BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00014717
         (3416 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1337   0.0  
ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...  1301   0.0  
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th...  1275   0.0  
ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabi...  1265   0.0  
emb|CDP19325.1| unnamed protein product [Coffea canephora]           1263   0.0  
ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [C...  1255   0.0  
gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sin...  1254   0.0  
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun...  1253   0.0  
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1251   0.0  
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu...  1246   0.0  
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1245   0.0  
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis...  1245   0.0  
ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...  1244   0.0  
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [S...  1243   0.0  
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [C...  1242   0.0  
ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [P...  1240   0.0  
ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 is...  1240   0.0  
ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phas...  1233   0.0  
gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gos...  1233   0.0  
ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...  1232   0.0  

>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score = 1337 bits (3460), Expect = 0.0
 Identities = 673/1054 (63%), Positives = 814/1054 (77%), Gaps = 6/1054 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQFET+ +    + LS  G L+F+G +L IS +F +IIVRP +  N+V  G L+VGFLV+
Sbjct: 56   VQFETLQAKRAADLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSGVLHVGFLVE 115

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
            +D   VLESW+ VK  V+PE++RVEFWV ++GE YKL V F DV+ S+  CLG       
Sbjct: 116  DDCMLVLESWEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGGKVNAL 175

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                  APKI+ K + P+  +    +RY I KE +EFLW+RTT+FSS+KS+G+S++F W+
Sbjct: 176  LLKLKYAPKIFQKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWE 235

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNS 2701
            + E     DI  SFP Y+  + + +LE  E  CS S LVPL++C S  KL+YEILFQLNS
Sbjct: 236  IKEGFPALDIFASFPYYKDLTEL-TLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNS 294

Query: 2700 LVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGNK 2521
            LVHAQK+S+ AV++D+IEILS+L +D+A  IL+KL + KST Y+ ISFI+ Q H    N 
Sbjct: 295  LVHAQKISLAAVDTDLIEILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINMNI 354

Query: 2520 SHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFVE 2341
             + P SS  +L NN +MSCHR L+TP+KIY LGPE+ES NYVVKH+  + SDF+RV+FVE
Sbjct: 355  KNLPPSSHSRLTNNNVMSCHRVLVTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSFVE 414

Query: 2340 EDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRSS 2161
            EDW KL S+A++ SI +  F+ P+RT IYHRILS+L  GIVIG KRF+FLAFSASQLRS+
Sbjct: 415  EDWSKLPSNALSMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSN 474

Query: 2160 SVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPDI 1981
            SVWMFASNDK+   DIREWMGCF  IRSVSKCAARMGQLFSSS Q L VP QDVE IPDI
Sbjct: 475  SVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDI 534

Query: 1980 EATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRKL 1801
            E T+DG  YCFSDGIGKISLSFAK VA+KC L   P AFQIRYGGYKGV+ VDRNSFRKL
Sbjct: 535  EVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKL 594

Query: 1800 SLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLDQ 1621
            SLR SM KF+S+NRML +T  S+  PCYLNREIV+LLSTLG+EDE F AL   Q+HLLD+
Sbjct: 595  SLRSSMLKFESQNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDENFEALLNEQMHLLDK 654

Query: 1620 ILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRSR 1441
            +LT+R+ A+  L  M   + K IL +MLLQGYEP+ EPYL MML+ YR+ QLSDIR+R R
Sbjct: 655  MLTNRQAALDVLESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCR 714

Query: 1440 IFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVVT 1261
            IFVPK R+LIGCLDET  L+YGQ YVRVT+T  E +C +Q FF  V D T++V+GKV+VT
Sbjct: 715  IFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHKCRNQSFFQKVDDTTSVVIGKVIVT 774

Query: 1260 KNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDE 1081
            KNPCLHPGDIRVL+AVYE  LE KGL DC++FPQKGERPHPNECSGGDLDGD +F+CWDE
Sbjct: 775  KNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWDE 834

Query: 1080 NLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPEK 901
             LIP   + PMDY +RRPRIMDHDVT+EEIQKFFVDYMINDTLG+ISTAHLVHADREPEK
Sbjct: 835  GLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEK 894

Query: 900  ARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLYR 721
            ARS KCLELATLHSMAVDFAKTGAPAEMPRVL+P+E+PDFMER D+ MY S+G LGKLYR
Sbjct: 895  ARSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYR 954

Query: 720  ATL-DRKENSMELVGQGQY---TYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYGA 553
            AT+  R       V  G      YD DLE +GFE +LE A+ H+ MYAEK+  LM++YGA
Sbjct: 955  ATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGA 1014

Query: 552  ETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKMA 373
            E+E+EMLTGNLR+   YLQ+D RR+T+MKDRI+ S K+LQKEAKEW + SCK H+H+KMA
Sbjct: 1015 ESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMA 1074

Query: 372  SAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            SAWYHVTYH  + +   NFLSFPWI G+ LL IK
Sbjct: 1075 SAWYHVTYHSTFSSQTPNFLSFPWIVGEVLLVIK 1108


>ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
            gi|720051127|ref|XP_010271988.1| PREDICTED: RNA-dependent
            RNA polymerase 2 [Nelumbo nucifera]
          Length = 1115

 Score = 1301 bits (3366), Expect = 0.0
 Identities = 666/1059 (62%), Positives = 802/1059 (75%), Gaps = 7/1059 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLSG--KLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQFETID+ NT++ LS   KL+F+G  L ISPSF++IIVRP ++ NRV  G L+VGFLV 
Sbjct: 55   VQFETIDAANTVSLLSEQRKLVFRGSVLVISPSFEDIIVRPVEARNRVDRGVLHVGFLVG 114

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
             D  +VLESWK VK +++PE+ RVEF+V +  E YKL + F DV +++GY L        
Sbjct: 115  VDHLSVLESWKGVKANIMPERKRVEFFVFKGKECYKLEINFSDVFTASGYRLRGRQSNAL 174

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                  APKIY KIS     +    +RY I KE  EFLWVRTT+FS   SIG SS+F W+
Sbjct: 175  LLRLRYAPKIYQKISGSTVASKFSTDRYHICKEDVEFLWVRTTDFSESNSIGWSSSFCWE 234

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNS 2701
            L+E    SDI+ SFP Y+ E     +E  EQ C  S+LVPLI    DS L+YEIL+QLNS
Sbjct: 235  LEEGLLSSDILRSFPYYKEELGDLIVEKEEQFCCESELVPLINSGLDSTLAYEILYQLNS 294

Query: 2700 LVHAQKLSIPAVNSD-VIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGN 2524
            LVH QK+S+ AV SD +IEIL  LS+D+A   L +L ++KST Y+ +  IQ QL + + N
Sbjct: 295  LVHTQKVSLRAVKSDDLIEILCCLSVDTANGFLLQLHKMKSTCYDPLPIIQRQLSSLLRN 354

Query: 2523 KSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFV 2344
            +    SSS+R L+   LMSCHR L+TPTKIY LGPE+E  N VV+H+  + SDF+RV+FV
Sbjct: 355  QKSLLSSSQRGLREGNLMSCHRVLVTPTKIYCLGPELEKSNCVVRHYAAYSSDFLRVSFV 414

Query: 2343 EEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRS 2164
            EEDW KL S A++TSIE+GIFSKPYRT IY+RILS+L +GI IG KRFEFLAFSASQLRS
Sbjct: 415  EEDWTKLHSGALSTSIEEGIFSKPYRTRIYYRILSILRDGIKIGAKRFEFLAFSASQLRS 474

Query: 2163 SSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPD 1984
            +SVWMFASN+ + A++IREWMG FN IRSVSKCAARMGQLFSSS +   V    VE IPD
Sbjct: 475  NSVWMFASNETVKAENIREWMGSFNKIRSVSKCAARMGQLFSSSVEASKVQAHHVEIIPD 534

Query: 1983 IEATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRK 1804
            +E T DGI+YCFSDGIGKIS SFA+ VA+KC L   P AFQIRYGGYKGV+ VDRNSF K
Sbjct: 535  VEITRDGIQYCFSDGIGKISQSFAREVAQKCGLSQTPSAFQIRYGGYKGVIAVDRNSFCK 594

Query: 1803 LSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLD 1624
            LSLR SM KF S +R L +T  S+ MPCYLNREIV+LLSTLG+EDEKF  LQ  QI LLD
Sbjct: 595  LSLRPSMLKFDSNDRTLNVTKWSESMPCYLNREIVSLLSTLGVEDEKFEMLQCKQISLLD 654

Query: 1623 QILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRS 1444
            ++LT+RE A+  L    AG+ K +L++MLL GYEP  EPYL M+L+ +R+ QLSDIRS+ 
Sbjct: 655  KMLTNREAALDVLE-CTAGDAKTVLVKMLLHGYEPGVEPYLSMILRAHREHQLSDIRSKC 713

Query: 1443 RIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVV 1264
            RI VPKGR+L+GCLDET  L+YGQ ++RVT+T  E     Q FFH V + T+IV+GKVV+
Sbjct: 714  RILVPKGRVLLGCLDETGILNYGQVFIRVTMTKAEQCHDDQSFFHQVDETTSIVIGKVVI 773

Query: 1263 TKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWD 1084
            TKNPCLHPGDIRVL+A+YE  LE KGL DCLVFPQKGERPHPNECSGGDLDGDL+FVCWD
Sbjct: 774  TKNPCLHPGDIRVLDAIYESALEEKGLVDCLVFPQKGERPHPNECSGGDLDGDLFFVCWD 833

Query: 1083 ENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPE 904
            ENLIP   DTPMDYI RR R+MDH+VT+EEIQK+FV+YMINDTLG+ISTAH++HADREP 
Sbjct: 834  ENLIPSQTDTPMDYIGRRSRLMDHEVTLEEIQKYFVNYMINDTLGVISTAHVIHADREPS 893

Query: 903  KARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLY 724
            KARS KCL+LA LHSMAVDFAKTGAPAEMPRVL+P+EYPDFMER DR MY S G+LGKLY
Sbjct: 894  KARSPKCLQLAALHSMAVDFAKTGAPAEMPRVLKPKEYPDFMERGDRPMYASPGILGKLY 953

Query: 723  RATLDRKEN-SMELVGQ---GQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYG 556
            R+T+D  +N   + V      Q  YD DLE  GFE ++ETAE H+ +Y EKL  LM+YYG
Sbjct: 954  RSTIDSTKNQEPDFVWNEEVAQAAYDKDLEVRGFESFVETAESHKKLYTEKLSTLMNYYG 1013

Query: 555  AETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKM 376
            A +E+E+LTGNLR  S  LQ+DK RY +MKDR++ + + LQKEAK WFHSSCK+HE  KM
Sbjct: 1014 ARSEDEILTGNLRSPSLCLQRDKIRYGEMKDRVLIAVRNLQKEAKGWFHSSCKSHECHKM 1073

Query: 375  ASAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIKQKGK 259
            ASAWYHVTYHP YC +G N LSFPWI  D LL+IK   K
Sbjct: 1074 ASAWYHVTYHPKYCHNGMNSLSFPWILDDILLNIKSVKK 1112


>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
            gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
            polymerase 2 isoform 1 [Theobroma cacao]
            gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
            2 isoform 1 [Theobroma cacao] gi|508773407|gb|EOY20663.1|
            RNA-dependent RNA polymerase 2 isoform 1 [Theobroma
            cacao]
          Length = 1149

 Score = 1275 bits (3300), Expect = 0.0
 Identities = 639/1055 (60%), Positives = 812/1055 (76%), Gaps = 7/1055 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQF T+++ +  + LS    L+F+  +LK+S ++ +II RP ++ +R+ GG L+VGF+VQ
Sbjct: 63   VQFATLEAKSKAHLLSLRNDLVFKSHSLKLSETYDDIIPRPIRADHRLDGGVLHVGFMVQ 122

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
            +D   VLE W+ V+  ++PE+ R+EFW+  NGE YKL V F DV+ + G C         
Sbjct: 123  DDYLRVLERWEDVRGWLMPERRRLEFWLWNNGECYKLEVLFDDVLETVGCCFNGSSCNAL 182

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                  AP+IY K+S P+  + +  +RY I KE+ +FLWVRTT+FS  K++G+S+AF W+
Sbjct: 183  LLRVKYAPRIYQKVSGPNIASKLRPDRYHICKENFDFLWVRTTDFSRTKAVGQSTAFYWE 242

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNS 2701
            ++      D+ + F  Y  + +  +L+   +  S  ++VPL++ PSDSKL+YEILFQLNS
Sbjct: 243  INAELLTLDLFSCFSCYREDMKGLTLKGGGEFSSAPEIVPLVKGPSDSKLAYEILFQLNS 302

Query: 2700 LVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGNK 2521
            LVH QK+SI +V++D+I+IL  L++++A  IL+K  ++ ST Y  +SF++  L  S  N 
Sbjct: 303  LVHTQKISIASVDTDLIDILRVLAVETAVMILQKFHKLLSTCYNPVSFVKENLPVSERNF 362

Query: 2520 SHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFVE 2341
              +P SS ++L ++ +MSCHRAL+TP+KIY LGPE+E+ NYVVK+F E+ SDFMRV+FVE
Sbjct: 363  QSRPLSSFKRLIDHNVMSCHRALVTPSKIYCLGPELETSNYVVKNFAEYASDFMRVSFVE 422

