ ++ +RS+ IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 402 GLRFVKTRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 443
Score = 37.0 bits (84), Expect(2) = 4e-08
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = -3
Query: 395 ITPDIILNPHLFLLK-EIGQLTDCIMGRL 312
ITPDII+NPH + IGQL +CIMG++
Sbjct: 448 ITPDIIVNPHAIXSRMTIGQLIECIMGKV 476
>gb|AAY85216.1| RNA polymerase II second largest subunit, partial [Hibbertia
scandens]
Length = 873
Score = 52.8 bits (125), Expect(3) = 1e-07
Identities = 37/98 (37%), Positives = 53/98 (54%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D+ Q V+S ++ H + RHSES + + ++ G+
Sbjct: 772 KTSPIAQDDAQGVSSRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 819
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 820 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 857
Score = 25.8 bits (55), Expect(3) = 1e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760
Score = 24.6 bits (52), Expect(3) = 1e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 395 ITPDIILNPH 366
ITPDII+NPH
Sbjct: 862 ITPDIIVNPH 871
>gb|AAY85204.1| RNA polymerase II second largest subunit, partial [Dillenia
suffruticosa]
Length = 868
Score = 52.8 bits (125), Expect(3) = 1e-07
Identities = 37/98 (37%), Positives = 53/98 (54%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D+ Q V+S ++ H + RHSES + + ++ G+
Sbjct: 767 KTSPIAQDDAQGVSSRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 814
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 815 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 852
Score = 25.8 bits (55), Expect(3) = 1e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 741 GSYDKLDDDGLAPPG 755
Score = 24.6 bits (52), Expect(3) = 1e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 395 ITPDIILNPH 366
ITPDII+NPH
Sbjct: 857 ITPDIIVNPH 866
>gb|AJS14100.1| RNA polymerase II second largest subunit, partial [Cervantesia
tomentosa]
Length = 391
Score = 52.8 bits (125), Expect(3) = 1e-07
Identities = 37/98 (37%), Positives = 51/98 (52%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D Q AS K+ H + RHSE+ I + ++ G+
Sbjct: 292 KTSPIAQDESQGQASRYTKRD-HSTSLRHSETGIVDQVLLTTN-----------ADGLRF 339
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RS+ IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 340 VKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 377
Score = 25.8 bits (55), Expect(3) = 1e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 266 GSYDKLDDDGLAPPG 280
Score = 24.6 bits (52), Expect(3) = 1e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 395 ITPDIILNPH 366
ITPDII+NPH
Sbjct: 382 ITPDIIVNPH 391
>gb|AAY85208.1| RNA polymerase II second largest subunit, partial [Euptelea
polyandra]
Length = 874
Score = 52.4 bits (124), Expect(3) = 1e-07
Identities = 36/98 (36%), Positives = 50/98 (51%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A++ Q AS + H + RHSES + + ++ G+
Sbjct: 772 KTTPIAQEESQGQASSRYTRRDHSTSLRHSESGMVDQVLLTTN-----------ADGLRF 820
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 821 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 858
Score = 25.8 bits (55), Expect(3) = 1e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760
Score = 24.6 bits (52), Expect(3) = 1e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 395 ITPDIILNPH 366
ITPDII+NPH
Sbjct: 863 ITPDIIVNPH 872
>gb|AAY85203.1| RNA polymerase II second largest subunit, partial [Dicentra formosa]
Length = 873
Score = 51.6 bits (122), Expect(3) = 2e-07
Identities = 37/98 (37%), Positives = 51/98 (52%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D Q AS ++ H + RHSES + + ++ G+
Sbjct: 772 KTTPIAQDESQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 819
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 820 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 857
Score = 25.8 bits (55), Expect(3) = 2e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760
Score = 24.6 bits (52), Expect(3) = 2e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 395 ITPDIILNPH 366
ITPDII+NPH
Sbjct: 862 ITPDIIVNPH 871
>ref|XP_011086076.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB2 [Sesamum indicum]
Length = 1195
Score = 57.0 bits (136), Expect(2) = 2e-07
Identities = 42/115 (36%), Positives = 58/115 (50%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P + D+ Q A+ K C H + RHSE+ I + ++I G+
