BLASTX nr result
ID: Papaver31_contig00014361
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00014361
(4909 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 122 3e-86
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 116 3e-72
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 123 3e-68
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 114 7e-68
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc... 115 5e-67
ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449... 152 2e-64
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera] 137 4e-59
ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975... 125 2e-58
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays] 117 3e-55
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 117 3e-55
gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subc... 119 6e-55
gb|AAS01934.1| putative Integrase core domain containing protein... 119 6e-55
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc... 117 1e-54
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc... 117 2e-54
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc... 117 2e-54
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group] 117 2e-54
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group] 117 2e-54
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group] 117 2e-54
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-... 117 2e-54
gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group] 117 2e-54
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 122 bits (307), Expect(6) = 3e-86
Identities = 78/201 (38%), Positives = 110/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
+NE DK +Y + VIVCLYVDDMLI ++ +I STK ++ + L
Sbjct: 978 INECDKCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVIL 1037
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + L +L ++++ + A TP D + L KNKG VS +EYSR+
Sbjct: 1038 GIKIKRTSNELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRI 1097
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM M+C P+IAY + KLSRY + +H + RVL YL+++ + L Y R PAV
Sbjct: 1098 IGSLMYLMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYXLHYTRYPAV 1157
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG DANW + K+SK SG
Sbjct: 1158 LEGYSDANWISNVKDSKSHSG 1178
Score = 91.3 bits (225), Expect(6) = 3e-86
Identities = 60/131 (45%), Positives = 75/131 (57%), Gaps = 18/131 (13%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL V WK SKQT A+ MESE IALDK E AE LR FLED +PVP I IH
Sbjct: 1181 FTLGGAAVSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIH 1240
Query: 3844 RFSLAVIAKAKN------------------*LISIGVIYIDWIESKENIA*PLTKGFFKE 3969
S + I +A++ L+S GVI +D+++SK+NIA PLTKG +E
Sbjct: 1241 CDSQSAIGRAQSNMYNGKSRHIRRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRE 1300
Query: 3970 VVRIASKGMGL 4002
+V +S GM L
Sbjct: 1301 LVEKSSXGMXL 1311
Score = 83.2 bits (204), Expect(6) = 3e-86
Identities = 68/198 (34%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Frame = +2
Query: 2462 VDPRRSKMIITETSYGLNYIIFLY*SEFQTRKETITFIEITFR*EASFSEMDSVRQIILG 2641
V+PRRSK + TE S+G +++ F+ E QT KE + E EA SE+DS+ Q
Sbjct: 787 VEPRRSKRVRTEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTW 846
Query: 2642 SLLVYL*GVRPYD*MSL*EET*GRW---NCGKI*G*LXXXXXXXXXXXX--------ISS 2788
L+ G +P +W K+ G + +
Sbjct: 847 ELVDLPPGCKPLS---------SKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDT 897
Query: 2789 YSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKFC 2968
YS +TRI+S M++ AA+ NLEIHQ+D+K IY+EQPE F G E K C
Sbjct: 898 YSPVTRINSIRMVLAIAALRNLEIHQMDMKE----------IYMEQPEGFSAPGQEKKVC 947
Query: 2969 KLNKYLYDSK*ARK**HE 3022
KL K LY K A K HE
Sbjct: 948 KLVKSLYGLKQAPKQWHE 965
Score = 65.5 bits (158), Expect(6) = 3e-86
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 9/147 (6%)
Frame = +1
Query: 1681 KIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTLL 1860
K E VE+K F ++V+ N++PL+LI + ++ +T+ G V +
Sbjct: 504 KCETCVEAKLTRSSF-QSVERNTEPLDLIHSDICDLKFVQTR---GGNKYFITFVDDSTK 559
Query: 1861 YN*LGVRMIP*KP*E----YKLEIESEVYVTTKLVRSKHDGKYE-----IHMLNGIIHEI 2013
Y + + + E YK E+E+++ K++RS G+YE I +GIIHE
Sbjct: 560 YCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHET 619
Query: 2014 VSPYSP*SNGIVERKSRIIKEMIYAML 2094
+PYSP SNG+ ERK+R +KEM+ AML
Sbjct: 620 TAPYSPQSNGVAERKNRTLKEMMNAML 646
Score = 44.7 bits (104), Expect(6) = 3e-86
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Frame = +3
Query: 2103 ITQNLWEEVVL*FCYILNRVTFKGWDKN----------SYDYEKIYNLLMHTS------- 2231
+ QN+W E +L Y+LN+V K +K SY Y +++ L +
Sbjct: 651 LPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKV 710
Query: 2232 KCGG-----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
K G + I + AYRFLV S+ D I ESR+A FFE V+
Sbjct: 711 KIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVF 761
Score = 26.9 bits (58), Expect(6) = 3e-86
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 1478 FLGNSYRT*GLYKLKGKS---DEVNIVDSCAFFCASLNVLHGRLGTV 1609
++G Y + G++KL + +N + + S N+ HGRLG V
Sbjct: 434 YVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLGHV 480
Score = 52.0 bits (123), Expect(2) = 4e-06
Identities = 23/60 (38%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +3
Query: 1146 MMSEVILI-TNVRDGWVDSGATKYVC*NRDLFTSYQRIRDVEKLNMSNSSATEVA*NGKV 1322
++SEV L+ +N ++ W+D+GAT++VC ++ +F++++ I + EK+ M NS+ +E+ GKV
Sbjct: 322 VVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKV 381
Score = 30.0 bits (66), Expect(2) = 4e-06
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 895 QAHVDEHKSSKADKGENIKHNSKRSLHKKGMFRKTESGITLIKGDCYVCKIPGHTAVKCR 1074
+A+ EH S K N K + K G+ +K + +G C+ C GH +V CR
Sbjct: 240 KANFVEHGQSSKAKTNNNKGKGSKLGPKGGISKKPK-----FQGKCFNCGKQGHKSVDCR 294
Query: 1075 QHK 1083
K
Sbjct: 295 LPK 297
>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 116 bits (291), Expect(5) = 3e-72
Identities = 80/204 (39%), Positives = 109/204 (53%), Gaps = 3/204 (1%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI T+++ I TK ++ L L
Sbjct: 972 VNEADKCVYYRFSGGKGVIMCLYVDDILIFGTDLEAIMETKLFLSKNFDMKDLGEADVIL 1031
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLK---RYNQCDCKPASTPYDYSCILKKNKGSGVS*LEY 3407
K+IK + S V K R+ DCKP +TPYD S L K +G V+ L Y
Sbjct: 1032 NI---KLIKGEDGITLSQSHYVEKVMTRFGHMDCKPVTTPYDPSYTLSKYEGEPVNQLLY 1088
Query: 3408 SRVIGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERC 3587
S++IG LM + P+I+Y + +L+RY+ S H AL RVL YLK ++ + Y
Sbjct: 1089 SQIIGSLMYLSSATRPDISYAVCRLARYSASPGDRHWVALYRVLRYLKGAMNLGIKYTGF 1148
Query: 3588 PAVLEGLYDANWTVDSKESKFMSG 3659
P+VLEG DANW DS + K SG
Sbjct: 1149 PSVLEGFSDANWISDSDQMKSTSG 1172
Score = 77.0 bits (188), Expect(5) = 3e-72
Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 6/194 (3%)
Frame = +2
Query: 2459 NVDPRRSKMIITETSYGLNYIIFLY*SEFQTRKETITFIEITFR*EASFSEMDSVRQIIL 2638
+++ RRSK TE S G +YII+L E ++ E T + + EA SEMDS+
Sbjct: 770 DLELRRSKRQRTEKSLGDDYIIYLVDEEPRSLTEAYTSPDAEYWREAVLSEMDSIISNGT 829
Query: 2639 GSLLVYL*GVRP------YD*MSL*EET*GRWNCGKI*G*LXXXXXXXXXXXXISSYSAL 2800
+ G +P + + T ++ + +YS +
Sbjct: 830 WEITDLPAGCKPVGCKWIFRRKRRPDGTIEKYKARLV----AKGFTQKKEEDYFDTYSPV 885
Query: 2801 TRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKFCKLNK 2980
R+ + +L+ AA L +HQ+DVK F N EL++ IY++QPE FVVKG E+K C+L K
Sbjct: 886 ARLPTIRVLLALAAAYKLLVHQMDVKTAFLNGELEEEIYMQQPEGFVVKGQESKVCRLIK 945
Query: 2981 YLYDSK*ARK**HE 3022
LY K A + HE
Sbjct: 946 SLYGLKQAPRQWHE 959
Score = 68.9 bits (167), Expect(5) = 3e-72
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTLA G V W+ SKQ+ + + E+E +ALD A AE LR L D + +P+PA+ ++
Sbjct: 1175 FTLAGGAVSWRSSKQSVSTRSTKEAELVALDSAALEAEWLRDLLSDLPMLAKPIPAVLVY 1234