Query: 2340 EDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRSS 2161
            EDWGKL ++A++TS++ GIFSKP+RT IYHRILSVL +GIVIG KRFEFLAFSASQLRS+
Sbjct: 423  EDWGKLSANAISTSVQLGIFSKPFRTKIYHRILSVLQHGIVIGDKRFEFLAFSASQLRSN 482

Query: 2160 SVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPDI 1981
            SVWMFASNDK++A+D+REWMGCF  IRSVSKCAARMGQLFSSS   L VP QDV+ IPDI
Sbjct: 483  SVWMFASNDKVTAEDVREWMGCFKKIRSVSKCAARMGQLFSSSLPTLVVPVQDVKIIPDI 542

Query: 1980 EATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRKL 1801
            E T+DGI YCFSDGIGKISL FA+ VA+KC L   P AFQIRYGGYKGV+ VDRNSFRK+
Sbjct: 543  EVTSDGINYCFSDGIGKISLPFAREVAQKCGLNDTPSAFQIRYGGYKGVVAVDRNSFRKM 602

Query: 1800 SLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLDQ 1621
            SLR SM KF+SK RML +T  S+ MPC+LNREIVTLLSTLGI+DE F  LQQ Q+HLL Q
Sbjct: 603  SLRGSMHKFESKIRMLNVTKWSESMPCFLNREIVTLLSTLGIKDEAFETLQQEQLHLLGQ 662

Query: 1620 ILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRSR 1441
            +LT+RE A+  L  +   + + IL++MLLQGYEP+ EPYL MML       LSD++ R R
Sbjct: 663  MLTNREAALDVLQSLCGADSQNILVKMLLQGYEPNVEPYLSMMLLANHVSLLSDLKCRCR 722

Query: 1440 IFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVVT 1261
            I+VPKG++L+GCLDETATL+YGQ YVR+++   EL+   Q FFH V +KTAIV+GKVVVT
Sbjct: 723  IYVPKGQVLVGCLDETATLNYGQVYVRLSIKKAELEHADQNFFHKVDEKTAIVIGKVVVT 782

Query: 1260 KNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDE 1081
            KNPCLHPGD+RVL AVYE  LE KGL DCLVFPQKGERPHPNECSGGDLDGD +F+ WD+
Sbjct: 783  KNPCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDK 842

Query: 1080 NLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPEK 901
            +LIP   D PMDY   RPRIMDH+VT+EEIQKFFVDYMINDTLG ISTAHLVHADREP+K
Sbjct: 843  DLIPCQTDAPMDYTGSRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDK 902

Query: 900  ARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLYR 721
            ARS KCLELATLHSMAVDFAKTGAPAEMPR L+PRE+PDFM+R D+ MY S GVLGKLYR
Sbjct: 903  ARSEKCLELATLHSMAVDFAKTGAPAEMPRSLKPREFPDFMQRVDKPMYASLGVLGKLYR 962

Query: 720  ATLDR--KENSMELVGQ--GQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYGA 553
            AT++   +E S  +  +   +  YD DLE NGFE +L TA+ H++MY EK+  LM+YY  
Sbjct: 963  ATINSTVQERSKFVWSKKMAEALYDHDLEVNGFEAFLSTAQTHKDMYEEKMSFLMNYYEV 1022

Query: 552  ETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKMA 373
            E+E+E+LTGN+R+ + +LQ+D RRY DMKDRI+ S K LQ+EA+E F +SCK  EH+++A
Sbjct: 1023 ESEDEILTGNMRNKATFLQRDNRRYGDMKDRILLSMKNLQREARERFENSCKVGEHQRLA 1082

Query: 372  SAWYHVTYHPNYCADG-KNFLSFPWIFGDKLLDIK 271
            SAWYHVTYHPNYC +  K+ LSFPWI GD LL IK
Sbjct: 1083 SAWYHVTYHPNYCQESMKSCLSFPWIVGDILLKIK 1117


>ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
            gi|587928851|gb|EXC16034.1| RNA-dependent RNA polymerase
            2 [Morus notabilis]
          Length = 1115

 Score = 1265 bits (3273), Expect = 0.0
 Identities = 632/1038 (60%), Positives = 780/1038 (75%), Gaps = 4/1038 (0%)
 Frame = -3

Query: 3372 LSGKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQNDRFNVLESWKSVKVD 3193
            LS   +F+  NL I  +  +I+  P     R+  G L+ GF++++DR  VL+SW+ V+  
Sbjct: 73   LSNNFVFRSRNLGIFDTHDDIVALPVDPKLRLEDGVLHAGFMIRDDRMAVLQSWEGVRAW 132

Query: 3192 VLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISK 3013
             +PE++RVEFWV  + + YKL V F DV+ + GYCL               PKIY +IS+
Sbjct: 133  AMPERNRVEFWVWSDEDCYKLEVAFEDVLETVGYCLDDGKLYAFLLQLKYGPKIYKRISR 192

Query: 3012 PDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQLDERTSFSDIINSFPR 2833
            P    +   +RY I KE  EF WVRTT+F   KSIG S++  W   E    SD   SFP 
Sbjct: 193  PSKFVA---DRYHICKEDFEFHWVRTTDFLESKSIGHSTSLCWDAKEDFLSSDTFRSFPY 249

Query: 2832 YEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNSLVHAQKLSIPAVNSDV 2653
            Y    +   LE  ++ CS S+ VPLI+CP+ S LSYEILFQLNSLVH QK+S  + ++D+
Sbjct: 250  YREGMKDLILEDSDEFCSVSETVPLIKCPAGSNLSYEILFQLNSLVHMQKISFASADADL 309

Query: 2652 IEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGNKSHKPSSSERKLKNNEL 2473
            IE   SL++D+A  +++KL ++KST Y+ +S  +   H    N  + PSS+ ++L  N L
Sbjct: 310  IEYFGSLNIDTANAVIQKLHKLKSTCYDPLSLAKTYAHILEKNTKN-PSSAIKRLTENSL 368

Query: 2472 MSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFVEEDWGKLQSDAVTTSIE 2293
            MSCHRALITP+KIY +GPE+E+ NYVVK+F  + SDF+RVTFVEEDWGKL    V+TSIE
Sbjct: 369  MSCHRALITPSKIYCMGPELETSNYVVKNFAAYASDFLRVTFVEEDWGKLHPHVVSTSIE 428

Query: 2292 QGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRSSSVWMFASNDKISAKDI 2113
            QGIF+KPYRT IY RILS+L NGI+IG KR+EFLAFSASQLRSS+VWMFASND + A+DI
Sbjct: 429  QGIFAKPYRTGIYDRILSILRNGILIGAKRYEFLAFSASQLRSSAVWMFASNDNVKAEDI 488

Query: 2112 REWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPDIEATTDGIKYCFSDGIG 1933
            REWMGCFN IRSVSKCAARMGQLFSSS+Q L VP QD+E IPD+E TTDGI YCFSDGIG
Sbjct: 489  REWMGCFNKIRSVSKCAARMGQLFSSSRQTLIVPTQDLEIIPDVEVTTDGIDYCFSDGIG 548

Query: 1932 KISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFKSKNRML 1753
            KIS SFA+ VA+KC L+  P AFQIRYGGYKGV+ V+R+SFRKLSLR SM KF+S NRML
Sbjct: 549  KISSSFARQVAQKCGLKETPSAFQIRYGGYKGVIAVNRSSFRKLSLRSSMLKFESSNRML 608

Query: 1752 CITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLDQILTSREVAIRGLGGMN 1573
             +T  S  MPCYLNREIV+LLS+LG++DE F+AL + Q+ LL ++ T+RE A+  L  +N
Sbjct: 609  NVTKWSGSMPCYLNREIVSLLSSLGVKDESFLALLREQLLLLGKMRTNREAALNVLENLN 668

Query: 1572 AGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRSRIFVPKGRLLIGCLDET 1393
              +   IL++MLLQGYEP++EPYL MM++ Y + QLSD+++R RIFVPKG++LIGCLDET
Sbjct: 669  GSDSSNILVKMLLQGYEPNAEPYLSMMIQSYYENQLSDLKTRCRIFVPKGKVLIGCLDET 728

Query: 1392 ATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAV 1213
              L+YGQ YVR+T+   EL+ G+Q FF  V D+T+IVVGKVVVTKNPCLHPGD+RVL AV
Sbjct: 729  GILEYGQVYVRLTMKKAELEAGNQSFFRKVDDETSIVVGKVVVTKNPCLHPGDVRVLEAV 788

Query: 1212 YEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLCNDTPMDYIAR 1033
            Y+  LE +GL DCLVFPQKGERPHPNECSGGDLDGDL+F+ WD NLIP     PMDYI R
Sbjct: 789  YDAKLEEEGLVDCLVFPQKGERPHPNECSGGDLDGDLFFISWDTNLIPPRTTAPMDYIGR 848

Query: 1032 RPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPEKARSSKCLELATLHSMA 853
            RPRIMDHDVT+EEIQKFFVDYMINDTLG ISTAHL+HADREPEKA S  CL+LATLHSMA
Sbjct: 849  RPRIMDHDVTLEEIQKFFVDYMINDTLGGISTAHLIHADREPEKAFSENCLQLATLHSMA 908

Query: 852  VDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLYRATLD-RKENSMELVGQ 676
            VDFAKTGAPAEMPR LRPR+YPDFMER DR MY S+G LGKLYRAT++   + S  LV  
Sbjct: 909  VDFAKTGAPAEMPRALRPRDYPDFMERLDRPMYVSNGALGKLYRATVESESQGSSNLVWS 968

Query: 675  ---GQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYGAETEEEMLTGNLRDLSA 505
                +  YD DLE NGFE+++  AE HR+MY +K+  +M+YY  E+E+E+LTGNLR  +A
Sbjct: 969  EKTAEAAYDRDLEVNGFEEFIALAESHRDMYIDKMNGIMNYYELESEDEVLTGNLRKRAA 1028

Query: 504  YLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKMASAWYHVTYHPNYCADG 325
            YLQ+D RRY ++KDRI+ + K+LQ+EAK WF  SC+  E +KMASAWYHVTYHPNY    
Sbjct: 1029 YLQRDNRRYFEVKDRILLAVKSLQREAKGWFEGSCEAMEQQKMASAWYHVTYHPNYYQKS 1088

Query: 324  KNFLSFPWIFGDKLLDIK 271
             N LSFPWI GD LL+IK
Sbjct: 1089 INCLSFPWIKGDILLNIK 1106


>emb|CDP19325.1| unnamed protein product [Coffea canephora]
          Length = 1120

 Score = 1263 bits (3269), Expect = 0.0
 Identities = 636/1054 (60%), Positives = 782/1054 (74%), Gaps = 6/1054 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQFET+++      LS  GKL F+G +L++S S  E+I RP  S  R+  G L  G L++
Sbjct: 58   VQFETLEAKIKCLSLSEKGKLFFKGSHLRLSHSIDEVIFRPVDSKLRIKNGVLRTGILLR 117

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
            ND  +VLE W  VKV ++PE++ +EFW+   GE YKL VQFGDV+ S G CL        
Sbjct: 118  NDCMSVLERWDGVKVWIMPERNILEFWLSHGGECYKLEVQFGDVLESCGCCLDDQNPNAV 177

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                  APKIY K S P+  A    +RY   KE  +F+WVRTT+FSS+KSIG SS+   +
Sbjct: 178  LLKLKHAPKIYQKFSGPNVAAKFSADRYHTCKEDFDFIWVRTTDFSSIKSIGYSSSLCLE 237

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNS 2701
            ++E  S  D+  + P         +LE  EQ  + S+LVPL++C SD K++YEILFQLNS
Sbjct: 238  IEEGLSGLDLFTNLPYCSRFFLELTLEEGEQFSTTSELVPLVKCCSDIKITYEILFQLNS 297

Query: 2700 LVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGNK 2521
            LVH QKLS+ AVNS+++E+LS L +D A  IL+K+ ++++  Y+ +SFI  +LH    N 
Sbjct: 298  LVHTQKLSLGAVNSELMEVLSGLDMDIAMPILQKMHKLETMCYDPVSFINKRLHVMGENA 357

Query: 2520 SHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFVE 2341
            S+  SSS  + KNN +M+CHR L+TP+K+Y LGPE+E+ NY+VK+F  + SDF+RVTFVE
Sbjct: 358  SNLRSSSYGRPKNNNMMTCHRVLVTPSKVYCLGPELETSNYIVKNFASYASDFLRVTFVE 417

Query: 2340 EDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRSS 2161
            EDWGKL    V TS  +G+F+K Y+T+IYHRILS+L +GIVIG KRF FLAFSASQLRS+
Sbjct: 418  EDWGKLSPSVVNTSFGRGLFAKNYKTNIYHRILSILKDGIVIGEKRFLFLAFSASQLRSN 477

Query: 2160 SVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPDI 1981
            SVWMFASN+ + A+DIR+WMGCFN IRSVSKCAARMGQLFSSS Q L VPPQ VE IPDI
Sbjct: 478  SVWMFASNENLRAEDIRDWMGCFNKIRSVSKCAARMGQLFSSSLQTLEVPPQQVEVIPDI 537

Query: 1980 EATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRKL 1801
            E TTDG  +CFSDGIGKIS  FA+ VA+KC L + P AFQIRYGGYKGV+ VDR SFRKL
Sbjct: 538  EMTTDGENHCFSDGIGKISQGFARQVAQKCGLNYTPSAFQIRYGGYKGVIAVDRYSFRKL 597