Sbjct: 880 KTTPISPDDAQGPAARYTK-CDHSTSLRHSETGIVDQVLLITN-----------ADGLRF 927
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W + P P +IP
Sbjct: 928 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTQEGITPDIIVNPHAIP 982
Score = 25.8 bits (55), Expect(2) = 2e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 854 GSYDKLDDDGLAPPG 868
>gb|AAY89340.1| RNA polymerase II second largest subunit [Berberidopsis beckleri]
Length = 873
Score = 50.8 bits (120), Expect(3) = 4e-07
Identities = 36/98 (36%), Positives = 52/98 (53%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P ++D+ Q AS ++ H + RHSES + + ++ G+
Sbjct: 772 KTTPISQDDAQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 819
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 820 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 857
Score = 25.8 bits (55), Expect(3) = 4e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760
Score = 24.6 bits (52), Expect(3) = 4e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 395 ITPDIILNPH 366
ITPDII+NPH
Sbjct: 862 ITPDIIVNPH 871
>gb|AAY85190.1| RNA polymerase II second largest subunit, partial [Aextoxicon
punctatum]
Length = 873
Score = 50.8 bits (120), Expect(3) = 4e-07
Identities = 36/98 (36%), Positives = 52/98 (53%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P ++D+ Q AS ++ H + RHSES + + ++ G+
Sbjct: 772 KTTPISQDDAQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 819
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 820 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 857
Score = 25.8 bits (55), Expect(3) = 4e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760
Score = 24.6 bits (52), Expect(3) = 4e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 395 ITPDIILNPH 366
ITPDII+NPH
Sbjct: 862 ITPDIIVNPH 871
>gb|AAY85223.1| RNA polymerase II second largest subunit, partial [Nelumbo nucifera]
Length = 865
Score = 50.8 bits (120), Expect(3) = 4e-07
Identities = 36/98 (36%), Positives = 52/98 (53%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D+ Q +S ++ H + RHSES + + ++ G+
Sbjct: 764 KTTPIAQDDSQGQSSRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 811
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 812 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 849
Score = 25.8 bits (55), Expect(3) = 4e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 738 GSYDKLDDDGLAPPG 752
Score = 24.6 bits (52), Expect(3) = 4e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 395 ITPDIILNPH 366
ITPDII+NPH
Sbjct: 854 ITPDIIVNPH 863
>gb|AAY89339.1| RNA polymerase II second largest subunit [Berberidopsis corallina]
Length = 853
Score = 50.8 bits (120), Expect(3) = 4e-07
Identities = 36/98 (36%), Positives = 52/98 (53%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P ++D+ Q AS ++ H + RHSES + + ++ G+
Sbjct: 752 KTTPISQDDAQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 799
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 800 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 837
Score = 25.8 bits (55), Expect(3) = 4e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 726 GSYDKLDDDGLAPPG 740
Score = 24.6 bits (52), Expect(3) = 4e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 395 ITPDIILNPH 366
ITPDII+NPH
Sbjct: 842 ITPDIIVNPH 851
>gb|AAY85217.1| RNA polymerase II second largest subunit, partial [Muehlenbeckia
platyclada]
Length = 875
Score = 49.7 bits (117), Expect(3) = 8e-07
Identities = 35/98 (35%), Positives = 48/98 (48%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A D Q + + H + RHSE+ I + ++ G+
Sbjct: 773 KTTPLAPDEAQGPNAARYTRRDHSISLRHSENGIVDQVLLTTN-----------ADGLRF 821
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W
Sbjct: 822 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 859
Score = 25.8 bits (55), Expect(3) = 8e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 747 GSYDKLDDDGLAPPG 761
Score = 24.6 bits (52), Expect(3) = 8e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 395 ITPDIILNPH 366
ITPDII+NPH
Sbjct: 864 ITPDIIVNPH 873
>gb|AJS14096.1| RNA polymerase II second largest subunit, partial [Dendropemon
caribaeus]
Length = 562
Score = 54.7 bits (130), Expect(2) = 9e-07
Identities = 41/115 (35%), Positives = 57/115 (49%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D Q AS K+ H + RHSE+ I + ++ G+