Query: 3844 RFSLAVIAKAKN-------------------*LISIGVIYIDWIESKENIA*PLTKGFFK 3966
+ +V+ K + GVI +D+I+S+ N+A P TKG +
Sbjct: 1235 CDNTSVLLKVNSRKDNQKSSRHIRRRLDSCRHARETGVITVDYIKSERNLADPFTKGLAQ 1294
Query: 3967 EVVRIASKGMGL 4002
+ ++ A GMGL
Sbjct: 1295 KPIQAACMGMGL 1306
Score = 56.6 bits (135), Expect(5) = 3e-72
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Frame = +1
Query: 1696 VESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTLLYN*LG 1875
V++K KPF ++ PLELI + EM+ ++KG ++ + +
Sbjct: 487 VQAKQPRKPFHTVEGRSTTPLELIHSDICEMNGI---IIKGGKRYFLTLIDDATRFCYIY 543
Query: 1876 VRMIP*KP*E----YKLEIESEVYVTTKLVRSKHDGKYEIHMLN------GIIHEIVSPY 2025
+ + E YK E+E+++ K +RS G+Y ++ + GIIHE +PY
Sbjct: 544 LLRTKDEALEHFKIYKTEVENQLDKKIKRLRSDRGGEYLSNLFDEYCKECGIIHETTAPY 603
Query: 2026 SP*SNGIVERKSRIIKEMIYAML 2094
SP SNG+ ERK+R + ++ A+L
Sbjct: 604 SPQSNGVAERKNRTVCDLANALL 626
Score = 47.4 bits (111), Expect(5) = 3e-72
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD-----------------YEKIYNLLMHTSKCGG- 2243
W E VL CY+LNRV + + Y+ K+ L K G
Sbjct: 636 WGEAVLTVCYVLNRVPPRNREATPYEGFKGRKPDLSHLRTWGCLAKVNVPLPKKRKLGPK 695
Query: 2244 ----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V + + AYRFLVV S+ S+ V VI ESRD FFE ++
Sbjct: 696 TVDCVFLGYAHNSAAYRFLVVHSETSEIAVNVIMESRDVTFFESIF 741
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 123 bits (309), Expect(5) = 3e-68
Identities = 79/201 (39%), Positives = 111/201 (55%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
+NE DK +Y + VIVCLYVDDMLI ++ +I STK ++ + L
Sbjct: 939 INECDKCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVIL 998
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + L +L ++++ + A TP D + L KNKG VS +EYSR+
Sbjct: 999 GIKIKRTSBELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRI 1058
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM M+C P+IAY +SKLSRY + +H + RVL YL+++ + L Y R PAV
Sbjct: 1059 IGSLMYLMSCTRPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAV 1118
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG DANW + K+SK SG
Sbjct: 1119 LEGYSDANWISNVKDSKSHSG 1139
Score = 90.1 bits (222), Expect(5) = 3e-68
Identities = 59/131 (45%), Positives = 75/131 (57%), Gaps = 18/131 (13%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL V WK SKQ A+ MESE IALDK E AE LR FLED +PVP I IH
Sbjct: 1142 FTLGGAAVSWKSSKQXVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIH 1201
Query: 3844 RFSLAVIAKAKN------------------*LISIGVIYIDWIESKENIA*PLTKGFFKE 3969
S + I +A++ L+S GVI +D+++SK+NIA PLTKG +E
Sbjct: 1202 CDSQSAIGRAQSNMYNGKSRHIXRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRE 1261
Query: 3970 VVRIASKGMGL 4002
+V +S+GM L
Sbjct: 1262 LVEKSSRGMXL 1272
Score = 80.5 bits (197), Expect(5) = 3e-68
Identities = 43/79 (54%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS +TRI+S M++ AA+ NLEIHQ+DVK F N +LD+ IY+EQPE F G E K
Sbjct: 848 TYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFLNGDLDEEIYMEQPEGFSAPGQEKKV 907
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 908 CKLVKSLYGLKQAPKQWHE 926
Score = 29.6 bits (65), Expect(5) = 3e-68
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 2629 NHTWELASLPLGSKTI 2676
NHTWEL LPLG K +
Sbjct: 794 NHTWELVBLPLGCKPL 809
Score = 28.9 bits (63), Expect(5) = 3e-68
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K +FKRK KVDG+++KY+
Sbjct: 812 KWIFKRKMKVDGSIDKYK 829
Score = 65.5 bits (158), Expect(2) = 2e-14
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 9/147 (6%)
Frame = +1
Query: 1681 KIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTLL 1860
K E VE+K F ++V+ N++PL+LI + ++ +T+ G V +
Sbjct: 504 KCETCVEAKLTRSSF-QSVERNTEPLDLIHSDICDLKFVQTR---GGNKYFITFVDDSTK 559
Query: 1861 YN*LGVRMIP*KP*E----YKLEIESEVYVTTKLVRSKHDGKYE-----IHMLNGIIHEI 2013
Y + + + E YK E+E+++ K++RS G+YE I +GIIHE
Sbjct: 560 YCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHET 619
Query: 2014 VSPYSP*SNGIVERKSRIIKEMIYAML 2094
+PYSP SNG+ ERK+R +KEM+ AML
Sbjct: 620 TTPYSPQSNGVAERKNRTLKEMMNAML 646
Score = 44.7 bits (104), Expect(2) = 2e-14
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Frame = +3
Query: 2103 ITQNLWEEVVL*FCYILNRVTFKGWDKN----------SYDYEKIYNLLMHTS------- 2231
+ QN+W E +L Y+LN+V K +K SY Y +++ L +
Sbjct: 651 LPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKV 710
Query: 2232 KCGG-----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
K G + I + AYRFLV S+ D I ESR+A FFE V+
Sbjct: 711 KIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVF 761
Score = 52.0 bits (123), Expect(2) = 2e-06
Identities = 23/60 (38%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +3
Query: 1146 MMSEVILI-TNVRDGWVDSGATKYVC*NRDLFTSYQRIRDVEKLNMSNSSATEVA*NGKV 1322
++SEV L+ +N ++ W+D+GAT++VC ++ +F++++ I + EK+ M NS+ +E+ GKV
Sbjct: 322 VVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKV 381
Score = 31.6 bits (70), Expect(2) = 2e-06
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 895 QAHVDEHKSSKADKGENIKHNSKRSLHKKGMFRKTESGITLIKGDCYVCKIPGHTAVKCR 1074
QA+ EH S K N K + K G+ +K + +G C+ C GH +V CR
Sbjct: 240 QANFVEHGQSSKAKTNNNKGKGSKLGPKGGISKKPK-----FQGKCFNCGKQGHKSVDCR 294
Query: 1075 QHK 1083
K
Sbjct: 295 LPK 297
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 114 bits (286), Expect(4) = 7e-68
Identities = 77/194 (39%), Positives = 105/194 (54%), Gaps = 5/194 (2%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
+NE DK +Y + VIVCLYVDDMLI ++ +I STK + ++ L L
Sbjct: 771 INECDKCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLQ----IQGLTSKDMGL 826
Query: 3237 RDED*KIIKHL*S*SFSLC*I-----VLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*L 3401
D I S L +L ++++ + A TP D + L KNKG VS +
Sbjct: 827 ADVILGIKIKRTSNELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQV 886
Query: 3402 EYSRVIGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYE 3581
EYSR+IG LM M+C P+IAY + KLSRY + +H + RVL YL+++ + L Y
Sbjct: 887 EYSRIIGSLMYLMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYT 946
Query: 3582 RCPAVLEGLYDANW 3623
R PAVLEG DANW
Sbjct: 947 RYPAVLEGYSDANW 960
Score = 98.6 bits (244), Expect(4) = 7e-68
Identities = 73/198 (36%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Frame = +2
Query: 2462 VDPRRSKMIITETSYGLNYIIFLY*SEFQTRKETITFIEITFR*EASFSEMDSVRQIILG 2641
V+PRRSK + TE S+G +++ F+ E QT KE + E EA SE+DS+ Q
Sbjct: 570 VEPRRSKRVRTEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTW 629
Query: 2642 SLLVYL*GVRPYD*MSL*EET*GRW---NCGKI*G*LXXXXXXXXXXXX--------ISS 2788
L+ G +P +W K+ G + +
Sbjct: 630 ELVDLPPGCKPLS---------SKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDT 680
Query: 2789 YSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKFC 2968
YS +TRI+S M++ AA+ NLEIHQ+DVK F N +LD+ IY+EQPE F G E K C
Sbjct: 681 YSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFLNGDLDEEIYMEQPEGFSAPGQEKKVC 740
Query: 2969 KLNKYLYDSK*ARK**HE 3022
KL K LY K A K HE
Sbjct: 741 KLVKSLYGLKQAPKQWHE 758
Score = 84.0 bits (206), Expect(4) = 7e-68
Identities = 54/118 (45%), Positives = 70/118 (59%), Gaps = 18/118 (15%)
Frame = +1
Query: 3703 KQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIHRFSLAVIAKAKN- 3879
KQT A+ MESE IALDK E AE LR FLED +PVP I IH S + I +A++
Sbjct: 974 KQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQSAIGRAQSN 1033
Query: 3880 -----------------*LISIGVIYIDWIESKENIA*PLTKGFFKEVVRIASKGMGL 4002
L+S GVI +D+++SK+NIA PLTKG +E+V +S+GMGL
Sbjct: 1034 MYNGKSRHIRRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRELVEKSSRGMGL 1091
Score = 34.3 bits (77), Expect(4) = 7e-68
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 2262 EYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