Query: 1800 SLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLDQ 1621
            SLR SM KF+SKNRML +T  S+ MPCYLNREI+TLLSTLG+ED+ F+A+Q  Q+HLLD+
Sbjct: 598  SLRSSMLKFESKNRMLNVTKWSEAMPCYLNREIITLLSTLGVEDQVFLAMQYEQLHLLDK 657

Query: 1620 ILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRSR 1441
            +LT RE A+  L  M   E K I+++ML QG+EP  EPYL M+L+ +R+ QLSD+RSR R
Sbjct: 658  MLTHREAALDVLASMGVNETKSIVVRMLRQGFEPEIEPYLSMILQSHRENQLSDLRSRCR 717

Query: 1440 IFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVVT 1261
            IFVPKGR+L+GCLDET  LDYGQ Y+R+T+T  ELQ G Q FF  V + TAIV GKVVVT
Sbjct: 718  IFVPKGRVLLGCLDETGILDYGQVYIRITMTKTELQIGEQCFFQKVDETTAIVKGKVVVT 777

Query: 1260 KNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDE 1081
            KNPCLHPGD+RVL AVYE  L+ +G+ DC++FP KG RPHPNECSGGDLDGDLYFV WDE
Sbjct: 778  KNPCLHPGDVRVLEAVYEFSLQERGMVDCILFPLKGVRPHPNECSGGDLDGDLYFVSWDE 837

Query: 1080 NLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPEK 901
            NLIP    TPMDYI RR RI+DHDVT+EEIQ FFV YMI+DTLG ISTAHL+HADREP+K
Sbjct: 838  NLIPFQTVTPMDYIDRRKRIVDHDVTLEEIQSFFVGYMISDTLGTISTAHLIHADREPDK 897

Query: 900  ARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLYR 721
            A S KCL+LATLHSMAVDFAKTG PAEMPR L+PRE+PDFMER D+ MY S G LGKLYR
Sbjct: 898  ALSPKCLQLATLHSMAVDFAKTGTPAEMPRFLKPREFPDFMERWDKPMYTSQGALGKLYR 957

Query: 720  ATL-DRKENSMELVGQG---QYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYGA 553
            AT+  R       V      Q  YD +L  +G+E +L TA+ H+ MY +K+  L+ YYGA
Sbjct: 958  ATIASRVPGKSSFVFSAKIVQDAYDDELLIDGYEYFLGTAQCHKEMYVDKISTLLTYYGA 1017

Query: 552  ETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKMA 373
            ETEEE+LTGNLR+ S YLQ+D RRY ++KDRI+ + K+LQKEA+ WF SSC+  E  K+A
Sbjct: 1018 ETEEEILTGNLRNKSMYLQRDNRRYFELKDRILVAIKSLQKEARSWFESSCRAAEQMKLA 1077

Query: 372  SAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            SAWYHVTYHP Y       L FPWI GD LLDIK
Sbjct: 1078 SAWYHVTYHPTYSEGSAKCLGFPWIVGDILLDIK 1111


>ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
          Length = 1117

 Score = 1255 bits (3247), Expect = 0.0
 Identities = 620/1054 (58%), Positives = 785/1054 (74%), Gaps = 6/1054 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQF T+++      LS    L+F   NL+ S    +I+VRP  + NR   G L+VGF+++
Sbjct: 56   VQFTTLEAKAKAMALSVQNNLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLK 115

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
             +R +VLESW+ VK  ++PE+ R+EFW+    E YKL V F +++ + GYCLG       
Sbjct: 116  EERMSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGYCLGEEKLNAL 175

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                  AP+IY KIS  +  +   + RY +  E  ++LWVRTTEFS ++S+G+S++F W+
Sbjct: 176  LFKLKYAPRIYKKISGSNMASKFSSTRYRLCVEDYDYLWVRTTEFSPMRSVGQSTSFCWE 235

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNS 2701
            ++E    SDI + FP Y+   +   LE  E+ CS S++VPLI+    S L+YE+ +QLNS
Sbjct: 236  VEEDLQASDIFSYFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNS 295

Query: 2700 LVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGNK 2521
            LVH QK+S+ A N D+I+ L +L +D+A  +L++L Q+K   Y+ +SF++ QLH    N 
Sbjct: 296  LVHMQKISLAAANQDLIDFLCTLDIDTALNVLQRLHQLKFICYDPLSFLKTQLHVFKRNC 355

Query: 2520 SHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFVE 2341
               P SS+++L NN +M+C+R L+TP++IY LGPE+E+ NYVVK+F  + SDFMRVTFVE
Sbjct: 356  KSLPLSSQKRLSNN-VMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVE 414

Query: 2340 EDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRSS 2161
            EDW KL + AVTTSI++GI SKPYRT+IYHRI+++L +GIVIG KRFEFLAFSASQLRS+
Sbjct: 415  EDWSKLPAGAVTTSIQRGILSKPYRTNIYHRIVTILRDGIVIGAKRFEFLAFSASQLRSN 474

Query: 2160 SVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPDI 1981
            SVWMFAS+D + A++IR+WMGCF  IRS+SKCAARMGQLFSSS Q L VP QDVE IPDI
Sbjct: 475  SVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDI 534

Query: 1980 EATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRKL 1801
            E  +DGI YCFSDGIGKISLSFA+ VA KC + HIP AFQIRYGGYKGV+ VDRNSFRKL
Sbjct: 535  EVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKL 594

Query: 1800 SLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLDQ 1621
            SLR+SM KF+SKN+ML +T C   MPCYLNREIVTLLSTLG++DE F ALQQ Q+HLL +
Sbjct: 595  SLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIVTLLSTLGVKDESFEALQQEQLHLLKR 654

Query: 1620 ILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRSR 1441
            +LT + VA+  L  ++  +   IL+QML  GYEP+ EPYL MML+ +     SD+RSR R
Sbjct: 655  MLTDKAVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCR 714

Query: 1440 IFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVVT 1261
            IFVPKGR+L+GCLDET  L+YGQ Y  +TLT  ELQ  +Q +FH + +  +I++GKVVVT
Sbjct: 715  IFVPKGRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILIGKVVVT 774

Query: 1260 KNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDE 1081
            KNPCLHPGD+RVL A++   LE KGL DCL+FPQKG RPH NECSGGDLDGDLYF+ WDE
Sbjct: 775  KNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGPRPHTNECSGGDLDGDLYFISWDE 834

Query: 1080 NLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPEK 901
            NLIP   + PMDY  RRPRIMDHDVT+EEIQKFFVDYMINDTLG ISTAHLVHADREP+K
Sbjct: 835  NLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKK 894

Query: 900  ARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLYR 721
            A S+KCLELA LHSMAVDFAKTGAPAEMPRVL+PRE+PDFMER D+ MY SS VLGKLYR
Sbjct: 895  ALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYR 954

Query: 720  ATLDRKENSMELV----GQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYGA 553
            A +   E     +       +  YD DLE +GFE +LE AE ++ MY EK+  LM+YYGA
Sbjct: 955  AAIKSIEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGA 1014

Query: 552  ETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKMA 373
            E E+E+L G+LR  ++YLQ+D R+Y DMKDRI+ S K+L+KE KEWF +SC  H+ + MA
Sbjct: 1015 EYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKSLRKEVKEWFENSCDPHQRRMMA 1074

Query: 372  SAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            SAWYHVTYHP+Y  +   + SFPW   D LL+IK
Sbjct: 1075 SAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIK 1108


>gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sinensis]
          Length = 1131

 Score = 1254 bits (3245), Expect = 0.0
 Identities = 631/1072 (58%), Positives = 802/1072 (74%), Gaps = 24/1072 (2%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQF ++D  +   +LS   KL+F   NLKIS +  +I+ RP ++ +RV  G L+VG + +
Sbjct: 53   VQFTSLDFKSKAQNLSLNDKLVFNSQNLKISETHSDIVPRPVKAQHRVEDGVLHVGVMCK 112

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWV--VENGE---------------TYKLVVQFGD 3112
             +R  VL++++ V+  +LP++ R+EFWV    NGE                +K+ + F D
Sbjct: 113  EERLRVLQTFEGVRGWLLPDRRRLEFWVWPKHNGEWQKGIQECQSDSSDCCFKVEILFED 172

Query: 3111 VISSAGYCLGXXXXXXXXXXXXXA-PKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRT 2935
            V+ + G+ L                PKIY K+S P   +   ++RY I KE  +F WVRT
Sbjct: 173  VLETVGFSLDEGATVNGILFKLKYGPKIYQKVSGPHVASKFPSDRYHICKEDFDFFWVRT 232

Query: 2934 TEFSSLKSIGKSSAFVWQLDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLI 2755
            T+FS  KSIG S++F W++      SDI N FP Y+ +     LE  E+ C+ S++VPL+
Sbjct: 233  TDFSVTKSIGCSTSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTTSEIVPLV 292

Query: 2754 RCPSDSKLSYEILFQLNSLVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTY 2575
            +C     LS+E+LFQLNSLVH QK+S+ A ++++I+ILS LS+++A  +L+KL ++KS  
Sbjct: 293  KCRPGFNLSHEVLFQLNSLVHNQKVSLVAADAELIQILSGLSMETALMVLQKLHKLKSIC 352

Query: 2574 YEVISFIQCQLHTSVGNKSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYV 2395
            Y+ +SF++ QLH    N    P SS ++L ++ +MSC+RAL+TP KIY LGPE+E+ NYV
Sbjct: 353  YDPVSFVKTQLHVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPELETSNYV 412

Query: 2394 VKHFEEHVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVI 2215
            VK+F ++ SDFMRVTFVEEDW KL ++A++TSI++GIFSKPYRT IY RIL++L +GIVI
Sbjct: 413  VKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFSKPYRTKIYSRILTILQDGIVI 472

Query: 2214 GTKRFEFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSS 2035
            G K +EFLAFSASQLR++SVWMFASND++SA+D+R WMGCFN IRSVSKCAARMGQLFSS
Sbjct: 473  GDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVRGWMGCFNKIRSVSKCAARMGQLFSS 532

Query: 2034 SKQVLNVPPQDVENIPDIEATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIR 1855
            SKQ L VP QDVE IPD+E T+DG  YCFSDGIGKISLSFA+ VA+KC L H P AFQIR
Sbjct: 533  SKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIR 592

Query: 1854 YGGYKGVLVVDRNSFRKLSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGI 1675
            YGGYKGV+ VDRNSFRKLSLR SM KF+S+NRML +T  S+ MPC+LNREI++LLSTLG+
Sbjct: 593  YGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISLLSTLGV 652

Query: 1674 EDEKFIALQQAQIHLLDQILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFM 1495
            +DE F A+QQ Q+ LL ++L +RE A+  L  +N  + K IL++MLLQGYEP+ EPYL M
Sbjct: 653  KDEVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPNVEPYLSM 712

Query: 1494 MLKEYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPF 1315
            ML  + + QLSD++SR RI+VPKGRLLIGC DET  L+YGQ +VRVT+T EEL+   Q F
Sbjct: 713  MLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELESKDQSF 772

Query: 1314 FHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPN 1135
            FH V DKT+IV GKV+VTKNPCLHPGD+RVL AVYE  LE K   DC++FPQKGERPHPN
Sbjct: 773  FHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPN 832

Query: 1134 ECSGGDLDGDLYFVCWDENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDT 955
            ECSGGDLDGD++F+ WD +LIP   + PMDY  RR RIMDHDVT+EEI KFFVDYMINDT
Sbjct: 833  ECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDT 892

Query: 954  LGMISTAHLVHADREPEKARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFME 775
            LG ISTAHLVHADR+P+KARSSKCL LATLHSMAVDFAKTGAPAEMP  L+P+E+PDFME
Sbjct: 893  LGAISTAHLVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFME 952

Query: 774  REDRAMYPSSGVLGKLYRATLDR----KENSMELVGQGQYTYDADLEENGFEKYLETAEG 607
            RED+  Y S GVLGKLYRATLD     + N++      + +YD DLE +GFE +L  AE 
Sbjct: 953  REDKPRYISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAES 1012

Query: 606  HRNMYAEKLICLMDYYGAETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKE 427
            H+ MY E++  LM+YYGA TE+E+LTGNLR+ ++YLQ+D RRY DMKDRI+ S K LQ E
Sbjct: 1013 HKEMYEEEMNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNE 1072

Query: 426  AKEWFHSSCKNHEHKKMASAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            AKEWF SSCK +EH ++ASAWYHVTY P+YC +    LSFPWI GD LL+IK
Sbjct: 1073 AKEWFGSSCKENEHPQLASAWYHVTYSPSYCKERMALLSFPWIVGDILLNIK 1124


>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
            gi|462407047|gb|EMJ12511.1| hypothetical protein
            PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score = 1253 bits (3243), Expect = 0.0
 Identities = 625/1055 (59%), Positives = 787/1055 (74%), Gaps = 7/1055 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQF T+++ +    LS    L+F+  +L++S ++ +II RP     R+ G  L+ GF+V+
Sbjct: 56   VQFTTLEAKSEAYSLSLQNGLVFKSESLRLSETYDDIIQRPVDPKRRLNGTVLHAGFMVK 115

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
             D  ++LESW+ V+  V+PE+ RVEFWV    E YKL + F +++ S G  LG       
Sbjct: 116  GDCMSMLESWEGVRAWVMPERKRVEFWVWLRDECYKLEIAFENIMESFGCRLGGEKVNAL 175

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                   P+I+ KIS P+  A    +RY + K+  +FLWVRTT+FS +KSIG S++F W+
Sbjct: 176  LLKLKFGPRIFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWE 235