Sbjct: 348 KTSPIAQDESQGQASRFTKRD-HSTSLRHSETGIVDQVLLTTN-----------ADGLRF 395
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
+ +RSV IP + KFSSRHG+ GT+GMT QED+ W +P P +IP
Sbjct: 396 VKVRVRSVRIPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEGINPDIIVNPHAIP 450
Score = 26.2 bits (56), Expect(2) = 9e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 322 GSYDKLDDDGLAPSG 336
>gb|AJS14120.1| RNA polymerase II second largest subunit, partial [Nuytsia
floribunda]
Length = 532
Score = 54.7 bits (130), Expect(2) = 9e-07
Identities = 41/115 (35%), Positives = 57/115 (49%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D Q AS K+ H + RHSE+ I + ++ G+
Sbjct: 318 KTSPIAQDESQGQASRFTKRD-HSTSLRHSETGIVDQVLLTTN-----------ADGLRF 365
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
+ +RSV IP + KFSSRHG+ GT+GMT QED+ W +P P +IP
Sbjct: 366 VKVRVRSVRIPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEGINPDIIVNPHAIP 420
Score = 26.2 bits (56), Expect(2) = 9e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 292 GSYDKLDDDGLAPSG 306
>gb|AFV74911.1| RNA polymerase II second largest subunit, partial [Loranthus kaoi]
Length = 480
Score = 54.7 bits (130), Expect(2) = 9e-07
Identities = 41/115 (35%), Positives = 57/115 (49%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D Q AS K+ H + RHSE+ I + ++ G+
Sbjct: 296 KTSPIAQDESQGQASRFTKRD-HSTSLRHSETGIVDQVLLTTN-----------ADGLRF 343
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
+ +RSV IP + KFSSRHG+ GT+GMT QED+ W +P P +IP
Sbjct: 344 VKVRVRSVRIPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEGINPDIIVNPHAIP 398
Score = 26.2 bits (56), Expect(2) = 9e-07
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 270 GSYDKLDDDGLAPSG 284
>gb|AAY85200.1| RNA polymerase II second largest subunit, partial [Coriaria
sarmentosa]
Length = 952
Score = 54.7 bits (130), Expect(2) = 1e-06
Identities = 40/115 (34%), Positives = 55/115 (47%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D Q A+ + H + RHSE+ I + ++ G+
Sbjct: 772 KTTPIAQDEAQGQAAARYTRSDHSISLRHSETGIVDQVLLTTN-----------ADGLRF 820
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W P P +IP
Sbjct: 821 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 875
Score = 25.8 bits (55), Expect(2) = 1e-06
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760
>ref|XP_008225092.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Prunus mume]
Length = 1192
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 40/115 (34%), Positives = 55/115 (47%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D Q A+ + H + RHSE+ I + ++ G+
Sbjct: 876 KTTPMAQDEAQGQAASRYTRRDHSISLRHSETGIVDQVLLTTN-----------ADGLRF 924
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W P P +IP
Sbjct: 925 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGVTPDIIVNPHAIP 979
Score = 25.8 bits (55), Expect(2) = 2e-06
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 850 GSYDKLDDDGLAPPG 864
>ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
gi|462410424|gb|EMJ15758.1| hypothetical protein
PRUPE_ppa000425mg [Prunus persica]
Length = 1192
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 40/115 (34%), Positives = 55/115 (47%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A+D Q A+ + H + RHSE+ I + ++ G+
Sbjct: 876 KTTPMAQDEAQGQAASRYTRRDHSISLRHSETGIVDQVLLTTN-----------ADGLRF 924
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W P P +IP
Sbjct: 925 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGVTPDIIVNPHAIP 979
Score = 25.8 bits (55), Expect(2) = 2e-06
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 850 GSYDKLDDDGLAPPG 864
>gb|AAZ08462.1| RNA polymerase II second largest subunit [Platanus orientalis]
Length = 923
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 41/115 (35%), Positives = 57/115 (49%)
Frame = -2
Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
KT P A++ PQ AS ++ H + RHSES + + ++ G+
Sbjct: 744 KTTPIAQEEPQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 791
Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
+ +RSV IP + KFSSRHG+ GTVGMT QED+ W P P +IP
Sbjct: 792 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 846
Score = 25.8 bits (55), Expect(2) = 2e-06
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 778 GLTDKLDNDGLAPHG 734
G DKLD+DGLAP G
Sbjct: 718 GSYDKLDDDGLAPPG 732