++ AYRFLV S+ D I ESR+A FFE V+
Sbjct: 504 KFYNAYRFLVYESNIPDIHKNTIMESRNASFFEDVF 539
Score = 52.0 bits (123), Expect(2) = 4e-06
Identities = 23/60 (38%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +3
Query: 1146 MMSEVILI-TNVRDGWVDSGATKYVC*NRDLFTSYQRIRDVEKLNMSNSSATEVA*NGKV 1322
++SEV L+ +N ++ W+D+GAT++VC ++ +F++++ I + EK+ M NS+ +E+ GKV
Sbjct: 243 VVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKV 302
Score = 30.0 bits (66), Expect(2) = 4e-06
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 895 QAHVDEHKSSKADKGENIKHNSKRSLHKKGMFRKTESGITLIKGDCYVCKIPGHTAVKCR 1074
+A+ EH S K N K + K G+ +K + +G C+ C GH +V CR
Sbjct: 161 KANFVEHGQSSKAKTNNNKGKGSKLGPKGGISKKPK-----FQGKCFNCGKQGHKSVDCR 215
Query: 1075 QHK 1083
K
Sbjct: 216 LPK 218
>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1452
Score = 115 bits (288), Expect(5) = 5e-67
Identities = 77/201 (38%), Positives = 108/201 (53%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI T+++VI K E L
Sbjct: 1118 VNEADKCVYYRYGGGEGVILCLYVDDILIFGTSLNVIEEVKDYLSKSDLGEADVILNIKL 1177
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ D I + S VL R+ DCKPA TPYD S +L+KN+ L YS++
Sbjct: 1178 QRGDEGGITLVQSHYVDK---VLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQI 1234
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++ +SKLSR+ + +H AL RV+ YLK ++++ + Y P V
Sbjct: 1235 IGSLMYLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKV 1294
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D+ E K SG
Sbjct: 1295 LEGYSDSNWISDADEIKATSG 1315
Score = 70.1 bits (170), Expect(5) = 5e-67
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Frame = +2
Query: 2462 VDPRRSKMIITETSYGLNYIIFLY*SEFQTRKETITFIEITFR*EASFSEMDSVR----- 2626
VD R+SK S+G +YI++L +T +E + + EA SEMDS+
Sbjct: 917 VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYLSPDADYWKEAVRSEMDSIMSNGTW 976
Query: 2627 QII--------LGSLLVYL*GVRPYD*MSL*EET*GRWNCGKI*G*LXXXXXXXXXXXXI 2782
+++ +G V+ +RP + T ++ +
Sbjct: 977 EVVERPYGCKPVGCKWVFKKKLRP-------DGTIEKYKARLV----AKGYTQKEGEDFF 1025
Query: 2783 SSYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENK 2962
+YS + R+++ +L+ AA + L +HQ+DVK F N EL++ IY++QP+ +V++G E
Sbjct: 1026 DTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGM 1085
Query: 2963 FCKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 1086 VCKLLKSLYGLKQAPKQWHE 1105
Score = 63.9 bits (154), Expect(5) = 5e-67
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Frame = +1
Query: 3661 SFTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISI 3840
+FTL G V WK KQT + ME+E ALD A AE LR L D + +PVPAI +
Sbjct: 1317 AFTLGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAEWLRELLMDLPVVEKPVPAILM 1376
Query: 3841 HRFSLAVIAKA-------------KN*LISI------GVIYIDWIESKENIA*PLTKGFF 3963
+ + VI K K L S+ GVI +D++++ N+A TKG
Sbjct: 1377 NCDNQTVIIKVNSSKDNMKSSRHIKRRLKSVRKQKNSGVIALDYVQTARNLADQFTKGLP 1436
Query: 3964 KEVVRIASKGMGL 4002
+ V+ AS+ MGL
Sbjct: 1437 RNVIDSASREMGL 1449
Score = 59.7 bits (143), Expect(5) = 5e-67
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Frame = +1
Query: 1678 TKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGS-L*LS*MIVRGT 1854
+K V+SK KP + N PLEL+ L EM+ TK K + L R
Sbjct: 617 SKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFC 676
Query: 1855 LLYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKYEIHMLN------G 1998
+Y ++ K YK E+E+++ K +RS G+Y + G
Sbjct: 677 YVY------LLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFG 730
Query: 1999 IIHEIVSPYSP*SNGIVERKSRIIKEMIYAML 2094
IIHE+ PYSP SNG+ ERK+R + EM+ AML
Sbjct: 731 IIHEMTPPYSPQSNGVAERKNRTLTEMVNAML 762
Score = 39.7 bits (91), Expect(5) = 5e-67
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Frame = +3
Query: 2103 ITQNLWEEVVL*FCYILNRVT--------FKGWDKNSYDYE---------KIYNLLMHTS 2231
+++ W E VL C++LN++ F+ W++ + K+ ++
Sbjct: 767 LSKEWWGEAVLTACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIVKKR 826
Query: 2232 KCGG-----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
K G V + + + YRFL+V S D I ESRDA FFE+ +
Sbjct: 827 KLGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMHAGTIFESRDATFFENEF 877
>ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]
Length = 2699
Score = 152 bits (385), Expect(5) = 2e-64
Identities = 90/201 (44%), Positives = 118/201 (58%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
+NESDK +Y CVIVCLYVDDMLI N DVIN TK ++ L L
Sbjct: 2417 INESDKCVYIKSNDKTCVIVCLYVDDMLIMGINKDVINKTKKMLNSSFDMKDLGQADVIL 2476
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L+R+ Q DCKPA+T +D C L+KNKG +S LEYS+V
Sbjct: 2477 GIQIKRNSEGYVLTQSHYPEKILRRFGQFDCKPAATSFDAGCKLEKNKGDAISQLEYSQV 2536
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM MN P++AY +S+LSRY + QEH DAL +VL YLK ++ + L Y + P +
Sbjct: 2537 IGSLMYLMNSTRPDLAYAVSRLSRYTSNPAQEHWDALVQVLRYLKNTLDYGLHYTKYPPI 2596
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
+EG DANW D+ ESK SG
Sbjct: 2597 VEGFSDANWISDTTESKSTSG 2617
Score = 82.0 bits (201), Expect(5) = 2e-64
Identities = 44/79 (55%), Positives = 55/79 (69%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS ++RI+S LI AA+ N +IHQ+DVK F N ELD+ IY+EQPE FV+KG E+K
Sbjct: 2326 TYSPVSRITSIRTLIAIAAVYNFDIHQMDVKTAFLNGELDEEIYMEQPEGFVLKGQESKV 2385
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 2386 CKLVKSLYGLKQAPKQWHE 2404
Score = 50.1 bits (118), Expect(5) = 2e-64
Identities = 32/72 (44%), Positives = 42/72 (58%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL + WK SKQ A+ ME E I LD A E AE L+ F+ED + + V AI IH
Sbjct: 2620 FTLGGAAISWKSSKQKCIARSTMEFEFITLDLAGEEAEWLKNFVEDIPMWPKLVTAICIH 2679
Query: 3844 RFSLAVIAKAKN 3879
S+A ++AK+
Sbjct: 2680 CDSMAAQSRAKS 2691
Score = 29.6 bits (65), Expect(5) = 2e-64
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 2629 NHTWELASLPLGSKTI 2676
N+TWEL LPLGSK I
Sbjct: 2272 NNTWELVDLPLGSKPI 2287
Score = 25.8 bits (55), Expect(5) = 2e-64
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K +FK+K K DGT++K++
Sbjct: 2290 KWIFKKKLKADGTIDKFK 2307
>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
Length = 839
Score = 137 bits (345), Expect(6) = 4e-59
Identities = 88/211 (41%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
+NE DKY+Y + VIVCLYVDDMLI +N DVI +TK ++L + ++
Sbjct: 602 INECDKYVYTRNTQSEYVIVCLYVDDMLIIGSNNDVIKATK---------KMLTNY-FDM 651
Query: 3237 RDED*-------KIIKHL*S*SFSLC*IV---LKRYNQCDCKPASTPYDYSCILKKNKGS 3386
+D KI K S C + LKR+NQ D P TP D + KN G
Sbjct: 652 KDMGVADVILGIKIAKTSSGLILSQCHYIEKILKRFNQYDDSPIKTPVDLNLHSTKNNGP 711
Query: 3387 GVS*LEYSRVIGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITF 3566
+ LEYSR+IG LM MNC +IAY ++KLSR+ + ++H L RVL YL+Y++ +
Sbjct: 712 AIDQLEYSRIIGSLMYVMNCMCLDIAYAVNKLSRFTNNMGKDHWKVLVRVLRYLRYTLNY 771
Query: 3567 YLIYERCPAVLEGLYDANWTVDSKESKFMSG 3659
L Y R P +LEG DANW D K+SK SG
Sbjct: 772 GLHYLRYPTLLEGYSDANWIFDMKDSKSTSG 802
Score = 75.9 bits (185), Expect(6) = 4e-59
Identities = 43/79 (54%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS +TRI+S +LI A++N EIHQ+DVK TF N EL++ IY+EQ E FV G E K
Sbjct: 512 TYSPVTRITSIRVLIAIVALHNFEIHQMDVKTTFLNGELEE-IYMEQSEGFVAPGQEKKV 570
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 571 CKLIKSLYGLKQAPKQWHE 589
Score = 45.8 bits (107), Expect(6) = 4e-59
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Frame = +3
Query: 2103 ITQNLWEEVVL*FCYILNRVTFKGWD----------KNSYDYEKIYNLLMH--------- 2225
+ QNLW E +L +ILN++ K D K SY Y K++ L
Sbjct: 307 LPQNLWREAILFANHILNKIPHKNKDVTSYELWKGHKPSYKYLKVWECLTKVVLQKPKQV 366
Query: 2226 -----TSKCGGV*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
