BLASTX nr result

ID: Papaver31_contig00016313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00016313
         (374 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006388077.1| hypothetical protein POPTR_0361s00200g [Popu...    57   5e-06

>ref|XP_006388077.1| hypothetical protein POPTR_0361s00200g [Populus trichocarpa]
           gi|550309404|gb|ERP46991.1| hypothetical protein
           POPTR_0361s00200g [Populus trichocarpa]
          Length = 1136

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
 Frame = -3

Query: 366 RLWLRXXXXXXXXXXXXXXDFSYEDMSQNDNR---------RQKVAFGRKMANCIKNVNG 214
           RLWL               +F+YE + ++  +            VAF   M   +K +NG
Sbjct: 64  RLWLERLQDVAYDAEDVLDEFAYEILRKDQKKGKVRYCFSLHNPVAFRLNMGQKVKEING 123

Query: 213 MLDEIIKDMGKLQIAAPTPDG--ESTEPPDRQVRSHVNESEIVGRGYDESHIIKLLTTDT 40
            LDEI K+    Q+ +   +G  E +  P+R+  S ++ SE+VGR  D S +++LLT+ T
Sbjct: 124 ALDEIRKEADLFQLTSLPVEGAQEVSRGPNRETHSFLDSSEVVGRDGDVSKVMELLTSLT 183

Query: 39  RSSSASSVNP 10
           +      V P
Sbjct: 184 KHQHVLPVVP 193


Top