Query: 2880 LDERTSFSDIINSFPRYEGESRI-FSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLN 2704
            ++E  S SD+   FP Y+    +   L+  E+ CS S+ VPL++C SDSKL YEILFQLN
Sbjct: 236  IEEEFSVSDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLVKCRSDSKLPYEILFQLN 295

Query: 2703 SLVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGN 2524
            +LVH+QK+S+ A +SD+IE LS LS+D+   +L KL + K+T Y+ +SF++ QLH    N
Sbjct: 296  ALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTCYDPLSFLKMQLHVLERN 355

Query: 2523 KSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFV 2344
               +PS  +R +++N +MSCHR LITP+KI  LGPE+E  NYVVK+F  + SDFMRVTFV
Sbjct: 356  HKSRPSPYKRLMEHN-VMSCHRVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFV 414

Query: 2343 EEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRS 2164
            +EDW KL ++A++TSI+QGIF+KP+RT IYHR+LS+L +GIVIG KRFEFLAFSASQLRS
Sbjct: 415  DEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIGEKRFEFLAFSASQLRS 474

Query: 2163 SSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPD 1984
            SSVWMF+SND + A+DIREWMGCF+ IRS+SKCAARMGQLFSSS Q L VP QDVE IPD
Sbjct: 475  SSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPD 534

Query: 1983 IEATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRK 1804
            +E ++DG+ YCFSDGIGKISLSFA+ VA+KC L+  P AFQIRYGGYKGV+ VD  SFRK
Sbjct: 535  VETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRK 594

Query: 1803 LSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLD 1624
            LSLR SM KF+SKNRML +T  S  MPCYLNREI++LLSTLG++DE F ALQ+ Q+ LL 
Sbjct: 595  LSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVKDETFEALQEEQLRLLG 654

Query: 1623 QILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRS 1444
            ++ T R  A+     +N  + K  L++MLL GYEP++EPYL MML+ Y +  LSD++SR 
Sbjct: 655  KMRTERGAALNVFERLNGADSKNTLVKMLLHGYEPNAEPYLSMMLQAYYENHLSDLKSRC 714

Query: 1443 RIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVV 1264
            RIFVPKGR+L+GCLDET  LDYGQ YVR+T+T  E + G Q FF  V + T +V GKVVV
Sbjct: 715  RIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKVDETTLVVTGKVVV 774

Query: 1263 TKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWD 1084
            TKNPCLHPGD+RVL+AVY+ +LE K + DCL+FPQKGERPHPNECSGGDLDGDL+F+ WD
Sbjct: 775  TKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWD 834

Query: 1083 ENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPE 904
            ++L+P     PMDY ARRPRIMDH VT+EEIQKFFVDYMIND LG ISTAHLVHAD EP+
Sbjct: 835  KDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPD 894

Query: 903  KARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLY 724
            KA + KCL+LA LHSMAVDFAKTGAPAEM R L+P+E+PDFMER D+ MY S+G LGKLY
Sbjct: 895  KALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLY 954

Query: 723  RA----TLDRKENSMELVGQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYG 556
            RA     L  K N +      +  YD DLE +G E  LE A+GHR+MY EK+  +M+YYG
Sbjct: 955  RAVVGSVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYG 1014

Query: 555  AETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKM 376
            A TE+E+LTGNLR+ +AYLQ+D RRY DMKDRI  S K LQKEAK  F SSC   EH++M
Sbjct: 1015 AVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGLFESSCPVSEHQRM 1074

Query: 375  ASAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            ASAWYHVTYHP+Y     N LSFPWI GD LL+IK
Sbjct: 1075 ASAWYHVTYHPSYFQQDMNCLSFPWIVGDILLNIK 1109


>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
          Length = 1131

 Score = 1251 bits (3238), Expect = 0.0
 Identities = 628/1072 (58%), Positives = 802/1072 (74%), Gaps = 24/1072 (2%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQF ++D  +   +LS   KL+F   NLKIS +  +I+ RP ++ +RV  G L+VG + +
Sbjct: 53   VQFTSLDFKSKAQNLSLNDKLVFNSQNLKISETHSDIVPRPVKAQHRVEDGVLHVGVMCK 112

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWV--VENGE---------------TYKLVVQFGD 3112
             +R  VL++++ V+  +LP++ R+EFWV    NGE                +K+ + F D
Sbjct: 113  EERLRVLQTFEGVRGWLLPDRRRLEFWVWPKHNGEWQKGIQECQSDSSDCCFKVEILFED 172

Query: 3111 VISSAGYCLGXXXXXXXXXXXXXA-PKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRT 2935
            V+ + G+ L                PKIY K+S P   +   ++RY I KE  +F WVRT
Sbjct: 173  VLETVGFSLDEGATVNGILFKLKYGPKIYQKVSGPHVASKFPSDRYHICKEDFDFFWVRT 232

Query: 2934 TEFSSLKSIGKSSAFVWQLDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLI 2755
            T+FS  KSIG S++F W++      SDI N FP Y+ +     LE  E+ C+ S++VPL+
Sbjct: 233  TDFSVTKSIGCSTSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTTSEIVPLV 292

Query: 2754 RCPSDSKLSYEILFQLNSLVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTY 2575
            +C     LS+E+LFQLNSLVH QK+S+ A ++++I+IL+ LS+++A  +L+KL ++KS  
Sbjct: 293  KCRPGFNLSHEVLFQLNSLVHNQKVSLVAADAELIQILNGLSMETALMVLQKLHKLKSIC 352

Query: 2574 YEVISFIQCQLHTSVGNKSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYV 2395
            Y+ +SF++ QLH    N    P SS ++L ++ +MSC+RAL+TP KIY LGPE+E+ NYV
Sbjct: 353  YDPVSFVKTQLHVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPELETSNYV 412

Query: 2394 VKHFEEHVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVI 2215
            VK+F ++ SDFMRVTFVEEDW KL ++A++TSI++GIF+KPYRT IY RIL++L +GIVI
Sbjct: 413  VKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFAKPYRTKIYSRILTILQDGIVI 472

Query: 2214 GTKRFEFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSS 2035
            G K +EFLAFSASQLR++SVWMFASND++SA+D+REWMGCFN I SVSKCAARMGQLFSS
Sbjct: 473  GDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAARMGQLFSS 532

Query: 2034 SKQVLNVPPQDVENIPDIEATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIR 1855
            SKQ L VP QDVE IPD+E T+DG  YCFSDGIGKISLSFA+ VA+KC L H P AFQIR
Sbjct: 533  SKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIR 592

Query: 1854 YGGYKGVLVVDRNSFRKLSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGI 1675
            YGGYKGV+ VDRNSFRKLSLR SM KF+S+NRML +T  S+ MPC+LNREI++LLSTLG+
Sbjct: 593  YGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISLLSTLGV 652

Query: 1674 EDEKFIALQQAQIHLLDQILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFM 1495
            +D+ F A+QQ Q+ LL ++L +RE A+  L  +N  + K IL++MLLQGYEP+ EPYL M
Sbjct: 653  KDDVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPNVEPYLSM 712

Query: 1494 MLKEYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPF 1315
            ML  + + QLSD++SR RI+VPKGRLLIGC DET  L+YGQ +VRVT+T EEL+   Q F
Sbjct: 713  MLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELESKDQSF 772

Query: 1314 FHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPN 1135
            FH V DKT+IV GKV+VTKNPCLHPGD+RVL AVYE  LE K   DC++FPQKGERPHPN
Sbjct: 773  FHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPN 832

Query: 1134 ECSGGDLDGDLYFVCWDENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDT 955
            ECSGGDLDGD++F+ WD +LIP   + PMDY  RR RIMDHDVT+EEI KFFVDYMINDT
Sbjct: 833  ECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDT 892

Query: 954  LGMISTAHLVHADREPEKARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFME 775
            LG ISTAHLVHADR+P+KARSSKCL LATLHSMAVDFAKTGAPAEMP  L+P+E+PDFME
Sbjct: 893  LGAISTAHLVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFME 952

Query: 774  REDRAMYPSSGVLGKLYRATLDR----KENSMELVGQGQYTYDADLEENGFEKYLETAEG 607
            RED+  Y S GVLGKLYRATLD     + N++      + +YD DLE +GFE +L  AE 
Sbjct: 953  REDKPRYISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAES 1012

Query: 606  HRNMYAEKLICLMDYYGAETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKE 427
            H+ MY E++  LM+YYGA TE+E+LTGNLR+ ++YLQ+D RRY DMKDRI+ S K LQ E
Sbjct: 1013 HKEMYEEEMNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNE 1072

Query: 426  AKEWFHSSCKNHEHKKMASAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            AKEWF SSCK +EH ++ASAWYHVTY P+YC +    LSFPWI GD LL+IK
Sbjct: 1073 AKEWFGSSCKENEHPQLASAWYHVTYSPSYCKERMALLSFPWIVGDILLNIK 1124


>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| hypothetical protein
            POPTR_0015s08500g [Populus trichocarpa]
          Length = 1110

 Score = 1246 bits (3225), Expect = 0.0
 Identities = 630/1055 (59%), Positives = 780/1055 (73%), Gaps = 7/1055 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQF +++  +    LS   KL+ +  NLK+S ++ +II RP +  NR+  G L VGF+ +
Sbjct: 57   VQFSSLEVKHEALSLSLKNKLVLKSQNLKLSETYDDIIPRPVKDQNRMENGVLYVGFMKK 116

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGE-TYKLVVQFGDVISSAGYCLGXXXXXX 3064
                 VLE W+ V+   +PE+ R+EFW+    E  YKLVV+F D++ + GY L       
Sbjct: 117  ETTLCVLEYWEGVRGWFMPERRRIEFWIRVGQEFRYKLVVEFEDILEAVGYPLDGDKVNA 176

Query: 3063 XXXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVW 2884
                    P+IY KIS P   +    NRY   KE  +FLWVRTT+ S++KSIG+S++F W
Sbjct: 177  VVLKLRYGPRIYQKISGPGIASKFSTNRYFYCKEDFDFLWVRTTDISAIKSIGQSTSFCW 236

Query: 2883 QLDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLN 2704
            ++ E    SD   +FP Y+ +     LE  E+ CS S+ VPLIRC SD KL+YE+LFQLN
Sbjct: 237  EIGEGLEASDTFRNFPYYQEDMNRLDLEDGEEFCSASETVPLIRCGSD-KLAYEVLFQLN 295

Query: 2703 SLVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGN 2524
            SLVH QK+S+ AV+SD+I+IL +L++++A  IL+KL ++K T Y+ +SF++  L  S+  
Sbjct: 296  SLVHTQKISLAAVDSDLIKILRNLTVNTAIIILQKLHKLKMTCYDPLSFVKQSLRESL-- 353

Query: 2523 KSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFV 2344
                 SS  + L  N +MSCHRALITP+KI+ LGPE E+ NYVVKHF ++ SDF+RVTFV
Sbjct: 354  -----SSPPKSLTENNIMSCHRALITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFV 408

Query: 2343 EEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRS 2164
            EEDW KL ++A++TSI++GIF+KP+RT IYHRILS+L +G VIG KRFEFLAFSASQLRS
Sbjct: 409  EEDWSKLPANAISTSIQRGIFAKPFRTGIYHRILSILRDGFVIGAKRFEFLAFSASQLRS 468

Query: 2163 SSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPD 1984
            +SVWMFASN+ + A+DIR+WMGCF+ IRSVSKCAARMGQLFSSS Q   VP QDVE IPD
Sbjct: 469  NSVWMFASNNGVKAEDIRKWMGCFDKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPD 528

Query: 1983 IEATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRK 1804
            IE TTDGI YCFSDGIGKISLSFAK VA KC L H P AFQIRYGGYKGV+ VDRNSFRK
Sbjct: 529  IEVTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRK 588

Query: 1803 LSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLD 1624
            LSLR SM KF S+NRML +T  S+ MPCYLNREI++LLSTLG+ DE F ALQQ Q++ L 
Sbjct: 589  LSLRSSMLKFDSENRMLNVTKWSESMPCYLNREIISLLSTLGVADEIFQALQQKQLYRLR 648

Query: 1623 QILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRS 1444
            ++LT++E A+  L  +   + K IL+QMLLQGYEP+ EPYL MML+ Y +  L ++RSR 
Sbjct: 649  KMLTNKESALDVLENLAWADSKNILVQMLLQGYEPNVEPYLSMMLQAYHENSLMELRSRC 708

Query: 1443 RIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVV 1264
            RIFVPKGR+LIGCLDE+  LDYGQ YVR+T+T  ELQC  Q FF  V + T+ ++G+V V
Sbjct: 709  RIFVPKGRILIGCLDESGILDYGQVYVRITMTKAELQCCDQSFFRKVDESTSTIIGEVAV 768

Query: 1263 TKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWD 1084
            TKNPCLHPGDIRVL AVY+  LE KGL DC++FPQ G RPHPNECSGGDLDGD +F+ WD
Sbjct: 769  TKNPCLHPGDIRVLEAVYDVELEEKGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWD 828

Query: 1083 ENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPE 904
            E L+P   + PMDY+  R RIMDH+VT+EEIQ+FFVDYMINDTLG ISTAHLVHAD EP+
Sbjct: 829  EGLLPCHTEAPMDYVGGRQRIMDHNVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPD 888

Query: 903  KARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLY 724
            KARS KCL+LATLHSMAVDFAKTGAPAEMP  L+PRE+PDFMER ++ MY S GVLGKLY
Sbjct: 889  KARSEKCLQLATLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLY 948

Query: 723  R----ATLDRKENSMELVGQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYG 556
            R    +T   + N M      + TYD DLE  GFE +L  A  ++  Y EK+  LMDYYG
Sbjct: 949  RDIHDSTRQERSNFMWSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYG 1008

Query: 555  AETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKM 376
            A+TE+E+LTGNLR    YLQ+D R+Y D+KDRI+ S K L+KEAKEWF SSC   EH+ M
Sbjct: 1009 AKTEDEILTGNLRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSCNPTEHQCM 1068

Query: 375  ASAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            ASAWYHVTYHP Y  +  N LSFPWI GD LL+IK
Sbjct: 1069 ASAWYHVTYHPTYFHERMNCLSFPWIVGDILLNIK 1103


>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
          Length = 1119

 Score = 1245 bits (3221), Expect = 0.0
 Identities = 626/1054 (59%), Positives = 774/1054 (73%), Gaps = 6/1054 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQFET+        LS  G L+F+G  L +  SF +II RP +   R   G L+ G LV+
Sbjct: 58   VQFETLQDKLHCLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRFQDGILHTGLLVK 117

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
            ND   VLE+W+ VK  ++PE+  +EFWV    E Y+L VQFGDV+  A  C         
Sbjct: 118  NDVMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVVE-ATVCSLENQKSAL 176

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                  APK+Y ++S P   +    +RY I KE  EFLWVRTT+FS++KSIG SS+  W+
Sbjct: 177  LLKLKHAPKLYQRVSGPAVASKFSADRYHICKEDCEFLWVRTTDFSNIKSIGCSSSLCWE 236

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNS 2701
             ++    SD+++S P    +     L+ V    SGS+ VPL+R PSD KL YEILFQLNS
Sbjct: 237  TEDGWLSSDLLSSLPCCNKDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNS 296

Query: 2700 LVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGNK 2521
            LV  QK+S+ AVN D+IE+LS L LD+A  IL+K+ +++ST +E ++FI+ +LH    N 
Sbjct: 297  LVQTQKISLGAVNPDLIEVLSKLELDTAMMILQKMHKLQSTCFEPLTFIKTRLHVLGKNN 356

Query: 2520 SHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFVE 2341
             ++ SSS  +L N+ +MS HR L+TP+KIY LGPE+E+ NY+VK+F EH SDF+RVTFVE
Sbjct: 357  KNQLSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFAEHASDFLRVTFVE 416

Query: 2340 EDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRSS 2161
            EDWGKL  +AV+ S+EQGIF+KPYRT IYHRILS+L  GIVIGTKRF FLAFSASQLRS+
Sbjct: 417  EDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSN 476

Query: 2160 SVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPDI 1981
            SVWMFASN+ + A+DIREWMGCFN IRS+SKCAARMGQLFS+S Q + V  Q VE +PDI
Sbjct: 477  SVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVQLQHVEILPDI 536

Query: 1980 EATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRKL 1801
            E T+DG+ YCFSDGIGKIS +FA+ VA+KC L H P AFQIRYGGYKGV+ VDRNSFRKL
Sbjct: 537  EVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKL 596

Query: 1800 SLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLDQ 1621
            SLR SM KF+SKNRML IT  S  MPCYLNREIV LLSTLG+ED+    L    + LL +
Sbjct: 597  SLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKALEDLLDNHLRLLGK 656

Query: 1620 ILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRSR 1441
            +LT+ E A+  L  M  G++K+IL++MLLQGY P+ EPYL MML+ + + Q+SD+RSR R
Sbjct: 657  MLTTNEAALDVLESMGGGDVKKILMRMLLQGYAPNREPYLSMMLQSHFENQISDLRSRCR 716

Query: 1440 IFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVVT 1261
            IF+PKGR+L+GCLDET  L YG+ YVR+T+T  ELQ G Q FF  V + TA+V GKVVVT
Sbjct: 717  IFIPKGRILVGCLDETGILKYGEVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVT 776

Query: 1260 KNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDE 1081
            KNPCLHPGD+RVL AVYE  LE K   DC++FPQ GERPHPNECSGGDLDGDLYF+CWDE
Sbjct: 777  KNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQNGERPHPNECSGGDLDGDLYFICWDE 836

Query: 1080 NLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPEK 901
            +LIP    TPMDY  RRPRIMDH+VT+EEIQ+FFVDYMI+DTLG ISTAHLVHADREP+K
Sbjct: 837  SLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDK 896

Query: 900  ARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLYR 721
            A +SKCL+LATLHSMAVDFAKTGA AEMPR L+PRE+PDFMER D+ MY S GVLGKLYR
Sbjct: 897  ALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYR 956

Query: 720  ATLD----RKENSMELVGQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYGA 553
              +     R  + +      Q  YD DL   G+E ++ETA+ H+ MY + +  L++YYGA
Sbjct: 957  GVIKSYIRRNSDDLSTDRAIQDAYDHDLLVEGYEAFIETAKTHKEMYLDSMNSLLNYYGA 1016

Query: 552  ETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKMA 373
            E E E+LTGNLR  S YLQ+D RRY ++KDRI+ S K+L KE K WF   C   +H+K+ 
Sbjct: 1017 EKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFSGCCTEDDHQKLV 1076

Query: 372  SAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            SAWYHVTYHP+YC +  N L FPW+ GD LL+IK
Sbjct: 1077 SAWYHVTYHPSYCHESANCLGFPWVVGDILLNIK 1110


>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus] gi|700208501|gb|KGN63597.1|
            hypothetical protein Csa_1G005580 [Cucumis sativus]
          Length = 1117

 Score = 1245 bits (3221), Expect = 0.0
 Identities = 617/1054 (58%), Positives = 779/1054 (73%), Gaps = 6/1054 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQF T+++      LS    L+F   NL+ S    +I+VRP  + NR   G L+VGF+++
Sbjct: 56   VQFTTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLK 115

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
             +R +VLESW+ VK  ++PE+ R+EFW+    E YKL V F +++ + G+CLG       
Sbjct: 116  EERMSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNAL 175

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                  AP+IY KIS  +  +   + RY +  E  ++LWVRTTEFS ++S+G+S++F W+
Sbjct: 176  LLKLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWE 235

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNS 2701
            ++E    SDI + FP Y+   +   LE  E+ CS S++VPLI+    S L+YE+ +QLNS
Sbjct: 236  VEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNS 295

Query: 2700 LVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGNK 2521
            LVH QK+S+ A N D+I+ L +L +D+A  +L++L Q+K   Y+ +SF++ QLH    N 
Sbjct: 296  LVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNC 355

Query: 2520 SHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFVE 2341
               P SS+++L NN +M+C+R L+TP++IY LGPE+E+ NYVVK+F  + SDFMRVTFVE
Sbjct: 356  KSLPPSSQKRLSNN-VMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVE 414

Query: 2340 EDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRSS 2161
            EDW KL + AVTTSI++GI SKPYRT IYHRI++VL +GIVIG KRFEFLAFSASQLRS+
Sbjct: 415  EDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSN 474

Query: 2160 SVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPDI 1981
            SVWMFAS+D + A++IR+WMGCF  IRS+SKCAARMGQLFSSS Q L VP +DVE IPDI
Sbjct: 475  SVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDI 534

Query: 1980 EATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRKL 1801
            E  TDGI YCFSDGIGKISLSFA+ VA KC + HIP AFQIRYGGYKGV+ VDRNSFRKL
Sbjct: 535  EVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKL 594

Query: 1800 SLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLDQ 1621
            SLR+SM KF+SKN+ML +T C   MPCYLNREI TLLSTLG++DE F ALQQ Q+HLL +
Sbjct: 595  SLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKR 654

Query: 1620 ILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRSR 1441
            +LT ++VA+  L   +  +   IL+QML  GYEP+ EPYL MML+ +     SD+RSR R
Sbjct: 655  MLTDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCR 714

Query: 1440 IFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVVT 1261
            IFVPKGR+L+GCLDET  L+YGQ Y  +TLT  ELQ  +Q +FH + +  +I++GKVVVT
Sbjct: 715  IFVPKGRILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVVVT 774

Query: 1260 KNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDE 1081
            KNPCLHPGD+RVL A++   LE KGL DCL+FPQKG RPH NECSGGDLDGDLYF+ WDE
Sbjct: 775  KNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDE 834

Query: 1080 NLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPEK 901
            NLIP   + PMDY  RRPRIMDHDV +EEIQKFFVDYMINDTLG ISTAHLVHADREP+K
Sbjct: 835  NLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKK 894

Query: 900  ARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLYR 721
            A S+KCLELA LHSMAVDFAKTGAPAEMPRVL+PRE+PDFMER D+ MY SS VLGKLYR
Sbjct: 895  ALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYR 954

Query: 720  ATLDRKENSMELV----GQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYGA 553
            A +   E     +       +  YD DLE +GFE +LE AE ++ MY EK+  LM+YYGA
Sbjct: 955  AAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGA 1014

Query: 552  ETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKMA 373
            E E+E+L G+LR  ++YLQ+D R+Y DMKDRI+ S K L+KE KEWF +SC     + MA
Sbjct: 1015 EYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMA 1074

Query: 372  SAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            SAWYHVTYHP+Y  +   + SFPW   D LL+IK
Sbjct: 1075 SAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIK 1108


>ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
          Length = 1120

 Score = 1244 bits (3219), Expect = 0.0
 Identities = 628/1055 (59%), Positives = 780/1055 (73%), Gaps = 7/1055 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQFET  S      LS  GKLIF+G  L ++ SF +IIVRP +   R   G L+ G L++
Sbjct: 58   VQFETSQSKLQALSLSEQGKLIFKGHQLILTSSFDDIIVRPIEPNYRFQKGILHTGVLLK 117

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWV-VENGETYKLVVQFGDVISSAGYCLGXXXXXX 3064
            ND   VLE+W++VK  ++PE+  +EFWV    GE Y+L VQFGD+I + G C        
Sbjct: 118  NDYMEVLETWENVKTLIMPERKSLEFWVSYAKGECYRLEVQFGDIIETCG-CSLEDEKPA 176

Query: 3063 XXXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVW 2884
                   APK+Y ++S P   +   ++RY + KE  EFLWVRTT+FS++KSIG SS+  W
Sbjct: 177  LLLKLKHAPKLYQRVSGPGVASKFSSDRYHVCKEDCEFLWVRTTDFSAMKSIGCSSSLCW 236

Query: 2883 QLDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLN 2704
            ++++    SD+++S P    +     L+ V    S S+LVPL   PSD KL YEILFQLN
Sbjct: 237  EIEDGLLNSDLLSSLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLN 296

Query: 2703 SLVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGN 2524
            SLVH+ K+S+ AV +D+IE+LS L LD+A  IL+K+ +++ST +E + FI+ +LH     
Sbjct: 297  SLVHSHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGKT 356

Query: 2523 KSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFV 2344
              ++PSSS  +L N  +MS HR L+TP+K+Y LGPE+E+ NY+VK+F  H SDF+RVTFV
Sbjct: 357  SKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFASHASDFLRVTFV 416

Query: 2343 EEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRS 2164
            EEDW KL  +A++ S+EQGIF+KPYRT IYHRILS+L +G+ IGTK+F FLAFSASQLRS
Sbjct: 417  EEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSILRDGLDIGTKKFLFLAFSASQLRS 476

Query: 2163 SSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPD 1984
            +SVWMFASN+ + A+DIREWMGCFN IRSVSKCAARMGQLFS+S Q + V    VE +PD
Sbjct: 477  NSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPD 536

Query: 1983 IEATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRK 1804
            IE T+DG+ YCFSDGIGKIS +FA  VA+KC L + P AFQIRYGGYKGV+ VDRNSFRK
Sbjct: 537  IEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRK 596

Query: 1803 LSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLD 1624
            LSLR SM KF+SKNRML IT  S  MPCYLNREIV LLSTLG+ED+    L    +HLL 
Sbjct: 597  LSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVLEDLLDNHLHLLG 656

Query: 1623 QILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRS 1444
            ++LT+ E A+  L  +  G++KRIL++ML QGY P+ EPYL MML+ + + QLSD+RSR 
Sbjct: 657  KMLTTNEAALDVLESIGGGDVKRILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRC 716

Query: 1443 RIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVV 1264
            RIF+PKGR+L+GCLDET  L+YGQ Y R+T+T  ELQ G Q FF  V + TA+V GKVVV
Sbjct: 717  RIFIPKGRVLVGCLDETGILNYGQVYARITMTKAELQSGQQNFFQQVDETTAVVRGKVVV 776

Query: 1263 TKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWD 1084
            TKNPCLHPGD+RVL AVYE  LE K   DC++FPQKGERPHPNECSGGDLDGDLYF+ W 
Sbjct: 777  TKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWA 836

Query: 1083 ENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPE 904
            ENLIP    TPMDY  RRPRIMDH+VT+EEIQ+FFVDYMI+DTLG ISTAHLVHADREP+
Sbjct: 837  ENLIPRQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPD 896

Query: 903  KARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLY 724
            KA + KCL+LATLHSMAVDFAKTGA AEMPR L+PRE+PDF+ER D+ MY S GVLGKLY
Sbjct: 897  KALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLY 956

Query: 723  RATLDR--KENSMEL--VGQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYG 556
            RA +    + NS +L  V   Q  YD DL   G+E ++ETA+ H+ MY +++  L++YYG
Sbjct: 957  RAIVKSSVRGNSDDLGSVRAIQDAYDHDLLFEGYEAFIETAKNHKEMYLDRMNSLLNYYG 1016