T C + I + +AY FLV S D I ESR+A FFE+++
Sbjct: 367 KIGPKTIDC--IFIGYANNSSAYHFLVHKSSIPDIHEDTIIESRNASFFENIF 417
Score = 30.4 bits (67), Expect(6) = 4e-59
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKA 3762
FT+ + K SKQT A+ MESE IALDKA
Sbjct: 805 FTIGGVAISRKSSKQTCIARSTMESEFIALDKA 837
Score = 26.9 bits (58), Expect(6) = 4e-59
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 2465 DPRRSKMIITETSYGLNYIIFLY*SEFQTRKETITF 2572
+PR SK S+GL Y+ ++ +E +T KE + F
Sbjct: 444 EPRCSKRAKKTKSFGLEYLTYMLDNEPKTFKEAMIF 479
Score = 25.4 bits (54), Expect(6) = 4e-59
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 2688 VFKRKHKVDGTVEKYE 2735
+FK+K K DGT+ KY+
Sbjct: 478 IFKKKIKPDGTINKYK 493
Score = 55.5 bits (132), Expect(2) = 1e-11
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Frame = +1
Query: 1906 YKLEIESEVYVTTKLVRSKHDGKY-----EIHMLNGIIHEIVSPYSP*SNGIVERKSRII 2070
YK E+E+++ K ++S G+Y E +GIIH+ ++PYSP SN + E K+ +
Sbjct: 235 YKNEVENQLSKNIKAIKSDRGGEYDAPFGEFCSEHGIIHQTIAPYSPQSNSVAECKNLTL 294
Query: 2071 KEMIYAMLF-KG*PKTCGRRS--FSNFVIS*IE*PLKD 2175
KEM+ AML G P+ R + F+N +++ I KD
Sbjct: 295 KEMMNAMLISSGLPQNLWREAILFANHILNKIPHKNKD 332
Score = 45.8 bits (107), Expect(2) = 1e-11
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +3
Query: 1806 GGKR*FVTFIDDCTRYSLI*LIRGKDDSLEALR 1904
GGKR F+TFIDDCTRY + L+R KD++L+ +
Sbjct: 201 GGKRYFITFIDDCTRYYYVYLLRRKDEALDVFK 233
>ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975464 [Erythranthe
guttatus]
Length = 1203
Score = 125 bits (314), Expect(3) = 2e-58
Identities = 82/206 (39%), Positives = 115/206 (55%), Gaps = 5/206 (2%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
+NE DK +Y + V++CL VDDMLI +N ++I TK ++ + L
Sbjct: 243 INECDKCVYIKNTPNEFVLICLSVDDMLIMGSNHEIIVKTKKMLSTHFDMKDM-----GL 297
Query: 3237 RDE--D*KIIKHL*S*SFSLC*I---VLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*L 3401
D KIIK+ F+ VL+++ D PA+ P D L KN G V L
Sbjct: 298 ADVILGVKIIKNENGLVFTQSHYIEKVLRKFKMFDSPPATIPIDLKIHLAKNCGEPVDQL 357
Query: 3402 EYSRVIGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYE 3581
+YS++IG LM MNC P+IA+ +SKLSR+ + +H +AL+RVL YLKY++ L Y
Sbjct: 358 KYSQIIGSLMYVMNCTRPDIAHSVSKLSRFTSNPRNDHWNALTRVLRYLKYTLDLGLHYT 417
Query: 3582 RCPAVLEGLYDANWTVDSKESKFMSG 3659
R P+VLEG DANW D+K+ K SG
Sbjct: 418 RYPSVLEGYSDANWISDTKDYKSTSG 443
Score = 85.5 bits (210), Expect(3) = 2e-58
Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 3/189 (1%)
Frame = +2
Query: 2465 DPRRSKMIITETSYGLNYIIFLY*SEFQTRKETITFIEITFR*EASFSEMDSVRQIILGS 2644
+PRRS S+G ++ + ++ +T KE ++ E R EA SE+DS+ Q
Sbjct: 43 EPRRSTRAKIAKSFGPEFLTYTMENDPRTIKEALSTPEAPLRKEAINSEIDSIMQNHTWV 102
Query: 2645 LLVYL*GVRPYD*MSL*E---ET*GRWNCGKI*G*LXXXXXXXXXXXXISSYSALTRISS 2815
L+ G +P + + + G + K+ + +YS +TRI+S
Sbjct: 103 LVDLPPGNKPLGCKWILKRKYKADGSIDKYKV-RLVVKGFRQKEGLDFFDTYSPVTRITS 161
Query: 2816 FEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKFCKLNKYLYDS 2995
+L+ AA++NLE+HQ+DVK TF N EL++ IY+EQP+ V G E+K CKL K LY
Sbjct: 162 IRVLLAIAALHNLEVHQMDVKTTFLNGELEEEIYMEQPKGIVAHGQESKVCKLVKSLYGL 221
Query: 2996 K*ARK**HE 3022
K A K HE
Sbjct: 222 KQAPKQWHE 230
Score = 68.2 bits (165), Expect(3) = 2e-58
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 18/114 (15%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FT+ V WK +KQT A+ MESE IALDK AE R FLED ++PVP I IH
Sbjct: 446 FTIGGAAVSWKSTKQTCIARSTMESEFIALDKIGAEAEWPRNFLEDIPCWNKPVPTILIH 505
Query: 3844 RFSLAVIAKAKN------------------*LISIGVIYIDWIESKENIA*PLT 3951
S + I +A++ LIS G+I ID+++ K+N+A PLT
Sbjct: 506 CDSQSAIGRAQSSMYNGKSRHIRRRHNTIRQLISNGIISIDYVKFKDNLADPLT 559
>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
Length = 1264
Score = 117 bits (294), Expect(5) = 3e-55
Identities = 78/204 (38%), Positives = 113/204 (55%), Gaps = 3/204 (1%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
+NE+D+ +Y VI+CLYVDD+LI TNIDVIN K+ ++ L L
Sbjct: 927 INEADRCVYYRCGGGEGVILCLYVDDILIFGTNIDVINEVKSFLSKSFDMKDLGEADVIL 986
Query: 3237 RDED*KIIKHL*S*SFSLC*IV---LKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEY 3407
K+IK + S V LKR+ +CKP+ TPYD S L+KNK G+ L Y
Sbjct: 987 NI---KLIKADGGITLSQSHYVEKVLKRFGFSECKPSPTPYDPSVTLRKNKRIGLDQLRY 1043
Query: 3408 SRVIGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERC 3587
S+++G LM P+I++ +SKLSR+ + +H AL RV+ YL+ ++++ + Y
Sbjct: 1044 SQIVGSLMYLAGATRPDISFAVSKLSRFMSNPGTDHWHALERVMRYLQGTMSYGIHYSGQ 1103
Query: 3588 PAVLEGLYDANWTVDSKESKFMSG 3659
AVLEG D+NW D+ E SG
Sbjct: 1104 HAVLEGYSDSNWISDADELYATSG 1127
Score = 74.3 bits (181), Expect(5) = 3e-55
Identities = 40/79 (50%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA L +HQ+DVK F N ELD+ IY+EQP+ FVVKG E+K
Sbjct: 836 TYSPVARMTTIRVLLSLAASYGLLVHQMDVKTAFLNGELDEEIYMEQPDGFVVKGQESKV 895
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 896 CKLLKSLYGLKQAPKQWHE 914
Score = 66.2 bits (160), Expect(5) = 3e-55
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FT+ G V W+ KQT + ME+E ALD A AE LR L D + +P+PAI ++
Sbjct: 1130 FTIGGGAVSWRSCKQTILTRSTMEAELAALDTATVEAEWLRELLMDLPVVEKPIPAILMN 1189
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VIAK K L S+ GVI + +I + +N+A P TKG +
Sbjct: 1190 CDNQTVIAKVTSSKDNGKSSRHVKRRLKSVRKLRNSGVISVTYISTDKNLADPFTKGLPR 1249
Query: 3967 EVVRIASKGMGL 4002
V+ IAS+ MG+
Sbjct: 1250 NVIEIASREMGM 1261
Score = 28.1 bits (61), Expect(5) = 3e-55
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K K DGT+EKY+
Sbjct: 800 KWVFKKKLKPDGTIEKYK 817
Score = 22.7 bits (47), Expect(5) = 3e-55
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
SN TWE+ P G K +
Sbjct: 781 SNGTWEITDRPYGCKPV 797
Score = 58.9 bits (141), Expect(2) = 2e-13
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Frame = +1
Query: 1654 PNLVWTLITKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS 1833
PN+ +K V+SK KP + + PLELI L EM+ TK K ++
Sbjct: 418 PNITIVKGSKCHSCVQSKQPRKPHKAAEERHLAPLELIHSDLCEMNGVLTKGGKRYF-MT 476
Query: 1834 *MIVRGTLLYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKY------ 1977
+ Y V ++ K YK E+E+++ K +RS G++
Sbjct: 477 LIDDASRFCY----VYLLKTKDEALDYFKIYKAEVENQLERKIKRLRSDRGGEFFPKVFD 532
Query: 1978 EIHMLNGIIHEIVSPYSP*SNGIVERKSRIIKEMIYAMLFKG*PKTCG 2121
+ +GIIHE PYSP SNGI ERK+R + +++ AML TCG
Sbjct: 533 DFCAEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAML-----DTCG 575
Score = 47.8 bits (112), Expect(2) = 2e-13
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD----------YEKIYNLLMHTS-------KCGG- 2243
W E VL C++LNR+ +K Y+ Y + + + + K G
Sbjct: 581 WGEAVLTSCHVLNRIPMGKEEKTPYEKWVGRKPSLSYLRTWGCMAKVNVPINKKRKLGPR 640
Query: 2244 -V*IRFLEYPT---AYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V FL Y + AYRFLVV S+ D V I ESRDA FFEH++
Sbjct: 641 TVDCVFLGYASCSIAYRFLVVKSEVPDVYVDTIMESRDATFFEHIF 686
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 117 bits (292), Expect(4) = 3e-55
Identities = 76/203 (37%), Positives = 114/203 (56%), Gaps = 3/203 (1%)
Frame = +3
Query: 3060 NESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNLR 3239
N++DK +Y VI+CLYVDDMLI T D++ TK + ++ + L
Sbjct: 944 NDADKCVYSRSENGEYVIICLYVDDMLIFGTCNDIVFKTKLFLGSKFEMKDMGEASVILG 1003
Query: 3240 DED*KIIKHL*S*SFS---LC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYS 3410
KII+ S S +LK++ D K STPYD + LKKN+G +S +Y+
Sbjct: 1004 V---KIIRKGDSILLSQEKYTEKLLKKFGYYDFKSVSTPYDANSKLKKNRGESISQTQYA 1060
Query: 3411 RVIGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCP 3590
++IG L++ M+ P+IAY + +LSR Q+H +AL+R++ YL+ ++ + + Y P
Sbjct: 1061 QIIGSLLHLMSFSRPDIAYAVGRLSRCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFP 1120
Query: 3591 AVLEGLYDANWTVDSKESKFMSG 3659
AVLEG DANW DS E+K SG
Sbjct: 1121 AVLEGYSDANWISDSDETKSTSG 1143
