BLASTX nr result

ID: Papaver31_contig00020236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00020236
         (508 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001056664.1| Os06g0127500 [Oryza sativa Japonica Group] g...    40   1e-06
gb|EAY99488.1| hypothetical protein OsI_21456 [Oryza sativa Indi...    40   1e-06
gb|EMT00765.1| hypothetical protein F775_20767 [Aegilops tauschii]     42   6e-06

>ref|NP_001056664.1| Os06g0127500 [Oryza sativa Japonica Group]
           gi|25553563|dbj|BAC24834.1| putative RNA-binding protein
           [Oryza sativa Japonica Group]
           gi|55295879|dbj|BAD67747.1| putative RNA-binding protein
           [Oryza sativa Japonica Group]
           gi|113594704|dbj|BAF18578.1| Os06g0127500 [Oryza sativa
           Japonica Group]
          Length = 293

 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -1

Query: 487 MGLPGVKQEIPLPPDASNTLIVERLPAILLSADY--IYMSFFFYWRKTCIQGISSPMDAL 314
           +G  G   E PLPPDASNTL +E +P      +   I  S  F+            +  +
Sbjct: 146 IGFGGGMPEPPLPPDASNTLFIEGIPTDCARREVSRILKSHAFFC-----------LSLI 194

Query: 313 FHLVFTCWTFT 281
           FHL   CW+FT
Sbjct: 195 FHLHKFCWSFT 205



 Score = 39.3 bits (90), Expect(2) = 1e-06
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = -2

Query: 228 SKESRHSGGDPLVLCFVDF 172
           SKE+RH GGDP++LCFVDF
Sbjct: 224 SKEARHPGGDPILLCFVDF 242


>gb|EAY99488.1| hypothetical protein OsI_21456 [Oryza sativa Indica Group]
          Length = 227

 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -1

Query: 487 MGLPGVKQEIPLPPDASNTLIVERLPAILLSADY--IYMSFFFYWRKTCIQGISSPMDAL 314
           +G  G   E PLPPDASNTL +E +P      +   I  S  F+            +  +
Sbjct: 80  IGFGGGMPEPPLPPDASNTLFIEGIPTDCARREVSRILKSHAFFC-----------LSLI 128

Query: 313 FHLVFTCWTFT 281
           FHL   CW+FT
Sbjct: 129 FHLHKFCWSFT 139



 Score = 39.3 bits (90), Expect(2) = 1e-06
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = -2

Query: 228 SKESRHSGGDPLVLCFVDF 172
           SKE+RH GGDP++LCFVDF
Sbjct: 158 SKEARHPGGDPILLCFVDF 176


>gb|EMT00765.1| hypothetical protein F775_20767 [Aegilops tauschii]
          Length = 211

 Score = 42.4 bits (98), Expect(2) = 6e-06
 Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -2

Query: 300 SLVGPSLGLADIXXXXXXXXXXXV-SKESRHSGGDPLVLCFVDFIN 166
           S VGPSL   DI           + +KE RH GGDP+VLCFVDF N
Sbjct: 111 SPVGPSLFHPDIFRPFVGFQEVRLVNKEPRHPGGDPIVLCFVDFTN 156



 Score = 34.3 bits (77), Expect(2) = 6e-06
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 487 MGLPGVKQEIPLPPDASNTLIVERLP 410
           +G  G   E PLPPDASNTL +E +P
Sbjct: 77  VGFGGGMPEPPLPPDASNTLFIEGIP 102


Top