Query: 555  AETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKM 376
            AE E E+LTGNLR  S YLQ+D RRY ++KDRI+ S K+LQKE K WF   CK  EHKK+
Sbjct: 1017 AEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGYCKEDEHKKL 1076

Query: 375  ASAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            ASAWYHVTYHP+YC    N L FPW+ GD LLDIK
Sbjct: 1077 ASAWYHVTYHPSYCEGSANCLGFPWVVGDILLDIK 1111


>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [Solanum lycopersicum]
          Length = 1119

 Score = 1243 bits (3216), Expect = 0.0
 Identities = 625/1054 (59%), Positives = 777/1054 (73%), Gaps = 6/1054 (0%)
 Frame = -3

Query: 3414 VQFETI-DSVNTINHLS-GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQFET+ D ++ ++    G L+F+G  L +  SF +II RP +   R   G L+ G LV+
Sbjct: 58   VQFETLQDKLHCLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAGILHTGLLVE 117

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
             D   VLE+W+ VK  ++PE+  +EFWV    E Y+L VQFGDV      C         
Sbjct: 118  KDVMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGT-LCSVENQKSAL 176

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                  APK+Y ++S P   +    +RY I KE  EFLW+RTT+FS++KSIG SS+  W+
Sbjct: 177  LLKLKHAPKLYQRVSGPAVASKFSADRYHICKEDCEFLWIRTTDFSNIKSIGCSSSLCWE 236

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNS 2701
             ++    SD+ +S P    +     L+ V    SGS+ VPL+R PSD KL YEILFQLNS
Sbjct: 237  TEDGWLSSDLFSSLPCCNQDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNS 296

Query: 2700 LVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGNK 2521
            LV  QK+S+ A+N ++IE+LS L LD+A  IL+K+ +++S  ++ + FI+ +LH    N 
Sbjct: 297  LVQTQKISLGAINPNLIEVLSKLELDTAMMILQKMHKLQSICFDPLLFIKTRLHVLGKNN 356

Query: 2520 SHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFVE 2341
             ++PSSS  +L N+ +MS HR L+TP+KIY LGPE+E+ NY+VK+F  H SDF+RVTFVE
Sbjct: 357  KNRPSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFASHASDFLRVTFVE 416

Query: 2340 EDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRSS 2161
            EDWGKL  +AV+ S+EQGIF+KPYRT IYHRILS+L  GIVIGTKRF FLAFSASQLRS+
Sbjct: 417  EDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSN 476

Query: 2160 SVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPDI 1981
            SVWMFASN+ + A+DIREWMGCFN IRS+SKCAARMGQLFS+S Q + V  Q VE +PDI
Sbjct: 477  SVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVKLQHVEILPDI 536

Query: 1980 EATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRKL 1801
            E T+DG+ YCFSDGIGKIS +FA+ VA+KC L H P AFQIRYGGYKGV+ VDRNSFRKL
Sbjct: 537  EVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKL 596

Query: 1800 SLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLDQ 1621
            SLR SM KF+SKNRML IT  S  MPCYLNREIV LLSTLG+ED+ F  L    + LL +
Sbjct: 597  SLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKAFEDLLDNHLCLLGK 656

Query: 1620 ILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRSR 1441
            +LT+ E A+  L  M  GE+K+IL++MLLQGY P+ EPYL MML+ + + Q+SD+RSR R
Sbjct: 657  MLTTNEAALDVLESMGGGEVKKILMRMLLQGYAPNQEPYLSMMLQSHFENQISDLRSRCR 716

Query: 1440 IFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVVT 1261
            IF+PKGR+L+GCLDET  L YGQ YVR+T+T  ELQ G Q FF  V + TA+V GKVVVT
Sbjct: 717  IFIPKGRILVGCLDETGILKYGQVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVT 776

Query: 1260 KNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDE 1081
            KNPCLHPGD+RVL AVYE  LE K   DC++FPQKGERPHPNECSGGDLDGDLYF+CWDE
Sbjct: 777  KNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQKGERPHPNECSGGDLDGDLYFICWDE 836

Query: 1080 NLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPEK 901
            +LIP    TPMDY  RRPRIMDH+VT+EEIQ+FFVDYMI+DTLG ISTAHLVHADREP+K
Sbjct: 837  SLIPCQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDK 896

Query: 900  ARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLYR 721
            A +SKCL+LATLHSMAVDFAKTGA AEMPR L+PRE+PDFMER D+ MY S GVLGKLYR
Sbjct: 897  ALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYR 956

Query: 720  ATLDR--KENSMELVGQG--QYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYGA 553
              +    + NS +L      Q  YD DL   G+E + ETA+ H+ MY + +  L++YYGA
Sbjct: 957  GVMKSYIRRNSDDLSADRAIQDAYDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYYGA 1016

Query: 552  ETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKMA 373
            E E E+LTGNLR  S YLQ+D RRY ++KDRI+ S K+L KE K WF S C+  +H+K+A
Sbjct: 1017 EKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFTSCCQEDDHQKLA 1076

Query: 372  SAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            SAWYHVTYHP+YC +  N L FPW+ GD LL++K
Sbjct: 1077 SAWYHVTYHPSYCHESANCLGFPWVVGDILLNMK 1110


>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cicer arietinum]
          Length = 1122

 Score = 1242 bits (3213), Expect = 0.0
 Identities = 621/1058 (58%), Positives = 795/1058 (75%), Gaps = 10/1058 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLSG--KLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQFET ++ +    LS   KL+F    L+++ S  +I+ RP    NR+  G L+ GF + 
Sbjct: 58   VQFETFEAKSKALSLSSNDKLLFNSHFLRLAASSDDIVPRPPLPCNRLHNGTLHAGFPLG 117

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
             DR +V++SW+ VK  V+PE++R++FWV  + + +KL + F +++   G+          
Sbjct: 118  PDRMSVIQSWEGVKGWVMPERNRLDFWVTHHDQCFKLEIPFENILECDGFSSDGSKPNAL 177

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                   P+IY ++  P+  A    +RY   KE   F+WVRTT+FS LKSIG S++F W+
Sbjct: 178  LLKLKYGPRIYQRMEGPNVSAKFKADRYRFCKEDFAFMWVRTTDFSRLKSIGHSTSFCWE 237

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNS 2701
            ++E +S SD+  SFP Y    +  SLE  E+ CS ++ VPL++C  D+KL YE LFQLNS
Sbjct: 238  IEEESSDSDVFRSFPLYRENLKDLSLEDGEEFCSPTETVPLVKCRLDTKLPYEALFQLNS 297

Query: 2700 LVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHT-SVGN 2524
            LVH QK+S+ +V+ ++I++++SL  ++   I +KL ++ ST YE + F++ QLH  S+  
Sbjct: 298  LVHTQKISLASVDDELIDLIASLDDETKAVIFQKLHKMSSTCYEPLRFVKTQLHVLSIKK 357

Query: 2523 KSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFV 2344
            KS +PSS +R L +N +MSCHRALITP+KIY LGPE+E+ N+VVKHF  + SDFMR+TFV
Sbjct: 358  KSLRPSSQKR-LADNNIMSCHRALITPSKIYCLGPELETSNHVVKHFASYASDFMRITFV 416

Query: 2343 EEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRS 2164
            EEDW KL  +AV+TS+++GIF+KP+RT IY R+L++L +GIVIG+KRFEFLAFSASQLRS
Sbjct: 417  EEDWSKLPINAVSTSLQKGIFAKPFRTDIYKRVLTILRDGIVIGSKRFEFLAFSASQLRS 476

Query: 2163 SSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPD 1984
            +SVW+FASNDK+ A+DIREWMG F +IRSVSKCAARMGQLFSSSKQ   + PQDV+ IPD
Sbjct: 477  NSVWLFASNDKVKAEDIREWMGSFTNIRSVSKCAARMGQLFSSSKQTFEMAPQDVDIIPD 536

Query: 1983 IEATTDGIKYCFSDGIGKISLSFAKTVAKKCELE--HIPWAFQIRYGGYKGVLVVDRNSF 1810
            IE T+DGI YCFSDGIGKISLSFAK +A+K +L+   IP AFQIRYGGYKGV+ VDR+SF
Sbjct: 537  IELTSDGINYCFSDGIGKISLSFAKQLAQKLKLDQSRIPSAFQIRYGGYKGVIAVDRHSF 596

Query: 1809 RKLSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHL 1630
            RKLS+R SM KF+SKNRMLC+T  S+ MPC+LNREI++LLSTLG++DE  +A+Q+ Q+ L
Sbjct: 597  RKLSMRNSMLKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGVKDEALLAMQEEQLQL 656

Query: 1629 LDQILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRS 1450
            L ++LT RE A+  L  ++  + + IL++ML   YEP+SEPYL MMLK +   QLSD++S
Sbjct: 657  LGKMLTDREAALDVLESLSGADSRSILVKMLNGFYEPNSEPYLSMMLKAHYAYQLSDLKS 716

Query: 1449 RSRIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHM-VKDKTAIVVGK 1273
            R RIFVPKGR+LIGCLDET  L+YGQ +VR+T+T  + + G +   ++   D T I+VGK
Sbjct: 717  RCRIFVPKGRVLIGCLDETGILNYGQVFVRITVTKTKEKIGDENLQNVDGDDSTRIIVGK 776

Query: 1272 VVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFV 1093
            VVVTKNPCLHPGDIRVL+A+Y   LE KGL DCLVFPQKG RPHPNECSGGDLDGDL+F+
Sbjct: 777  VVVTKNPCLHPGDIRVLDAIYNEELEEKGLRDCLVFPQKGPRPHPNECSGGDLDGDLFFI 836

Query: 1092 CWDENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADR 913
             WD++LIP   D PMDY  RRPRIMDH VT+EEI +FFVDYMINDTLG ISTAHLVHADR
Sbjct: 837  SWDKDLIPPQTDNPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADR 896

Query: 912  EPEKARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLG 733
            EPEKARS KCLELA LHSMAVDFAKTGAPAEMPR L+PRE+PDFMER D+ MY S+GVLG
Sbjct: 897  EPEKARSRKCLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFMERFDKPMYISNGVLG 956

Query: 732  KLYRA----TLDRKENSMELVGQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMD 565
            KLYRA    T   + N +      +  YD  LE NGFE +LETA  H+ MYA+K+  LM 
Sbjct: 957  KLYRALVESTTQVRSNIVLSEKFAEEAYDHQLEVNGFEAFLETASSHKEMYAQKMSSLMS 1016

Query: 564  YYGAETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEH 385
            +Y AETE+EMLTGNL++ ++YLQ+D RRY DMKDRI+ S K LQ+EAKEWF S C+ HE+
Sbjct: 1017 FYDAETEDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQREAKEWFESDCQPHEY 1076

Query: 384  KKMASAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            + MASAWYHVTYHP Y  +   FLSFPWI GD LL IK
Sbjct: 1077 QLMASAWYHVTYHPKYSHESSTFLSFPWIVGDILLHIK 1114


>ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [Populus euphratica]
          Length = 1105

 Score = 1240 bits (3209), Expect = 0.0
 Identities = 630/1053 (59%), Positives = 781/1053 (74%), Gaps = 5/1053 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQF +++  +    LS   KL+ +  NLK+S +  +II RP    NR+  G L  GF+ +
Sbjct: 57   VQFASLEVKHEALSLSLQNKLVLKSQNLKLSETCDDIIPRPVMDQNRMENGVLYAGFMKK 116

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGE-TYKLVVQFGDVISSAGYCLGXXXXXX 3064
            +    VLE W+ V+   +PE+ R+EFW+    E  YKLVV+F D++ + G+ L       
Sbjct: 117  DTTLCVLEYWEGVRGWFMPERRRIEFWIRVGQEFRYKLVVEFEDILEAVGFPLDGDKVNA 176

Query: 3063 XXXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVW 2884
                    P+IY KIS P   +    NRY   KE  +FLWVRTT+ S++KSIG+S++F W
Sbjct: 177  VVLKLRYGPRIYQKISGPGIASKFSTNRYFYCKEDFDFLWVRTTDISAIKSIGQSTSFCW 236

Query: 2883 QLDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLN 2704
            ++ E    SD   +FP Y+    I  LE  E+  S S+ VPLIRC SD KL+YE+LFQLN
Sbjct: 237  EIGEGLEASDTFRNFPYYQEFMNILDLEDGEEFRSASETVPLIRCGSD-KLAYEVLFQLN 295

Query: 2703 SLVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGN 2524
            SLVH QK+S+ AV+SD+++IL +L++++A  IL+KL ++K T Y+ +SF++  L  S+  
Sbjct: 296  SLVHTQKISLAAVDSDLMKILRNLTVNTAFIILQKLHKLKMTCYDPLSFVKQSLRESL-- 353

Query: 2523 KSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFV 2344
                 SS  + L  N +MSCHRALITP+KI+ LGPE E+ NYVVKHF ++ SDF+RVTFV
Sbjct: 354  -----SSPPKSLTENNIMSCHRALITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFV 408

Query: 2343 EEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRS 2164
            EEDW KL ++A++TSI++GIF+KP+RT IYHRILS+L +GIVIG KRFEFLAFSASQLRS
Sbjct: 409  EEDWSKLPANAISTSIQRGIFAKPFRTGIYHRILSILRDGIVIGAKRFEFLAFSASQLRS 468