Score = 73.2 bits (178), Expect(4) = 3e-55
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+++ +TRISS +L+ A+I+ L IHQ+DVK TF N EL++ IY+ QPE VV G + K
Sbjct: 852 TFAPVTRISSIRVLLALASIHKLVIHQMDVKTTFLNGELEEEIYMTQPEGCVVLGQKEKV 911
Query: 2966 CKLNKYLYDSK*ARK**HENL 3028
CKL K LY K A K HE L
Sbjct: 912 CKLLKSLYGLKQAPKQWHEKL 932
Score = 72.8 bits (177), Expect(4) = 3e-55
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 18/131 (13%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ ++QT A+ MESE +AL+ A AE L+ FL + L +P P++S+H
Sbjct: 1146 FTLGGGAVTWRSARQTIIARSTMESEFVALEMAGSEAEWLKNFLANIPLGMKPTPSVSMH 1205
Query: 3844 RFSLAVIAKAKN------------------*LISIGVIYIDWIESKENIA*PLTKGFFKE 3969
+ IA AKN L+ G I ID+++S+ ++A PLTK ++
Sbjct: 1206 CDCQSAIAIAKNKSYNGKNRHIQLRHNLVKQLLKSGTISIDYVKSERDLADPLTKPLGRK 1265
Query: 3970 VVRIASKGMGL 4002
++ S+GMGL
Sbjct: 1266 MILETSRGMGL 1276
Score = 25.8 bits (55), Expect(4) = 3e-55
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K +FK+K+ DG++EKY+
Sbjct: 816 KWIFKKKYHPDGSIEKYK 833
Score = 62.4 bits (150), Expect(3) = 2e-18
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = +1
Query: 1906 YKLEIESEVYVTTKLVRSKHDGKYEIH----MLNGIIHEIVSPYSP*SNGIVERKSRIIK 2073
YK E+E+++ K +RS G+Y + + GIIHE+ PYSP SNG+ ERK+R +K
Sbjct: 542 YKAEVENQLNKKIKRIRSDRGGEYVLFNDYCVKEGIIHEVTPPYSPESNGVAERKNRTLK 601
Query: 2074 EMIYAML 2094
EM+ AML
Sbjct: 602 EMMNAML 608
Score = 44.7 bits (104), Expect(3) = 2e-18
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Frame = +3
Query: 2112 NLWEEVVL*FCYILNRVTFKGWDKNSYDYEKIYN------------------------LL 2219
NLW E +L C++ NR+ + K Y+ K Y +
Sbjct: 616 NLWGESLLTACFLQNRIPHRKTGKTPYELWKGYQPNLKYLRVWGSLAKVMLPDPKKRKIG 675
Query: 2220 MHTSKCGGV*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
TS C + + + E+ AYRFLV+ SD + I E+++AEFFEH++
Sbjct: 676 SKTSDC--MFLGYAEHSAAYRFLVLNSDIIERNT--IVETKNAEFFEHIF 721
Score = 36.6 bits (83), Expect(3) = 2e-18
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 1806 GGKR*FVTFIDDCTRYSLI*LIRGKDDSLE 1895
GGK FVTFIDD +RY+ + LI+ KD++ +
Sbjct: 508 GGKNYFVTFIDDFSRYTKVYLIKHKDEAFD 537
Score = 51.2 bits (121), Expect(3) = 1e-06
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +3
Query: 1140 IDMMSEVILITNVRDGWVDSGATKYVC*NRDLFTSYQRIRD-VEKLNMSNSSATEVA*NG 1316
+ ++S+V L+TNV VDSGAT+++C NR++FTSY + D E++ + +S T V G
Sbjct: 307 VAVVSQVNLVTNVSKWVVDSGATRHICANRNVFTSYTSVGDGEEQVYLGDSRTTPVLGKG 366
Query: 1317 KV 1322
KV
Sbjct: 367 KV 368
Score = 30.8 bits (68), Expect(3) = 1e-06
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 1021 KGDCYVCKIPGHTAVKCR 1074
KG+C+VC PGH A +CR
Sbjct: 269 KGNCFVCGKPGHHAPQCR 286
Score = 20.8 bits (42), Expect(3) = 1e-06
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 1369 HVPSICKNIVSCSL 1410
HVPSI N+VS +L
Sbjct: 385 HVPSIRVNLVSVAL 398
>gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1197
Score = 119 bits (298), Expect(5) = 6e-55
Identities = 77/201 (38%), Positives = 110/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI TN++VIN K+ ++ L L
Sbjct: 860 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVIL 919
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L R+ D KP+ TPYD S +L+KNK + LEYS++
Sbjct: 920 NIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIAGNQLEYSQI 979
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++++SKLSR+ + +H AL RV+ YLK ++ L Y PAV
Sbjct: 980 IGSLMYLASATRPDISFVVSKLSRFTSNPGDDHWRALERVMCYLKGTVELGLHYTGYPAV 1039
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D E K SG
Sbjct: 1040 LEGYSDSNWISDVDEIKATSG 1060
Score = 72.8 bits (177), Expect(5) = 6e-55
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA + L +HQ+DVK F N ELD+ IY++QP+ FVV+G E K
Sbjct: 769 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 828
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 829 CKLLKSLYGLKQAPKQWHE 847
Score = 67.8 bits (164), Expect(5) = 6e-55
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ KQT + ME E ALD A AE LR L D + +PVPAI ++
Sbjct: 1063 FTLGGGAVSWRSCKQTILTRSTMEVELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMN 1122
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VI K K L S+ GVI +D+I++ N+A P TKG +
Sbjct: 1123 CDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSR 1182
Query: 3967 EVVRIASKGMGL 4002
V+ ASK MGL
Sbjct: 1183 NVINNASKEMGL 1194
Score = 26.9 bits (58), Expect(5) = 6e-55
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K + DGT+EKY+
Sbjct: 733 KWVFKKKLRPDGTIEKYK 750
Score = 21.2 bits (43), Expect(5) = 6e-55
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
+N TWE+ P G K +
Sbjct: 714 ANGTWEVTERPYGCKPV 730
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Frame = +1
Query: 1678 TKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTL 1857
+K V+SK KP + N PLEL+ L EM+ TK G +I T
Sbjct: 359 SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK--GGKRYFMTLIDDATR 416
Query: 1858 LYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKY---EIHML---NGI 2001
V ++ K YK E+E+++ K +RS G++ E + +GI
Sbjct: 417 FCY---VYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGI 473
Query: 2002 IHEIVSPYSP*SNGIVERKSRIIKEMIYAML 2094
IHE PYSP SNGI ERK+R + +++ AML
Sbjct: 474 IHERSPPYSPESNGIAERKNRTLTDLVNAML 504
Score = 41.6 bits (96), Expect(2) = 2e-10
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD----------YEKIYNLLMHTS-------KCGG- 2243
W E +L ++LNRV + DK Y+ Y + + L + K G
Sbjct: 514 WGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 573
Query: 2244 ----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V + + + AYRFL+V S+ D V I ESRDA FFE +
Sbjct: 574 TVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 619
>gb|AAS01934.1| putative Integrase core domain containing protein [Oryza sativa
Japonica Group]
Length = 1180
Score = 119 bits (298), Expect(5) = 6e-55
Identities = 77/201 (38%), Positives = 110/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI TN++VIN K+ ++ L L
Sbjct: 843 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVIL 902
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L R+ D KP+ TPYD S +L+KNK + LEYS++
Sbjct: 903 NIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIAGNQLEYSQI 962
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++++SKLSR+ + +H AL RV+ YLK ++ L Y PAV
Sbjct: 963 IGSLMYLASATRPDISFVVSKLSRFTSNPGDDHWRALERVMCYLKGTVELGLHYTGYPAV 1022
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D E K SG
Sbjct: 1023 LEGYSDSNWISDVDEIKATSG 1043
Score = 72.8 bits (177), Expect(5) = 6e-55
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA + L +HQ+DVK F N ELD+ IY++QP+ FVV+G E K
Sbjct: 752 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 811
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 812 CKLLKSLYGLKQAPKQWHE 830
Score = 67.8 bits (164), Expect(5) = 6e-55
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ KQT + ME E ALD A AE LR L D + +PVPAI ++
Sbjct: 1046 FTLGGGAVSWRSCKQTILTRSTMEVELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMN 1105
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VI K K L S+ GVI +D+I++ N+A P TKG +
Sbjct: 1106 CDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSR 1165
Query: 3967 EVVRIASKGMGL 4002
V+ ASK MGL
Sbjct: 1166 NVINNASKEMGL 1177
Score = 26.9 bits (58), Expect(5) = 6e-55
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K + DGT+EKY+
Sbjct: 716 KWVFKKKLRPDGTIEKYK 733
Score = 21.2 bits (43), Expect(5) = 6e-55
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
+N TWE+ P G K +
Sbjct: 697 ANGTWEVTERPYGCKPV 713
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Frame = +1
Query: 1678 TKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTL 1857
+K V+SK KP + N PLEL+ L EM+ TK G +I T
Sbjct: 342 SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK--GGKRYFMTLIDDATR 399
Query: 1858 LYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKY---EIHML---NGI 2001
V ++ K YK E+E+++ K +RS G++ E + +GI
Sbjct: 400 FCY---VYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGI 456
Query: 2002 IHEIVSPYSP*SNGIVERKSRIIKEMIYAML 2094
IHE PYSP SNGI ERK+R + +++ AML
Sbjct: 457 IHERSPPYSPESNGIAERKNRTLTDLVNAML 487
Score = 41.6 bits (96), Expect(2) = 2e-10
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD----------YEKIYNLLMHTS-------KCGG- 2243
W E +L ++LNRV + DK Y+ Y + + L + K G
Sbjct: 497 WGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 556
Query: 2244 ----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V + + + AYRFL+V S+ D V I ESRDA FFE +
Sbjct: 557 TVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 602
>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1095
Score = 117 bits (293), Expect(5) = 1e-54
Identities = 77/201 (38%), Positives = 109/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI TN++VIN K+ ++ L L
Sbjct: 758 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVIL 817
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L R+ D KP+ TPYD S +L+KNK + LEYS++
Sbjct: 818 NIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQI 877
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++ +SKLSR+ + +H AL RV+ YLK ++ L Y PAV
Sbjct: 878 IGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAV 937
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D E K SG
Sbjct: 938 LEGYSDSNWISDVDEIKATSG 958
Score = 72.8 bits (177), Expect(5) = 1e-54
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA + L +HQ+DVK F N ELD+ IY++QP+ FVV+G E K
Sbjct: 667 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 726
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 727 CKLLKSLYGLKQAPKQWHE 745
Score = 68.9 bits (167), Expect(5) = 1e-54
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ KQT + ME+E ALD A AE LR L D + +PVPAI ++
Sbjct: 961 FTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMN 1020
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VI K K L S+ GVI +D+I++ N+A P TKG +
Sbjct: 1021 CDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSR 1080
Query: 3967 EVVRIASKGMGL 4002
V+ ASK MGL
Sbjct: 1081 NVINNASKEMGL 1092
Score = 26.9 bits (58), Expect(5) = 1e-54
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K + DGT+EKY+
Sbjct: 631 KWVFKKKLRPDGTIEKYK 648
Score = 21.2 bits (43), Expect(5) = 1e-54
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
+N TWE+ P G K +
Sbjct: 612 ANGTWEVTERPYGCKPV 628
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Frame = +1
Query: 1678 TKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTL 1857
+K V+SK KP + N PLEL+ L EM+ TK G +I T
Sbjct: 257 SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK--GGKRYFMTLIDDATR 314
Query: 1858 LYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKY---EIHML---NGI 2001
V ++ K YK E+E+++ K +RS G++ E + +GI
Sbjct: 315 FCY---VYLLKTKDETLDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGI 371
Query: 2002 IHEIVSPYSP*SNGIVERKSRIIKEMIYAML 2094
IHE PYSP SNGI ERK+R + +++ AML
Sbjct: 372 IHERKPPYSPESNGIAERKNRTLTDLVNAML 402
Score = 41.6 bits (96), Expect(2) = 2e-10
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD----------YEKIYNLLMHTS-------KCGG- 2243
W E +L ++LNRV + DK Y+ Y + + L + K G
Sbjct: 412 WGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 471
Query: 2244 ----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V + + + AYRFL+V S+ D V I ESRDA FFE +
Sbjct: 472 TVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 517
>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 117 bits (293), Expect(5) = 2e-54
Identities = 77/201 (38%), Positives = 109/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI TN++VIN K+ ++ L L
Sbjct: 1160 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVIL 1219
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L R+ D KP+ TPYD S +L+KNK + LEYS++
Sbjct: 1220 NIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQI 1279
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++ +SKLSR+ + +H AL RV+ YLK ++ L Y PAV
Sbjct: 1280 IGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKDTVELGLHYTGYPAV 1339
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D E K SG
Sbjct: 1340 LEGYSDSNWISDVDEIKATSG 1360
Score = 72.8 bits (177), Expect(5) = 2e-54
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA + L +HQ+DVK F N ELD+ IY++QP+ FVV+G E K
Sbjct: 1069 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 1128
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 1129 CKLLKSLYGLKQAPKQWHE 1147
Score = 68.2 bits (165), Expect(5) = 2e-54
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ KQT + ME+E ALD A AE LR L D + +PVPAI ++
Sbjct: 1363 FTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMN 1422
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VI K K L S+ GVI +D+I++ N+A P TKG +
Sbjct: 1423 CDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSR 1482
Query: 3967 EVVRIASKGMGL 4002
V+ ASK MGL
Sbjct: 1483 NVIDNASKEMGL 1494
Score = 26.9 bits (58), Expect(5) = 2e-54
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K + DGT+EKY+
Sbjct: 1033 KWVFKKKLRPDGTIEKYK 1050
Score = 21.2 bits (43), Expect(5) = 2e-54
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
+N TWE+ P G K +
Sbjct: 1014 ANGTWEVTERPYGCKPV 1030
Score = 54.7 bits (130), Expect(2) = 3e-10
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Frame = +1
Query: 1678 TKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTL 1857
+K V+SK KP + N PLEL+ L EM+ T G +I T
Sbjct: 659 SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTNC--GKRYFMTLIDDATR 716
Query: 1858 LYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKY---EIHML---NGI 2001
V ++ K YK E+E+++ K +RS G++ E + +GI
Sbjct: 717 FCY---VYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGI 773
Query: 2002 IHEIVSPYSP*SNGIVERKSRIIKEMIYAML 2094
IHE PYSP SNGI ERK+R + +++ AML
Sbjct: 774 IHERTPPYSPESNGIAERKNRTLTDLVNAML 804
Score = 41.6 bits (96), Expect(2) = 3e-10
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD----------YEKIYNLLMHTS-------KCGG- 2243
W E +L ++LNRV + DK Y+ Y + + L + K G
Sbjct: 814 WGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 873
Query: 2244 ----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V + + + AYRFL+V S+ D V I ESRDA FFE +
Sbjct: 874 TVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 919
>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 117 bits (293), Expect(5) = 2e-54
Identities = 77/201 (38%), Positives = 109/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI TN++VIN K+ ++ L L
Sbjct: 1181 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVIL 1240
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L R+ D KP+ TPYD S +L+KNK + LEYS++
Sbjct: 1241 NIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQI 1300
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++ +SKLSR+ + +H AL RV+ YLK ++ L Y PAV
Sbjct: 1301 IGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAV 1360
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D E K SG
Sbjct: 1361 LEGYSDSNWISDVDEIKATSG 1381
Score = 72.8 bits (177), Expect(5) = 2e-54
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA + L +HQ+DVK F N ELD+ IY++QP+ FVV+G E K
Sbjct: 1090 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 1149
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 1150 CKLLKSLYGLKQAPKQWHE 1168
Score = 68.2 bits (165), Expect(5) = 2e-54