Query: 2163 SSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPD 1984
            +SVWMFASN+ + A+DIR+WMGCF+ IRSVSKCAARMGQLFSSS Q   VP QDVE IPD
Sbjct: 469  NSVWMFASNNDVKAEDIRKWMGCFDKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPD 528

Query: 1983 IEATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRK 1804
            IE TTDGI YCFSDGIGKISLSFAK VA KC L H P AFQIRYGGYKGV+ VDRNSFRK
Sbjct: 529  IEVTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRK 588

Query: 1803 LSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLD 1624
            LSLR SM KF S+NRML +T  S+ MPCYLNREI++LLSTLG+ DE F ALQQ Q++ L 
Sbjct: 589  LSLRSSMLKFDSENRMLNVTKWSESMPCYLNREIISLLSTLGVADEIFQALQQKQLYQLR 648

Query: 1623 QILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRS 1444
            ++LT++E A+  L  +   + K IL+QMLLQGYEP+ EPYL MML+ Y +  L ++RSR 
Sbjct: 649  KMLTNKESALDVLENLVWADSKNILVQMLLQGYEPNVEPYLSMMLQAYHENSLMELRSRC 708

Query: 1443 RIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVV 1264
            RIFVPKGR+LIGCLDE+ TLDYGQ YVR+T+T  ELQC  Q FF  V + T+I++G+V V
Sbjct: 709  RIFVPKGRILIGCLDESGTLDYGQVYVRITMTKAELQCSDQSFFRKVDESTSIIIGEVAV 768

Query: 1263 TKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWD 1084
            TKNPCLHPGDIRVL AVY   LE KGL DC++FPQ G RPHPNECSGGDLDGD +F+ WD
Sbjct: 769  TKNPCLHPGDIRVLEAVYNVELEEKGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWD 828

Query: 1083 ENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPE 904
            E L+P   + PMDY+  R RI+DH+VT+EEIQ+FFVDYMINDTLG ISTAHLVHAD EP+
Sbjct: 829  EGLLPCHTEAPMDYVGGRQRIVDHNVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPD 888

Query: 903  KARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLY 724
            KARS KCL+LATLHSMAVDFAKTGAPAEMP  L+PRE+PDFMER ++ MY S GVLGKLY
Sbjct: 889  KARSEKCLQLATLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERVEKKMYISDGVLGKLY 948

Query: 723  RATLD--RKENSMELVGQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYGAE 550
            R   D  R+E S ++    + TYD DLE  GFE +L  A  ++  Y EK+  LMDYYGA+
Sbjct: 949  RDIHDSTRQERSKKM---AEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAK 1005

Query: 549  TEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKMAS 370
            TE+E+LTGNLR    YLQ+D R+Y D+KDRI+ S K L+KEAKEWF SSC   EH+ MAS
Sbjct: 1006 TEDEILTGNLRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSCDPTEHQCMAS 1065

Query: 369  AWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            AWYHVTYHP Y  +  N LSFPWI GD LL+IK
Sbjct: 1066 AWYHVTYHPTYFHERMNCLSFPWIVGDILLNIK 1098


>ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Jatropha
            curcas] gi|643720862|gb|KDP31126.1| hypothetical protein
            JCGZ_11502 [Jatropha curcas]
          Length = 1122

 Score = 1240 bits (3209), Expect = 0.0
 Identities = 630/1055 (59%), Positives = 783/1055 (74%), Gaps = 7/1055 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHL--SGKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQF T++  +    L    KL+F+   L +S ++ +II RP +  +R   G L  GF+ Q
Sbjct: 60   VQFSTLEFRHKAQSLCLQNKLVFKSHYLLVSDTYDDIIPRPIKPQHRQENGVLYAGFMKQ 119

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
                 VLESW+ V+  ++PE+ RVEFW+  + + YK+ ++F DV  + G+CLG       
Sbjct: 120  ERCLCVLESWEDVRGWLMPERRRVEFWLWVDKDCYKVEIRFEDVKDAVGFCLGGDKVNAV 179

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                   P+IY +IS PD  +    +RY I KE  +F+WVRT +FSS+KSIGKS++F W+
Sbjct: 180  LLKLRYGPRIYKRISGPDVASKFSADRYHICKEDFDFIWVRTADFSSVKSIGKSTSFCWE 239

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCS-GSDLVPLIRCPSDSKLSYEILFQLN 2704
            ++E    SDI  SFP Y  + R   LE  E+     S++VPL    SDSKL+YEI FQLN
Sbjct: 240  VEEGLDASDIFTSFPYYVEDRRDIVLEDGEKFHPITSEMVPLAGYESDSKLAYEIFFQLN 299

Query: 2703 SLVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGN 2524
            SLVH  K+S+ AV++D+ +IL SL++D+A  IL+KL ++  T Y+ +SF++ QLH    N
Sbjct: 300  SLVHTHKISLAAVDTDLFKILGSLTIDTAMAILQKLHKLTFTCYDPVSFVKKQLHAPRRN 359

Query: 2523 KSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFV 2344
               KPSSS++   ++ +M CHRALITP+KIY LGPE+ES NYVVK+F  + SDFMRVTFV
Sbjct: 360  LK-KPSSSQKSSTDHNIMICHRALITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFV 418

Query: 2343 EEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRS 2164
            EEDW KL  +A++TSI+ GIF+KP+RT IY RILSVL +GIVIG KRFEFLAFSASQLRS
Sbjct: 419  EEDWSKLPVNAISTSIQHGIFAKPFRTKIYERILSVLRDGIVIGAKRFEFLAFSASQLRS 478

Query: 2163 SSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPD 1984
            +SVWMFASND + A+DIR+WMGCFN IRS+SKCAARMGQLFS+SKQ   VP +DVE IPD
Sbjct: 479  NSVWMFASNDNVKAEDIRQWMGCFNKIRSISKCAARMGQLFSASKQTFVVPAEDVEIIPD 538

Query: 1983 IEATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRK 1804
            IE T+DGI YCFSDGIGKISLSFA+ VA+KC L H P AFQIRYGG+KGV+ VDRNS RK
Sbjct: 539  IEVTSDGIGYCFSDGIGKISLSFAQQVAQKCGLNHTPSAFQIRYGGFKGVIAVDRNSLRK 598

Query: 1803 LSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLD 1624
            LSLR SM KF+S+NRML +T  S  MPCYLNREIVTLLSTLG++DE F  LQQ Q+HLL 
Sbjct: 599  LSLRSSMLKFESENRMLNVTKWSDSMPCYLNREIVTLLSTLGVKDEIFQGLQQQQLHLLG 658

Query: 1623 QILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRS 1444
            ++L  RE A+  L  +   + + I+++MLLQGY+P+ EPYL MML+ Y +  L ++RSR 
Sbjct: 659  RMLNDREAALDVLENLAWVDSRNIMVKMLLQGYKPNVEPYLSMMLQAYHENLLVELRSRC 718

Query: 1443 RIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVV 1264
            R+FVPKGR+LIGCLDE   LDYGQ YVRVTL+  ELQ   Q FF  V + T+IV GKVVV
Sbjct: 719  RVFVPKGRILIGCLDEEGILDYGQIYVRVTLSKSELQNADQSFFRKVDETTSIVTGKVVV 778

Query: 1263 TKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWD 1084
            TKNPCLHPGD+RVL AVYE  LE KGL DC++FPQKGERPHPNECSGGDLDGDL+F+ WD
Sbjct: 779  TKNPCLHPGDVRVLEAVYEVGLEEKGLVDCILFPQKGERPHPNECSGGDLDGDLFFISWD 838

Query: 1083 ENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPE 904
            E+LIP   ++PMDY+ RRPRIMDHDV +EEI KFFVDYMINDTLG ISTAHLVHADREP+
Sbjct: 839  EDLIPSQTESPMDYLGRRPRIMDHDVKLEEIHKFFVDYMINDTLGAISTAHLVHADREPD 898

Query: 903  KARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLY 724
            KARS KCL+LA LHSMAVDFAKTGAPAEMPR L+P+E+PDFMER D++ Y S  VLGKLY
Sbjct: 899  KARSRKCLKLAELHSMAVDFAKTGAPAEMPRALKPKEFPDFMERFDKSTYISDAVLGKLY 958

Query: 723  RATLDRK-ENSMELVGQ---GQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYG 556
            R TLD   +   + +      + TYD +LE  GF ++++ A  H+ MY EKL  LM+YY 
Sbjct: 959  RGTLDSTLQGRTKFIWSEKIAEATYDCNLEVEGFMEFIDIAANHKYMYMEKLSGLMNYYE 1018

Query: 555  AETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKM 376
            A+ E+EMLTGNLR+ + YLQ+D RRY D KDRI+ S K+LQKEAKEWF SSC+    + +
Sbjct: 1019 AKNEDEMLTGNLRNKAMYLQRDNRRYGDTKDRILLSMKSLQKEAKEWFESSCRPSTQQCL 1078

Query: 375  ASAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            ASAWYHVT HPNY  +G   L FPWI GD LL+IK
Sbjct: 1079 ASAWYHVTCHPNYFQEGITCLGFPWIVGDILLNIK 1113


>ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
            gi|561028757|gb|ESW27397.1| hypothetical protein
            PHAVU_003G198500g [Phaseolus vulgaris]
          Length = 1119

 Score = 1233 bits (3190), Expect = 0.0
 Identities = 616/1063 (57%), Positives = 787/1063 (74%), Gaps = 8/1063 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLSG--KLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQFE +D+ +    LS   +L+     L++S + ++II RP    +R+  G L  G ++ 
Sbjct: 59   VQFEALDAKSRALSLSQLQQLLIHSHFLRLSDTSEDIIFRPL---HRLQNGVLYAGLMLS 115

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
            +DR +VLESW+ V   V+P++ +++F V+ +G+ Y++ + F D++ S GYCLG       
Sbjct: 116  DDRMSVLESWEGVAGLVVPQRRKLDFLVLHDGDCYRVEIFFEDILESHGYCLGAEGKLNA 175

Query: 3060 XXXXXXA-PKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVW 2884
                    PKIY K   PD      N+RY   KE SEFLWVRTT+FS+LKSIG S++F W
Sbjct: 176  LLLKLKFGPKIYKKKMGPDVATKFRNDRYHFCKEDSEFLWVRTTDFSALKSIGHSTSFCW 235

Query: 2883 QLDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLN 2704
            ++ E    SD+  S P Y+   R   LE  E+ CS ++ VPL++C S SKL YE LFQLN
Sbjct: 236  EIAEEQLASDVFTSLPLYKENLRDLVLEDGEEFCSSTEAVPLVKCASQSKLPYEALFQLN 295

Query: 2703 SLVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGN 2524
            SLVH QK+S+ +V+ ++I++L  L  +    I +KL Q+  T Y+ + F++ QLH     
Sbjct: 296  SLVHTQKISLASVDDELIDLLGGLDEEIRAVIFQKLHQMGFTCYDPLKFVKTQLHVLSNK 355

Query: 2523 KSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFV 2344
            K  +P SS+++L +N +MSCHRAL+TPTKIY LGPE+E+ N+VVKHF    SDFMR+TFV
Sbjct: 356  KRSQPLSSQKRLIDNNIMSCHRALVTPTKIYCLGPELETSNHVVKHFASCASDFMRITFV 415

Query: 2343 EEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRS 2164
            EE+W KL + AV+T +++GIFSKP++T IY RIL++L +GIVIG+KRFEFLAFSASQLRS
Sbjct: 416  EENWNKLPNYAVSTGVQKGIFSKPFKTEIYKRILTILRDGIVIGSKRFEFLAFSASQLRS 475

Query: 2163 SSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPD 1984
            +SVW+FASND + A DIREWMGCFN+IRSVSKCAARMGQLFSSS Q   V PQDVE IPD
Sbjct: 476  NSVWLFASNDNVKATDIREWMGCFNNIRSVSKCAARMGQLFSSSMQTFEVAPQDVEVIPD 535

Query: 1983 IEATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRK 1804
            IE T+DG+ YCFSDGIGKIS SF + VA+K +L+H P AFQIR+GGYKGV+ VDR+SFRK
Sbjct: 536  IEVTSDGVSYCFSDGIGKISQSFGRQVAQKLKLDHTPSAFQIRFGGYKGVITVDRHSFRK 595

Query: 1803 LSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLD 1624
            LSLR SM KF+SKNRMLC+T  S+ MPC+LNREI++LLSTLG++DE F+A QQ Q++LL 
Sbjct: 596  LSLRNSMLKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGVKDEAFLARQQDQLNLLG 655

Query: 1623 QILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRS 1444
            ++LT  + A+  L G+N  + + IL++ML +  EP+SEPYL MMLK Y   QLSD++SRS
Sbjct: 656  RMLTDSKAALDVLEGLNGADSRSILVKMLHEFNEPNSEPYLSMMLKAYYAYQLSDLKSRS 715

Query: 1443 RIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVV 1264
            RIFVPKGR+L+GCLDET  L+YG+ +VRVT+     +           D T I+VGKVVV
Sbjct: 716  RIFVPKGRVLVGCLDETGLLNYGEVFVRVTVKRTTEKFDDNLRKGGDDDSTRIIVGKVVV 775

Query: 1263 TKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWD 1084
            TKNPCLHPGD+RVL+A+Y   LE KGL DCLVFPQ G RPHPNECSGGDLDGDL+F+ WD
Sbjct: 776  TKNPCLHPGDVRVLDAIYNEELEEKGLRDCLVFPQNGHRPHPNECSGGDLDGDLFFISWD 835