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ KQT + ME+E ALD A AE LR L D + +PVPAI ++
Sbjct: 1384 FTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMN 1443
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VI K K L S+ GVI +D+I++ N+A P TKG +
Sbjct: 1444 CDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSR 1503
Query: 3967 EVVRIASKGMGL 4002
V+ ASK MGL
Sbjct: 1504 NVIDNASKEMGL 1515
Score = 26.9 bits (58), Expect(5) = 2e-54
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K + DGT+EKY+
Sbjct: 1054 KWVFKKKLRPDGTIEKYK 1071
Score = 21.2 bits (43), Expect(5) = 2e-54
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
+N TWE+ P G K +
Sbjct: 1035 ANGTWEVTERPYGCKPV 1051
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Frame = +1
Query: 1678 TKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTL 1857
+K V+SK KP + N PLEL+ L EM+ TK G +I T
Sbjct: 680 SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK--GGKRYFMTLIDDATR 737
Query: 1858 LYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKY---EIHML---NGI 2001
V ++ K YK E+E+++ K +RS G++ E + +GI
Sbjct: 738 FCY---VYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGI 794
Query: 2002 IHEIVSPYSP*SNGIVERKSRIIKEMIYAML 2094
IHE PYSP SNGI ERK+R + +++ AML
Sbjct: 795 IHERTPPYSPESNGIAERKNRTLTDLVNAML 825
Score = 41.6 bits (96), Expect(2) = 1e-10
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD----------YEKIYNLLMHTS-------KCGG- 2243
W E +L ++LNRV + DK Y+ Y + + L + K G
Sbjct: 835 WGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGPK 894
Query: 2244 ----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V + + + AYRFL+V S+ D V I ESRDA FFE +
Sbjct: 895 TVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 940
>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1391
Score = 117 bits (293), Expect(5) = 2e-54
Identities = 77/201 (38%), Positives = 109/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI TN++VIN K+ ++ L L
Sbjct: 1054 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVIL 1113
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L R+ D KP+ TPYD S +L+KNK + LEYS++
Sbjct: 1114 NIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQI 1173
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++ +SKLSR+ + +H AL RV+ YLK ++ L Y PAV
Sbjct: 1174 IGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAV 1233
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D E K SG
Sbjct: 1234 LEGYSDSNWISDVDEIKATSG 1254
Score = 72.8 bits (177), Expect(5) = 2e-54
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA + L +HQ+DVK F N ELD+ IY++QP+ FVV+G E K
Sbjct: 963 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 1022
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 1023 CKLLKSLYGLKQAPKQWHE 1041
Score = 68.2 bits (165), Expect(5) = 2e-54
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ KQT + ME+E ALD A AE LR L D + +PVPAI ++
Sbjct: 1257 FTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMN 1316
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VI K K L S+ GVI +D+I++ N+A P TKG +
Sbjct: 1317 CDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSR 1376
Query: 3967 EVVRIASKGMGL 4002
V+ ASK MGL
Sbjct: 1377 NVIDNASKEMGL 1388
Score = 26.9 bits (58), Expect(5) = 2e-54
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K + DGT+EKY+
Sbjct: 927 KWVFKKKLRPDGTIEKYK 944
Score = 21.2 bits (43), Expect(5) = 2e-54
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
+N TWE+ P G K +
Sbjct: 908 ANGTWEVTERPYGCKPV 924
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Frame = +1
Query: 1678 TKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTL 1857
+K V+SK KP + N PLEL+ L EM+ TK G +I T
Sbjct: 553 SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK--GGKRYFMTLIDDATR 610
Query: 1858 LYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKY---EIHML---NGI 2001
V ++ K YK E+E+++ K +RS G++ E + +GI
Sbjct: 611 FCY---VYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGI 667
Query: 2002 IHEIVSPYSP*SNGIVERKSRIIKEMIYAML 2094
IHE PYSP SNGI ERK+R + +++ AML
Sbjct: 668 IHERTPPYSPESNGIAERKNRTLTDLVNAML 698
Score = 41.2 bits (95), Expect(2) = 1e-10
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD----------YEKIYNLLMHTS-------KCGG- 2243
W E +L ++LNR+ + DK Y+ Y + + L + K G
Sbjct: 708 WGEALLTSNHVLNRIPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 767
Query: 2244 ----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V + + + AYRFL+V S+ D V I ESRDA FFE +
Sbjct: 768 TVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 813
>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
Length = 1319
Score = 117 bits (293), Expect(5) = 2e-54
Identities = 77/201 (38%), Positives = 109/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI TN++VIN K+ ++ L L
Sbjct: 965 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVIL 1024
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L R+ D KP+ TPYD S +L+KNK + LEYS++
Sbjct: 1025 NIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQI 1084
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++ +SKLSR+ + +H AL RV+ YLK ++ L Y PAV
Sbjct: 1085 IGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAV 1144
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D E K SG
Sbjct: 1145 LEGYSDSNWISDVDEIKATSG 1165
Score = 72.8 bits (177), Expect(5) = 2e-54
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA + L +HQ+DVK F N ELD+ IY++QP+ FVV+G E K
Sbjct: 874 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 933
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 934 CKLLKSLYGLKQAPKQWHE 952
Score = 68.2 bits (165), Expect(5) = 2e-54
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ KQT + ME+E ALD A AE LR L D + +PVPAI ++
Sbjct: 1168 FTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMN 1227
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VI K K L S+ GVI +D+I++ N+A P TKG +
Sbjct: 1228 CDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSR 1287
Query: 3967 EVVRIASKGMGL 4002
V+ ASK MGL
Sbjct: 1288 NVIDNASKEMGL 1299
Score = 26.9 bits (58), Expect(5) = 2e-54
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K + DGT+EKY+
Sbjct: 838 KWVFKKKLRPDGTIEKYK 855
Score = 21.2 bits (43), Expect(5) = 2e-54
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
+N TWE+ P G K +
Sbjct: 819 ANGTWEVTERPYGCKPV 835
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Frame = +1
Query: 1678 TKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTL 1857
+K V+SK KP + N PLEL+ L EM+ TK G +I T
Sbjct: 464 SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK--GGKRYFMTLIDDATR 521
Query: 1858 LYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKY---EIHML---NGI 2001
V ++ K YK E+E+++ K +RS G++ E + +GI
Sbjct: 522 FCY---VYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGI 578
Query: 2002 IHEIVSPYSP*SNGIVERKSRIIKEMIYAML 2094
IHE PYSP SNGI ERK+R + +++ AML
Sbjct: 579 IHERTPPYSPESNGIAERKNRTLTDLVNAML 609
Score = 41.6 bits (96), Expect(2) = 1e-10
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD----------YEKIYNLLMHTS-------KCGG- 2243
W E +L ++LNRV + DK Y+ Y + + L + K G
Sbjct: 619 WGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 678
Query: 2244 ----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V + + + AYRFL+V S+ D V I ESRDA FFE +
Sbjct: 679 TVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 724
>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
Length = 1314
Score = 117 bits (293), Expect(5) = 2e-54
Identities = 77/201 (38%), Positives = 109/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI TN++VIN K+ ++ L L
Sbjct: 937 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVIL 996