Query: 1083 ENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPE 904
            ++LIP   + PMDY  RRPRIMDH VT+EEIQ FFVDYMINDTLG ISTAHLVHADREP+
Sbjct: 836  KDLIPAQTEAPMDYTGRRPRIMDHKVTLEEIQHFFVDYMINDTLGAISTAHLVHADREPD 895

Query: 903  KARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLY 724
            KA+S KCLELA LHSMAVDFAKTGAPA MPRVL+PRE+PDFMER ++ MY S GVLGKLY
Sbjct: 896  KAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVEKPMYISKGVLGKLY 955

Query: 723  RATLDR----KENSMELVGQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYG 556
            RA ++     K + +      +  YD  LE NGFE +LETA  H+ MYA+K+  LM++YG
Sbjct: 956  RAIIESQMQIKYSFVWSEKLAEEAYDRSLEVNGFEAFLETASSHKEMYAQKMSSLMNFYG 1015

Query: 555  AETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKM 376
            AETE+EML GNL++ ++YLQ+D RRY DMKDRI+ S K LQ+EAKEWF +SC+ HE++ M
Sbjct: 1016 AETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKEWFETSCQPHEYRPM 1075

Query: 375  ASAWYHVTYHPN-YCADGKNFLSFPWIFGDKLLDIKQKGKSAR 250
            ASAWYHVTYHP+ YC +   FLSFPWI G+ LL IK   K+ +
Sbjct: 1076 ASAWYHVTYHPSYYCQESSCFLSFPWIVGEVLLQIKSVNKAVQ 1118


>gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gossypium arboreum]
          Length = 1147

 Score = 1233 bits (3189), Expect = 0.0
 Identities = 624/1062 (58%), Positives = 791/1062 (74%), Gaps = 10/1062 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQF    +++    LS    L+F+  +LK+S ++ +II RP ++ +R+ GG L+ GF+  
Sbjct: 58   VQFAAPQAMSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAGFMSS 117

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXX 3061
            +D   VLE W+ V+  ++PE+ R+EFWV  +GE YKL   F D+  + G C         
Sbjct: 118  DDCLRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDLFETVGCCFDGSACNAL 177

Query: 3060 XXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVWQ 2881
                  AP+IY K+S P+  +    +RY I KE  +FLWVRTT+FS +KSIG+S++F W+
Sbjct: 178  LLRVRYAPRIYRKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWE 237

Query: 2880 LDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLNS 2701
             +   S SD+    P Y  + +  SLE   +  S S++VPL++ PSDSKL+YEILFQLN+
Sbjct: 238  FNAGFSISDMSTYLPCYREDIQSPSLEARGEFSSPSEIVPLVKFPSDSKLAYEILFQLNA 297

Query: 2700 LVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGNK 2521
            LVH QK+SI AV++D+I ILS L +++A  IL+KLR ++S  Y  +SF++ +L T  G  
Sbjct: 298  LVHTQKISIAAVDTDLIGILSVLPVETAVMILQKLRLLQSPCYNPVSFVKAKLPT--GKN 355

Query: 2520 SHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFVE 2341
               P S   +LKN+ +MSCHRALITPTKIY LGPE+E+ NYVVK+F E+ SDFMRVTFVE
Sbjct: 356  YRIPLSVSERLKNHNVMSCHRALITPTKIYCLGPELETANYVVKNFAEYASDFMRVTFVE 415

Query: 2340 EDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRSS 2161
            EDW KL ++A++T +  G+FS+P++T IY RILSVL NGIVIG KRF+FLAFSASQLRS+
Sbjct: 416  EDWSKLSANAISTGVHLGVFSRPFKTKIYDRILSVLQNGIVIGDKRFKFLAFSASQLRSN 475

Query: 2160 SVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPDI 1981
            SVWMFASND++ A+DIREWMGCF  IRS+SKCA+RMGQLFSSS   L VP QDVE I DI
Sbjct: 476  SVWMFASNDEVKAEDIREWMGCFKKIRSISKCASRMGQLFSSSMPTLVVPVQDVEIIDDI 535

Query: 1980 EATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRKL 1801
            E  TDGI YCFSDGIGKISL FA+ VA+KC L HIP AFQIRYGGYKGV+ VDRNSF K+
Sbjct: 536  EVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQIRYGGYKGVVAVDRNSFWKM 595

Query: 1800 SLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLDQ 1621
            SLR+SM KF+SK RML +T  S+ MPC+LNREIVTL STLGI+DE F  +Q+ Q+ LL +
Sbjct: 596  SLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVTLFSTLGIKDEVFERMQEEQLCLLGK 655

Query: 1620 ILTSREVA---IRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRS 1450
            ++T+RE A   ++ LGG+N+   K IL++M LQ YEP+ +PYL MML+ + +  LSD++S
Sbjct: 656  MVTNREAALDTLQSLGGVNS---KNILVEM-LQFYEPNVQPYLSMMLQAHYENLLSDLKS 711

Query: 1449 RSRIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKV 1270
            R RIFVPKGR+LIGCLDET TL+YGQ Y+ + +   EL+C  Q +F  V ++TAIV+GKV
Sbjct: 712  RCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRKVDEETAIVIGKV 771

Query: 1269 VVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVC 1090
            VVTKNPCLHPGD+RVL AVYEP LE KGL DCLVFP+KGERPHPNECSGGDLDGD +F+ 
Sbjct: 772  VVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPEKGERPHPNECSGGDLDGDQFFIS 831

Query: 1089 WDENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADRE 910
            WD++LIP   + PMDY  +RPRIMDH+VT+EEIQKFFVDYMINDTLG ISTAHLVHADRE
Sbjct: 832  WDKDLIPCQTEPPMDYTGQRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADRE 891

Query: 909  PEKARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGK 730
            P+KARS  CL LATLHSMAVDFAKTGAPAEMPR L+PRE+PDFM+R ++ MY SSGVLGK
Sbjct: 892  PDKARSENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGK 951

Query: 729  LYRATLDR----KENSMELVGQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDY 562
            LYRAT++     +   +      +  YD DLE NGFE  +  AE H+ MY E++  LM Y
Sbjct: 952  LYRATINSTVQIRSKFVWTKEMAELAYDHDLEVNGFESLISVAETHKEMYEERMSLLMSY 1011

Query: 561  YGAETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSC-KNHEH 385
            Y  E E+E+LTGN+ + + +L +D RRY +MK+RI+ S K LQ+EAKEWF SSC K  EH
Sbjct: 1012 YDVEYEDEILTGNMYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEH 1071

Query: 384  KKMASAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIKQKGK 259
            +K+ASAWY+VTYHPNY  +  N LSFPWI GD LL IK + K
Sbjct: 1072 QKLASAWYYVTYHPNYFEERMNSLSFPWIVGDILLRIKSRNK 1113


>ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana tomentosiformis]
          Length = 1120

 Score = 1232 bits (3188), Expect = 0.0
 Identities = 621/1055 (58%), Positives = 777/1055 (73%), Gaps = 7/1055 (0%)
 Frame = -3

Query: 3414 VQFETIDSVNTINHLS--GKLIFQGINLKISPSFKEIIVRPTQSYNRVGGGALNVGFLVQ 3241
            VQFET  S      LS  GKL+F+G  L ++ SF +II RP +   R   G L+ G L++
Sbjct: 58   VQFETAQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIEPNYRFQKGILHTGVLLK 117

Query: 3240 NDRFNVLESWKSVKVDVLPEKHRVEFWVVE-NGETYKLVVQFGDVISSAGYCLGXXXXXX 3064
            ND   VLE+W++VK  ++PE+  +EFWV    GE Y+L VQFGD+I + G C        
Sbjct: 118  NDYMEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCG-CSLEDEKPA 176

Query: 3063 XXXXXXXAPKIYHKISKPDNGASVGNNRYSIFKESSEFLWVRTTEFSSLKSIGKSSAFVW 2884
                   APK+Y ++S P   +   ++RY + KE  EFLWVRTT+FS++KSIG SS+  W
Sbjct: 177  LLLKLKHAPKLYQRVSGPGVASKFSSDRYHVCKEDCEFLWVRTTDFSAMKSIGCSSSLCW 236

Query: 2883 QLDERTSFSDIINSFPRYEGESRIFSLELVEQSCSGSDLVPLIRCPSDSKLSYEILFQLN 2704
            ++++    SD+++S P    +     L+ V    S S+LVPL   PSD KL YEILFQLN
Sbjct: 237  EIEDGLLSSDLLSSLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLN 296

Query: 2703 SLVHAQKLSIPAVNSDVIEILSSLSLDSATKILRKLRQVKSTYYEVISFIQCQLHTSVGN 2524
            SLVH  K+S+ AV +D+IE+LS L LD+A  IL+K+ +++S+ +E + FI+ +LH    N
Sbjct: 297  SLVHTHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSSCFEPVPFIKTRLHVLGKN 356

Query: 2523 KSHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESWNYVVKHFEEHVSDFMRVTFV 2344
              ++PSSS  +L N  +MS HR L+TP+K+Y LGPE+E+ NY+VK+F  H SDF+RVTFV
Sbjct: 357  SKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFASHASDFLRVTFV 416

Query: 2343 EEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNGIVIGTKRFEFLAFSASQLRS 2164
            EEDW KL  +A++ S+EQGIF+KPYRT IYHRILS+L +G+VIGTKRF FLAFSASQLRS
Sbjct: 417  EEDWSKLSPNAISISVEQGIFAKPYRTKIYHRILSILRDGLVIGTKRFLFLAFSASQLRS 476

Query: 2163 SSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQLFSSSKQVLNVPPQDVENIPD 1984
            +SVWMFASN+ + A+DIREWMG FN IRSVSKCAARMGQLFS+S Q + V    VE +PD
Sbjct: 477  NSVWMFASNEYVKAEDIREWMGYFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPD 536

Query: 1983 IEATTDGIKYCFSDGIGKISLSFAKTVAKKCELEHIPWAFQIRYGGYKGVLVVDRNSFRK 1804
            IE T+DG+ YCFSDGIGKIS +FA  VA+KC L + P AFQIRYGGYKGV+ VDRNS+RK
Sbjct: 537  IEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSYRK 596

Query: 1803 LSLRESMKKFKSKNRMLCITSCSQWMPCYLNREIVTLLSTLGIEDEKFIALQQAQIHLLD 1624
            LSLR SM KF+SKN+ML IT  S  MPCYLNREIV LL+TLG+ED+    L    +HLL 
Sbjct: 597  LSLRGSMLKFESKNKMLNITKWSDAMPCYLNREIVILLATLGVEDKVLEDLLDNHLHLLG 656

Query: 1623 QILTSREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPYLFMMLKEYRDQQLSDIRSRS 1444
            ++LT+ E A+  L  +  G++KRIL++ML QGY P+ EPYL MML+ + + QLSD+RSR 
Sbjct: 657  KMLTTNEAALDVLESIGGGDVKRILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRC 716

Query: 1443 RIFVPKGRLLIGCLDETATLDYGQAYVRVTLTAEELQCGSQPFFHMVKDKTAIVVGKVVV 1264
            RIF+PKGR+L+GCLDET  L+YGQ Y R+T+T  ELQ G Q FF  V + TA+V GKVVV
Sbjct: 717  RIFIPKGRVLVGCLDETGILNYGQVYARITMTKAELQSGQQNFFQKVDETTAVVRGKVVV 776

Query: 1263 TKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERPHPNECSGGDLDGDLYFVCWD 1084
            TKNPCLHPGD+RVL AVYE  LE K   DC++FPQKGERPHPNECSGGDLDGDLYF+ WD
Sbjct: 777  TKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWD 836

Query: 1083 ENLIPLCNDTPMDYIARRPRIMDHDVTIEEIQKFFVDYMINDTLGMISTAHLVHADREPE 904
            ENLIP    TPMDY  R+PRIMDH+VT+EEIQ+FFVDYMI+DTLG ISTAHLVHADREP+
Sbjct: 837  ENLIPRQTVTPMDYTGRKPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPD 896

Query: 903  KARSSKCLELATLHSMAVDFAKTGAPAEMPRVLRPREYPDFMEREDRAMYPSSGVLGKLY 724
            KA + KCL+LATLHSMAVDFAKTGA AEMPR L+PRE+PDF+ER D+ MY S GVLGKLY
Sbjct: 897  KALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLY 956

Query: 723  RATLDR--KENSMEL--VGQGQYTYDADLEENGFEKYLETAEGHRNMYAEKLICLMDYYG 556
            RA +    + NS +L  V   Q  YD DL   G+E ++ TA+ H+ MY +++  L++YYG
Sbjct: 957  RAIVKSSVRGNSDDLGSVRAIQDAYDHDLLFEGYEAFIVTAKNHKEMYLDRMNSLLNYYG 1016

Query: 555  AETEEEMLTGNLRDLSAYLQKDKRRYTDMKDRIIDSTKTLQKEAKEWFHSSCKNHEHKKM 376
            AE E E+LTGNLR  S YLQ+D RRY ++KDRI+ S K+LQKE K WF   CK  E KK+
Sbjct: 1017 AEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEKKKL 1076

Query: 375  ASAWYHVTYHPNYCADGKNFLSFPWIFGDKLLDIK 271
            ASAWY VTYHP+YC    N L FPW+ GD LLDIK
Sbjct: 1077 ASAWYQVTYHPSYCQGSANCLGFPWVVGDVLLDIK 1111