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L R+ D KP+ TPYD S +L+KNK + LEYS++
Sbjct: 997 NIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQI 1056
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++ +SKLSR+ + +H AL RV+ YLK ++ L Y PAV
Sbjct: 1057 IGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAV 1116
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D E K SG
Sbjct: 1117 LEGYSDSNWISDVDEIKATSG 1137
Score = 72.8 bits (177), Expect(5) = 2e-54
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA + L +HQ+DVK F N ELD+ IY++QP+ FVV+G E K
Sbjct: 846 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 905
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 906 CKLLKSLYGLKQAPKQWHE 924
Score = 68.2 bits (165), Expect(5) = 2e-54
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ KQT + ME+E ALD A AE LR L D + +PVPAI ++
Sbjct: 1140 FTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMN 1199
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VI K K L S+ GVI +D+I++ N+A P TKG +
Sbjct: 1200 CDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSR 1259
Query: 3967 EVVRIASKGMGL 4002
V+ ASK MGL
Sbjct: 1260 NVIDNASKEMGL 1271
Score = 26.9 bits (58), Expect(5) = 2e-54
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K + DGT+EKY+
Sbjct: 810 KWVFKKKLRPDGTIEKYK 827
Score = 21.2 bits (43), Expect(5) = 2e-54
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
+N TWE+ P G K +
Sbjct: 791 ANGTWEVTEQPYGCKPV 807
Score = 52.4 bits (124), Expect(2) = 3e-10
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Frame = +1
Query: 1678 TKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTL 1857
+K V+SK KP + N PLEL+ L EM+ TK K ++ +
Sbjct: 436 SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYF-MTFIDDATRF 494
Query: 1858 LYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKY---EIHML---NGI 2001
Y V ++ K YK E+E+++ K +RS G++ E + +GI
Sbjct: 495 CY----VYLLKKKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGI 550
Query: 2002 IHEIVSPYSP*SNGIVERKSRIIKEMIYAML 2094
IHE PYSP SNGI ERK+ + +++ AML
Sbjct: 551 IHERTPPYSPESNGIAERKNCTLTDLVNAML 581
Score = 43.9 bits (102), Expect(2) = 3e-10
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD----------YEKIYNLLMHTS-------KCGG- 2243
W EV+L ++LNRV + DK Y+ Y + + L + K G
Sbjct: 591 WGEVLLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 650
Query: 2244 ----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V + + + AYRFL+V S+ D V +I ESRDA FFE +
Sbjct: 651 TVDCVFLGYAHHSIAYRFLIVKSEVLDMHVGIIMESRDATFFESFF 696
>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1302
Score = 117 bits (293), Expect(5) = 2e-54
Identities = 77/201 (38%), Positives = 109/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI TN++VIN K+ ++ L L
Sbjct: 965 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVIL 1024
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L R+ D KP+ TPYD S +L+KNK + LEYS++
Sbjct: 1025 NIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQI 1084
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++ +SKLSR+ + +H AL RV+ YLK ++ L Y PAV
Sbjct: 1085 IGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAV 1144
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D E K SG
Sbjct: 1145 LEGYSDSNWISDVDEIKATSG 1165
Score = 72.8 bits (177), Expect(5) = 2e-54
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA + L +HQ+DVK F N ELD+ IY++QP+ FVV+G E K
Sbjct: 874 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 933
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 934 CKLLKSLYGLKQAPKQWHE 952
Score = 68.2 bits (165), Expect(5) = 2e-54
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ KQT + ME+E ALD A AE LR L D + +PVPAI ++
Sbjct: 1168 FTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMN 1227
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VI K K L S+ GVI +D+I++ N+A P TKG +
Sbjct: 1228 CDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSR 1287
Query: 3967 EVVRIASKGMGL 4002
V+ ASK MGL
Sbjct: 1288 NVIDNASKEMGL 1299
Score = 26.9 bits (58), Expect(5) = 2e-54
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K + DGT+EKY+
Sbjct: 838 KWVFKKKLRPDGTIEKYK 855
Score = 21.2 bits (43), Expect(5) = 2e-54
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
+N TWE+ P G K +
Sbjct: 819 ANGTWEVTERPYGCKPV 835
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Frame = +1
Query: 1678 TKIEFYVESKYAIKPFSKNVQSNSKPLELIQLGLVEMSSTRTKVVKGSL*LS*MIVRGTL 1857
+K V+SK KP + N PLEL+ L EM+ TK G +I T
Sbjct: 464 SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK--GGKRYFMTLIDDATR 521
Query: 1858 LYN*LGVRMIP*KP*E------YKLEIESEVYVTTKLVRSKHDGKY---EIHML---NGI 2001
V ++ K YK E+E+++ K +RS G++ E + +GI
Sbjct: 522 FCY---VYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGI 578
Query: 2002 IHEIVSPYSP*SNGIVERKSRIIKEMIYAML 2094
IHE PYSP SNGI ERK+R + +++ AML
Sbjct: 579 IHERTPPYSPESNGIAERKNRTLTDLVNAML 609
Score = 41.6 bits (96), Expect(2) = 1e-10
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Frame = +3
Query: 2118 WEEVVL*FCYILNRVTFKGWDKNSYD----------YEKIYNLLMHTS-------KCGG- 2243
W E +L ++LNRV + DK Y+ Y + + L + K G
Sbjct: 619 WGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGPK 678
Query: 2244 ----V*IRFLEYPTAYRFLVVCSDFSDFGVKVITESRDAEFFEHVY 2369
V + + + AYRFL+V S+ D V I ESRDA FFE +
Sbjct: 679 TVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 724
>gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1229
Score = 117 bits (292), Expect(5) = 2e-54
Identities = 77/201 (38%), Positives = 109/201 (54%)
Frame = +3
Query: 3057 VNESDKYIYK*LVKDACVIVCLYVDDMLIPNTNIDVINSTKTCTE*ER*LEILRPF*CNL 3236
VNE+DK +Y VI+CLYVDD+LI TN++VIN K+ ++ L L
Sbjct: 892 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLPQNFDMKDLGVADVIL 951
Query: 3237 RDED*KIIKHL*S*SFSLC*IVLKRYNQCDCKPASTPYDYSCILKKNKGSGVS*LEYSRV 3416
+ + + +L R+ D KP+ TPYD S +L+KNK + LEYS++
Sbjct: 952 NIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQI 1011
Query: 3417 IGCLMNFMNCKSPEIAYIMSKLSRYNCSTEQEHSDALSRVLWYLKYSITFYLIYERCPAV 3596
IG LM + P+I++ +SKLSR+ + +H AL RV+ YLK ++ L Y PAV
Sbjct: 1012 IGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAV 1071
Query: 3597 LEGLYDANWTVDSKESKFMSG 3659
LEG D+NW D E K SG
Sbjct: 1072 LEGYSDSNWISDVDEIKATSG 1092
Score = 73.2 bits (178), Expect(5) = 2e-54
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 2786 SYSALTRISSFEMLIYFAAINNLEIHQVDVKITF*NCELDK*IYIEQPEDFVVKGYENKF 2965
+YS + R+++ +L+ AA + L +HQ+DVK F N ELD+ IY++QP+ FVV+G E K
Sbjct: 801 TYSPVARLTTIHVLLSLAASHGLVVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 860
Query: 2966 CKLNKYLYDSK*ARK**HE 3022
CKL K LY K A K HE
Sbjct: 861 CKLLKSLYGLKQAPKQWHE 879
Score = 68.2 bits (165), Expect(5) = 2e-54
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Frame = +1
Query: 3664 FTLA*GFVFWKISKQTYTAQFIMESESIALDKAREGAECLRCFLEDNLLRHRPVPAISIH 3843
FTL G V W+ KQT + ME+E ALD A AE LR L D + +PVPAI ++
Sbjct: 1095 FTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMN 1154
Query: 3844 RFSLAVIAK-------------AKN*LISI------GVIYIDWIESKENIA*PLTKGFFK 3966
+ VI K K L S+ GVI +D+I++ N+A P TKG +
Sbjct: 1155 CDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSR 1214
Query: 3967 EVVRIASKGMGL 4002
V+ ASK MGL
Sbjct: 1215 NVIDNASKEMGL 1226
Score = 26.9 bits (58), Expect(5) = 2e-54
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 2682 K*VFKRKHKVDGTVEKYE 2735
K VFK+K + DGT+EKY+
Sbjct: 765 KWVFKKKLRPDGTIEKYK 782
Score = 21.2 bits (43), Expect(5) = 2e-54
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 2626 SNHTWELASLPLGSKTI 2676
+N TWE+ P G K +
Sbjct: 746 ANGTWEVTERPYGCKPV 762